cmd.read_pdbstr("""\ ATOM 1 N ALA D 1 -3.689 41.314 75.463 1.00 -1.00 \ ATOM 2 CA ALA D 1 -3.334 40.295 74.410 1.00 -1.00 \ ATOM 3 C ALA D 1 -1.995 40.690 73.800 1.00 -1.00 \ ATOM 4 O ALA D 1 -1.529 41.852 73.953 1.00 -1.00 \ ATOM 5 CB ALA D 1 -4.422 40.191 73.346 1.00 -1.00 \ ATOM 6 N ASN D 2 -1.360 39.719 73.138 1.00 -0.01 \ ATOM 7 CA ASN D 2 -0.055 39.963 72.542 1.00 -0.01 \ ATOM 8 C ASN D 2 -0.023 39.812 71.028 1.00 -0.01 \ ATOM 9 O ASN D 2 -0.667 38.896 70.443 1.00 -0.01 \ ATOM 10 CB ASN D 2 1.006 39.049 73.180 1.00 -0.01 \ ATOM 11 CG ASN D 2 1.103 39.233 74.675 1.00 -0.01 \ ATOM 12 OD1 ASN D 2 1.035 40.357 75.164 1.00 -0.01 \ ATOM 13 ND2 ASN D 2 1.265 38.143 75.407 1.00 -0.01 \ ATOM 14 N SER D 3 0.616 40.800 70.413 1.00 0.62 \ ATOM 15 CA SER D 3 0.844 40.840 68.962 1.00 0.62 \ ATOM 16 C SER D 3 2.378 40.892 68.809 1.00 0.62 \ ATOM 17 O SER D 3 3.110 41.122 69.777 1.00 0.62 \ ATOM 18 CB SER D 3 0.097 42.005 68.301 1.00 0.62 \ ATOM 19 OG SER D 3 0.611 43.256 68.695 1.00 0.62 \ ATOM 20 N PHE D 4 2.883 40.584 67.619 1.00 0.04 \ ATOM 21 CA PHE D 4 4.325 40.541 67.392 1.00 0.04 \ ATOM 22 C PHE D 4 5.095 41.775 67.836 1.00 0.04 \ ATOM 23 O PHE D 4 4.863 42.881 67.342 1.00 0.04 \ ATOM 24 CB PHE D 4 4.605 40.222 65.913 1.00 0.04 \ ATOM 25 CG PHE D 4 6.066 40.015 65.608 1.00 0.04 \ ATOM 26 CD1 PHE D 4 6.775 38.955 66.205 1.00 0.04 \ ATOM 27 CD2 PHE D 4 6.740 40.886 64.739 1.00 0.04 \ ATOM 28 CE1 PHE D 4 8.164 38.754 65.945 1.00 0.04 \ ATOM 29 CE2 PHE D 4 8.132 40.696 64.470 1.00 0.04 \ ATOM 30 CZ PHE D 4 8.833 39.626 65.078 1.00 0.04 \ ATOM 31 N LEU D 5 6.032 41.526 68.750 1.00 0.08 \ ATOM 32 CA LEU D 5 6.888 42.520 69.381 1.00 0.08 \ ATOM 33 C LEU D 5 6.186 43.600 70.204 1.00 0.08 \ ATOM 34 O LEU D 5 6.852 44.501 70.734 1.00 0.08 \ ATOM 35 CB LEU D 5 7.930 43.117 68.410 1.00 0.08 \ ATOM 36 CG LEU D 5 8.988 42.128 67.889 1.00 0.08 \ ATOM 37 CD1 LEU D 5 9.955 42.932 67.020 1.00 0.08 \ ATOM 38 CD2 LEU D 5 9.753 41.384 68.991 1.00 0.08 \ ATOM 63 N LEU D 8 7.543 44.602 73.725 1.00 0.62 \ ATOM 64 CA LEU D 8 8.683 45.485 73.889 1.00 0.62 \ ATOM 65 C LEU D 8 8.163 46.867 74.353 1.00 0.62 \ ATOM 66 O LEU D 8 8.943 47.706 74.792 1.00 0.62 \ ATOM 67 CB LEU D 8 9.452 45.640 72.568 1.00 0.62 \ ATOM 68 CG LEU D 8 10.339 44.448 72.186 1.00 0.62 \ ATOM 69 CD1 LEU D 8 11.072 44.802 70.913 1.00 0.62 \ ATOM 70 CD2 LEU D 8 11.338 44.111 73.285 1.00 0.62 \ ATOM 71 N ARG D 9 6.843 47.069 74.272 1.00 1.29 \ ATOM 72 CA ARG D 9 6.221 48.331 74.677 1.00 1.29 \ ATOM 73 C ARG D 9 5.913 48.270 76.163 1.00 1.29 \ ATOM 74 O ARG D 9 5.678 47.183 76.723 1.00 1.29 \ ATOM 75 CB ARG D 9 4.906 48.562 73.911 1.00 1.29 \ ATOM 76 CG ARG D 9 5.037 48.742 72.387 1.00 1.29 \ ATOM 77 CD ARG D 9 3.648 48.789 71.738 1.00 1.29 \ ATOM 78 NE ARG D 9 2.939 50.057 71.991 1.00 1.29 \ ATOM 79 CZ ARG D 9 1.731 50.346 71.517 1.00 1.29 \ ATOM 80 NH1 ARG D 9 1.051 49.461 70.775 1.00 1.29 \ ATOM 81 NH2 ARG D 9 1.223 51.559 71.708 1.00 1.29 \ ATOM 82 N HIS D 10 5.902 49.443 76.798 1.00 0.62 \ ATOM 83 CA HIS D 10 5.568 49.551 78.225 1.00 0.62 \ ATOM 84 C HIS D 10 4.148 49.028 78.393 1.00 0.62 \ ATOM 85 O HIS D 10 3.266 49.252 77.533 1.00 0.62 \ ATOM 86 CB HIS D 10 5.627 51.031 78.655 1.00 0.62 \ ATOM 87 CG HIS D 10 5.518 51.261 80.134 1.00 0.62 \ ATOM 88 ND1 HIS D 10 6.619 51.274 80.967 1.00 0.62 \ ATOM 89 CD2 HIS D 10 4.445 51.509 80.926 1.00 0.62 \ ATOM 90 CE1 HIS D 10 6.227 51.519 82.206 1.00 0.62 \ ATOM 91 NE2 HIS D 10 4.914 51.666 82.208 1.00 0.62 \ ATOM 92 N SER D 11 3.919 48.402 79.536 1.00 -1.00 \ ATOM 93 CA SER D 11 2.597 47.862 79.871 1.00 -1.00 \ ATOM 94 C SER D 11 1.537 48.957 79.962 1.00 -1.00 \ ATOM 95 O SER D 11 1.853 50.137 80.201 1.00 -1.00 \ ATOM 96 CB SER D 11 2.691 47.067 81.169 1.00 -1.00 \ ATOM 97 OG SER D 11 3.189 47.893 82.201 1.00 -1.00 \ ATOM 98 N SER D 12 0.295 48.588 79.677 1.00 -1.00 \ ATOM 99 CA SER D 12 -0.806 49.529 79.763 1.00 -1.00 \ ATOM 100 C SER D 12 -2.096 48.825 80.073 1.00 -1.00 \ ATOM 101 O SER D 12 -2.580 47.997 79.286 1.00 -1.00 \ ATOM 102 CB SER D 12 -0.953 50.353 78.471 1.00 -1.00 \ ATOM 103 OG SER D 12 -2.229 50.985 78.400 1.00 -1.00 \ ATOM 104 N LEU D 13 -2.720 49.236 81.178 1.00 -1.00 \ ATOM 105 CA LEU D 13 -4.010 48.686 81.573 1.00 -1.00 \ ATOM 106 C LEU D 13 -5.055 48.887 80.467 1.00 -1.00 \ ATOM 107 O LEU D 13 -5.724 47.948 80.046 1.00 -1.00 \ ATOM 108 CB LEU D 13 -4.450 49.349 82.906 1.00 -1.00 \ ATOM 109 CG LEU D 13 -5.853 49.041 83.392 1.00 -1.00 \ ATOM 110 CD1 LEU D 13 -5.929 47.630 83.843 1.00 -1.00 \ ATOM 111 CD2 LEU D 13 -6.217 49.973 84.529 1.00 -1.00 \ ATOM 124 N ARG D 15 -4.647 49.611 77.128 1.00 -1.00 \ ATOM 125 CA ARG D 15 -4.354 48.924 75.871 1.00 -1.00 \ ATOM 126 C ARG D 15 -4.422 47.414 75.940 1.00 -1.00 \ ATOM 127 O ARG D 15 -4.961 46.764 75.038 1.00 -1.00 \ ATOM 128 CB ARG D 15 -2.989 49.360 75.353 1.00 -1.00 \ ATOM 129 CG ARG D 15 -2.665 48.899 73.899 1.00 -1.00 \ ATOM 130 CD ARG D 15 -1.221 49.214 73.546 1.00 -1.00 \ ATOM 131 NE ARG D 15 -0.262 48.409 74.300 1.00 -1.00 \ ATOM 132 CZ ARG D 15 0.688 48.874 75.124 1.00 -1.00 \ ATOM 133 NH1 ARG D 15 0.832 50.182 75.331 1.00 -1.00 \ ATOM 134 NH2 ARG D 15 1.498 48.030 75.755 1.00 -1.00 \ ATOM 147 N CYS D 17 -5.738 45.277 78.758 1.00 1.29 \ ATOM 148 CA CYS D 17 -6.769 44.607 79.524 1.00 1.29 \ ATOM 149 C CYS D 17 -8.185 45.112 79.360 1.00 1.29 \ ATOM 150 O CYS D 17 -9.134 44.431 79.748 1.00 1.29 \ ATOM 151 CB CYS D 17 -6.398 44.643 81.005 1.00 1.29 \ ATOM 152 SG CYS D 17 -4.906 43.721 81.446 1.00 1.29 \ ATOM 153 N ILE D 18 -8.337 46.295 78.784 1.00 -0.93 \ ATOM 154 CA ILE D 18 -9.662 46.865 78.586 1.00 -0.93 \ ATOM 155 C ILE D 18 -9.988 46.864 77.107 1.00 -0.93 \ ATOM 156 O ILE D 18 -11.064 46.390 76.722 1.00 -0.93 \ ATOM 157 CB ILE D 18 -9.772 48.266 79.262 1.00 -0.93 \ ATOM 158 CG1 ILE D 18 -9.710 48.063 80.784 1.00 -0.93 \ ATOM 159 CG2 ILE D 18 -11.082 48.994 78.846 1.00 -0.93 \ ATOM 160 CD1 ILE D 18 -9.304 49.241 81.526 1.00 -0.93 \ ATOM 185 N ILE D 21 -8.297 41.598 75.719 1.00 -1.33 \ ATOM 186 CA ILE D 21 -8.402 40.660 76.823 1.00 -1.33 \ ATOM 187 C ILE D 21 -6.938 40.347 77.240 1.00 -1.33 \ ATOM 188 O ILE D 21 -6.112 40.059 76.375 1.00 -1.33 \ ATOM 189 CB ILE D 21 -9.058 39.342 76.366 1.00 -1.33 \ ATOM 190 CG1 ILE D 21 -10.526 39.620 75.955 1.00 -1.33 \ ATOM 191 CG2 ILE D 21 -8.951 38.306 77.466 1.00 -1.33 \ ATOM 192 CD1 ILE D 21 -11.191 38.479 75.214 1.00 -1.33 \ ATOM 193 N CYS D 22 -6.618 40.399 78.535 1.00 1.29 \ ATOM 194 CA CYS D 22 -5.264 40.071 78.976 1.00 1.29 \ ATOM 195 C CYS D 22 -5.191 38.854 79.879 1.00 1.29 \ ATOM 196 O CYS D 22 -6.119 38.595 80.647 1.00 1.29 \ ATOM 197 CB CYS D 22 -4.585 41.242 79.694 1.00 1.29 \ ATOM 198 SG CYS D 22 -5.397 41.741 81.254 1.00 1.29 \ ATOM 199 N ASP D 23 -4.093 38.097 79.772 1.00 -0.71 \ ATOM 200 CA ASP D 23 -3.900 36.946 80.658 1.00 -0.71 \ ATOM 201 C ASP D 23 -3.285 37.437 81.995 1.00 -0.71 \ ATOM 202 O ASP D 23 -2.943 38.632 82.112 1.00 -0.71 \ ATOM 203 CB ASP D 23 -3.105 35.800 80.001 1.00 -0.71 \ ATOM 204 CG ASP D 23 -1.648 36.142 79.675 1.00 -0.71 \ ATOM 205 OD1 ASP D 23 -0.979 36.945 80.367 1.00 -0.71 \ ATOM 206 OD2 ASP D 23 -1.152 35.527 78.707 1.00 -0.71 \ ATOM 207 N PHE D 24 -3.102 36.524 82.953 1.00 -0.90 \ ATOM 208 CA PHE D 24 -2.620 36.882 84.287 1.00 -0.90 \ ATOM 209 C PHE D 24 -1.242 37.521 84.313 1.00 -0.90 \ ATOM 210 O PHE D 24 -1.051 38.522 84.999 1.00 -0.90 \ ATOM 211 CB PHE D 24 -2.710 35.659 85.212 1.00 -0.90 \ ATOM 212 CG PHE D 24 -2.627 35.967 86.692 1.00 -0.90 \ ATOM 213 CD1 PHE D 24 -3.009 37.221 87.239 1.00 -0.90 \ ATOM 214 CD2 PHE D 24 -2.152 34.977 87.557 1.00 -0.90 \ ATOM 215 CE1 PHE D 24 -2.907 37.471 88.619 1.00 -0.90 \ ATOM 216 CE2 PHE D 24 -2.046 35.210 88.951 1.00 -0.90 \ ATOM 217 CZ PHE D 24 -2.427 36.468 89.480 1.00 -0.90 \ ATOM 242 N ALA D 27 -1.350 41.030 83.181 1.00 0.62 \ ATOM 243 CA ALA D 27 -1.916 41.837 84.264 1.00 0.62 \ ATOM 244 C ALA D 27 -0.827 42.133 85.318 1.00 0.62 \ ATOM 245 O ALA D 27 -0.665 43.284 85.732 1.00 0.62 \ ATOM 246 CB ALA D 27 -3.141 41.117 84.887 1.00 0.62 \ ATOM 247 N LYS D 28 -0.057 41.115 85.703 1.00 0.62 \ ATOM 248 CA LYS D 28 1.023 41.286 86.680 1.00 0.62 \ ATOM 249 C LYS D 28 2.085 42.264 86.198 1.00 0.62 \ ATOM 250 O LYS D 28 2.649 43.030 86.999 1.00 0.62 \ ATOM 251 CB LYS D 28 1.628 39.948 87.095 1.00 0.62 \ ATOM 252 CG LYS D 28 0.691 39.203 88.001 1.00 0.62 \ ATOM 253 CD LYS D 28 1.315 37.979 88.611 1.00 0.62 \ ATOM 254 CE LYS D 28 1.182 36.761 87.734 1.00 0.62 \ ATOM 255 NZ LYS D 28 1.483 35.513 88.522 1.00 0.62 \ ATOM 268 N ILE D 30 1.404 44.863 84.339 1.00 0.11 \ ATOM 269 CA ILE D 30 0.789 46.197 84.549 1.00 0.11 \ ATOM 270 C ILE D 30 0.910 46.628 86.022 1.00 0.11 \ ATOM 271 O ILE D 30 1.360 47.753 86.300 1.00 0.11 \ ATOM 272 CB ILE D 30 -0.716 46.201 84.149 1.00 0.11 \ ATOM 273 CG1 ILE D 30 -0.831 46.059 82.625 1.00 0.11 \ ATOM 274 CG2 ILE D 30 -1.436 47.528 84.567 1.00 0.11 \ ATOM 275 CD1 ILE D 30 -2.167 45.506 82.172 1.00 0.11 \ ATOM 276 N PHE D 31 0.596 45.714 86.953 1.00 -0.90 \ ATOM 277 CA PHE D 31 0.605 46.046 88.396 1.00 -0.90 \ ATOM 278 C PHE D 31 2.006 46.429 88.898 1.00 -0.90 \ ATOM 279 O PHE D 31 2.158 47.385 89.645 1.00 -0.90 \ ATOM 280 CB PHE D 31 0.029 44.895 89.254 1.00 -0.90 \ ATOM 281 CG PHE D 31 -1.326 44.387 88.802 1.00 -0.90 \ ATOM 282 CD1 PHE D 31 -2.260 45.236 88.183 1.00 -0.90 \ ATOM 283 CD2 PHE D 31 -1.639 43.033 88.960 1.00 -0.90 \ ATOM 284 CE1 PHE D 31 -3.498 44.742 87.710 1.00 -0.90 \ ATOM 285 CE2 PHE D 31 -2.876 42.515 88.493 1.00 -0.90 \ ATOM 286 CZ PHE D 31 -3.799 43.357 87.870 1.00 -0.90 \ ATOM 287 N GLN D 32 3.019 45.775 88.329 1.00 0.62 \ ATOM 288 CA GLN D 32 4.426 45.989 88.673 1.00 0.62 \ ATOM 289 C GLN D 32 4.994 47.315 88.127 1.00 0.62 \ ATOM 290 O GLN D 32 5.793 47.970 88.790 1.00 0.62 \ ATOM 291 CB GLN D 32 5.225 44.822 88.083 1.00 0.62 \ ATOM 292 CG GLN D 32 6.505 44.437 88.785 1.00 0.62 \ ATOM 293 CD GLN D 32 7.111 43.171 88.180 1.00 0.62 \ ATOM 294 OE1 GLN D 32 7.499 43.144 86.996 1.00 0.62 \ ATOM 295 NE2 GLN D 32 7.171 42.106 88.983 1.00 0.62 \ ATOM 296 N ASN D 33 4.519 47.732 86.953 1.00 -0.42 \ ATOM 297 CA ASN D 33 5.012 48.933 86.279 1.00 -0.42 \ ATOM 298 C ASN D 33 4.079 50.148 86.220 1.00 -0.42 \ ATOM 299 O ASN D 33 3.232 50.309 87.128 1.00 -0.42 \ ATOM 300 CB ASN D 33 5.495 48.546 84.868 1.00 -0.42 \ ATOM 301 CG ASN D 33 6.674 47.576 84.900 1.00 -0.42 \ ATOM 302 OD1 ASN D 33 7.823 47.992 85.076 1.00 -0.42 \ ATOM 303 ND2 ASN D 33 6.389 46.271 84.769 1.00 -0.42 \ ATOM 304 OXT ASN D 33 4.249 50.970 85.293 1.00 -0.42 \ """, "e1lqvD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1lqvD1_csv", state=0, origin=1) cmd.zoom("e1lqvD1_csv", animate=-1)