cmd.read_pdbstr("""\ ATOM 1 N SER A 1 28.898 1.592 -14.721 1.00 -1.00 \ ATOM 2 CA SER A 1 28.341 1.707 -13.343 1.00 -1.00 \ ATOM 3 C SER A 1 26.966 2.376 -13.322 1.00 -1.00 \ ATOM 4 O SER A 1 26.799 3.486 -13.825 1.00 -1.00 \ ATOM 5 CB SER A 1 29.299 2.501 -12.452 1.00 -1.00 \ ATOM 6 OG SER A 1 29.319 3.868 -12.816 1.00 -1.00 \ ATOM 7 N ASN A 2 25.971 1.651 -12.826 1.00 -1.00 \ ATOM 8 CA ASN A 2 24.640 2.190 -12.520 1.00 -1.00 \ ATOM 9 C ASN A 2 24.573 3.439 -11.606 1.00 -1.00 \ ATOM 10 O ASN A 2 25.173 3.492 -10.532 1.00 -1.00 \ ATOM 11 CB ASN A 2 23.784 1.090 -11.877 1.00 -1.00 \ ATOM 12 CG ASN A 2 23.703 -0.178 -12.718 1.00 -1.00 \ ATOM 13 OD1 ASN A 2 23.757 -0.123 -13.938 1.00 -1.00 \ ATOM 14 ND2 ASN A 2 23.548 -1.319 -12.058 1.00 -1.00 \ ATOM 15 N ALA A 3 23.790 4.428 -12.030 1.00 0.58 \ ATOM 16 CA ALA A 3 23.521 5.614 -11.217 1.00 0.58 \ ATOM 17 C ALA A 3 22.588 5.301 -10.038 1.00 0.58 \ ATOM 18 O ALA A 3 22.571 6.012 -9.040 1.00 0.58 \ ATOM 19 CB ALA A 3 22.900 6.710 -12.074 1.00 0.58 \ ATOM 20 N MET A 4 21.801 4.240 -10.183 1.00 0.58 \ ATOM 21 CA MET A 4 20.855 3.840 -9.144 1.00 0.58 \ ATOM 22 C MET A 4 20.535 2.364 -9.327 1.00 0.58 \ ATOM 23 O MET A 4 20.892 1.748 -10.347 1.00 0.58 \ ATOM 24 CB MET A 4 19.561 4.677 -9.248 1.00 0.58 \ ATOM 25 CG MET A 4 18.823 4.548 -10.581 1.00 0.58 \ ATOM 26 SD MET A 4 17.298 5.506 -10.636 1.00 0.58 \ ATOM 27 CE MET A 4 16.185 4.455 -9.695 1.00 0.58 \ ATOM 28 N PHE A 5 19.881 1.781 -8.330 1.00 0.58 \ ATOM 29 CA PHE A 5 19.310 0.465 -8.505 1.00 0.58 \ ATOM 30 C PHE A 5 18.049 0.386 -7.654 1.00 0.58 \ ATOM 31 O PHE A 5 18.101 0.474 -6.426 1.00 0.58 \ ATOM 32 CB PHE A 5 20.246 -0.695 -8.169 1.00 0.58 \ ATOM 33 CG PHE A 5 19.645 -2.006 -8.547 1.00 0.58 \ ATOM 34 CD1 PHE A 5 18.720 -2.616 -7.714 1.00 0.58 \ ATOM 35 CD2 PHE A 5 19.880 -2.562 -9.788 1.00 0.58 \ ATOM 36 CE1 PHE A 5 18.096 -3.774 -8.078 1.00 0.58 \ ATOM 37 CE2 PHE A 5 19.244 -3.732 -10.152 1.00 0.58 \ ATOM 38 CZ PHE A 5 18.359 -4.326 -9.287 1.00 0.58 \ ATOM 39 N CYS A 6 16.913 0.225 -8.305 1.00 0.58 \ ATOM 40 CA CYS A 6 15.658 0.033 -7.589 1.00 0.58 \ ATOM 41 C CYS A 6 14.837 -0.965 -8.367 1.00 0.58 \ ATOM 42 O CYS A 6 14.715 -0.844 -9.584 1.00 0.58 \ ATOM 43 CB CYS A 6 14.922 1.365 -7.454 1.00 0.58 \ ATOM 44 SG CYS A 6 13.385 1.283 -6.495 1.00 0.58 \ ATOM 45 N TYR A 7 14.277 -1.952 -7.672 1.00 -1.60 \ ATOM 46 CA TYR A 7 13.445 -2.966 -8.318 1.00 -1.60 \ ATOM 47 C TYR A 7 12.205 -3.313 -7.503 1.00 -1.60 \ ATOM 48 O TYR A 7 11.656 -4.406 -7.664 1.00 -1.60 \ ATOM 49 CB TYR A 7 14.253 -4.235 -8.666 1.00 -1.60 \ ATOM 50 CG TYR A 7 14.823 -5.115 -7.548 1.00 -1.60 \ ATOM 51 CD1 TYR A 7 14.779 -4.775 -6.199 1.00 -1.60 \ ATOM 52 CD2 TYR A 7 15.469 -6.304 -7.883 1.00 -1.60 \ ATOM 53 CE1 TYR A 7 15.343 -5.602 -5.225 1.00 -1.60 \ ATOM 54 CE2 TYR A 7 16.036 -7.127 -6.922 1.00 -1.60 \ ATOM 55 CZ TYR A 7 15.960 -6.783 -5.593 1.00 -1.60 \ ATOM 56 OH TYR A 7 16.510 -7.591 -4.612 1.00 -1.60 \ ATOM 57 N GLN A 8 11.734 -2.371 -6.681 1.00 0.58 \ ATOM 58 CA GLN A 8 10.680 -2.657 -5.708 1.00 0.58 \ ATOM 59 C GLN A 8 9.261 -2.672 -6.260 1.00 0.58 \ ATOM 60 O GLN A 8 8.370 -3.126 -5.534 1.00 0.58 \ ATOM 61 CB GLN A 8 10.745 -1.691 -4.519 1.00 0.58 \ ATOM 62 CG GLN A 8 10.452 -0.254 -4.835 1.00 0.58 \ ATOM 63 CD GLN A 8 10.279 0.597 -3.597 1.00 0.58 \ ATOM 64 OE1 GLN A 8 10.308 0.087 -2.462 1.00 0.58 \ ATOM 65 NE2 GLN A 8 10.097 1.901 -3.796 1.00 0.58 \ ATOM 66 N CYS A 9 9.015 -2.168 -7.476 1.00 0.58 \ ATOM 67 CA CYS A 9 7.648 -2.191 -8.011 1.00 0.58 \ ATOM 68 C CYS A 9 7.552 -3.001 -9.298 1.00 0.58 \ ATOM 69 O CYS A 9 8.563 -3.383 -9.918 1.00 0.58 \ ATOM 70 CB CYS A 9 7.061 -0.778 -8.197 1.00 0.58 \ ATOM 71 SG CYS A 9 7.483 0.066 -9.753 1.00 0.58 \ ATOM 72 N GLN A 10 6.318 -3.254 -9.699 1.00 0.58 \ ATOM 73 CA GLN A 10 6.050 -4.132 -10.829 1.00 0.58 \ ATOM 74 C GLN A 10 6.610 -3.596 -12.140 1.00 0.58 \ ATOM 75 O GLN A 10 6.926 -4.399 -13.023 1.00 0.58 \ ATOM 76 CB GLN A 10 4.544 -4.368 -10.944 1.00 0.58 \ ATOM 77 CG GLN A 10 4.104 -5.324 -12.022 1.00 0.58 \ ATOM 78 CD GLN A 10 4.023 -4.714 -13.403 1.00 0.58 \ ATOM 79 OE1 GLN A 10 4.393 -5.375 -14.413 1.00 0.58 \ ATOM 80 NE2 GLN A 10 3.539 -3.514 -13.489 1.00 0.58 \ ATOM 81 N GLU A 11 6.733 -2.284 -12.277 1.00 0.58 \ ATOM 82 CA GLU A 11 7.142 -1.639 -13.533 1.00 0.58 \ ATOM 83 C GLU A 11 8.652 -1.476 -13.711 1.00 0.58 \ ATOM 84 O GLU A 11 9.101 -0.840 -14.666 1.00 0.58 \ ATOM 85 CB GLU A 11 6.458 -0.267 -13.674 1.00 0.58 \ ATOM 86 CG GLU A 11 4.958 -0.406 -13.864 1.00 0.58 \ ATOM 87 CD GLU A 11 4.192 0.901 -13.983 1.00 0.58 \ ATOM 88 OE1 GLU A 11 4.807 1.982 -14.106 1.00 0.58 \ ATOM 89 OE2 GLU A 11 2.936 0.832 -13.947 1.00 0.58 \ ATOM 90 N THR A 12 9.438 -2.061 -12.826 1.00 0.58 \ ATOM 91 CA THR A 12 10.887 -1.917 -12.903 1.00 0.58 \ ATOM 92 C THR A 12 11.434 -2.296 -14.287 1.00 0.58 \ ATOM 93 O THR A 12 10.958 -3.228 -14.924 1.00 0.58 \ ATOM 94 CB THR A 12 11.524 -2.716 -11.772 1.00 0.58 \ ATOM 95 OG1 THR A 12 12.903 -2.342 -11.616 1.00 0.58 \ ATOM 96 CG2 THR A 12 11.513 -4.214 -12.012 1.00 0.58 \ ATOM 97 N VAL A 13 12.420 -1.545 -14.765 1.00 -1.60 \ ATOM 98 CA VAL A 13 12.906 -1.721 -16.133 1.00 -1.60 \ ATOM 99 C VAL A 13 13.278 -3.174 -16.419 1.00 -1.60 \ ATOM 100 O VAL A 13 14.052 -3.773 -15.674 1.00 -1.60 \ ATOM 101 CB VAL A 13 14.123 -0.814 -16.435 1.00 -1.60 \ ATOM 102 CG1 VAL A 13 14.693 -1.149 -17.821 1.00 -1.60 \ ATOM 103 CG2 VAL A 13 13.758 0.659 -16.361 1.00 -1.60 \ ATOM 104 N GLY A 14 12.718 -3.720 -17.504 1.00 -1.60 \ ATOM 105 CA GLY A 14 13.025 -5.060 -17.984 1.00 -1.60 \ ATOM 106 C GLY A 14 12.656 -6.168 -17.021 1.00 -1.60 \ ATOM 107 O GLY A 14 13.076 -7.312 -17.201 1.00 -1.60 \ ATOM 108 N ASN A 15 11.836 -5.854 -16.016 1.00 0.58 \ ATOM 109 CA ASN A 15 11.597 -6.762 -14.898 1.00 0.58 \ ATOM 110 C ASN A 15 12.922 -7.216 -14.289 1.00 0.58 \ ATOM 111 O ASN A 15 13.069 -8.351 -13.852 1.00 0.58 \ ATOM 112 CB ASN A 15 10.711 -7.949 -15.254 1.00 0.58 \ ATOM 113 CG ASN A 15 10.022 -8.514 -14.029 1.00 0.58 \ ATOM 114 OD1 ASN A 15 10.034 -7.882 -12.959 1.00 0.58 \ ATOM 115 ND2 ASN A 15 9.442 -9.697 -14.157 1.00 0.58 \ ATOM 116 N LYS A 16 13.864 -6.282 -14.222 1.00 -1.60 \ ATOM 117 CA LYS A 16 15.207 -6.523 -13.695 1.00 -1.60 \ ATOM 118 C LYS A 16 15.620 -5.442 -12.681 1.00 -1.60 \ ATOM 119 O LYS A 16 16.065 -5.741 -11.575 1.00 -1.60 \ ATOM 120 CB LYS A 16 16.214 -6.589 -14.853 0.50 -1.60 \ ATOM 121 CG LYS A 16 17.645 -6.816 -14.431 0.50 -1.60 \ ATOM 122 CD LYS A 16 18.544 -7.008 -15.646 0.50 -1.60 \ ATOM 123 CE LYS A 16 19.983 -7.315 -15.256 0.50 -1.60 \ ATOM 124 NZ LYS A 16 20.857 -7.514 -16.448 0.50 -1.60 \ ATOM 125 N GLY A 17 15.452 -4.175 -13.053 1.00 0.58 \ ATOM 126 CA GLY A 17 15.824 -3.076 -12.177 1.00 0.58 \ ATOM 127 C GLY A 17 15.969 -1.766 -12.908 1.00 0.58 \ ATOM 128 O GLY A 17 16.431 -1.724 -14.059 1.00 0.58 \ ATOM 129 N CYS A 18 15.561 -0.685 -12.260 1.00 -1.00 \ ATOM 130 CA CYS A 18 15.766 0.670 -12.764 1.00 -1.00 \ ATOM 131 C CYS A 18 17.170 1.089 -12.354 1.00 -1.00 \ ATOM 132 O CYS A 18 17.496 1.136 -11.165 1.00 -1.00 \ ATOM 133 CB CYS A 18 14.720 1.622 -12.190 1.00 -1.00 \ ATOM 134 SG CYS A 18 13.024 1.234 -12.678 1.00 -1.00 \ ATOM 135 N THR A 19 18.004 1.391 -13.361 1.00 -1.00 \ ATOM 136 CA THR A 19 19.421 1.695 -13.143 1.00 -1.00 \ ATOM 137 C THR A 19 19.852 3.085 -13.566 1.00 -1.00 \ ATOM 138 O THR A 19 20.950 3.496 -13.211 1.00 -1.00 \ ATOM 139 CB THR A 19 20.311 0.674 -13.857 1.00 -1.00 \ ATOM 140 OG1 THR A 19 20.060 0.715 -15.277 1.00 -1.00 \ ATOM 141 CG2 THR A 19 19.974 -0.735 -13.418 1.00 -1.00 \ ATOM 142 N GLN A 20 19.010 3.802 -14.293 1.00 -1.00 \ ATOM 143 CA GLN A 20 19.355 5.150 -14.743 1.00 -1.00 \ ATOM 144 C GLN A 20 18.401 6.174 -14.141 1.00 -1.00 \ ATOM 145 O GLN A 20 18.807 7.063 -13.418 1.00 -1.00 \ ATOM 146 CB GLN A 20 19.359 5.211 -16.268 1.00 -1.00 \ ATOM 147 CG GLN A 20 20.512 4.424 -16.885 1.00 -1.00 \ ATOM 148 CD GLN A 20 20.639 4.602 -18.393 1.00 -1.00 \ ATOM 149 OE1 GLN A 20 19.819 5.276 -19.034 1.00 -1.00 \ ATOM 150 NE2 GLN A 20 21.679 4.004 -18.964 1.00 -1.00 \ ATOM 151 N VAL A 21 17.119 5.991 -14.416 1.00 -1.00 \ ATOM 152 CA VAL A 21 16.039 6.788 -13.860 1.00 -1.00 \ ATOM 153 C VAL A 21 14.882 5.801 -13.656 1.00 -1.00 \ ATOM 154 O VAL A 21 14.741 4.823 -14.410 1.00 -1.00 \ ATOM 155 CB VAL A 21 15.654 7.915 -14.831 1.00 -1.00 \ ATOM 156 CG1 VAL A 21 14.273 8.501 -14.644 0.33 -1.00 \ ATOM 157 CG2 VAL A 21 16.526 9.098 -14.464 0.33 -1.00 \ ATOM 158 N GLY A 22 14.070 6.011 -12.632 1.00 -1.00 \ ATOM 159 CA GLY A 22 12.936 5.130 -12.426 1.00 -1.00 \ ATOM 160 C GLY A 22 11.865 5.326 -13.482 1.00 -1.00 \ ATOM 161 O GLY A 22 11.622 6.448 -13.948 1.00 -1.00 \ ATOM 162 N VAL A 23 11.189 4.251 -13.842 1.00 -1.00 \ ATOM 163 CA VAL A 23 10.023 4.347 -14.715 1.00 -1.00 \ ATOM 164 C VAL A 23 8.976 5.264 -14.073 1.00 -1.00 \ ATOM 165 O VAL A 23 8.238 5.959 -14.776 1.00 -1.00 \ ATOM 166 CB VAL A 23 9.458 2.937 -14.998 1.00 -1.00 \ ATOM 167 CG1 VAL A 23 8.118 2.963 -15.755 1.00 -1.00 \ ATOM 168 CG2 VAL A 23 10.493 2.111 -15.755 1.00 -1.00 \ ATOM 169 N CYS A 24 8.935 5.289 -12.740 1.00 -1.00 \ ATOM 170 CA CYS A 24 8.017 6.134 -11.970 1.00 -1.00 \ ATOM 171 C CYS A 24 8.423 7.605 -11.985 1.00 -1.00 \ ATOM 172 O CYS A 24 7.675 8.458 -11.527 1.00 -1.00 \ ATOM 173 CB CYS A 24 7.971 5.642 -10.518 1.00 -1.00 \ ATOM 174 SG CYS A 24 9.589 5.726 -9.698 1.00 -1.00 \ ATOM 175 N GLY A 25 9.623 7.891 -12.488 1.00 -1.00 \ ATOM 176 CA GLY A 25 10.166 9.237 -12.489 1.00 -1.00 \ ATOM 177 C GLY A 25 11.210 9.508 -11.415 1.00 -1.00 \ ATOM 178 O GLY A 25 11.814 10.590 -11.389 1.00 -1.00 \ ATOM 179 N LYS A 26 11.449 8.548 -10.526 1.00 -1.00 \ ATOM 180 CA LYS A 26 12.406 8.736 -9.436 1.00 -1.00 \ ATOM 181 C LYS A 26 13.813 8.898 -9.986 1.00 -1.00 \ ATOM 182 O LYS A 26 14.348 8.003 -10.646 1.00 -1.00 \ ATOM 183 CB LYS A 26 12.369 7.571 -8.440 1.00 -1.00 \ ATOM 184 CG LYS A 26 13.285 7.767 -7.243 1.00 -1.00 \ ATOM 185 CD LYS A 26 13.002 6.766 -6.123 1.00 -1.00 \ ATOM 186 CE LYS A 26 13.167 5.314 -6.537 1.00 -1.00 \ ATOM 187 NZ LYS A 26 12.962 4.398 -5.370 1.00 -1.00 \ """, "e1gnlA3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1gnlA3_csv", state=0, origin=1) cmd.zoom("e1gnlA3_csv", animate=-1)