cmd.read_pdbstr("""\ ATOM 1 CA GLY 3 1 67.898 -7.683 98.379 1.00 -1.00 \ ATOM 2 CA PHE 3 2 66.854 -4.253 97.027 1.00 -1.00 \ ATOM 3 CA PRO 3 3 69.504 -1.544 97.578 1.00 -1.00 \ ATOM 4 CA VAL 3 4 67.983 1.075 99.886 1.00 -1.00 \ ATOM 5 CA LEU 3 5 69.435 4.104 101.757 1.00 -1.00 \ ATOM 6 CA ASN 3 6 67.984 5.896 104.790 1.00 -1.00 \ ATOM 7 CA THR 3 7 67.363 9.616 104.940 1.00 -1.00 \ ATOM 8 CA PRO 3 8 67.402 11.720 108.101 1.00 -1.00 \ ATOM 9 CA GLY 3 9 64.132 11.206 109.929 1.00 -1.00 \ ATOM 10 CA SER 3 10 64.360 7.425 110.241 1.00 -1.00 \ ATOM 11 CA ASN 3 11 63.022 5.831 113.450 1.00 -1.00 \ ATOM 12 CA GLN 3 12 61.706 9.206 114.634 1.00 -1.00 \ ATOM 13 CA PHE 3 13 58.266 9.597 116.219 1.00 -1.00 \ ATOM 14 CA MET 3 14 56.611 12.836 115.078 1.00 -0.01 \ ATOM 15 CA THR 3 15 53.462 13.522 117.123 1.00 1.92 \ ATOM 16 CA SER 3 16 51.673 14.810 114.023 1.00 2.21 \ ATOM 17 CA ASP 3 17 52.819 12.184 111.485 1.00 0.42 \ ATOM 18 CA ASP 3 18 50.363 10.371 109.226 1.00 0.07 \ ATOM 19 CA PHE 3 19 51.466 6.766 108.560 1.00 -0.19 \ ATOM 20 CA GLN 3 20 50.029 3.241 108.234 1.00 0.05 \ ATOM 21 CA SER 3 21 50.439 0.884 111.181 1.00 0.15 \ ATOM 22 CA PRO 3 22 49.611 -2.831 111.328 1.00 0.54 \ ATOM 23 CA SER 3 23 46.247 -3.607 112.951 1.00 -0.79 \ ATOM 24 CA ALA 3 24 46.581 -5.458 116.239 1.00 0.12 \ ATOM 25 CA MET 3 25 43.092 -6.959 115.720 1.00 -1.00 \ ATOM 26 CA PRO 3 26 42.835 -8.594 112.233 1.00 2.12 \ ATOM 27 CA GLN 3 27 39.525 -9.214 110.423 1.00 -1.09 \ ATOM 28 CA PHE 3 28 37.799 -7.592 113.399 1.00 -0.81 \ ATOM 29 CA ASP 3 29 34.146 -6.796 112.610 1.00 -0.66 \ ATOM 30 CA VAL 3 30 33.290 -3.265 113.747 1.00 -0.60 \ ATOM 31 CA THR 3 31 29.744 -2.716 115.177 1.00 0.15 \ ATOM 32 CA PRO 3 32 27.777 -1.149 112.303 1.00 0.09 \ ATOM 33 CA HIS 3 33 27.244 2.606 112.221 1.00 -0.76 \ ATOM 34 CA MET 3 34 24.077 4.342 113.289 1.00 -0.54 \ ATOM 35 CA ASP 3 35 22.801 7.749 112.265 1.00 -0.57 \ ATOM 36 CA ILE 3 36 23.061 9.795 115.473 1.00 -0.14 \ ATOM 37 CA PRO 3 37 21.708 13.403 115.345 1.00 0.15 \ ATOM 38 CA GLY 3 38 23.878 16.487 115.049 1.00 2.14 \ ATOM 39 CA GLU 3 39 27.183 15.328 113.615 1.00 -0.12 \ ATOM 40 CA VAL 3 40 30.050 17.818 113.645 1.00 0.04 \ ATOM 41 CA HIS 3 41 32.257 17.862 110.556 1.00 0.27 \ ATOM 42 CA ASN 3 42 34.367 20.978 111.167 1.00 0.05 \ ATOM 43 CA LEU 3 43 35.004 22.931 114.391 1.00 -0.63 \ ATOM 44 CA MET 3 44 33.701 26.069 112.709 1.00 -0.73 \ ATOM 45 CA GLU 3 45 30.183 24.639 112.720 1.00 -0.06 \ ATOM 46 CA ILE 3 46 30.430 25.118 116.511 1.00 -0.59 \ ATOM 47 CA ALA 3 47 32.055 28.570 116.371 1.00 0.14 \ ATOM 48 CA GLU 3 48 29.191 29.769 114.179 1.00 -0.09 \ ATOM 49 CA VAL 3 49 26.773 29.170 117.054 1.00 0.32 \ ATOM 50 CA ASP 3 50 25.796 32.038 119.376 1.00 0.11 \ ATOM 51 CA SER 3 51 26.917 31.613 123.003 1.00 -0.21 \ ATOM 52 CA VAL 3 52 26.162 34.129 125.782 1.00 -0.43 \ ATOM 53 CA VAL 3 53 29.107 36.497 126.444 1.00 0.30 \ ATOM 54 CA PRO 3 54 30.013 37.371 130.081 1.00 -1.00 \ ATOM 55 CA VAL 3 55 30.382 41.144 129.508 1.00 -1.00 \ ATOM 56 CA ASN 3 56 30.008 42.048 133.188 1.00 -1.00 \ ATOM 57 CA ASN 3 57 33.169 40.116 134.239 1.00 -1.00 \ ATOM 58 CA ILE 3 58 33.628 42.719 136.890 1.00 -1.00 \ ATOM 59 CA LYS 3 59 34.394 41.368 140.330 1.00 -1.00 \ ATOM 60 CA VAL 3 60 32.526 38.412 141.711 1.00 -1.00 \ ATOM 61 CA ASN 3 61 29.816 38.530 139.079 1.00 -1.00 \ ATOM 62 CA LEU 3 62 32.086 36.189 137.198 1.00 -1.00 \ ATOM 63 CA GLN 3 63 31.045 33.589 139.802 1.00 -1.00 \ ATOM 64 CA SER 3 64 27.415 34.110 138.837 1.00 -1.00 \ ATOM 65 CA MET 3 65 24.805 34.562 136.106 1.00 -1.00 \ ATOM 66 CA ASP 3 66 25.490 38.273 136.506 1.00 -1.00 \ ATOM 67 CA ALA 3 67 28.583 37.976 134.381 1.00 -1.00 \ ATOM 68 CA TYR 3 68 26.007 37.511 131.596 1.00 -0.71 \ ATOM 69 CA HIS 3 69 23.846 40.572 132.241 1.00 -0.71 \ ATOM 70 CA ILE 3 70 24.550 43.988 130.757 1.00 -0.54 \ ATOM 71 CA GLU 3 71 22.824 46.606 132.986 1.00 -0.52 \ ATOM 72 CA VAL 3 72 20.780 49.190 131.155 1.00 0.84 \ ATOM 73 CA ASN 3 73 18.991 51.955 133.028 1.00 -0.71 \ ATOM 74 CA THR 3 74 16.849 55.067 132.532 1.00 -0.40 \ ATOM 75 CA GLY 3 75 19.183 58.080 132.819 1.00 0.12 \ ATOM 76 CA ASN 3 76 19.069 61.857 132.945 1.00 -1.00 \ ATOM 77 CA HIS 3 77 21.092 62.096 129.745 1.00 -1.03 \ ATOM 78 CA GLN 3 78 22.288 60.128 126.726 1.00 -0.61 \ ATOM 79 CA GLY 3 79 25.763 59.526 125.296 1.00 -0.71 \ ATOM 80 CA GLU 3 80 26.727 57.508 128.347 1.00 -1.35 \ ATOM 81 CA LYS 3 81 28.726 54.314 127.787 1.00 -1.18 \ ATOM 82 CA ILE 3 82 26.956 51.003 128.374 1.00 -0.57 \ ATOM 83 CA PHE 3 83 30.017 48.732 127.934 1.00 -1.24 \ ATOM 84 CA ALA 3 84 33.364 48.340 126.231 1.00 -1.28 \ ATOM 85 CA PHE 3 85 35.679 45.466 125.408 1.00 -0.76 \ ATOM 86 CA GLN 3 86 38.419 45.031 122.783 1.00 -0.73 \ ATOM 87 CA MET 3 87 38.294 42.862 119.703 1.00 0.54 \ ATOM 88 CA GLN 3 88 40.305 39.875 121.011 1.00 -0.49 \ ATOM 89 CA PRO 3 89 38.041 36.790 120.630 1.00 -1.00 \ ATOM 90 CA GLY 3 90 40.589 34.364 122.036 1.00 -1.00 \ ATOM 91 CA LEU 3 91 42.353 36.659 124.498 1.00 -1.00 \ ATOM 92 CA GLU 3 92 39.975 39.120 126.237 1.00 -1.28 \ ATOM 93 CA SER 3 93 38.498 37.734 129.446 1.00 -1.08 \ ATOM 94 CA VAL 3 94 35.110 38.476 127.867 1.00 -1.16 \ ATOM 95 CA PHE 3 95 35.523 36.278 124.761 1.00 0.62 \ ATOM 96 CA LYS 3 96 38.164 33.836 125.982 1.00 -1.34 \ ATOM 97 CA ARG 3 97 35.630 31.487 127.557 1.00 -0.75 \ ATOM 98 CA THR 3 98 32.915 31.725 124.861 1.00 0.46 \ ATOM 99 CA LEU 3 99 32.175 28.854 122.408 1.00 -1.16 \ ATOM 100 CA MET 3 100 34.203 30.916 119.887 1.00 0.42 \ ATOM 101 CA GLY 3 101 36.981 31.735 122.370 1.00 0.38 \ ATOM 102 CA GLU 3 102 37.526 28.127 123.523 1.00 -1.03 \ ATOM 103 CA ILE 3 103 37.946 26.858 119.961 1.00 -0.13 \ ATOM 104 CA LEU 3 104 40.152 29.830 119.133 1.00 -0.34 \ ATOM 105 CA ASN 3 105 42.431 28.876 122.036 1.00 -0.85 \ ATOM 106 CA TYR 3 106 43.401 25.636 120.318 1.00 -0.90 \ ATOM 107 CA TYR 3 107 44.644 27.597 117.293 1.00 2.50 \ ATOM 108 CA ALA 3 108 47.368 30.241 116.844 1.00 -0.18 \ ATOM 109 CA HIS 3 109 45.940 32.484 114.072 1.00 -0.24 \ ATOM 110 CA TRP 3 110 42.369 33.563 113.280 1.00 -0.32 \ ATOM 111 CA SER 3 111 40.646 35.606 110.596 1.00 1.53 \ ATOM 112 CA GLY 3 112 37.091 36.646 109.941 1.00 0.78 \ ATOM 113 CA SER 3 113 34.054 38.618 110.972 1.00 1.20 \ ATOM 114 CA ILE 3 114 32.066 38.236 114.187 1.00 0.40 \ ATOM 115 CA LYS 3 115 28.384 38.781 115.017 1.00 -0.99 \ ATOM 116 CA LEU 3 116 27.457 40.348 118.352 1.00 0.99 \ ATOM 117 CA THR 3 117 23.702 39.780 118.720 1.00 -0.57 \ ATOM 118 CA PHE 3 118 22.287 41.963 121.546 1.00 1.20 \ ATOM 119 CA THR 3 119 18.943 40.949 123.054 1.00 0.10 \ ATOM 120 CA PHE 3 120 16.884 43.417 125.125 1.00 0.50 \ ATOM 121 CA CYS 3 121 15.469 41.758 128.268 1.00 0.29 \ ATOM 122 CA GLY 3 122 13.440 44.604 129.713 1.00 0.43 \ ATOM 123 CA SER 3 123 9.688 45.009 130.070 1.00 0.77 \ ATOM 124 CA ALA 3 124 7.518 45.056 126.991 1.00 -0.16 \ ATOM 125 CA MET 3 125 6.821 48.709 127.828 1.00 0.40 \ ATOM 126 CA ALA 3 126 10.440 49.963 127.800 1.00 -0.05 \ ATOM 127 CA THR 3 127 11.913 51.734 124.761 1.00 -0.27 \ ATOM 128 CA GLY 3 128 15.332 53.058 123.832 1.00 2.89 \ ATOM 129 CA LYS 3 129 17.986 53.421 121.169 1.00 0.34 \ ATOM 130 CA LEU 3 130 21.640 52.406 121.503 1.00 1.21 \ ATOM 131 CA LEU 3 131 24.705 53.184 119.390 1.00 0.37 \ ATOM 132 CA LEU 3 132 26.584 49.890 118.926 1.00 1.14 \ ATOM 133 CA ALA 3 133 30.026 50.753 117.494 1.00 0.38 \ ATOM 134 CA TYR 3 134 33.350 49.168 116.459 1.00 0.39 \ ATOM 135 CA SER 3 135 36.363 51.484 116.120 1.00 -0.42 \ ATOM 136 CA PRO 3 136 39.491 50.003 114.500 1.00 3.93 \ ATOM 137 CA PRO 3 137 42.847 50.539 116.266 1.00 0.07 \ ATOM 138 CA GLY 3 138 45.087 53.501 115.582 1.00 -1.10 \ ATOM 139 CA ALA 3 139 43.794 56.152 117.962 1.00 -1.20 \ ATOM 140 CA ASP 3 140 42.541 55.037 121.375 1.00 -1.46 \ ATOM 141 CA VAL 3 141 39.095 53.765 122.313 1.00 -1.50 \ ATOM 142 CA PRO 3 142 36.208 56.209 121.783 1.00 -1.07 \ ATOM 143 CA ALA 3 143 35.572 57.961 125.071 1.00 -1.16 \ ATOM 144 CA THR 3 144 32.454 59.827 123.935 1.00 -0.58 \ ATOM 145 CA ARG 3 145 29.554 58.799 121.741 1.00 -0.48 \ ATOM 146 CA LYS 3 146 30.827 61.526 119.417 1.00 -0.85 \ ATOM 147 CA GLN 3 147 34.077 59.582 118.932 1.00 -0.10 \ ATOM 148 CA ALA 3 148 32.337 56.210 118.631 1.00 0.01 \ ATOM 149 CA MET 3 149 30.344 58.066 115.961 1.00 0.14 \ ATOM 150 CA LEU 3 150 32.980 58.086 113.294 1.00 -1.03 \ ATOM 151 CA GLY 3 151 33.500 54.354 113.643 1.00 -0.26 \ ATOM 152 CA THR 3 152 31.547 51.449 112.181 1.00 0.49 \ ATOM 153 CA HIS 3 153 28.274 51.677 114.057 1.00 0.81 \ ATOM 154 CA MET 3 154 24.668 50.462 114.059 1.00 -0.26 \ ATOM 155 CA ILE 3 155 21.935 52.448 115.857 1.00 0.25 \ ATOM 156 CA TRP 3 156 19.681 49.915 117.594 1.00 0.53 \ ATOM 157 CA ASP 3 157 16.034 50.766 118.135 1.00 2.66 \ ATOM 158 CA ILE 3 158 14.463 48.523 120.768 1.00 0.37 \ ATOM 159 CA GLY 3 159 11.100 47.196 119.594 1.00 0.32 \ ATOM 160 CA LEU 3 160 9.341 43.913 118.641 1.00 -0.15 \ ATOM 161 CA GLN 3 161 12.619 42.540 117.250 1.00 0.18 \ ATOM 162 CA SER 3 162 14.199 42.242 120.679 1.00 1.25 \ ATOM 163 CA SER 3 163 17.699 41.636 119.305 1.00 0.34 \ ATOM 164 CA CYS 3 164 20.014 43.628 117.032 1.00 -0.17 \ ATOM 165 CA VAL 3 165 23.184 42.301 115.379 1.00 0.21 \ ATOM 166 CA LEU 3 166 26.268 44.523 115.350 1.00 1.50 \ ATOM 167 CA CYS 3 167 28.466 42.740 112.798 1.00 -1.07 \ ATOM 168 CA ILE 3 168 32.202 43.447 113.136 1.00 1.56 \ ATOM 169 CA PRO 3 169 34.054 43.304 109.789 1.00 4.99 \ ATOM 170 CA TRP 3 170 37.567 42.083 109.220 1.00 2.40 \ ATOM 171 CA ILE 3 171 39.566 45.266 108.937 1.00 0.31 \ ATOM 172 CA SER 3 172 43.183 44.202 109.284 1.00 0.52 \ ATOM 173 CA GLN 3 173 46.519 44.992 107.710 1.00 -0.93 \ ATOM 174 CA THR 3 174 47.255 41.234 107.642 1.00 -0.30 \ ATOM 175 CA HIS 3 175 45.327 38.186 106.450 1.00 -0.78 \ ATOM 176 CA TYR 3 176 45.189 36.616 109.892 1.00 -0.85 \ ATOM 177 CA ARG 3 177 45.696 37.813 113.439 1.00 -0.81 \ ATOM 178 CA LEU 3 178 47.221 36.148 116.461 1.00 -1.16 \ ATOM 179 CA VAL 3 179 44.757 34.524 118.841 1.00 -0.98 \ ATOM 180 CA GLN 3 180 47.115 35.560 121.649 1.00 -1.58 \ ATOM 181 CA GLN 3 181 47.720 39.295 122.004 1.00 -1.15 \ ATOM 182 CA ASP 3 182 50.256 41.255 119.928 1.00 -1.00 \ ATOM 183 CA GLU 3 183 49.966 45.003 119.232 1.00 -0.78 \ ATOM 184 CA TYR 3 184 51.126 44.461 115.670 1.00 -0.60 \ ATOM 185 CA THR 3 185 48.068 42.267 115.360 1.00 -0.41 \ ATOM 186 CA SER 3 186 45.845 44.778 117.252 1.00 -1.04 \ ATOM 187 CA ALA 3 187 42.077 44.459 116.774 1.00 -1.40 \ ATOM 188 CA GLY 3 188 39.988 47.443 117.850 1.00 1.55 \ ATOM 189 CA ASN 3 189 37.319 48.364 120.368 1.00 -1.25 \ ATOM 190 CA VAL 3 190 33.666 47.569 120.769 1.00 1.71 \ ATOM 191 CA THR 3 191 31.657 50.162 122.732 1.00 -0.46 \ ATOM 192 CA CYS 3 192 27.939 50.850 123.339 1.00 1.39 \ ATOM 193 CA TRP 3 193 26.339 54.215 124.111 1.00 -0.51 \ ATOM 194 CA TYR 3 194 22.874 55.528 124.847 1.00 0.92 \ ATOM 195 CA GLN 3 195 21.488 57.130 121.717 1.00 -0.36 \ ATOM 196 CA THR 3 196 18.224 58.216 123.345 1.00 0.52 \ ATOM 197 CA GLY 3 197 17.850 57.352 127.033 1.00 0.08 \ ATOM 198 CA ILE 3 198 15.578 54.358 128.161 1.00 2.56 \ ATOM 199 CA VAL 3 199 11.957 55.580 128.460 1.00 -0.45 \ ATOM 200 CA VAL 3 200 9.534 53.554 130.605 1.00 -0.72 \ ATOM 201 CA PRO 3 201 5.875 54.206 131.628 1.00 0.15 \ ATOM 202 CA PRO 3 202 4.734 54.447 135.207 1.00 -0.69 \ ATOM 203 CA GLY 3 203 4.608 51.059 137.016 1.00 -0.03 \ ATOM 204 CA THR 3 204 7.141 49.363 134.704 1.00 0.21 \ ATOM 205 CA PRO 3 205 10.743 48.766 135.800 1.00 0.88 \ ATOM 206 CA ASN 3 206 13.294 51.408 134.658 1.00 -0.32 \ ATOM 207 CA LYS 3 207 16.403 49.248 134.931 1.00 -0.93 \ ATOM 208 CA CYS 3 208 16.656 46.358 132.471 1.00 -0.15 \ ATOM 209 CA VAL 3 209 19.255 43.974 131.126 1.00 -0.84 \ ATOM 210 CA VAL 3 210 20.729 43.173 127.771 1.00 0.94 \ ATOM 211 CA LEU 3 211 22.526 39.963 126.777 1.00 -0.26 \ ATOM 212 CA CYS 3 212 25.278 39.627 124.212 1.00 -0.18 \ ATOM 213 CA PHE 3 213 25.900 36.577 121.985 1.00 -0.35 \ ATOM 214 CA ALA 3 214 29.085 35.772 120.016 1.00 0.38 \ ATOM 215 CA SER 3 215 29.224 33.733 116.800 1.00 0.27 \ ATOM 216 CA ALA 3 216 31.535 33.633 113.788 1.00 1.03 \ ATOM 217 CA CYS 3 217 30.623 34.716 110.266 1.00 -0.47 \ ATOM 218 CA ASN 3 218 30.930 32.679 107.055 1.00 -1.00 \ ATOM 219 CA ASP 3 219 34.423 34.063 106.483 1.00 0.89 \ ATOM 220 CA PHE 3 220 35.846 33.091 109.846 1.00 0.01 \ ATOM 221 CA SER 3 221 38.730 30.585 109.970 1.00 -0.24 \ ATOM 222 CA VAL 3 222 41.390 29.554 112.521 1.00 0.89 \ ATOM 223 CA ARG 3 223 44.939 28.344 111.807 1.00 -0.04 \ ATOM 224 CA MET 3 224 48.052 26.672 113.334 1.00 0.23 \ ATOM 225 CA LEU 3 225 46.966 24.140 115.952 1.00 0.98 \ ATOM 226 CA ARG 3 226 48.386 24.311 119.523 1.00 0.57 \ ATOM 227 CA ASP 3 227 47.255 23.378 123.073 1.00 -0.11 \ ATOM 228 CA THR 3 228 44.772 25.481 125.108 1.00 -1.00 \ ATOM 229 CA PRO 3 229 46.262 27.151 128.141 1.00 -1.00 \ ATOM 230 CA PHE 3 230 42.876 26.494 129.852 1.00 -1.00 \ ATOM 231 CA ILE 3 231 43.405 22.899 131.007 1.00 -1.00 \ ATOM 232 CA GLY 3 232 46.148 22.034 133.497 1.00 -1.00 \ ATOM 233 CA GLN 3 233 47.210 18.887 135.330 1.00 -1.00 \ ATOM 234 CA THR 3 234 49.539 18.030 138.244 1.00 -1.00 \ ATOM 235 CA ALA 3 235 49.109 14.187 138.328 1.00 -1.00 \ ATOM 236 CA LEU 3 236 47.172 11.594 136.340 1.00 -1.00 \ ATOM 237 CA LEU 3 237 43.584 11.762 137.571 1.00 -1.00 \ ATOM 238 CA GLN 3 238 42.303 8.684 139.362 1.00 -1.00 \ """, "e1m1131_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1m1131_csv", state=0, origin=1) cmd.zoom("e1m1131_csv", animate=-1)