cmd.read_pdbstr("""\ ATOM 1 N SER B 1 79.909 27.299 46.626 1.00 -1.00 \ ATOM 2 CA SER B 1 79.235 27.431 45.293 1.00 -1.00 \ ATOM 3 C SER B 1 77.773 27.052 45.388 1.00 -1.00 \ ATOM 4 O SER B 1 77.390 26.130 46.108 1.00 -1.00 \ ATOM 5 CB SER B 1 79.876 26.537 44.245 1.00 -1.00 \ ATOM 6 OG SER B 1 81.236 26.866 44.059 1.00 -1.00 \ ATOM 7 N ASN B 2 76.948 27.832 44.710 1.00 -1.00 \ ATOM 8 CA ASN B 2 75.529 27.533 44.587 1.00 -1.00 \ ATOM 9 C ASN B 2 75.197 26.301 43.737 1.00 -1.00 \ ATOM 10 O ASN B 2 75.713 26.135 42.621 1.00 -1.00 \ ATOM 11 CB ASN B 2 74.839 28.772 43.998 1.00 -1.00 \ ATOM 12 CG ASN B 2 74.960 30.018 44.910 1.00 -1.00 \ ATOM 13 OD1 ASN B 2 74.949 31.147 44.423 1.00 -1.00 \ ATOM 14 ND2 ASN B 2 75.056 29.802 46.213 1.00 -1.00 \ ATOM 15 N ALA B 3 74.313 25.455 44.249 1.00 0.58 \ ATOM 16 CA ALA B 3 73.760 24.339 43.477 1.00 0.58 \ ATOM 17 C ALA B 3 72.881 24.865 42.329 1.00 0.58 \ ATOM 18 O ALA B 3 72.737 24.198 41.302 1.00 0.58 \ ATOM 19 CB ALA B 3 72.955 23.414 44.375 1.00 0.58 \ ATOM 20 N MET B 4 72.292 26.036 42.516 1.00 0.58 \ ATOM 21 CA MET B 4 71.443 26.657 41.510 1.00 0.58 \ ATOM 22 C MET B 4 71.425 28.155 41.757 1.00 0.58 \ ATOM 23 O MET B 4 71.867 28.639 42.800 1.00 0.58 \ ATOM 24 CB MET B 4 70.003 26.093 41.587 1.00 0.58 \ ATOM 25 CG MET B 4 69.304 26.300 42.944 1.00 0.58 \ ATOM 26 SD MET B 4 67.601 25.730 42.982 1.00 0.58 \ ATOM 27 CE MET B 4 66.785 27.023 42.059 1.00 0.58 \ ATOM 28 N PHE B 5 70.912 28.895 40.785 1.00 0.58 \ ATOM 29 CA PHE B 5 70.592 30.286 41.039 1.00 0.58 \ ATOM 30 C PHE B 5 69.372 30.684 40.239 1.00 0.58 \ ATOM 31 O PHE B 5 69.425 30.729 39.010 1.00 0.58 \ ATOM 32 CB PHE B 5 71.738 31.269 40.770 1.00 0.58 \ ATOM 33 CG PHE B 5 71.411 32.634 41.308 1.00 0.58 \ ATOM 34 CD1 PHE B 5 71.638 32.938 42.644 1.00 0.58 \ ATOM 35 CD2 PHE B 5 70.738 33.566 40.532 1.00 0.58 \ ATOM 36 CE1 PHE B 5 71.255 34.154 43.164 1.00 0.58 \ ATOM 37 CE2 PHE B 5 70.363 34.764 41.064 1.00 0.58 \ ATOM 38 CZ PHE B 5 70.616 35.055 42.369 1.00 0.58 \ ATOM 39 N CYS B 6 68.274 30.977 40.925 1.00 0.58 \ ATOM 40 CA CYS B 6 67.056 31.431 40.261 1.00 0.58 \ ATOM 41 C CYS B 6 66.443 32.507 41.137 1.00 0.58 \ ATOM 42 O CYS B 6 66.343 32.340 42.349 1.00 0.58 \ ATOM 43 CB CYS B 6 66.108 30.253 40.018 1.00 0.58 \ ATOM 44 SG CYS B 6 64.616 30.673 39.093 1.00 0.58 \ ATOM 45 N TYR B 7 66.067 33.626 40.521 1.00 -1.60 \ ATOM 46 CA TYR B 7 65.469 34.756 41.238 1.00 -1.60 \ ATOM 47 C TYR B 7 64.332 35.401 40.451 1.00 -1.60 \ ATOM 48 O TYR B 7 64.001 36.563 40.670 1.00 -1.60 \ ATOM 49 CB TYR B 7 66.520 35.799 41.665 1.00 -1.60 \ ATOM 50 CG TYR B 7 67.279 36.584 40.616 1.00 -1.60 \ ATOM 51 CD1 TYR B 7 67.202 36.336 39.245 1.00 -1.60 \ ATOM 52 CD2 TYR B 7 68.141 37.583 41.036 1.00 -1.60 \ ATOM 53 CE1 TYR B 7 67.963 37.083 38.333 1.00 -1.60 \ ATOM 54 CE2 TYR B 7 68.900 38.320 40.144 1.00 -1.60 \ ATOM 55 CZ TYR B 7 68.810 38.066 38.800 1.00 -1.60 \ ATOM 56 OH TYR B 7 69.549 38.791 37.867 1.00 -1.60 \ ATOM 57 N GLN B 8 63.683 34.624 39.590 1.00 0.58 \ ATOM 58 CA GLN B 8 62.703 35.189 38.649 1.00 0.58 \ ATOM 59 C GLN B 8 61.299 35.458 39.180 1.00 0.58 \ ATOM 60 O GLN B 8 60.528 36.131 38.496 1.00 0.58 \ ATOM 61 CB GLN B 8 62.610 34.303 37.411 1.00 0.58 \ ATOM 62 CG GLN B 8 62.032 32.918 37.652 1.00 0.58 \ ATOM 63 CD GLN B 8 61.717 32.191 36.366 1.00 0.58 \ ATOM 64 OE1 GLN B 8 61.847 32.759 35.261 1.00 0.58 \ ATOM 65 NE2 GLN B 8 61.300 30.933 36.479 1.00 0.58 \ ATOM 66 N CYS B 9 60.954 34.953 40.364 1.00 0.58 \ ATOM 67 CA CYS B 9 59.631 35.203 40.904 1.00 0.58 \ ATOM 68 C CYS B 9 59.684 35.935 42.231 1.00 0.58 \ ATOM 69 O CYS B 9 60.738 36.071 42.866 1.00 0.58 \ ATOM 70 CB CYS B 9 58.781 33.934 41.018 1.00 0.58 \ ATOM 71 SG CYS B 9 59.066 32.919 42.493 1.00 0.58 \ ATOM 72 N GLN B 10 58.515 36.391 42.656 1.00 0.58 \ ATOM 73 CA GLN B 10 58.404 37.237 43.823 1.00 0.58 \ ATOM 74 C GLN B 10 58.834 36.542 45.099 1.00 0.58 \ ATOM 75 O GLN B 10 59.285 37.207 46.036 1.00 0.58 \ ATOM 76 CB GLN B 10 56.965 37.764 43.916 1.00 0.58 \ ATOM 77 CG GLN B 10 56.697 38.737 45.041 1.00 0.58 \ ATOM 78 CD GLN B 10 56.494 38.091 46.402 1.00 0.58 \ ATOM 79 OE1 GLN B 10 56.972 38.627 47.441 1.00 0.58 \ ATOM 80 NE2 GLN B 10 55.806 36.980 46.428 1.00 0.58 \ ATOM 81 N GLU B 11 58.700 35.224 45.156 1.00 0.58 \ ATOM 82 CA GLU B 11 58.958 34.441 46.368 1.00 0.58 \ ATOM 83 C GLU B 11 60.402 33.975 46.522 1.00 0.58 \ ATOM 84 O GLU B 11 60.711 33.200 47.422 1.00 0.58 \ ATOM 85 CB GLU B 11 58.002 33.236 46.412 1.00 0.58 \ ATOM 86 CG GLU B 11 56.559 33.642 46.650 1.00 0.58 \ ATOM 87 CD GLU B 11 55.574 32.497 46.751 1.00 0.58 \ ATOM 88 OE1 GLU B 11 55.991 31.317 46.819 1.00 0.58 \ ATOM 89 OE2 GLU B 11 54.360 32.827 46.773 1.00 0.58 \ ATOM 90 N THR B 12 61.300 34.429 45.662 1.00 0.58 \ ATOM 91 CA THR B 12 62.686 33.986 45.737 1.00 0.58 \ ATOM 92 C THR B 12 63.258 34.172 47.152 1.00 0.58 \ ATOM 93 O THR B 12 62.968 35.155 47.836 1.00 0.58 \ ATOM 94 CB THR B 12 63.504 34.694 44.643 1.00 0.58 \ ATOM 95 OG1 THR B 12 64.764 34.025 44.499 1.00 0.58 \ ATOM 96 CG2 THR B 12 63.814 36.132 44.979 1.00 0.58 \ ATOM 97 N VAL B 13 64.088 33.227 47.590 1.00 -1.60 \ ATOM 98 CA VAL B 13 64.534 33.226 48.981 1.00 -1.60 \ ATOM 99 C VAL B 13 65.146 34.562 49.387 1.00 -1.60 \ ATOM 100 O VAL B 13 66.071 35.057 48.745 1.00 -1.60 \ ATOM 101 CB VAL B 13 65.576 32.100 49.269 1.00 -1.60 \ ATOM 102 CG1 VAL B 13 66.116 32.213 50.707 1.00 -1.60 \ ATOM 103 CG2 VAL B 13 64.978 30.721 49.062 1.00 -1.60 \ ATOM 104 N GLY B 14 64.640 35.124 50.485 1.00 -1.60 \ ATOM 105 CA GLY B 14 65.169 36.331 51.084 1.00 -1.60 \ ATOM 106 C GLY B 14 65.078 37.550 50.186 1.00 -1.60 \ ATOM 107 O GLY B 14 65.721 38.560 50.468 1.00 -1.60 \ ATOM 108 N ASN B 15 64.268 37.477 49.126 1.00 0.58 \ ATOM 109 CA ASN B 15 64.274 38.472 48.050 1.00 0.58 \ ATOM 110 C ASN B 15 65.694 38.677 47.509 1.00 0.58 \ ATOM 111 O ASN B 15 66.066 39.791 47.117 1.00 0.58 \ ATOM 112 CB ASN B 15 63.591 39.786 48.410 1.00 0.58 \ ATOM 113 CG ASN B 15 63.102 40.502 47.168 1.00 0.58 \ ATOM 114 OD1 ASN B 15 62.974 39.888 46.104 1.00 0.58 \ ATOM 115 ND2 ASN B 15 62.873 41.810 47.277 1.00 0.58 \ ATOM 116 N LYS B 16 66.461 37.590 47.457 1.00 -1.60 \ ATOM 117 CA LYS B 16 67.821 37.595 46.937 1.00 -1.60 \ ATOM 118 C LYS B 16 68.020 36.532 45.867 1.00 -1.60 \ ATOM 119 O LYS B 16 68.535 36.811 44.788 1.00 -1.60 \ ATOM 120 CB LYS B 16 68.838 37.389 48.065 1.00 -1.60 \ ATOM 121 CG LYS B 16 68.940 38.557 49.034 1.00 -1.60 \ ATOM 122 CD LYS B 16 69.806 38.229 50.256 1.00 -1.60 \ ATOM 123 CE LYS B 16 69.656 39.277 51.362 1.00 -1.60 \ ATOM 124 NZ LYS B 16 70.436 38.940 52.590 1.00 -1.60 \ ATOM 125 N GLY B 17 67.595 35.308 46.136 1.00 0.58 \ ATOM 126 CA GLY B 17 67.760 34.240 45.165 1.00 0.58 \ ATOM 127 C GLY B 17 67.676 32.871 45.787 1.00 0.58 \ ATOM 128 O GLY B 17 68.047 32.655 46.936 1.00 0.58 \ ATOM 129 N CYS B 18 67.129 31.934 45.033 1.00 -1.00 \ ATOM 130 CA CYS B 18 67.070 30.525 45.414 1.00 -1.00 \ ATOM 131 C CYS B 18 68.376 29.883 44.962 1.00 -1.00 \ ATOM 132 O CYS B 18 68.670 29.843 43.769 1.00 -1.00 \ ATOM 133 CB CYS B 18 65.871 29.846 44.758 1.00 -1.00 \ ATOM 134 SG CYS B 18 64.273 30.535 45.272 1.00 -1.00 \ ATOM 135 N THR B 19 69.168 29.403 45.919 1.00 -1.00 \ ATOM 136 CA THR B 19 70.528 28.918 45.661 1.00 -1.00 \ ATOM 137 C THR B 19 70.714 27.422 45.849 1.00 -1.00 \ ATOM 138 O THR B 19 71.730 26.883 45.405 1.00 -1.00 \ ATOM 139 CB THR B 19 71.538 29.636 46.585 1.00 -1.00 \ ATOM 140 OG1 THR B 19 71.177 29.399 47.949 1.00 -1.00 \ ATOM 141 CG2 THR B 19 71.493 31.126 46.392 1.00 -1.00 \ ATOM 142 N GLN B 20 69.772 26.763 46.517 1.00 -1.00 \ ATOM 143 CA GLN B 20 69.870 25.331 46.775 1.00 -1.00 \ ATOM 144 C GLN B 20 68.641 24.609 46.242 1.00 -1.00 \ ATOM 145 O GLN B 20 68.781 23.697 45.434 1.00 -1.00 \ ATOM 146 CB GLN B 20 70.082 25.052 48.269 1.00 -1.00 \ ATOM 147 CG GLN B 20 70.211 23.557 48.571 1.00 -1.00 \ ATOM 148 CD GLN B 20 71.359 22.912 47.821 1.00 -1.00 \ ATOM 149 OE1 GLN B 20 72.489 23.374 47.909 1.00 -1.00 \ ATOM 150 NE2 GLN B 20 71.075 21.851 47.077 1.00 -1.00 \ ATOM 151 N VAL B 21 67.454 25.016 46.694 1.00 -1.00 \ ATOM 152 CA VAL B 21 66.187 24.494 46.204 1.00 -1.00 \ ATOM 153 C VAL B 21 65.230 25.683 46.105 1.00 -1.00 \ ATOM 154 O VAL B 21 65.296 26.634 46.900 1.00 -1.00 \ ATOM 155 CB VAL B 21 65.647 23.384 47.132 1.00 -1.00 \ ATOM 156 CG1 VAL B 21 64.158 23.053 46.974 0.33 -1.00 \ ATOM 157 CG2 VAL B 21 66.261 22.102 46.684 0.33 -1.00 \ ATOM 158 N GLY B 22 64.345 25.659 45.123 1.00 -1.00 \ ATOM 159 CA GLY B 22 63.410 26.746 44.958 1.00 -1.00 \ ATOM 160 C GLY B 22 62.285 26.738 45.966 1.00 -1.00 \ ATOM 161 O GLY B 22 61.818 25.675 46.377 1.00 -1.00 \ ATOM 162 N VAL B 23 61.819 27.927 46.336 1.00 -1.00 \ ATOM 163 CA VAL B 23 60.633 28.073 47.175 1.00 -1.00 \ ATOM 164 C VAL B 23 59.420 27.428 46.468 1.00 -1.00 \ ATOM 165 O VAL B 23 58.506 26.903 47.107 1.00 -1.00 \ ATOM 166 CB VAL B 23 60.403 29.556 47.495 1.00 -1.00 \ ATOM 167 CG1 VAL B 23 59.101 29.781 48.238 1.00 -1.00 \ ATOM 168 CG2 VAL B 23 61.581 30.075 48.298 1.00 -1.00 \ ATOM 169 N CYS B 24 59.432 27.412 45.146 1.00 -1.00 \ ATOM 170 CA CYS B 24 58.365 26.810 44.344 1.00 -1.00 \ ATOM 171 C CYS B 24 58.477 25.288 44.286 1.00 -1.00 \ ATOM 172 O CYS B 24 57.572 24.621 43.788 1.00 -1.00 \ ATOM 173 CB CYS B 24 58.426 27.357 42.917 1.00 -1.00 \ ATOM 174 SG CYS B 24 59.992 26.976 42.074 1.00 -1.00 \ ATOM 175 N GLY B 25 59.590 24.736 44.774 1.00 -1.00 \ ATOM 176 CA GLY B 25 59.821 23.303 44.731 1.00 -1.00 \ ATOM 177 C GLY B 25 60.779 22.874 43.634 1.00 -1.00 \ ATOM 178 O GLY B 25 61.101 21.689 43.528 1.00 -1.00 \ """, "e1gnlB3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1gnlB3_csv", state=0, origin=1) cmd.zoom("e1gnlB3_csv", animate=-1)