Domain ID e4qcwN1

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  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: LIM domain-like
  • F: Ribosomal_S14
UID: 001323980
Type: Automatic domain
Parent: e2uubN1
Range: N:2-61
Ligands: MG ZN
PDB: 4qcw
PDB Description:
Species:

Structure of domain e4qcwN1

Domains in the same chain:

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e4qcwN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Domains in the same PDB:

e4qcwC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4qcwC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4qcwE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4qcwE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4qcwF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4qcwG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4qcwH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4qcwH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4qcwJ1 J:5-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4qcwK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4qcwL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4qcwN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4qcwO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4qcwP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4qcwR1 R:20-87 HTH HTH tri-helical
e4qcwT1 T:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4qcwN1 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qcwC1 N:x,y,z->C:X,Y,Z Ribosomal protein S3-C Interaction Interface Pymol
e4qcwC2 N:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol
e4qcwJ1 N:x,y,z->J:X,Y,Z Ribosomal protein S10 Interaction Interface Pymol