cmd.read_pdbstr("""\ ATOM 1 CA LEU A 86 -21.540 0.672 -19.368 1.00 -0.88 \ ATOM 2 CA TRP A 87 -21.488 0.068 -15.552 1.00 -0.82 \ ATOM 3 CA GLY A 88 -20.164 -3.580 -15.532 1.00 0.55 \ ATOM 4 CA ARG A 89 -16.600 -2.188 -16.120 1.00 0.62 \ ATOM 5 CA CYS A 90 -17.128 0.260 -13.196 1.00 0.30 \ ATOM 6 CA VAL A 91 -18.056 -2.760 -10.972 1.00 0.42 \ ATOM 7 CA ALA A 92 -14.888 -4.464 -12.344 1.00 0.19 \ ATOM 8 CA VAL A 93 -12.748 -1.408 -11.280 1.00 0.37 \ ATOM 9 CA VAL A 94 -14.460 -1.456 -7.800 1.00 0.25 \ ATOM 10 CA VAL A 95 -13.752 -5.200 -7.164 1.00 -0.09 \ ATOM 11 CA MET A 96 -10.196 -4.760 -8.620 1.00 0.48 \ ATOM 12 CA VAL A 97 -9.304 -1.884 -6.208 1.00 0.37 \ ATOM 13 CA ALA A 98 -11.108 -3.732 -3.344 1.00 -0.16 \ ATOM 14 CA GLY A 99 -9.012 -6.880 -4.140 1.00 1.09 \ ATOM 15 CA ILE A 100 -5.716 -4.876 -4.256 1.00 0.50 \ ATOM 16 CA THR A 101 -6.896 -3.224 -0.972 1.00 0.27 \ ATOM 17 CA SER A 102 -7.796 -6.604 0.680 1.00 0.43 \ ATOM 18 CA PHE A 103 -4.400 -8.228 -0.020 1.00 0.30 \ ATOM 19 CA GLY A 104 -2.632 -4.904 0.908 1.00 0.27 \ ATOM 20 CA LEU A 105 -4.676 -5.152 4.180 1.00 -0.32 \ ATOM 21 CA VAL A 106 -3.564 -8.752 5.076 1.00 -0.17 \ ATOM 22 CA THR A 107 -0.080 -7.420 4.140 1.00 0.32 \ ATOM 23 CA ALA A 108 -0.060 -4.232 6.344 1.00 0.01 \ ATOM 24 CA ALA A 109 -0.204 -5.876 9.832 1.00 -0.61 \ ATOM 25 CA LEU A 110 2.616 -8.484 9.444 1.00 0.48 \ ATOM 26 CA ALA A 111 5.452 -5.832 9.488 1.00 -0.08 \ ATOM 27 CA THR A 112 4.160 -3.840 12.504 1.00 -0.61 \ ATOM 28 CA TRP A 113 4.056 -7.368 14.044 1.00 -0.66 \ ATOM 29 CA PHE A 114 7.708 -7.972 12.840 1.00 0.09 \ ATOM 30 CA VAL A 115 8.844 -4.492 14.156 1.00 -0.47 \ ATOM 31 CA GLY A 116 7.536 -5.956 17.472 1.00 -1.00 \ ATOM 32 CA ARG A 117 11.132 -7.480 17.424 1.00 -1.00 \ ATOM 33 CA GLU A 118 12.964 -4.196 18.076 1.00 -0.52 \ ATOM 34 CA GLN A 119 12.984 -6.252 21.392 1.00 -0.72 \ """, "e1jq1A1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1jq1A1_csv", state=0, origin=1) cmd.zoom("e1jq1A1_csv", animate=-1)