cmd.read_pdbstr("""\ ATOM 1 N SER B 1 80.404 27.477 46.861 1.00 -1.00 \ ATOM 2 CA SER B 1 79.727 27.634 45.546 1.00 -1.00 \ ATOM 3 C SER B 1 78.260 27.242 45.631 1.00 -1.00 \ ATOM 4 O SER B 1 77.891 26.291 46.328 1.00 -1.00 \ ATOM 5 CB SER B 1 80.421 26.787 44.485 1.00 -1.00 \ ATOM 6 OG SER B 1 81.801 27.093 44.426 1.00 -1.00 \ ATOM 7 N ASN B 2 77.430 27.971 44.891 1.00 -1.00 \ ATOM 8 CA ASN B 2 75.995 27.726 44.879 1.00 -1.00 \ ATOM 9 C ASN B 2 75.660 26.502 44.027 1.00 -1.00 \ ATOM 10 O ASN B 2 76.195 26.337 42.925 1.00 -1.00 \ ATOM 11 CB ASN B 2 75.250 28.953 44.329 1.00 -1.00 \ ATOM 12 CG ASN B 2 75.435 30.204 45.190 1.00 -1.00 \ ATOM 13 OD1 ASN B 2 75.583 30.124 46.406 1.00 -1.00 \ ATOM 14 ND2 ASN B 2 75.405 31.366 44.548 1.00 -1.00 \ ATOM 15 N ALA B 3 74.762 25.660 44.527 1.00 0.58 \ ATOM 16 CA ALA B 3 74.208 24.552 43.742 1.00 0.58 \ ATOM 17 C ALA B 3 73.316 25.057 42.597 1.00 0.58 \ ATOM 18 O ALA B 3 73.158 24.385 41.578 1.00 0.58 \ ATOM 19 CB ALA B 3 73.413 23.625 44.645 1.00 0.58 \ ATOM 20 N MET B 4 72.713 26.226 42.794 1.00 0.58 \ ATOM 21 CA MET B 4 71.860 26.866 41.797 1.00 0.58 \ ATOM 22 C MET B 4 71.850 28.370 42.044 1.00 0.58 \ ATOM 23 O MET B 4 72.297 28.845 43.087 1.00 0.58 \ ATOM 24 CB MET B 4 70.423 26.312 41.867 1.00 0.58 \ ATOM 25 CG MET B 4 69.739 26.473 43.237 1.00 0.58 \ ATOM 26 SD MET B 4 68.032 25.862 43.300 1.00 0.58 \ ATOM 27 CE MET B 4 67.184 27.192 42.430 1.00 0.58 \ ATOM 28 N PHE B 5 71.331 29.128 41.087 1.00 0.58 \ ATOM 29 CA PHE B 5 70.976 30.514 41.357 1.00 0.58 \ ATOM 30 C PHE B 5 69.758 30.916 40.542 1.00 0.58 \ ATOM 31 O PHE B 5 69.811 30.968 39.316 1.00 0.58 \ ATOM 32 CB PHE B 5 72.124 31.501 41.117 1.00 0.58 \ ATOM 33 CG PHE B 5 71.802 32.860 41.656 1.00 0.58 \ ATOM 34 CD1 PHE B 5 72.059 33.168 42.985 1.00 0.58 \ ATOM 35 CD2 PHE B 5 71.104 33.785 40.884 1.00 0.58 \ ATOM 36 CE1 PHE B 5 71.687 34.405 43.513 1.00 0.58 \ ATOM 37 CE2 PHE B 5 70.727 35.002 41.403 1.00 0.58 \ ATOM 38 CZ PHE B 5 71.015 35.314 42.720 1.00 0.58 \ ATOM 39 N CYS B 6 68.661 31.212 41.235 1.00 0.58 \ ATOM 40 CA CYS B 6 67.434 31.676 40.589 1.00 0.58 \ ATOM 41 C CYS B 6 66.811 32.751 41.480 1.00 0.58 \ ATOM 42 O CYS B 6 66.718 32.570 42.699 1.00 0.58 \ ATOM 43 CB CYS B 6 66.485 30.491 40.343 1.00 0.58 \ ATOM 44 SG CYS B 6 64.979 30.896 39.414 1.00 0.58 \ ATOM 45 N TYR B 7 66.418 33.875 40.875 1.00 -1.60 \ ATOM 46 CA TYR B 7 65.806 34.997 41.597 1.00 -1.60 \ ATOM 47 C TYR B 7 64.638 35.644 40.841 1.00 -1.60 \ ATOM 48 O TYR B 7 64.330 36.819 41.052 1.00 -1.60 \ ATOM 49 CB TYR B 7 66.855 36.052 42.035 1.00 -1.60 \ ATOM 50 CG TYR B 7 67.615 36.844 40.968 1.00 -1.60 \ ATOM 51 CD1 TYR B 7 67.518 36.580 39.599 1.00 -1.60 \ ATOM 52 CD2 TYR B 7 68.474 37.860 41.364 1.00 -1.60 \ ATOM 53 CE1 TYR B 7 68.264 37.319 38.666 1.00 -1.60 \ ATOM 54 CE2 TYR B 7 69.214 38.597 40.444 1.00 -1.60 \ ATOM 55 CZ TYR B 7 69.103 38.322 39.099 1.00 -1.60 \ ATOM 56 OH TYR B 7 69.829 39.041 38.159 1.00 -1.60 \ ATOM 57 N GLN B 8 63.978 34.871 39.979 1.00 0.58 \ ATOM 58 CA GLN B 8 62.991 35.431 39.045 1.00 0.58 \ ATOM 59 C GLN B 8 61.585 35.693 39.597 1.00 0.58 \ ATOM 60 O GLN B 8 60.804 36.366 38.918 1.00 0.58 \ ATOM 61 CB GLN B 8 62.879 34.555 37.792 1.00 0.58 \ ATOM 62 CG GLN B 8 62.274 33.176 38.017 1.00 0.58 \ ATOM 63 CD GLN B 8 61.929 32.468 36.720 1.00 0.58 \ ATOM 64 OE1 GLN B 8 61.960 33.071 35.643 1.00 0.58 \ ATOM 65 NE2 GLN B 8 61.588 31.183 36.815 1.00 0.58 \ ATOM 66 N CYS B 9 61.238 35.153 40.771 1.00 0.58 \ ATOM 67 CA CYS B 9 59.898 35.365 41.337 1.00 0.58 \ ATOM 68 C CYS B 9 59.942 36.121 42.668 1.00 0.58 \ ATOM 69 O CYS B 9 61.001 36.286 43.295 1.00 0.58 \ ATOM 70 CB CYS B 9 59.104 34.050 41.465 1.00 0.58 \ ATOM 71 SG CYS B 9 59.406 33.058 42.952 1.00 0.58 \ ATOM 72 N GLN B 10 58.771 36.570 43.101 1.00 0.58 \ ATOM 73 CA GLN B 10 58.662 37.431 44.260 1.00 0.58 \ ATOM 74 C GLN B 10 59.097 36.740 45.554 1.00 0.58 \ ATOM 75 O GLN B 10 59.565 37.414 46.476 1.00 0.58 \ ATOM 76 CB GLN B 10 57.228 37.974 44.360 1.00 0.58 \ ATOM 77 CG GLN B 10 56.975 38.951 45.495 1.00 0.58 \ ATOM 78 CD GLN B 10 56.695 38.278 46.824 1.00 0.58 \ ATOM 79 OE1 GLN B 10 56.029 37.237 46.873 1.00 0.58 \ ATOM 80 NE2 GLN B 10 57.218 38.857 47.904 1.00 0.58 \ ATOM 81 N GLU B 11 58.963 35.414 45.612 1.00 0.58 \ ATOM 82 CA GLU B 11 59.235 34.633 46.823 1.00 0.58 \ ATOM 83 C GLU B 11 60.690 34.158 46.966 1.00 0.58 \ ATOM 84 O GLU B 11 61.008 33.399 47.891 1.00 0.58 \ ATOM 85 CB GLU B 11 58.284 33.418 46.898 1.00 0.58 \ ATOM 86 CG GLU B 11 56.840 33.812 47.191 1.00 0.58 \ ATOM 87 CD GLU B 11 55.847 32.660 47.239 1.00 0.58 \ ATOM 88 OE1 GLU B 11 56.258 31.477 47.302 1.00 0.58 \ ATOM 89 OE2 GLU B 11 54.630 32.970 47.232 1.00 0.58 \ ATOM 90 N THR B 12 61.585 34.602 46.083 1.00 0.58 \ ATOM 91 CA THR B 12 62.977 34.162 46.146 1.00 0.58 \ ATOM 92 C THR B 12 63.587 34.366 47.553 1.00 0.58 \ ATOM 93 O THR B 12 63.292 35.348 48.243 1.00 0.58 \ ATOM 94 CB THR B 12 63.801 34.856 45.026 1.00 0.58 \ ATOM 95 OG1 THR B 12 65.074 34.204 44.885 1.00 0.58 \ ATOM 96 CG2 THR B 12 64.096 36.320 45.323 1.00 0.58 \ ATOM 97 N VAL B 13 64.430 33.430 47.983 1.00 -1.60 \ ATOM 98 CA VAL B 13 64.907 33.406 49.372 1.00 -1.60 \ ATOM 99 C VAL B 13 65.505 34.747 49.795 1.00 -1.60 \ ATOM 100 O VAL B 13 66.417 35.263 49.150 1.00 -1.60 \ ATOM 101 CB VAL B 13 65.958 32.290 49.637 1.00 -1.60 \ ATOM 102 CG1 VAL B 13 66.523 32.405 51.065 1.00 -1.60 \ ATOM 103 CG2 VAL B 13 65.364 30.900 49.431 1.00 -1.60 \ ATOM 104 N GLY B 14 64.980 35.311 50.881 1.00 -1.60 \ ATOM 105 CA GLY B 14 65.507 36.536 51.464 1.00 -1.60 \ ATOM 106 C GLY B 14 65.399 37.774 50.587 1.00 -1.60 \ ATOM 107 O GLY B 14 66.031 38.791 50.867 1.00 -1.60 \ ATOM 108 N ASN B 15 64.577 37.705 49.541 1.00 0.58 \ ATOM 109 CA ASN B 15 64.595 38.673 48.443 1.00 0.58 \ ATOM 110 C ASN B 15 66.011 38.901 47.889 1.00 0.58 \ ATOM 111 O ASN B 15 66.380 40.022 47.506 1.00 0.58 \ ATOM 112 CB ASN B 15 63.911 39.996 48.816 1.00 0.58 \ ATOM 113 CG ASN B 15 63.389 40.725 47.594 1.00 0.58 \ ATOM 114 OD1 ASN B 15 63.237 40.126 46.523 1.00 0.58 \ ATOM 115 ND2 ASN B 15 63.147 42.028 47.734 1.00 0.58 \ ATOM 116 N LYS B 16 66.786 37.821 47.829 1.00 -1.60 \ ATOM 117 CA LYS B 16 68.160 37.829 47.332 1.00 -1.60 \ ATOM 118 C LYS B 16 68.370 36.758 46.250 1.00 -1.60 \ ATOM 119 O LYS B 16 68.893 37.058 45.175 1.00 -1.60 \ ATOM 120 CB LYS B 16 69.157 37.628 48.488 1.00 -1.60 \ ATOM 121 CG LYS B 16 69.286 38.813 49.435 1.00 -1.60 \ ATOM 122 CD LYS B 16 70.059 38.439 50.704 1.00 -1.60 \ ATOM 123 CE LYS B 16 70.133 39.609 51.682 1.00 -1.60 \ ATOM 124 NZ LYS B 16 70.778 39.245 52.979 1.00 -1.60 \ ATOM 125 N GLY B 17 67.964 35.518 46.510 1.00 0.58 \ ATOM 126 CA GLY B 17 68.130 34.447 45.541 1.00 0.58 \ ATOM 127 C GLY B 17 68.052 33.070 46.164 1.00 0.58 \ ATOM 128 O GLY B 17 68.475 32.861 47.306 1.00 0.58 \ ATOM 129 N CYS B 18 67.506 32.127 45.404 1.00 -1.00 \ ATOM 130 CA CYS B 18 67.469 30.714 45.773 1.00 -1.00 \ ATOM 131 C CYS B 18 68.773 30.066 45.311 1.00 -1.00 \ ATOM 132 O CYS B 18 69.076 30.055 44.118 1.00 -1.00 \ ATOM 133 CB CYS B 18 66.264 30.032 45.121 1.00 -1.00 \ ATOM 134 SG CYS B 18 64.649 30.690 45.667 1.00 -1.00 \ ATOM 135 N THR B 19 69.558 29.554 46.262 1.00 -1.00 \ ATOM 136 CA THR B 19 70.927 29.071 46.009 1.00 -1.00 \ ATOM 137 C THR B 19 71.131 27.567 46.193 1.00 -1.00 \ ATOM 138 O THR B 19 72.156 27.031 45.753 1.00 -1.00 \ ATOM 139 CB THR B 19 71.956 29.803 46.916 1.00 -1.00 \ ATOM 140 OG1 THR B 19 71.627 29.598 48.299 1.00 -1.00 \ ATOM 141 CG2 THR B 19 71.915 31.305 46.705 1.00 -1.00 \ ATOM 142 N GLN B 20 70.192 26.894 46.856 1.00 -1.00 \ ATOM 143 CA GLN B 20 70.286 25.456 47.103 1.00 -1.00 \ ATOM 144 C GLN B 20 69.051 24.724 46.591 1.00 -1.00 \ ATOM 145 O GLN B 20 69.184 23.798 45.797 1.00 -1.00 \ ATOM 146 CB GLN B 20 70.527 25.168 48.592 1.00 -1.00 \ ATOM 147 CG GLN B 20 70.727 23.686 48.916 1.00 -1.00 \ ATOM 148 CD GLN B 20 71.878 23.060 48.148 1.00 -1.00 \ ATOM 149 OE1 GLN B 20 73.009 23.533 48.229 1.00 -1.00 \ ATOM 150 NE2 GLN B 20 71.589 22.004 47.392 1.00 -1.00 \ ATOM 151 N VAL B 21 67.875 25.117 47.074 1.00 -1.00 \ ATOM 152 CA VAL B 21 66.585 24.642 46.565 1.00 -1.00 \ ATOM 153 C VAL B 21 65.646 25.842 46.451 1.00 -1.00 \ ATOM 154 O VAL B 21 65.729 26.784 47.243 1.00 -1.00 \ ATOM 155 CB VAL B 21 65.888 23.559 47.485 1.00 -1.00 \ ATOM 156 CG1 VAL B 21 65.501 22.328 46.665 0.33 -1.00 \ ATOM 157 CG2 VAL B 21 66.703 23.203 48.741 0.33 -1.00 \ ATOM 158 N GLY B 22 64.751 25.806 45.473 1.00 -1.00 \ ATOM 159 CA GLY B 22 63.797 26.880 45.282 1.00 -1.00 \ ATOM 160 C GLY B 22 62.686 26.848 46.317 1.00 -1.00 \ ATOM 161 O GLY B 22 62.222 25.771 46.725 1.00 -1.00 \ ATOM 162 N VAL B 23 62.222 28.031 46.715 1.00 -1.00 \ ATOM 163 CA VAL B 23 61.022 28.156 47.545 1.00 -1.00 \ ATOM 164 C VAL B 23 59.810 27.499 46.855 1.00 -1.00 \ ATOM 165 O VAL B 23 58.919 26.961 47.517 1.00 -1.00 \ ATOM 166 CB VAL B 23 60.744 29.639 47.890 1.00 -1.00 \ ATOM 167 CG1 VAL B 23 59.424 29.802 48.637 1.00 -1.00 \ ATOM 168 CG2 VAL B 23 61.910 30.205 48.695 1.00 -1.00 \ ATOM 169 N CYS B 24 59.802 27.520 45.526 1.00 -1.00 \ ATOM 170 CA CYS B 24 58.741 26.911 44.719 1.00 -1.00 \ ATOM 171 C CYS B 24 58.830 25.387 44.662 1.00 -1.00 \ ATOM 172 O CYS B 24 57.897 24.724 44.200 1.00 -1.00 \ ATOM 173 CB CYS B 24 58.797 27.459 43.293 1.00 -1.00 \ ATOM 174 SG CYS B 24 60.357 27.093 42.426 1.00 -1.00 \ ATOM 175 N GLY B 25 59.951 24.830 45.114 1.00 -1.00 \ ATOM 176 CA GLY B 25 60.188 23.397 45.058 1.00 -1.00 \ ATOM 177 C GLY B 25 61.162 22.978 43.960 1.00 -1.00 \ ATOM 178 O GLY B 25 61.497 21.790 43.855 1.00 -1.00 \ """, "e1oa0B3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1oa0B3_csv", state=0, origin=1) cmd.zoom("e1oa0B3_csv", animate=-1)