cmd.read_pdbstr("""\ ATOM 1 CA LEU A 86 -20.728 0.648 -20.328 1.00 -0.88 \ ATOM 2 CA TRP A 87 -20.792 0.380 -16.464 1.00 -0.82 \ ATOM 3 CA GLY A 88 -19.784 -3.356 -16.136 1.00 0.55 \ ATOM 4 CA ARG A 89 -16.112 -2.324 -16.792 1.00 0.62 \ ATOM 5 CA CYS A 90 -16.432 0.364 -14.048 1.00 0.30 \ ATOM 6 CA VAL A 91 -17.628 -2.392 -11.620 1.00 0.42 \ ATOM 7 CA ALA A 92 -14.600 -4.444 -12.816 1.00 0.19 \ ATOM 8 CA VAL A 93 -12.208 -1.508 -11.960 1.00 0.37 \ ATOM 9 CA VAL A 94 -13.892 -1.168 -8.488 1.00 0.25 \ ATOM 10 CA VAL A 95 -13.528 -4.904 -7.576 1.00 -0.09 \ ATOM 11 CA MET A 96 -9.956 -4.872 -9.052 1.00 0.48 \ ATOM 12 CA VAL A 97 -8.728 -1.948 -6.836 1.00 0.37 \ ATOM 13 CA ALA A 98 -10.652 -3.388 -3.836 1.00 -0.16 \ ATOM 14 CA GLY A 99 -8.984 -6.828 -4.428 1.00 1.09 \ ATOM 15 CA ILE A 100 -5.468 -5.292 -4.888 1.00 0.50 \ ATOM 16 CA THR A 101 -5.848 -3.212 -1.660 1.00 0.27 \ ATOM 17 CA SER A 102 -7.444 -6.156 0.264 1.00 0.43 \ ATOM 18 CA PHE A 103 -4.760 -8.816 -0.524 1.00 0.30 \ ATOM 19 CA GLY A 104 -2.092 -6.140 0.068 1.00 0.27 \ ATOM 20 CA LEU A 105 -3.792 -5.696 3.480 1.00 -0.32 \ ATOM 21 CA VAL A 106 -4.048 -9.448 4.348 1.00 -0.17 \ ATOM 22 CA THR A 107 -0.220 -9.148 4.108 1.00 0.32 \ ATOM 23 CA ALA A 108 0.012 -5.632 5.712 1.00 0.01 \ ATOM 24 CA ALA A 109 0.000 -6.528 9.444 1.00 -0.61 \ ATOM 25 CA LEU A 110 2.964 -8.968 9.092 1.00 0.48 \ ATOM 26 CA ALA A 111 5.608 -6.240 8.448 1.00 -0.08 \ ATOM 27 CA THR A 112 4.616 -4.004 11.444 1.00 -0.61 \ ATOM 28 CA TRP A 113 4.240 -7.228 13.536 1.00 -0.66 \ ATOM 29 CA PHE A 114 7.828 -8.192 12.436 1.00 0.09 \ ATOM 30 CA VAL A 115 9.192 -4.676 13.328 1.00 -0.47 \ ATOM 31 CA GLY A 116 7.640 -5.464 16.772 1.00 -1.00 \ ATOM 32 CA ARG A 117 10.944 -7.492 17.100 1.00 -1.00 \ ATOM 33 CA GLU A 118 12.896 -4.284 17.748 1.00 -0.52 \ ATOM 34 CA GLN A 119 12.972 -6.232 21.140 1.00 -0.72 \ """, "e1jq2A1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1jq2A1_csv", state=0, origin=1) cmd.zoom("e1jq2A1_csv", animate=-1)