cmd.read_pdbstr("""\ ATOM 1 N VAL D 2 -2.045 -1.929 13.582 1.00 0.44 \ ATOM 2 CA VAL D 2 -2.114 -3.418 13.718 1.00 0.44 \ ATOM 3 C VAL D 2 -0.810 -3.975 14.277 1.00 0.44 \ ATOM 4 O VAL D 2 0.278 -3.489 13.986 1.00 0.44 \ ATOM 5 CB VAL D 2 -2.437 -4.076 12.363 1.00 0.44 \ ATOM 6 N SER D 3 -0.936 -5.038 15.050 1.00 0.44 \ ATOM 7 CA SER D 3 0.194 -5.659 15.711 1.00 0.44 \ ATOM 8 C SER D 3 0.927 -6.741 14.913 1.00 0.44 \ ATOM 9 O SER D 3 0.428 -7.242 13.900 1.00 0.44 \ ATOM 10 CB SER D 3 -0.321 -6.286 16.985 1.00 0.44 \ ATOM 11 OG SER D 3 -1.247 -7.308 16.631 1.00 0.44 \ ATOM 12 N LYS D 4 2.117 -7.082 15.364 1.00 -2.20 \ ATOM 13 CA LYS D 4 2.888 -8.140 14.733 1.00 -2.20 \ ATOM 14 C LYS D 4 2.093 -9.458 14.836 1.00 -2.20 \ ATOM 15 O LYS D 4 2.039 -10.229 13.874 1.00 -2.20 \ ATOM 16 CB LYS D 4 4.251 -8.295 15.416 1.00 -2.20 \ ATOM 17 CG LYS D 4 5.211 -7.128 15.171 1.00 -2.20 \ ATOM 18 CD LYS D 4 5.552 -7.099 13.708 1.00 -2.20 \ ATOM 19 CE LYS D 4 6.662 -6.117 13.358 1.00 -2.20 \ ATOM 20 NZ LYS D 4 7.025 -6.231 11.906 1.00 -2.20 \ ATOM 21 N LEU D 5 1.454 -9.690 15.968 1.00 0.44 \ ATOM 22 CA LEU D 5 0.631 -10.880 16.152 1.00 0.44 \ ATOM 23 C LEU D 5 -0.561 -10.912 15.209 1.00 0.44 \ ATOM 24 O LEU D 5 -0.776 -11.917 14.541 1.00 0.44 \ ATOM 25 CB LEU D 5 0.134 -10.976 17.613 1.00 0.44 \ ATOM 26 CG LEU D 5 -0.811 -12.155 17.881 1.00 0.44 \ ATOM 27 CD1 LEU D 5 -0.144 -13.480 17.449 1.00 0.44 \ ATOM 28 CD2 LEU D 5 -1.208 -12.156 19.378 1.00 0.44 \ ATOM 29 N SER D 6 -1.318 -9.829 15.115 0.50 0.44 \ ATOM 30 CA SER D 6 -2.469 -9.827 14.221 0.50 0.44 \ ATOM 31 C SER D 6 -2.042 -10.032 12.770 0.50 0.44 \ ATOM 32 O SER D 6 -2.693 -10.745 12.021 0.50 0.44 \ ATOM 33 CB SER D 6 -3.228 -8.506 14.330 0.50 0.44 \ ATOM 34 OG SER D 6 -3.885 -8.404 15.571 0.50 0.44 \ ATOM 35 N GLN D 7 -0.918 -9.451 12.384 1.00 0.44 \ ATOM 36 CA GLN D 7 -0.427 -9.585 11.018 1.00 0.44 \ ATOM 37 C GLN D 7 -0.023 -11.025 10.777 1.00 0.44 \ ATOM 38 O GLN D 7 -0.285 -11.611 9.713 1.00 0.44 \ ATOM 39 CB GLN D 7 0.793 -8.692 10.807 1.00 0.44 \ ATOM 40 CG GLN D 7 1.545 -8.934 9.475 1.00 0.44 \ ATOM 41 CD GLN D 7 2.652 -7.897 9.243 1.00 0.44 \ ATOM 42 OE1 GLN D 7 3.617 -7.808 10.011 1.00 0.44 \ ATOM 43 NE2 GLN D 7 2.499 -7.108 8.189 1.00 0.44 \ ATOM 44 N LEU D 8 0.680 -11.626 11.710 1.00 0.44 \ ATOM 45 CA LEU D 8 1.135 -13.009 11.553 1.00 0.44 \ ATOM 46 C LEU D 8 -0.107 -13.913 11.483 1.00 0.44 \ ATOM 47 O LEU D 8 -0.190 -14.809 10.638 1.00 0.44 \ ATOM 48 CB LEU D 8 1.991 -13.366 12.746 1.00 0.44 \ ATOM 49 CG LEU D 8 2.482 -14.813 12.787 1.00 0.44 \ ATOM 50 CD1 LEU D 8 3.256 -15.202 11.532 1.00 0.44 \ ATOM 51 CD2 LEU D 8 3.401 -14.961 14.010 1.00 0.44 \ ATOM 52 N GLN D 9 -1.112 -13.706 12.324 1.00 0.44 \ ATOM 53 CA GLN D 9 -2.318 -14.532 12.252 1.00 0.44 \ ATOM 54 C GLN D 9 -2.976 -14.402 10.909 1.00 0.44 \ ATOM 55 O GLN D 9 -3.381 -15.368 10.310 1.00 0.44 \ ATOM 56 CB GLN D 9 -3.295 -14.085 13.322 1.00 0.44 \ ATOM 57 CG GLN D 9 -2.917 -14.436 14.741 1.00 0.44 \ ATOM 58 CD GLN D 9 -3.790 -13.705 15.796 1.00 0.44 \ ATOM 59 OE1 GLN D 9 -4.347 -12.638 15.527 1.00 0.44 \ ATOM 60 NE2 GLN D 9 -3.888 -14.272 16.989 1.00 0.44 \ ATOM 61 N THR D 10 -3.089 -13.183 10.421 1.00 0.44 \ ATOM 62 CA THR D 10 -3.787 -12.903 9.162 1.00 0.44 \ ATOM 63 C THR D 10 -3.102 -13.542 7.993 1.00 0.44 \ ATOM 64 O THR D 10 -3.723 -14.195 7.131 1.00 0.44 \ ATOM 65 CB THR D 10 -3.928 -11.381 8.955 1.00 0.44 \ ATOM 66 OG1 THR D 10 -4.687 -10.864 10.041 1.00 0.44 \ ATOM 67 CG2 THR D 10 -4.594 -11.012 7.605 1.00 0.44 \ ATOM 68 N GLU D 11 -1.798 -13.377 7.936 1.00 0.44 \ ATOM 69 CA GLU D 11 -1.051 -13.911 6.806 1.00 0.44 \ ATOM 70 C GLU D 11 -0.968 -15.429 6.877 1.00 0.44 \ ATOM 71 O GLU D 11 -0.972 -16.108 5.835 1.00 0.44 \ ATOM 72 CB GLU D 11 0.338 -13.310 6.743 1.00 0.44 \ ATOM 73 CG GLU D 11 0.315 -11.799 6.365 1.00 0.44 \ ATOM 74 CD GLU D 11 -0.433 -11.460 5.078 1.00 0.44 \ ATOM 75 OE1 GLU D 11 -0.226 -12.128 4.077 1.00 0.44 \ ATOM 76 OE2 GLU D 11 -1.226 -10.517 5.114 1.00 0.44 \ ATOM 77 N LEU D 12 -0.863 -15.963 8.105 0.50 0.44 \ ATOM 78 CA LEU D 12 -0.826 -17.418 8.338 0.50 0.44 \ ATOM 79 C LEU D 12 -2.147 -18.011 7.853 0.50 0.44 \ ATOM 80 O LEU D 12 -2.140 -19.011 7.092 0.50 0.44 \ ATOM 81 CB LEU D 12 -0.674 -17.738 9.840 0.50 0.44 \ ATOM 82 CG LEU D 12 -0.310 -19.188 10.227 0.50 0.44 \ ATOM 83 CD1 LEU D 12 1.054 -19.530 9.712 0.50 0.44 \ ATOM 84 CD2 LEU D 12 -0.255 -19.348 11.732 0.50 0.44 \ ATOM 85 N LEU D 13 -3.294 -17.427 8.211 1.00 0.44 \ ATOM 86 CA LEU D 13 -4.592 -17.962 7.850 1.00 0.44 \ ATOM 87 C LEU D 13 -4.758 -17.876 6.374 1.00 0.44 \ ATOM 88 O LEU D 13 -5.202 -18.847 5.715 1.00 0.44 \ ATOM 89 CB LEU D 13 -5.747 -17.230 8.554 1.00 0.44 \ ATOM 90 CG LEU D 13 -7.139 -17.783 8.318 1.00 0.44 \ ATOM 91 CD1 LEU D 13 -7.228 -19.221 8.800 1.00 0.44 \ ATOM 92 CD2 LEU D 13 -8.082 -16.869 9.095 1.00 0.44 \ ATOM 93 N ALA D 14 -4.391 -16.748 5.740 1.00 -2.19 \ ATOM 94 CA ALA D 14 -4.562 -16.654 4.284 1.00 -2.19 \ ATOM 95 C ALA D 14 -3.723 -17.725 3.583 1.00 -2.19 \ ATOM 96 O ALA D 14 -4.165 -18.324 2.583 1.00 -2.19 \ ATOM 97 CB ALA D 14 -4.164 -15.254 3.759 1.00 -2.19 \ ATOM 98 N ALA D 15 -2.498 -17.966 4.017 1.00 0.44 \ ATOM 99 CA ALA D 15 -1.650 -18.966 3.375 1.00 0.44 \ ATOM 100 C ALA D 15 -2.276 -20.352 3.583 1.00 0.44 \ ATOM 101 O ALA D 15 -2.209 -21.207 2.670 1.00 0.44 \ ATOM 102 CB ALA D 15 -0.278 -18.926 3.936 1.00 0.44 \ ATOM 103 N LEU D 16 -2.817 -20.627 4.774 1.00 0.44 \ ATOM 104 CA LEU D 16 -3.466 -21.914 4.982 1.00 0.44 \ ATOM 105 C LEU D 16 -4.610 -22.082 3.980 1.00 0.44 \ ATOM 106 O LEU D 16 -4.792 -23.166 3.429 1.00 0.44 \ ATOM 107 CB LEU D 16 -3.995 -21.977 6.424 1.00 0.44 \ ATOM 108 CG LEU D 16 -2.941 -22.249 7.493 1.00 0.44 \ ATOM 109 CD1 LEU D 16 -3.454 -22.094 8.923 1.00 0.44 \ ATOM 110 CD2 LEU D 16 -2.477 -23.683 7.283 1.00 0.44 \ ATOM 111 N LEU D 17 -5.437 -21.078 3.794 1.00 0.44 \ ATOM 112 CA LEU D 17 -6.543 -21.194 2.845 1.00 0.44 \ ATOM 113 C LEU D 17 -6.041 -21.482 1.452 1.00 0.44 \ ATOM 114 O LEU D 17 -6.585 -22.370 0.740 1.00 0.44 \ ATOM 115 CB LEU D 17 -7.409 -19.934 2.807 1.00 0.44 \ ATOM 116 CG LEU D 17 -8.310 -19.730 4.023 1.00 0.44 \ ATOM 117 CD1 LEU D 17 -8.993 -18.361 3.950 1.00 0.44 \ ATOM 118 CD2 LEU D 17 -9.349 -20.811 4.072 1.00 0.44 \ ATOM 119 N GLU D 18 -4.978 -20.785 1.061 1.00 0.44 \ ATOM 120 CA GLU D 18 -4.475 -21.011 -0.280 1.00 0.44 \ ATOM 121 C GLU D 18 -3.927 -22.377 -0.436 1.00 0.44 \ ATOM 122 O GLU D 18 -3.970 -22.925 -1.545 1.00 0.44 \ ATOM 123 CB GLU D 18 -3.416 -19.998 -0.603 1.00 0.44 \ ATOM 124 CG GLU D 18 -4.015 -18.806 -1.240 1.00 0.44 \ ATOM 125 CD GLU D 18 -3.017 -18.080 -2.090 1.00 0.44 \ ATOM 126 OE1 GLU D 18 -2.087 -17.530 -1.487 1.00 0.44 \ ATOM 127 OE2 GLU D 18 -3.150 -18.076 -3.340 1.00 0.44 \ ATOM 128 N SER D 19 -3.455 -22.996 0.623 1.00 0.44 \ ATOM 129 CA SER D 19 -2.910 -24.321 0.545 1.00 0.44 \ ATOM 130 C SER D 19 -4.006 -25.373 0.522 1.00 0.44 \ ATOM 131 O SER D 19 -3.666 -26.549 0.393 1.00 0.44 \ ATOM 132 CB SER D 19 -2.018 -24.561 1.769 1.00 0.44 \ ATOM 133 OG SER D 19 -2.741 -24.897 3.008 1.00 0.44 \ ATOM 134 N GLY D 20 -5.263 -24.966 0.656 1.00 0.44 \ ATOM 135 CA GLY D 20 -6.380 -25.928 0.614 1.00 0.44 \ ATOM 136 C GLY D 20 -7.035 -26.228 1.946 1.00 0.44 \ ATOM 137 O GLY D 20 -7.825 -27.194 2.009 1.00 0.44 \ ATOM 138 N LEU D 21 -6.803 -25.447 3.008 1.00 0.44 \ ATOM 139 CA LEU D 21 -7.460 -25.700 4.300 1.00 0.44 \ ATOM 140 C LEU D 21 -8.954 -25.839 4.050 1.00 0.44 \ ATOM 141 O LEU D 21 -9.573 -24.983 3.447 1.00 0.44 \ ATOM 142 CB LEU D 21 -7.235 -24.555 5.277 1.00 0.44 \ ATOM 143 CG LEU D 21 -7.779 -24.779 6.719 1.00 0.44 \ ATOM 144 CD1 LEU D 21 -6.964 -25.845 7.435 1.00 0.44 \ ATOM 145 CD2 LEU D 21 -7.756 -23.447 7.442 1.00 0.44 \ ATOM 146 N SER D 22 -9.526 -26.947 4.524 1.00 -2.20 \ ATOM 147 CA SER D 22 -10.943 -27.214 4.258 1.00 -2.20 \ ATOM 148 C SER D 22 -11.985 -26.471 5.075 1.00 -2.20 \ ATOM 149 O SER D 22 -11.733 -25.994 6.168 1.00 -2.20 \ ATOM 150 CB SER D 22 -11.235 -28.691 4.451 1.00 -2.20 \ ATOM 151 OG SER D 22 -11.168 -28.982 5.823 1.00 -2.20 \ ATOM 152 N LYS D 23 -13.191 -26.398 4.518 1.00 0.44 \ ATOM 153 CA LYS D 23 -14.338 -25.791 5.182 1.00 0.44 \ ATOM 154 C LYS D 23 -14.591 -26.556 6.495 1.00 0.44 \ ATOM 155 O LYS D 23 -14.882 -25.941 7.498 1.00 0.44 \ ATOM 156 CB LYS D 23 -15.575 -25.896 4.295 1.00 0.44 \ ATOM 157 CG LYS D 23 -15.455 -25.218 2.959 1.00 0.44 \ ATOM 158 CD LYS D 23 -15.474 -23.720 3.115 1.00 0.44 \ ATOM 159 CE LYS D 23 -15.416 -23.050 1.767 1.00 0.44 \ ATOM 160 NZ LYS D 23 -15.435 -21.573 1.869 1.00 0.44 \ ATOM 161 N GLU D 24 -14.462 -27.878 6.492 1.00 0.44 \ ATOM 162 CA GLU D 24 -14.660 -28.687 7.685 1.00 0.44 \ ATOM 163 C GLU D 24 -13.694 -28.274 8.790 1.00 0.44 \ ATOM 164 O GLU D 24 -14.054 -28.206 9.958 1.00 0.44 \ ATOM 165 CB GLU D 24 -14.447 -30.181 7.374 1.00 0.44 \ ATOM 166 CG GLU D 24 -15.444 -30.801 6.375 1.00 0.44 \ ATOM 167 CD GLU D 24 -15.471 -30.121 5.007 1.00 0.44 \ ATOM 168 OE1 GLU D 24 -14.400 -29.945 4.381 1.00 0.44 \ ATOM 169 OE2 GLU D 24 -16.582 -29.770 4.546 1.00 0.44 \ ATOM 170 N ALA D 25 -12.431 -28.021 8.418 1.00 -2.20 \ ATOM 171 CA ALA D 25 -11.445 -27.618 9.411 1.00 -2.20 \ ATOM 172 C ALA D 25 -11.805 -26.277 10.019 1.00 -2.20 \ ATOM 173 O ALA D 25 -11.680 -26.076 11.216 1.00 -2.20 \ ATOM 174 CB ALA D 25 -10.068 -27.585 8.785 1.00 -2.20 \ ATOM 175 N LEU D 26 -12.290 -25.373 9.179 1.00 0.44 \ ATOM 176 CA LEU D 26 -12.683 -24.038 9.664 1.00 0.44 \ ATOM 177 C LEU D 26 -13.948 -24.110 10.569 1.00 0.44 \ ATOM 178 O LEU D 26 -14.027 -23.406 11.600 1.00 0.44 \ ATOM 179 CB LEU D 26 -12.957 -23.112 8.498 1.00 0.44 \ ATOM 180 CG LEU D 26 -11.722 -22.661 7.723 1.00 0.44 \ ATOM 181 CD1 LEU D 26 -12.163 -22.004 6.461 1.00 0.44 \ ATOM 182 CD2 LEU D 26 -10.929 -21.682 8.538 1.00 0.44 \ ATOM 183 N ILE D 27 -14.892 -24.980 10.202 1.00 0.44 \ ATOM 184 CA ILE D 27 -16.122 -25.156 10.983 1.00 0.44 \ ATOM 185 C ILE D 27 -15.750 -25.801 12.327 1.00 0.44 \ ATOM 186 O ILE D 27 -16.212 -25.367 13.369 1.00 0.44 \ ATOM 187 CB ILE D 27 -17.122 -25.988 10.199 1.00 0.44 \ ATOM 188 CG1 ILE D 27 -17.663 -25.113 9.085 1.00 0.44 \ ATOM 189 CG2 ILE D 27 -18.230 -26.559 11.133 1.00 0.44 \ ATOM 190 CD1 ILE D 27 -18.360 -25.886 8.010 1.00 0.44 \ ATOM 191 N GLN D 28 -14.843 -26.784 12.308 1.00 -2.20 \ ATOM 192 CA GLN D 28 -14.378 -27.448 13.529 1.00 -2.20 \ ATOM 193 C GLN D 28 -13.684 -26.405 14.419 1.00 -2.20 \ ATOM 194 O GLN D 28 -13.856 -26.390 15.638 1.00 -2.20 \ ATOM 195 CB GLN D 28 -13.380 -28.546 13.141 1.00 -2.20 \ ATOM 196 CG GLN D 28 -12.736 -29.316 14.261 1.00 -2.20 \ ATOM 197 CD GLN D 28 -11.606 -30.195 13.733 1.00 -2.20 \ ATOM 198 OE1 GLN D 28 -11.783 -30.934 12.763 1.00 -2.20 \ ATOM 199 NE2 GLN D 28 -10.449 -30.111 14.359 1.00 -2.20 \ ATOM 200 N ALA D 29 -12.894 -25.536 13.794 1.00 0.44 \ ATOM 201 CA ALA D 29 -12.186 -24.483 14.518 1.00 0.44 \ ATOM 202 C ALA D 29 -13.165 -23.522 15.162 1.00 0.44 \ ATOM 203 O ALA D 29 -12.954 -23.117 16.302 1.00 0.44 \ ATOM 204 CB ALA D 29 -11.269 -23.712 13.596 1.00 0.44 \ ATOM 205 N LEU D 30 -14.235 -23.172 14.444 1.00 0.44 \ ATOM 206 CA LEU D 30 -15.236 -22.249 15.013 1.00 0.44 \ ATOM 207 C LEU D 30 -15.886 -22.923 16.202 1.00 0.44 \ ATOM 208 O LEU D 30 -16.144 -22.286 17.232 1.00 0.44 \ ATOM 209 CB LEU D 30 -16.307 -21.885 13.984 1.00 0.44 \ ATOM 210 CG LEU D 30 -15.898 -20.718 13.088 1.00 0.44 \ ATOM 211 CD1 LEU D 30 -16.758 -20.706 11.838 1.00 0.44 \ ATOM 212 CD2 LEU D 30 -15.993 -19.396 13.862 1.00 0.44 \ ATOM 213 N GLY D 31 -16.149 -24.222 16.066 1.00 0.44 \ ATOM 214 CA GLY D 31 -16.745 -24.954 17.164 1.00 0.44 \ ATOM 215 C GLY D 31 -15.669 -25.330 18.160 1.00 0.44 \ ATOM 216 O GLY D 31 -15.958 -25.400 19.371 1.00 0.44 \ """, "e1g39D1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1g39D1_csv", state=0, origin=1) cmd.zoom("e1g39D1_csv", animate=-1)