cmd.read_pdbstr("""\ ATOM 1 N LYS U 46 1.144 75.468 -26.412 1.00 0.93 \ ATOM 2 CA LYS U 46 0.828 75.482 -27.829 1.00 0.93 \ ATOM 3 C LYS U 46 1.594 74.386 -28.565 1.00 0.93 \ ATOM 4 O LYS U 46 2.803 74.225 -28.392 1.00 0.93 \ ATOM 5 CB LYS U 46 1.080 76.854 -28.443 1.00 0.93 \ ATOM 6 CG LYS U 46 1.916 77.789 -27.594 1.00 0.93 \ ATOM 7 CD LYS U 46 2.722 78.760 -28.436 1.00 0.93 \ ATOM 8 CE LYS U 46 1.842 79.840 -29.043 1.00 0.93 \ ATOM 9 NZ LYS U 46 1.134 79.338 -30.255 1.00 0.93 \ ATOM 10 N ARG U 47 0.882 73.614 -29.373 1.00 0.93 \ ATOM 11 CA ARG U 47 1.460 72.504 -30.132 1.00 0.93 \ ATOM 12 C ARG U 47 1.347 72.787 -31.623 1.00 0.93 \ ATOM 13 O ARG U 47 0.266 73.095 -32.128 1.00 0.93 \ ATOM 14 CB ARG U 47 0.729 71.227 -29.738 1.00 0.93 \ ATOM 15 CG ARG U 47 1.381 69.925 -30.162 1.00 0.93 \ ATOM 16 CD ARG U 47 0.321 68.847 -30.335 1.00 0.93 \ ATOM 17 NE ARG U 47 0.764 67.739 -31.170 1.00 0.93 \ ATOM 18 CZ ARG U 47 0.035 66.648 -31.388 1.00 0.93 \ ATOM 19 NH1 ARG U 47 -1.161 66.515 -30.834 1.00 0.93 \ ATOM 20 NH2 ARG U 47 0.509 65.684 -32.159 1.00 0.93 \ ATOM 21 N SER U 48 2.467 72.721 -32.330 1.00 -0.88 \ ATOM 22 CA SER U 48 2.510 73.015 -33.748 1.00 -0.88 \ ATOM 23 C SER U 48 1.664 72.079 -34.588 1.00 -0.88 \ ATOM 24 O SER U 48 1.646 70.867 -34.387 1.00 -0.88 \ ATOM 25 CB SER U 48 3.963 73.083 -34.211 1.00 -0.88 \ ATOM 26 OG SER U 48 4.657 74.045 -33.426 1.00 -0.88 \ ATOM 27 N VAL U 49 0.889 72.673 -35.488 1.00 -2.01 \ ATOM 28 CA VAL U 49 -0.086 71.980 -36.315 1.00 -2.01 \ ATOM 29 C VAL U 49 0.272 72.146 -37.785 1.00 -2.01 \ ATOM 30 O VAL U 49 -0.519 72.656 -38.570 1.00 -2.01 \ ATOM 31 CB VAL U 49 -1.499 72.544 -36.071 1.00 -2.01 \ ATOM 32 CG1 VAL U 49 -2.452 71.383 -35.814 1.00 -2.01 \ ATOM 33 CG2 VAL U 49 -1.558 73.503 -34.893 1.00 -2.01 \ ATOM 34 N LEU U 50 1.477 71.721 -38.140 1.00 0.93 \ ATOM 35 CA LEU U 50 1.969 71.868 -39.491 1.00 0.93 \ ATOM 36 C LEU U 50 1.586 70.806 -40.489 1.00 0.93 \ ATOM 37 O LEU U 50 1.535 71.102 -41.697 1.00 0.93 \ ATOM 38 CB LEU U 50 3.483 72.101 -39.463 1.00 0.93 \ ATOM 39 CG LEU U 50 4.083 73.059 -40.482 1.00 0.93 \ ATOM 40 CD1 LEU U 50 3.122 74.164 -40.887 1.00 0.93 \ ATOM 41 CD2 LEU U 50 5.364 73.667 -39.920 1.00 0.93 \ ATOM 42 N CYS U 51 1.475 69.541 -40.104 1.00 -0.90 \ ATOM 43 CA CYS U 51 1.376 68.460 -41.067 1.00 -0.90 \ ATOM 44 C CYS U 51 -0.015 67.889 -41.284 1.00 -0.90 \ ATOM 45 O CYS U 51 -1.020 68.377 -40.775 1.00 -0.90 \ ATOM 46 CB CYS U 51 2.358 67.343 -40.697 1.00 -0.90 \ ATOM 47 SG CYS U 51 1.756 66.135 -39.496 1.00 -0.90 \ ATOM 48 N ARG U 52 -0.042 66.795 -42.026 1.00 0.93 \ ATOM 49 CA ARG U 52 -1.174 65.975 -42.371 1.00 0.93 \ ATOM 50 C ARG U 52 -1.952 65.463 -41.163 1.00 0.93 \ ATOM 51 O ARG U 52 -3.113 65.068 -41.258 1.00 0.93 \ ATOM 52 CB ARG U 52 -0.629 64.739 -43.119 1.00 0.93 \ ATOM 53 CG ARG U 52 0.296 63.866 -42.271 1.00 0.93 \ ATOM 54 CD ARG U 52 0.668 62.629 -43.056 1.00 0.93 \ ATOM 55 NE ARG U 52 1.182 61.508 -42.279 1.00 0.93 \ ATOM 56 CZ ARG U 52 1.688 60.432 -42.893 1.00 0.93 \ ATOM 57 NH1 ARG U 52 1.719 60.404 -44.219 1.00 0.93 \ ATOM 58 NH2 ARG U 52 2.156 59.409 -42.205 1.00 0.93 \ ATOM 59 N GLU U 53 -1.267 65.366 -40.039 1.00 0.93 \ ATOM 60 CA GLU U 53 -1.767 64.873 -38.784 1.00 0.93 \ ATOM 61 C GLU U 53 -3.067 65.494 -38.307 1.00 0.93 \ ATOM 62 O GLU U 53 -3.856 64.803 -37.648 1.00 0.93 \ ATOM 63 CB GLU U 53 -0.704 64.978 -37.692 1.00 0.93 \ ATOM 64 CG GLU U 53 -0.635 66.327 -37.006 1.00 0.93 \ ATOM 65 CD GLU U 53 0.462 66.390 -35.967 1.00 0.93 \ ATOM 66 OE1 GLU U 53 0.954 65.329 -35.534 1.00 0.93 \ ATOM 67 OE2 GLU U 53 0.823 67.521 -35.588 1.00 0.93 \ ATOM 68 N SER U 54 -3.314 66.776 -38.565 1.00 0.93 \ ATOM 69 CA SER U 54 -4.576 67.386 -38.136 1.00 0.93 \ ATOM 70 C SER U 54 -5.688 66.360 -38.352 1.00 0.93 \ ATOM 71 O SER U 54 -5.706 65.747 -39.424 1.00 0.93 \ ATOM 72 CB SER U 54 -4.909 68.637 -38.933 1.00 0.93 \ ATOM 73 OG SER U 54 -3.792 69.428 -39.266 1.00 0.93 \ ATOM 74 N LEU U 55 -6.508 66.115 -37.357 1.00 0.93 \ ATOM 75 CA LEU U 55 -7.637 65.201 -37.408 1.00 0.93 \ ATOM 76 C LEU U 55 -8.665 65.603 -36.343 1.00 0.93 \ ATOM 77 O LEU U 55 -9.336 64.745 -35.776 1.00 0.93 \ ATOM 78 CB LEU U 55 -7.254 63.744 -37.214 1.00 0.93 \ ATOM 79 CG LEU U 55 -6.195 63.092 -38.082 1.00 0.93 \ ATOM 80 CD1 LEU U 55 -5.653 61.827 -37.441 1.00 0.93 \ ATOM 81 CD2 LEU U 55 -6.659 62.843 -39.503 1.00 0.93 \ ATOM 82 N ARG U 56 -8.721 66.899 -36.047 1.00 -2.01 \ ATOM 83 CA ARG U 56 -9.670 67.414 -35.073 1.00 -2.01 \ ATOM 84 C ARG U 56 -10.848 68.142 -35.706 1.00 -2.01 \ ATOM 85 O ARG U 56 -10.708 69.082 -36.486 1.00 -2.01 \ ATOM 86 CB ARG U 56 -8.958 68.242 -34.004 1.00 -2.01 \ ATOM 87 CG ARG U 56 -8.654 67.451 -32.743 1.00 -2.01 \ ATOM 88 CD ARG U 56 -7.809 68.211 -31.745 1.00 -2.01 \ ATOM 89 NE ARG U 56 -6.798 67.360 -31.128 1.00 -2.01 \ ATOM 90 CZ ARG U 56 -6.214 67.565 -29.959 1.00 -2.01 \ ATOM 91 NH1 ARG U 56 -6.533 68.623 -29.228 1.00 -2.01 \ ATOM 92 NH2 ARG U 56 -5.303 66.713 -29.508 1.00 -2.01 \ ATOM 93 N GLY U 57 -12.042 67.657 -35.422 1.00 0.93 \ ATOM 94 CA GLY U 57 -13.349 68.139 -35.857 1.00 0.93 \ ATOM 95 C GLY U 57 -14.369 67.531 -34.891 1.00 0.93 \ ATOM 96 O GLY U 57 -14.112 66.420 -34.412 1.00 0.93 \ ATOM 97 N GLN U 58 -15.453 68.202 -34.537 1.00 -0.91 \ ATOM 98 CA GLN U 58 -16.304 67.643 -33.488 1.00 -0.91 \ ATOM 99 C GLN U 58 -17.630 67.057 -33.881 1.00 -0.91 \ ATOM 100 O GLN U 58 -18.384 67.657 -34.646 1.00 -0.91 \ ATOM 101 CB GLN U 58 -16.433 68.703 -32.380 1.00 -0.91 \ ATOM 102 CG GLN U 58 -15.086 69.125 -31.808 1.00 -0.91 \ ATOM 103 CD GLN U 58 -15.152 70.048 -30.618 1.00 -0.91 \ ATOM 104 OE1 GLN U 58 -16.219 70.549 -30.258 1.00 -0.91 \ ATOM 105 NE2 GLN U 58 -14.025 70.316 -29.960 1.00 -0.91 \ ATOM 106 N ALA U 59 -17.989 65.890 -33.328 1.00 0.93 \ ATOM 107 CA ALA U 59 -19.263 65.245 -33.614 1.00 0.93 \ ATOM 108 C ALA U 59 -19.390 63.860 -32.996 1.00 0.93 \ ATOM 109 O ALA U 59 -18.758 62.897 -33.437 1.00 0.93 \ ATOM 110 CB ALA U 59 -19.496 65.183 -35.119 1.00 0.93 \ ATOM 111 N ALA U 60 -20.093 63.778 -31.873 1.00 -0.90 \ ATOM 112 CA ALA U 60 -20.334 62.521 -31.171 1.00 -0.90 \ ATOM 113 C ALA U 60 -21.826 62.200 -31.165 1.00 -0.90 \ ATOM 114 O ALA U 60 -22.641 62.960 -31.697 1.00 -0.90 \ ATOM 115 CB ALA U 60 -19.808 62.593 -29.753 1.00 -0.90 \ ATOM 116 N GLY U 61 -22.216 61.086 -30.563 1.00 -0.88 \ ATOM 117 CA GLY U 61 -23.600 60.646 -30.526 1.00 -0.88 \ ATOM 118 C GLY U 61 -24.525 61.517 -29.693 1.00 -0.88 \ ATOM 119 O GLY U 61 -25.240 62.349 -30.258 1.00 -0.88 \ ATOM 120 N ARG U 62 -24.529 61.300 -28.379 1.00 -0.91 \ ATOM 121 CA ARG U 62 -25.378 62.068 -27.475 1.00 -0.91 \ ATOM 122 C ARG U 62 -24.718 63.375 -27.058 1.00 -0.91 \ ATOM 123 O ARG U 62 -25.295 64.455 -27.222 1.00 -0.91 \ ATOM 124 CB ARG U 62 -25.802 61.250 -26.263 1.00 -0.91 \ ATOM 125 CG ARG U 62 -26.919 61.853 -25.449 1.00 -0.91 \ ATOM 126 CD ARG U 62 -28.303 61.553 -25.946 1.00 -0.91 \ ATOM 127 NE ARG U 62 -28.476 60.339 -26.715 1.00 -0.91 \ ATOM 128 CZ ARG U 62 -28.939 59.181 -26.256 1.00 -0.91 \ ATOM 129 NH1 ARG U 62 -29.234 59.054 -24.975 1.00 -0.91 \ ATOM 130 NH2 ARG U 62 -29.085 58.158 -27.087 1.00 -0.91 \ ATOM 131 N PRO U 63 -23.500 63.285 -26.568 1.00 -0.91 \ ATOM 132 CA PRO U 63 -22.705 64.428 -26.157 1.00 -0.91 \ ATOM 133 C PRO U 63 -22.180 65.200 -27.364 1.00 -0.91 \ ATOM 134 O PRO U 63 -21.810 64.584 -28.362 1.00 -0.91 \ ATOM 135 CB PRO U 63 -21.487 63.868 -25.388 1.00 -0.91 \ ATOM 136 CG PRO U 63 -21.421 62.465 -25.928 1.00 -0.91 \ ATOM 137 CD PRO U 63 -22.789 62.016 -26.369 1.00 -0.91 \ ATOM 138 N LEU U 64 -22.180 66.521 -27.263 1.00 0.93 \ ATOM 139 CA LEU U 64 -21.573 67.412 -28.223 1.00 0.93 \ ATOM 140 C LEU U 64 -20.920 68.599 -27.510 1.00 0.93 \ ATOM 141 O LEU U 64 -21.629 69.390 -26.885 1.00 0.93 \ ATOM 142 CB LEU U 64 -22.569 68.038 -29.222 1.00 0.93 \ ATOM 143 CG LEU U 64 -21.856 69.221 -29.916 1.00 0.93 \ ATOM 144 CD1 LEU U 64 -20.728 68.669 -30.779 1.00 0.93 \ ATOM 145 CD2 LEU U 64 -22.765 70.154 -30.641 1.00 0.93 \ ATOM 146 N VAL U 65 -19.620 68.781 -27.716 1.00 0.93 \ ATOM 147 CA VAL U 65 -18.954 69.857 -26.986 1.00 0.93 \ ATOM 148 C VAL U 65 -19.304 69.675 -25.501 1.00 0.93 \ ATOM 149 O VAL U 65 -20.141 70.385 -24.934 1.00 0.93 \ ATOM 150 CB VAL U 65 -19.412 71.268 -27.380 1.00 0.93 \ ATOM 151 CG1 VAL U 65 -18.491 72.291 -26.721 1.00 0.93 \ ATOM 152 CG2 VAL U 65 -19.568 71.481 -28.866 1.00 0.93 \ ATOM 153 N ALA U 66 -18.706 68.659 -24.874 1.00 0.93 \ ATOM 154 CA ALA U 66 -18.953 68.454 -23.445 1.00 0.93 \ ATOM 155 C ALA U 66 -17.688 68.841 -22.668 1.00 0.93 \ ATOM 156 O ALA U 66 -16.627 68.259 -22.893 1.00 0.93 \ ATOM 157 CB ALA U 66 -19.392 67.072 -23.038 1.00 0.93 \ ATOM 158 N SER U 67 -17.831 69.826 -21.796 1.00 0.93 \ ATOM 159 CA SER U 67 -16.706 70.366 -21.032 1.00 0.93 \ ATOM 160 C SER U 67 -16.711 69.800 -19.625 1.00 0.93 \ ATOM 161 O SER U 67 -17.691 69.949 -18.901 1.00 0.93 \ ATOM 162 CB SER U 67 -16.836 71.891 -20.987 1.00 0.93 \ ATOM 163 OG SER U 67 -15.646 72.629 -20.911 1.00 0.93 \ ATOM 164 N VAL U 68 -15.639 69.141 -19.197 1.00 -0.91 \ ATOM 165 CA VAL U 68 -15.547 68.570 -17.865 1.00 -0.91 \ ATOM 166 C VAL U 68 -14.731 69.517 -16.967 1.00 -0.91 \ ATOM 167 O VAL U 68 -13.732 70.059 -17.421 1.00 -0.91 \ ATOM 168 CB VAL U 68 -14.806 67.223 -17.778 1.00 -0.91 \ ATOM 169 CG1 VAL U 68 -15.323 66.451 -16.575 1.00 -0.91 \ ATOM 170 CG2 VAL U 68 -14.751 66.393 -19.027 1.00 -0.91 \ ATOM 171 N SER U 69 -15.083 69.533 -15.707 1.00 -0.90 \ ATOM 172 CA SER U 69 -14.349 70.187 -14.626 1.00 -0.90 \ ATOM 173 C SER U 69 -14.385 69.168 -13.481 1.00 -0.90 \ ATOM 174 O SER U 69 -15.503 68.809 -13.103 1.00 -0.90 \ ATOM 175 CB SER U 69 -15.078 71.460 -14.192 1.00 -0.90 \ ATOM 176 OG SER U 69 -15.952 71.228 -13.109 1.00 -0.90 \ ATOM 177 N LEU U 70 -13.285 68.553 -13.098 1.00 -0.91 \ ATOM 178 CA LEU U 70 -13.387 67.556 -12.031 1.00 -0.91 \ ATOM 179 C LEU U 70 -12.381 68.010 -10.971 1.00 -0.91 \ ATOM 180 O LEU U 70 -11.338 68.513 -11.373 1.00 -0.91 \ ATOM 181 CB LEU U 70 -13.131 66.123 -12.417 1.00 -0.91 \ ATOM 182 CG LEU U 70 -12.014 65.325 -11.744 1.00 -0.91 \ ATOM 183 CD1 LEU U 70 -12.397 64.841 -10.357 1.00 -0.91 \ ATOM 184 CD2 LEU U 70 -11.703 64.144 -12.659 1.00 -0.91 \ ATOM 185 N ASN U 71 -12.711 67.764 -9.730 1.00 0.93 \ ATOM 186 CA ASN U 71 -11.873 67.941 -8.575 1.00 0.93 \ ATOM 187 C ASN U 71 -10.405 67.563 -8.741 1.00 0.93 \ ATOM 188 O ASN U 71 -9.539 68.248 -8.172 1.00 0.93 \ ATOM 189 CB ASN U 71 -12.465 67.118 -7.424 1.00 0.93 \ ATOM 190 CG ASN U 71 -11.855 67.574 -6.107 1.00 0.93 \ ATOM 191 OD1 ASN U 71 -11.133 68.568 -6.068 1.00 0.93 \ ATOM 192 ND2 ASN U 71 -12.180 66.807 -5.083 1.00 0.93 \ ATOM 193 N VAL U 72 -10.133 66.475 -9.457 1.00 -0.91 \ ATOM 194 CA VAL U 72 -8.782 66.079 -9.845 1.00 -0.91 \ ATOM 195 C VAL U 72 -8.519 66.484 -11.280 1.00 -0.91 \ ATOM 196 O VAL U 72 -8.379 67.708 -11.489 1.00 -0.91 \ ATOM 197 CB VAL U 72 -8.419 64.661 -9.450 1.00 -0.91 \ ATOM 198 CG1 VAL U 72 -6.930 64.606 -9.120 1.00 -0.91 \ ATOM 199 CG2 VAL U 72 -9.243 64.209 -8.246 1.00 -0.91 \ ATOM 200 N PRO U 73 -8.842 65.722 -12.315 1.00 0.93 \ ATOM 201 CA PRO U 73 -8.574 66.093 -13.700 1.00 0.93 \ ATOM 202 C PRO U 73 -9.383 67.236 -14.282 1.00 0.93 \ ATOM 203 O PRO U 73 -10.097 67.910 -13.536 1.00 0.93 \ ATOM 204 CB PRO U 73 -8.746 64.809 -14.530 1.00 0.93 \ ATOM 205 CG PRO U 73 -8.462 63.742 -13.504 1.00 0.93 \ ATOM 206 CD PRO U 73 -8.829 64.255 -12.148 1.00 0.93 \ ATOM 207 N ALA U 74 -9.297 67.543 -15.580 1.00 0.93 \ ATOM 208 CA ALA U 74 -10.045 68.619 -16.240 1.00 0.93 \ ATOM 209 C ALA U 74 -9.915 68.653 -17.754 1.00 0.93 \ ATOM 210 O ALA U 74 -8.793 68.452 -18.243 1.00 0.93 \ ATOM 211 CB ALA U 74 -9.639 69.953 -15.633 1.00 0.93 \ ATOM 212 N SER U 75 -10.944 68.927 -18.572 1.00 0.93 \ ATOM 213 CA SER U 75 -10.781 68.918 -20.030 1.00 0.93 \ ATOM 214 C SER U 75 -11.898 69.450 -20.922 1.00 0.93 \ ATOM 215 O SER U 75 -12.899 69.974 -20.449 1.00 0.93 \ ATOM 216 CB SER U 75 -10.661 67.418 -20.442 1.00 0.93 \ ATOM 217 OG SER U 75 -11.977 66.919 -20.706 1.00 0.93 \ ATOM 218 N VAL U 76 -11.739 69.271 -22.235 1.00 0.93 \ ATOM 219 CA VAL U 76 -12.679 69.656 -23.269 1.00 0.93 \ ATOM 220 C VAL U 76 -12.758 68.593 -24.364 1.00 0.93 \ ATOM 221 O VAL U 76 -11.753 68.314 -25.013 1.00 0.93 \ ATOM 222 CB VAL U 76 -12.394 71.017 -23.915 1.00 0.93 \ ATOM 223 CG1 VAL U 76 -12.809 71.076 -25.375 1.00 0.93 \ ATOM 224 CG2 VAL U 76 -13.193 72.075 -23.166 1.00 0.93 \ ATOM 225 N ARG U 77 -13.947 68.038 -24.572 1.00 0.93 \ ATOM 226 CA ARG U 77 -14.158 67.022 -25.583 1.00 0.93 \ ATOM 227 C ARG U 77 -15.217 67.436 -26.595 1.00 0.93 \ ATOM 228 O ARG U 77 -15.478 68.606 -26.877 1.00 0.93 \ ATOM 229 CB ARG U 77 -14.520 65.669 -24.984 1.00 0.93 \ ATOM 230 CG ARG U 77 -15.035 65.676 -23.564 1.00 0.93 \ ATOM 231 CD ARG U 77 -15.560 64.316 -23.146 1.00 0.93 \ ATOM 232 NE ARG U 77 -14.918 63.792 -21.953 1.00 0.93 \ ATOM 233 CZ ARG U 77 -15.545 63.165 -20.963 1.00 0.93 \ ATOM 234 NH1 ARG U 77 -16.858 62.985 -21.003 1.00 0.93 \ ATOM 235 NH2 ARG U 77 -14.840 62.723 -19.929 1.00 0.93 \ ATOM 236 N TYR U 78 -15.766 66.435 -27.276 1.00 -1.00 \ ATOM 237 CA TYR U 78 -16.866 66.667 -28.199 1.00 -1.00 \ ATOM 238 C TYR U 78 -17.895 65.561 -28.008 1.00 -1.00 \ ATOM 239 O TYR U 78 -17.988 65.024 -26.906 1.00 -1.00 \ ATOM 240 CB TYR U 78 -16.463 66.930 -29.609 1.00 -1.00 \ ATOM 241 CG TYR U 78 -16.016 65.860 -30.552 1.00 -1.00 \ ATOM 242 CD1 TYR U 78 -16.788 64.739 -30.810 1.00 -1.00 \ ATOM 243 CD2 TYR U 78 -14.811 65.954 -31.246 1.00 -1.00 \ ATOM 244 CE1 TYR U 78 -16.368 63.764 -31.688 1.00 -1.00 \ ATOM 245 CE2 TYR U 78 -14.390 64.989 -32.134 1.00 -1.00 \ ATOM 246 CZ TYR U 78 -15.180 63.889 -32.370 1.00 -1.00 \ ATOM 247 OH TYR U 78 -14.785 62.908 -33.252 1.00 -1.00 \ ATOM 248 OXT TYR U 78 -18.601 65.239 -28.962 1.00 -1.00 \ """, "e1bgyU1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1bgyU1_csv", state=0, origin=1) cmd.zoom("e1bgyU1_csv", animate=-1)