cmd.read_pdbstr("""\ ATOM 1 N SER A 1 28.840 1.463 -14.764 1.00 -1.00 \ ATOM 2 CA SER A 1 28.294 1.528 -13.377 1.00 -1.00 \ ATOM 3 C SER A 1 26.880 2.073 -13.422 1.00 -1.00 \ ATOM 4 O SER A 1 26.542 2.875 -14.296 1.00 -1.00 \ ATOM 5 CB SER A 1 29.158 2.437 -12.505 1.00 -1.00 \ ATOM 6 OG SER A 1 30.500 1.984 -12.498 1.00 -1.00 \ ATOM 7 N ASN A 2 26.056 1.633 -12.480 1.00 -1.00 \ ATOM 8 CA ASN A 2 24.682 2.088 -12.426 1.00 -1.00 \ ATOM 9 C ASN A 2 24.588 3.314 -11.530 1.00 -1.00 \ ATOM 10 O ASN A 2 25.268 3.388 -10.505 1.00 -1.00 \ ATOM 11 CB ASN A 2 23.786 0.970 -11.893 1.00 -1.00 \ ATOM 12 CG ASN A 2 23.862 -0.291 -12.742 1.00 -1.00 \ ATOM 13 OD1 ASN A 2 23.942 -0.224 -13.978 1.00 -1.00 \ ATOM 14 ND2 ASN A 2 23.823 -1.450 -12.085 1.00 -1.00 \ ATOM 15 N ALA A 3 23.762 4.283 -11.917 1.00 0.58 \ ATOM 16 CA ALA A 3 23.593 5.488 -11.112 1.00 0.58 \ ATOM 17 C ALA A 3 22.629 5.177 -9.973 1.00 0.58 \ ATOM 18 O ALA A 3 22.551 5.904 -8.984 1.00 0.58 \ ATOM 19 CB ALA A 3 23.047 6.621 -11.966 1.00 0.58 \ ATOM 20 N MET A 4 21.891 4.086 -10.121 1.00 0.58 \ ATOM 21 CA MET A 4 20.936 3.675 -9.101 1.00 0.58 \ ATOM 22 C MET A 4 20.553 2.232 -9.348 1.00 0.58 \ ATOM 23 O MET A 4 20.932 1.645 -10.363 1.00 0.58 \ ATOM 24 CB MET A 4 19.660 4.521 -9.186 1.00 0.58 \ ATOM 25 CG MET A 4 18.840 4.230 -10.443 1.00 0.58 \ ATOM 26 SD MET A 4 17.375 5.252 -10.628 1.00 0.58 \ ATOM 27 CE MET A 4 16.120 4.233 -9.867 1.00 0.58 \ ATOM 28 N PHE A 5 19.814 1.666 -8.402 1.00 0.58 \ ATOM 29 CA PHE A 5 19.293 0.318 -8.549 1.00 0.58 \ ATOM 30 C PHE A 5 18.087 0.126 -7.656 1.00 0.58 \ ATOM 31 O PHE A 5 18.186 0.157 -6.434 1.00 0.58 \ ATOM 32 CB PHE A 5 20.304 -0.766 -8.228 1.00 0.58 \ ATOM 33 CG PHE A 5 19.822 -2.126 -8.631 1.00 0.58 \ ATOM 34 CD1 PHE A 5 19.922 -2.543 -9.950 1.00 0.58 \ ATOM 35 CD2 PHE A 5 19.164 -2.945 -7.722 1.00 0.58 \ ATOM 36 CE1 PHE A 5 19.369 -3.751 -10.362 1.00 0.58 \ ATOM 37 CE2 PHE A 5 18.606 -4.157 -8.123 1.00 0.58 \ ATOM 38 CZ PHE A 5 18.708 -4.559 -9.445 1.00 0.58 \ ATOM 39 N CYS A 6 16.944 -0.081 -8.290 1.00 0.58 \ ATOM 40 CA CYS A 6 15.697 -0.262 -7.581 1.00 0.58 \ ATOM 41 C CYS A 6 14.817 -1.194 -8.389 1.00 0.58 \ ATOM 42 O CYS A 6 14.668 -1.015 -9.599 1.00 0.58 \ ATOM 43 CB CYS A 6 15.001 1.093 -7.424 1.00 0.58 \ ATOM 44 SG CYS A 6 13.460 1.036 -6.506 1.00 0.58 \ ATOM 45 N TYR A 7 14.244 -2.196 -7.732 1.00 -1.60 \ ATOM 46 CA TYR A 7 13.357 -3.119 -8.427 1.00 -1.60 \ ATOM 47 C TYR A 7 12.191 -3.515 -7.535 1.00 -1.60 \ ATOM 48 O TYR A 7 11.641 -4.601 -7.661 1.00 -1.60 \ ATOM 49 CB TYR A 7 14.123 -4.364 -8.911 1.00 -1.60 \ ATOM 50 CG TYR A 7 14.792 -5.206 -7.838 1.00 -1.60 \ ATOM 51 CD1 TYR A 7 15.414 -6.421 -8.169 1.00 -1.60 \ ATOM 52 CD2 TYR A 7 14.807 -4.804 -6.502 1.00 -1.60 \ ATOM 53 CE1 TYR A 7 16.028 -7.208 -7.201 1.00 -1.60 \ ATOM 54 CE2 TYR A 7 15.423 -5.591 -5.520 1.00 -1.60 \ ATOM 55 CZ TYR A 7 16.030 -6.788 -5.877 1.00 -1.60 \ ATOM 56 OH TYR A 7 16.641 -7.555 -4.910 1.00 -1.60 \ ATOM 57 N GLN A 8 11.799 -2.598 -6.656 1.00 0.58 \ ATOM 58 CA GLN A 8 10.714 -2.845 -5.718 1.00 0.58 \ ATOM 59 C GLN A 8 9.303 -2.832 -6.278 1.00 0.58 \ ATOM 60 O GLN A 8 8.396 -3.346 -5.631 1.00 0.58 \ ATOM 61 CB GLN A 8 10.785 -1.857 -4.559 1.00 0.58 \ ATOM 62 CG GLN A 8 10.596 -0.406 -4.949 1.00 0.58 \ ATOM 63 CD GLN A 8 10.384 0.472 -3.730 1.00 0.58 \ ATOM 64 OE1 GLN A 8 11.035 0.287 -2.705 1.00 0.58 \ ATOM 65 NE2 GLN A 8 9.476 1.433 -3.835 1.00 0.58 \ ATOM 66 N CYS A 9 9.088 -2.242 -7.449 1.00 0.58 \ ATOM 67 CA CYS A 9 7.737 -2.235 -8.007 1.00 0.58 \ ATOM 68 C CYS A 9 7.677 -3.090 -9.268 1.00 0.58 \ ATOM 69 O CYS A 9 8.705 -3.399 -9.870 1.00 0.58 \ ATOM 70 CB CYS A 9 7.260 -0.811 -8.299 1.00 0.58 \ ATOM 71 SG CYS A 9 7.547 -0.236 -9.975 1.00 0.58 \ ATOM 72 N GLN A 10 6.466 -3.474 -9.654 1.00 0.58 \ ATOM 73 CA GLN A 10 6.250 -4.330 -10.807 1.00 0.58 \ ATOM 74 C GLN A 10 6.700 -3.773 -12.153 1.00 0.58 \ ATOM 75 O GLN A 10 7.010 -4.547 -13.065 1.00 0.58 \ ATOM 76 CB GLN A 10 4.770 -4.716 -10.874 1.00 0.58 \ ATOM 77 CG GLN A 10 4.343 -5.543 -12.086 1.00 0.58 \ ATOM 78 CD GLN A 10 4.317 -4.741 -13.377 1.00 0.58 \ ATOM 79 OE1 GLN A 10 3.849 -3.599 -13.405 1.00 0.58 \ ATOM 80 NE2 GLN A 10 4.807 -5.340 -14.456 1.00 0.58 \ ATOM 81 N GLU A 11 6.747 -2.452 -12.291 1.00 0.58 \ ATOM 82 CA GLU A 11 7.141 -1.857 -13.566 1.00 0.58 \ ATOM 83 C GLU A 11 8.641 -1.685 -13.738 1.00 0.58 \ ATOM 84 O GLU A 11 9.079 -1.045 -14.707 1.00 0.58 \ ATOM 85 CB GLU A 11 6.469 -0.491 -13.757 1.00 0.58 \ ATOM 86 CG GLU A 11 4.957 -0.506 -13.622 1.00 0.58 \ ATOM 87 CD GLU A 11 4.335 0.807 -14.022 1.00 0.58 \ ATOM 88 OE1 GLU A 11 5.053 1.829 -14.052 1.00 0.58 \ ATOM 89 OE2 GLU A 11 3.122 0.821 -14.299 1.00 0.58 \ ATOM 90 N THR A 12 9.420 -2.243 -12.810 1.00 0.58 \ ATOM 91 CA THR A 12 10.879 -2.136 -12.861 1.00 0.58 \ ATOM 92 C THR A 12 11.396 -2.445 -14.278 1.00 0.58 \ ATOM 93 O THR A 12 10.905 -3.366 -14.938 1.00 0.58 \ ATOM 94 CB THR A 12 11.529 -3.083 -11.822 1.00 0.58 \ ATOM 95 OG1 THR A 12 12.788 -2.549 -11.408 1.00 0.58 \ ATOM 96 CG2 THR A 12 11.740 -4.471 -12.409 1.00 0.58 \ ATOM 97 N VAL A 13 12.378 -1.666 -14.738 1.00 -1.60 \ ATOM 98 CA VAL A 13 12.943 -1.814 -16.084 1.00 -1.60 \ ATOM 99 C VAL A 13 13.363 -3.221 -16.523 1.00 -1.60 \ ATOM 100 O VAL A 13 14.328 -3.788 -16.016 1.00 -1.60 \ ATOM 101 CB VAL A 13 14.152 -0.873 -16.289 1.00 -1.60 \ ATOM 102 CG1 VAL A 13 14.747 -1.084 -17.686 1.00 -1.60 \ ATOM 103 CG2 VAL A 13 13.718 0.578 -16.106 1.00 -1.60 \ ATOM 104 N GLY A 14 12.639 -3.760 -17.499 1.00 -1.60 \ ATOM 105 CA GLY A 14 12.938 -5.091 -18.000 1.00 -1.60 \ ATOM 106 C GLY A 14 12.677 -6.157 -16.955 1.00 -1.60 \ ATOM 107 O GLY A 14 13.160 -7.285 -17.057 1.00 -1.60 \ ATOM 108 N ASN A 15 11.905 -5.792 -15.939 1.00 0.58 \ ATOM 109 CA ASN A 15 11.584 -6.709 -14.857 1.00 0.58 \ ATOM 110 C ASN A 15 12.878 -7.255 -14.263 1.00 0.58 \ ATOM 111 O ASN A 15 12.951 -8.411 -13.838 1.00 0.58 \ ATOM 112 CB ASN A 15 10.705 -7.845 -15.377 1.00 0.58 \ ATOM 113 CG ASN A 15 10.189 -8.727 -14.270 1.00 0.58 \ ATOM 114 OD1 ASN A 15 9.920 -8.258 -13.166 1.00 0.58 \ ATOM 115 ND2 ASN A 15 10.032 -10.011 -14.561 1.00 0.58 \ ATOM 116 N LYS A 16 13.896 -6.399 -14.238 1.00 -1.60 \ ATOM 117 CA LYS A 16 15.208 -6.749 -13.702 1.00 -1.60 \ ATOM 118 C LYS A 16 15.680 -5.657 -12.753 1.00 -1.60 \ ATOM 119 O LYS A 16 16.344 -5.937 -11.758 1.00 -1.60 \ ATOM 120 CB LYS A 16 16.230 -6.927 -14.839 1.00 -1.60 \ ATOM 121 N GLY A 17 15.337 -4.414 -13.063 1.00 0.58 \ ATOM 122 CA GLY A 17 15.742 -3.308 -12.213 1.00 0.58 \ ATOM 123 C GLY A 17 15.968 -1.998 -12.944 1.00 0.58 \ ATOM 124 O GLY A 17 16.251 -1.983 -14.138 1.00 0.58 \ ATOM 125 N CYS A 18 15.829 -0.893 -12.225 1.00 -1.00 \ ATOM 126 CA CYS A 18 16.031 0.429 -12.798 1.00 -1.00 \ ATOM 127 C CYS A 18 17.429 0.910 -12.430 1.00 -1.00 \ ATOM 128 O CYS A 18 17.748 1.060 -11.247 1.00 -1.00 \ ATOM 129 CB CYS A 18 14.971 1.387 -12.266 1.00 -1.00 \ ATOM 130 SG CYS A 18 13.322 1.066 -12.929 1.00 -1.00 \ ATOM 131 N THR A 19 18.257 1.159 -13.443 1.00 -1.00 \ ATOM 132 CA THR A 19 19.636 1.578 -13.214 1.00 -1.00 \ ATOM 133 C THR A 19 19.982 3.020 -13.553 1.00 -1.00 \ ATOM 134 O THR A 19 20.962 3.565 -13.034 1.00 -1.00 \ ATOM 135 CB THR A 19 20.601 0.671 -13.983 1.00 -1.00 \ ATOM 136 OG1 THR A 19 20.167 0.582 -15.345 1.00 -1.00 \ ATOM 137 CG2 THR A 19 20.633 -0.726 -13.371 1.00 -1.00 \ ATOM 138 N GLN A 20 19.205 3.642 -14.429 1.00 -1.00 \ ATOM 139 CA GLN A 20 19.479 5.028 -14.793 1.00 -1.00 \ ATOM 140 C GLN A 20 18.451 5.984 -14.215 1.00 -1.00 \ ATOM 141 O GLN A 20 18.809 6.978 -13.583 1.00 -1.00 \ ATOM 142 CB GLN A 20 19.548 5.173 -16.315 1.00 -1.00 \ ATOM 143 CG GLN A 20 20.906 4.767 -16.888 1.00 -1.00 \ ATOM 144 CD GLN A 20 20.996 4.953 -18.394 1.00 -1.00 \ ATOM 145 OE1 GLN A 20 22.097 4.973 -18.964 1.00 -1.00 \ ATOM 146 NE2 GLN A 20 19.837 5.079 -19.053 1.00 -1.00 \ ATOM 147 N VAL A 21 17.176 5.670 -14.426 1.00 -1.00 \ ATOM 148 CA VAL A 21 16.079 6.485 -13.928 1.00 -1.00 \ ATOM 149 C VAL A 21 14.867 5.585 -13.741 1.00 -1.00 \ ATOM 150 O VAL A 21 14.548 4.769 -14.599 1.00 -1.00 \ ATOM 151 CB VAL A 21 15.724 7.623 -14.923 1.00 -1.00 \ ATOM 152 CG1 VAL A 21 14.524 8.416 -14.424 1.00 -1.00 \ ATOM 153 CG2 VAL A 21 16.913 8.553 -15.090 1.00 -1.00 \ ATOM 154 N GLY A 22 14.192 5.727 -12.611 1.00 -1.00 \ ATOM 155 CA GLY A 22 13.029 4.900 -12.372 1.00 -1.00 \ ATOM 156 C GLY A 22 11.949 5.159 -13.403 1.00 -1.00 \ ATOM 157 O GLY A 22 11.791 6.288 -13.876 1.00 -1.00 \ ATOM 158 N VAL A 23 11.216 4.110 -13.763 1.00 -1.00 \ ATOM 159 CA VAL A 23 10.137 4.238 -14.729 1.00 -1.00 \ ATOM 160 C VAL A 23 9.122 5.177 -14.082 1.00 -1.00 \ ATOM 161 O VAL A 23 8.466 5.982 -14.758 1.00 -1.00 \ ATOM 162 CB VAL A 23 9.467 2.870 -15.001 1.00 -1.00 \ ATOM 163 CG1 VAL A 23 8.358 3.021 -16.024 1.00 -1.00 \ ATOM 164 CG2 VAL A 23 10.507 1.864 -15.481 1.00 -1.00 \ ATOM 165 N CYS A 24 9.024 5.067 -12.759 1.00 -1.00 \ ATOM 166 CA CYS A 24 8.119 5.875 -11.955 1.00 -1.00 \ ATOM 167 C CYS A 24 8.469 7.353 -12.043 1.00 -1.00 \ ATOM 168 O CYS A 24 7.621 8.212 -11.823 1.00 -1.00 \ ATOM 169 CB CYS A 24 8.203 5.443 -10.496 1.00 -1.00 \ ATOM 170 SG CYS A 24 9.806 5.805 -9.739 1.00 -1.00 \ ATOM 171 N GLY A 25 9.728 7.638 -12.356 1.00 -1.00 \ ATOM 172 CA GLY A 25 10.179 9.010 -12.456 1.00 -1.00 \ ATOM 173 C GLY A 25 11.252 9.340 -11.430 1.00 -1.00 \ ATOM 174 O GLY A 25 11.858 10.411 -11.490 1.00 -1.00 \ """, "e1gn9A3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1gn9A3_csv", state=0, origin=1) cmd.zoom("e1gn9A3_csv", animate=-1)