cmd.read_pdbstr("""\ ATOM 1 N MET B 1 6.288 41.923 0.159 1.00 -1.00 \ ATOM 2 CA MET B 1 6.248 41.766 -1.287 1.00 -1.00 \ ATOM 3 C MET B 1 6.092 40.316 -1.734 1.00 -1.00 \ ATOM 4 O MET B 1 5.869 40.048 -2.905 1.00 -1.00 \ ATOM 5 CB MET B 1 7.493 42.238 -1.944 1.00 -1.00 \ ATOM 6 CG MET B 1 7.686 43.720 -1.858 1.00 -1.00 \ ATOM 7 SD MET B 1 6.597 44.606 -2.965 1.00 -1.00 \ ATOM 8 CE MET B 1 7.276 44.233 -4.617 1.00 -1.00 \ ATOM 9 N VAL B 2 6.343 39.379 -0.857 1.00 0.49 \ ATOM 10 CA VAL B 2 6.324 37.971 -1.201 1.00 0.49 \ ATOM 11 C VAL B 2 5.270 37.272 -0.351 1.00 0.49 \ ATOM 12 O VAL B 2 5.350 37.286 0.880 1.00 0.49 \ ATOM 13 CB VAL B 2 7.723 37.366 -0.891 1.00 0.49 \ ATOM 14 CG1 VAL B 2 7.763 35.873 -1.151 1.00 0.49 \ ATOM 15 CG2 VAL B 2 8.819 38.078 -1.741 1.00 0.49 \ ATOM 16 N SER B 3 4.280 36.634 -0.985 1.00 0.49 \ ATOM 17 CA SER B 3 3.277 35.958 -0.181 1.00 0.49 \ ATOM 18 C SER B 3 3.860 34.725 0.495 1.00 0.49 \ ATOM 19 O SER B 3 4.853 34.136 0.030 1.00 0.49 \ ATOM 20 CB SER B 3 2.057 35.532 -0.991 1.00 0.49 \ ATOM 21 OG SER B 3 2.431 34.508 -1.920 1.00 0.49 \ ATOM 22 N LYS B 4 3.211 34.283 1.575 1.00 -1.97 \ ATOM 23 CA LYS B 4 3.626 33.059 2.250 1.00 -1.97 \ ATOM 24 C LYS B 4 3.597 31.907 1.289 1.00 -1.97 \ ATOM 25 O LYS B 4 4.500 31.037 1.297 1.00 -1.97 \ ATOM 26 CB LYS B 4 2.754 32.752 3.486 1.00 -1.97 \ ATOM 27 CG LYS B 4 2.808 33.828 4.572 1.00 -1.97 \ ATOM 28 CD LYS B 4 4.158 33.928 5.238 1.00 -1.97 \ ATOM 29 CE LYS B 4 4.188 34.878 6.429 1.00 -1.97 \ ATOM 30 NZ LYS B 4 5.419 34.701 7.209 1.00 -1.97 \ ATOM 31 N LEU B 5 2.544 31.836 0.430 1.00 0.49 \ ATOM 32 CA LEU B 5 2.445 30.720 -0.530 1.00 0.49 \ ATOM 33 C LEU B 5 3.561 30.758 -1.557 1.00 0.49 \ ATOM 34 O LEU B 5 4.124 29.703 -1.908 1.00 0.49 \ ATOM 35 CB LEU B 5 1.054 30.704 -1.216 1.00 0.49 \ ATOM 36 CG LEU B 5 0.890 29.615 -2.269 1.00 0.49 \ ATOM 37 CD1 LEU B 5 1.117 28.240 -1.645 1.00 0.49 \ ATOM 38 CD2 LEU B 5 -0.542 29.674 -2.821 1.00 0.49 \ ATOM 39 N SER B 6 3.859 31.951 -2.107 1.00 0.49 \ ATOM 40 CA SER B 6 4.884 32.025 -3.135 1.00 0.49 \ ATOM 41 C SER B 6 6.208 31.541 -2.546 1.00 0.49 \ ATOM 42 O SER B 6 6.993 30.809 -3.187 1.00 0.49 \ ATOM 43 CB SER B 6 5.009 33.454 -3.689 1.00 0.49 \ ATOM 44 OG SER B 6 5.851 33.449 -4.823 1.00 0.49 \ ATOM 45 N GLN B 7 6.509 32.054 -1.339 1.00 0.49 \ ATOM 46 CA GLN B 7 7.755 31.647 -0.676 1.00 0.49 \ ATOM 47 C GLN B 7 7.792 30.152 -0.455 1.00 0.49 \ ATOM 48 O GLN B 7 8.809 29.474 -0.723 1.00 0.49 \ ATOM 49 CB GLN B 7 7.913 32.405 0.654 1.00 0.49 \ ATOM 50 CG GLN B 7 9.194 31.963 1.395 1.00 0.49 \ ATOM 51 CD GLN B 7 10.448 32.496 0.768 1.00 0.49 \ ATOM 52 OE1 GLN B 7 10.416 33.322 -0.149 1.00 0.49 \ ATOM 53 NE2 GLN B 7 11.557 31.979 1.231 1.00 0.49 \ ATOM 54 N LEU B 8 6.679 29.589 0.037 1.00 0.49 \ ATOM 55 CA LEU B 8 6.616 28.161 0.304 1.00 0.49 \ ATOM 56 C LEU B 8 6.825 27.331 -0.997 1.00 0.49 \ ATOM 57 O LEU B 8 7.578 26.350 -1.030 1.00 0.49 \ ATOM 58 CB LEU B 8 5.278 27.794 0.998 1.00 0.49 \ ATOM 59 CG LEU B 8 5.095 26.286 1.323 1.00 0.49 \ ATOM 60 CD1 LEU B 8 6.175 25.838 2.316 1.00 0.49 \ ATOM 61 CD2 LEU B 8 3.719 26.104 2.001 1.00 0.49 \ ATOM 62 N GLN B 9 6.137 27.775 -2.091 1.00 0.49 \ ATOM 63 CA GLN B 9 6.272 27.066 -3.363 1.00 0.49 \ ATOM 64 C GLN B 9 7.703 27.044 -3.846 1.00 0.49 \ ATOM 65 O GLN B 9 8.222 26.026 -4.294 1.00 0.49 \ ATOM 66 CB GLN B 9 5.417 27.752 -4.436 1.00 0.49 \ ATOM 67 CG GLN B 9 3.886 27.526 -4.284 1.00 0.49 \ ATOM 68 CD GLN B 9 3.102 28.521 -5.116 1.00 0.49 \ ATOM 69 OE1 GLN B 9 3.637 29.552 -5.526 1.00 0.49 \ ATOM 70 NE2 GLN B 9 1.836 28.154 -5.429 1.00 0.49 \ ATOM 71 N THR B 10 8.347 28.205 -3.785 1.00 0.49 \ ATOM 72 CA THR B 10 9.748 28.315 -4.242 1.00 0.49 \ ATOM 73 C THR B 10 10.711 27.476 -3.402 1.00 0.49 \ ATOM 74 O THR B 10 11.631 26.860 -3.917 1.00 0.49 \ ATOM 75 CB THR B 10 10.195 29.759 -4.461 1.00 0.49 \ ATOM 76 OG1 THR B 10 10.090 30.486 -3.276 1.00 0.49 \ ATOM 77 CG2 THR B 10 9.291 30.405 -5.476 1.00 0.49 \ ATOM 78 N GLU B 11 10.509 27.492 -2.083 1.00 0.49 \ ATOM 79 CA GLU B 11 11.339 26.682 -1.189 1.00 0.49 \ ATOM 80 C GLU B 11 11.135 25.190 -1.476 1.00 0.49 \ ATOM 81 O GLU B 11 12.104 24.403 -1.522 1.00 0.49 \ ATOM 82 CB GLU B 11 11.043 27.034 0.292 1.00 0.49 \ ATOM 83 CG GLU B 11 11.543 28.423 0.757 1.00 0.49 \ ATOM 84 CD GLU B 11 13.048 28.455 0.893 1.00 0.49 \ ATOM 85 OE1 GLU B 11 13.654 27.697 1.634 1.00 0.49 \ ATOM 86 OE2 GLU B 11 13.663 29.244 0.047 1.00 0.49 \ ATOM 87 N MSE B 12 9.888 24.764 -1.649 1.00 -1.96 \ ATOM 88 CA MSE B 12 9.601 23.383 -1.953 1.00 -1.96 \ ATOM 89 C MSE B 12 10.244 22.948 -3.248 1.00 -1.96 \ ATOM 90 O MSE B 12 10.894 21.902 -3.287 1.00 -1.96 \ ATOM 91 CB MSE B 12 8.095 23.139 -1.932 1.00 -1.96 \ ATOM 92 CG MSE B 12 7.630 21.701 -2.163 1.00 -1.96 \ ATOM 93 SE MSE B 12 7.809 20.579 -0.696 1.00 -1.96 \ ATOM 94 CE MSE B 12 9.183 19.541 -1.366 1.00 -1.96 \ ATOM 95 N LEU B 13 10.094 23.729 -4.309 1.00 0.49 \ ATOM 96 CA LEU B 13 10.666 23.315 -5.580 1.00 0.49 \ ATOM 97 C LEU B 13 12.210 23.227 -5.509 1.00 0.49 \ ATOM 98 O LEU B 13 12.841 22.301 -6.011 1.00 0.49 \ ATOM 99 CB LEU B 13 10.185 24.282 -6.712 1.00 0.49 \ ATOM 100 CG LEU B 13 10.726 23.915 -8.130 1.00 0.49 \ ATOM 101 CD1 LEU B 13 10.338 22.504 -8.535 1.00 0.49 \ ATOM 102 CD2 LEU B 13 10.302 24.933 -9.213 1.00 0.49 \ ATOM 103 N ALA B 14 12.819 24.250 -4.900 1.00 -1.96 \ ATOM 104 CA ALA B 14 14.259 24.241 -4.784 1.00 -1.96 \ ATOM 105 C ALA B 14 14.724 23.005 -4.022 1.00 -1.96 \ ATOM 106 O ALA B 14 15.743 22.369 -4.394 1.00 -1.96 \ ATOM 107 CB ALA B 14 14.721 25.504 -4.088 1.00 -1.96 \ ATOM 108 N ALA B 15 14.029 22.653 -2.924 1.00 0.49 \ ATOM 109 CA ALA B 15 14.397 21.457 -2.155 1.00 0.49 \ ATOM 110 C ALA B 15 14.296 20.221 -3.002 1.00 0.49 \ ATOM 111 O ALA B 15 15.094 19.304 -2.892 1.00 0.49 \ ATOM 112 CB ALA B 15 13.491 21.313 -0.939 1.00 0.49 \ ATOM 113 N LEU B 16 13.276 20.162 -3.878 1.00 0.49 \ ATOM 114 CA LEU B 16 13.153 19.010 -4.732 1.00 0.49 \ ATOM 115 C LEU B 16 14.355 18.869 -5.642 1.00 0.49 \ ATOM 116 O LEU B 16 14.929 17.754 -5.845 1.00 0.49 \ ATOM 117 CB LEU B 16 11.854 19.001 -5.580 1.00 0.49 \ ATOM 118 CG LEU B 16 10.609 18.844 -4.705 1.00 0.49 \ ATOM 119 CD1 LEU B 16 9.369 19.133 -5.533 1.00 0.49 \ ATOM 120 CD2 LEU B 16 10.522 17.427 -4.174 1.00 0.49 \ ATOM 121 N LEU B 17 14.722 19.994 -6.253 1.00 0.49 \ ATOM 122 CA LEU B 17 15.849 19.964 -7.190 1.00 0.49 \ ATOM 123 C LEU B 17 17.116 19.536 -6.463 1.00 0.49 \ ATOM 124 O LEU B 17 17.930 18.771 -6.986 1.00 0.49 \ ATOM 125 CB LEU B 17 16.046 21.320 -7.890 1.00 0.49 \ ATOM 126 CG LEU B 17 14.846 21.763 -8.758 1.00 0.49 \ ATOM 127 CD1 LEU B 17 15.027 23.221 -9.225 1.00 0.49 \ ATOM 128 CD2 LEU B 17 14.624 20.855 -9.961 1.00 0.49 \ ATOM 129 N GLU B 18 17.292 20.052 -5.218 1.00 0.49 \ ATOM 130 CA GLU B 18 18.481 19.700 -4.414 1.00 0.49 \ ATOM 131 C GLU B 18 18.500 18.273 -4.010 1.00 0.49 \ ATOM 132 O GLU B 18 19.556 17.672 -3.784 1.00 0.49 \ ATOM 133 CB GLU B 18 18.695 20.686 -3.242 1.00 0.49 \ ATOM 134 CG GLU B 18 19.049 22.100 -3.772 1.00 0.49 \ ATOM 135 CD GLU B 18 19.103 23.207 -2.719 1.00 0.49 \ ATOM 136 OE1 GLU B 18 18.940 23.002 -1.535 1.00 0.49 \ ATOM 137 OE2 GLU B 18 19.380 24.406 -3.208 1.00 0.49 \ ATOM 138 N SER B 19 17.326 17.627 -4.017 1.00 0.49 \ ATOM 139 CA SER B 19 17.210 16.224 -3.685 1.00 0.49 \ ATOM 140 C SER B 19 17.533 15.318 -4.867 1.00 0.49 \ ATOM 141 O SER B 19 17.478 14.092 -4.772 1.00 0.49 \ ATOM 142 CB SER B 19 15.842 15.886 -3.075 1.00 0.49 \ ATOM 143 OG SER B 19 14.860 15.814 -4.142 1.00 0.49 \ ATOM 144 N GLY B 20 17.849 15.944 -6.023 1.00 0.49 \ ATOM 145 CA GLY B 20 18.236 15.154 -7.204 1.00 0.49 \ ATOM 146 C GLY B 20 17.164 14.955 -8.222 1.00 0.49 \ ATOM 147 O GLY B 20 17.367 14.183 -9.164 1.00 0.49 \ ATOM 148 N LEU B 21 16.032 15.664 -8.095 1.00 0.49 \ ATOM 149 CA LEU B 21 14.940 15.528 -9.047 1.00 0.49 \ ATOM 150 C LEU B 21 15.467 15.597 -10.480 1.00 0.49 \ ATOM 151 O LEU B 21 16.132 16.530 -10.831 1.00 0.49 \ ATOM 152 CB LEU B 21 13.934 16.660 -8.807 1.00 0.49 \ ATOM 153 CG LEU B 21 12.689 16.561 -9.663 1.00 0.49 \ ATOM 154 CD1 LEU B 21 11.792 15.450 -9.112 1.00 0.49 \ ATOM 155 CD2 LEU B 21 11.974 17.904 -9.582 1.00 0.49 \ ATOM 156 N SER B 22 15.050 14.637 -11.315 1.00 -1.97 \ ATOM 157 CA SER B 22 15.546 14.578 -12.695 1.00 -1.97 \ ATOM 158 C SER B 22 14.725 15.397 -13.645 1.00 -1.97 \ ATOM 159 O SER B 22 13.586 15.724 -13.352 1.00 -1.97 \ ATOM 160 CB SER B 22 15.616 13.163 -13.194 1.00 -1.97 \ ATOM 161 OG SER B 22 14.292 12.694 -13.303 1.00 -1.97 \ ATOM 162 N LYS B 23 15.311 15.652 -14.829 1.00 0.49 \ ATOM 163 CA LYS B 23 14.587 16.365 -15.858 1.00 0.49 \ ATOM 164 C LYS B 23 13.432 15.492 -16.389 1.00 0.49 \ ATOM 165 O LYS B 23 12.289 15.979 -16.640 1.00 0.49 \ ATOM 166 CB LYS B 23 15.478 16.898 -16.932 1.00 0.49 \ ATOM 167 CG LYS B 23 16.209 18.131 -16.437 1.00 0.49 \ ATOM 168 CD LYS B 23 17.389 18.462 -17.315 1.00 0.49 \ ATOM 169 CE LYS B 23 18.154 19.641 -16.787 1.00 0.49 \ ATOM 170 NZ LYS B 23 17.419 20.890 -17.015 1.00 0.49 \ ATOM 171 N GLU B 24 13.677 14.180 -16.441 1.00 0.49 \ ATOM 172 CA GLU B 24 12.597 13.305 -16.850 1.00 0.49 \ ATOM 173 C GLU B 24 11.422 13.401 -15.879 1.00 0.49 \ ATOM 174 O GLU B 24 10.248 13.382 -16.264 1.00 0.49 \ ATOM 175 CB GLU B 24 13.019 11.845 -17.062 1.00 0.49 \ ATOM 176 N ALA B 25 11.704 13.557 -14.576 1.00 -1.97 \ ATOM 177 CA ALA B 25 10.607 13.675 -13.608 1.00 -1.97 \ ATOM 178 C ALA B 25 9.815 14.983 -13.813 1.00 -1.97 \ ATOM 179 O ALA B 25 8.609 15.030 -13.625 1.00 -1.97 \ ATOM 180 CB ALA B 25 11.110 13.569 -12.176 1.00 -1.97 \ ATOM 181 N LEU B 26 10.500 16.058 -14.146 1.00 0.49 \ ATOM 182 CA LEU B 26 9.805 17.301 -14.404 1.00 0.49 \ ATOM 183 C LEU B 26 8.906 17.154 -15.615 1.00 0.49 \ ATOM 184 O LEU B 26 7.766 17.606 -15.592 1.00 0.49 \ ATOM 185 CB LEU B 26 10.808 18.435 -14.624 1.00 0.49 \ ATOM 186 CG LEU B 26 11.488 18.940 -13.343 1.00 0.49 \ ATOM 187 CD1 LEU B 26 12.758 19.692 -13.699 1.00 0.49 \ ATOM 188 CD2 LEU B 26 10.544 19.853 -12.517 1.00 0.49 \ ATOM 189 N ILE B 27 9.409 16.518 -16.670 1.00 0.49 \ ATOM 190 CA ILE B 27 8.619 16.265 -17.908 1.00 0.49 \ ATOM 191 C ILE B 27 7.344 15.514 -17.575 1.00 0.49 \ ATOM 192 O ILE B 27 6.233 15.881 -17.973 1.00 0.49 \ ATOM 193 CB ILE B 27 9.441 15.492 -19.009 1.00 0.49 \ ATOM 194 CG1 ILE B 27 10.640 16.287 -19.511 1.00 0.49 \ ATOM 195 CG2 ILE B 27 8.564 14.940 -20.160 1.00 0.49 \ ATOM 196 CD1 ILE B 27 10.262 17.505 -20.303 1.00 0.49 \ ATOM 197 N GLN B 28 7.488 14.455 -16.801 1.00 -1.97 \ ATOM 198 CA GLN B 28 6.316 13.692 -16.416 1.00 -1.97 \ ATOM 199 C GLN B 28 5.300 14.498 -15.643 1.00 -1.97 \ ATOM 200 O GLN B 28 4.096 14.351 -15.832 1.00 -1.97 \ ATOM 201 CB GLN B 28 6.714 12.427 -15.666 1.00 -1.97 \ ATOM 202 N ALA B 29 5.765 15.324 -14.700 1.00 0.49 \ ATOM 203 CA ALA B 29 4.856 16.104 -13.867 1.00 0.49 \ ATOM 204 C ALA B 29 4.067 17.113 -14.695 1.00 0.49 \ ATOM 205 O ALA B 29 2.938 17.519 -14.353 1.00 0.49 \ ATOM 206 CB ALA B 29 5.628 16.819 -12.750 1.00 0.49 \ ATOM 207 N LEU B 30 4.718 17.562 -15.760 1.00 0.49 \ ATOM 208 CA LEU B 30 4.161 18.536 -16.657 1.00 0.49 \ ATOM 209 C LEU B 30 3.234 17.864 -17.645 1.00 0.49 \ ATOM 210 O LEU B 30 2.493 18.613 -18.288 1.00 0.49 \ ATOM 211 CB LEU B 30 5.238 19.278 -17.424 1.00 0.49 \ ATOM 212 CG LEU B 30 5.942 20.335 -16.555 1.00 0.49 \ ATOM 213 CD1 LEU B 30 7.292 20.731 -17.153 1.00 0.49 \ ATOM 214 CD2 LEU B 30 5.057 21.568 -16.413 1.00 0.49 \ """, "e1g2yB1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1g2yB1_csv", state=0, origin=1) cmd.zoom("e1g2yB1_csv", animate=-1)