cmd.read_pdbstr("""\ ATOM 1 N SER X 19 -10.213 23.666 66.111 1.00 -1.00 \ ATOM 2 CA SER X 19 -9.938 22.233 65.803 1.00 -1.00 \ ATOM 3 C SER X 19 -9.646 22.047 64.316 1.00 -1.00 \ ATOM 4 O SER X 19 -10.052 22.863 63.488 1.00 -1.00 \ ATOM 5 CB SER X 19 -11.126 21.362 66.215 0.01 -1.00 \ ATOM 6 OG SER X 19 -12.327 21.817 65.613 0.01 -1.00 \ ATOM 7 N TRP X 20 -8.934 20.973 63.984 1.00 0.35 \ ATOM 8 CA TRP X 20 -8.629 20.663 62.591 1.00 0.35 \ ATOM 9 C TRP X 20 -9.903 20.364 61.801 1.00 0.35 \ ATOM 10 O TRP X 20 -10.871 19.834 62.337 1.00 0.35 \ ATOM 11 CB TRP X 20 -7.741 19.420 62.478 1.00 0.35 \ ATOM 12 CG TRP X 20 -6.386 19.474 63.129 1.00 0.35 \ ATOM 13 CD1 TRP X 20 -5.892 18.592 64.053 1.00 0.35 \ ATOM 14 CD2 TRP X 20 -5.332 20.406 62.868 1.00 0.35 \ ATOM 15 NE1 TRP X 20 -4.611 18.939 64.402 1.00 0.35 \ ATOM 16 CE2 TRP X 20 -4.244 20.052 63.696 1.00 0.35 \ ATOM 17 CE3 TRP X 20 -5.208 21.535 62.050 1.00 0.35 \ ATOM 18 CZ2 TRP X 20 -3.046 20.767 63.711 1.00 0.35 \ ATOM 19 CZ3 TRP X 20 -4.007 22.244 62.065 1.00 0.35 \ ATOM 20 CH2 TRP X 20 -2.947 21.855 62.893 1.00 0.35 \ ATOM 21 N LYS X 21 -9.888 20.695 60.514 1.00 0.00 \ ATOM 22 CA LYS X 21 -10.903 20.207 59.585 1.00 0.00 \ ATOM 23 C LYS X 21 -10.661 18.735 59.283 1.00 0.00 \ ATOM 24 O LYS X 21 -9.542 18.234 59.383 1.00 0.00 \ ATOM 25 CB LYS X 21 -10.896 21.006 58.278 1.00 0.00 \ ATOM 26 CG LYS X 21 -11.109 22.504 58.449 1.00 0.00 \ ATOM 27 CD LYS X 21 -12.372 22.813 59.242 1.00 0.00 \ ATOM 28 CE LYS X 21 -12.697 24.286 59.233 1.00 0.00 \ ATOM 29 NZ LYS X 21 -13.932 24.566 60.019 1.00 0.00 \ ATOM 30 N ARG X 22 -11.729 18.037 58.938 1.00 -0.68 \ ATOM 31 CA ARG X 22 -11.654 16.644 58.550 1.00 -0.68 \ ATOM 32 C ARG X 22 -11.679 16.562 57.040 1.00 -0.68 \ ATOM 33 O ARG X 22 -12.357 17.340 56.376 1.00 -0.68 \ ATOM 34 CB ARG X 22 -12.799 15.849 59.176 1.00 -0.68 \ ATOM 35 CG ARG X 22 -12.759 15.885 60.703 1.00 -0.68 \ ATOM 36 CD ARG X 22 -13.280 14.640 61.387 1.00 -0.68 \ ATOM 37 NE ARG X 22 -12.743 14.495 62.744 1.00 -0.68 \ ATOM 38 CZ ARG X 22 -11.895 13.545 63.142 1.00 -0.68 \ ATOM 39 NH1 ARG X 22 -11.441 12.621 62.295 1.00 -0.68 \ ATOM 40 NH2 ARG X 22 -11.491 13.522 64.410 1.00 -0.68 \ ATOM 41 N CYS X 23 -10.950 15.586 56.524 1.00 1.83 \ ATOM 42 CA CYS X 23 -10.825 15.327 55.097 1.00 1.83 \ ATOM 43 C CYS X 23 -12.001 14.489 54.603 1.00 1.83 \ ATOM 44 O CYS X 23 -12.323 13.439 55.183 1.00 1.83 \ ATOM 45 CB CYS X 23 -9.526 14.572 54.870 1.00 1.83 \ ATOM 46 SG CYS X 23 -9.246 14.083 53.164 1.00 1.83 \ ATOM 47 N ALA X 24 -12.644 14.937 53.543 1.00 -1.14 \ ATOM 48 CA ALA X 24 -13.737 14.181 52.937 1.00 -1.14 \ ATOM 49 C ALA X 24 -13.283 12.900 52.246 1.00 -1.14 \ ATOM 50 O ALA X 24 -14.081 12.031 51.977 1.00 -1.14 \ ATOM 51 CB ALA X 24 -14.501 15.055 51.972 1.00 -1.14 \ ATOM 52 N GLY X 25 -12.000 12.805 51.941 1.00 -0.61 \ ATOM 53 CA GLY X 25 -11.459 11.632 51.285 1.00 -0.61 \ ATOM 54 C GLY X 25 -11.133 10.477 52.218 1.00 -0.61 \ ATOM 55 O GLY X 25 -11.404 9.316 51.889 1.00 -0.61 \ ATOM 56 N CYS X 26 -10.569 10.785 53.382 1.00 1.83 \ ATOM 57 CA CYS X 26 -10.120 9.746 54.316 1.00 1.83 \ ATOM 58 C CYS X 26 -10.758 9.817 55.699 1.00 1.83 \ ATOM 59 O CYS X 26 -10.570 8.907 56.491 1.00 1.83 \ ATOM 60 CB CYS X 26 -8.595 9.751 54.465 1.00 1.83 \ ATOM 61 SG CYS X 26 -7.970 11.197 55.358 1.00 1.83 \ ATOM 62 N GLY X 27 -11.489 10.887 55.993 1.00 -1.06 \ ATOM 63 CA GLY X 27 -12.099 11.072 57.308 1.00 -1.06 \ ATOM 64 C GLY X 27 -11.169 11.563 58.403 1.00 -1.06 \ ATOM 65 O GLY X 27 -11.628 11.822 59.508 1.00 -1.06 \ ATOM 66 N GLY X 28 -9.877 11.675 58.115 1.00 -0.67 \ ATOM 67 CA GLY X 28 -8.895 12.041 59.122 1.00 -0.67 \ ATOM 68 C GLY X 28 -8.776 13.544 59.278 1.00 -0.67 \ ATOM 69 O GLY X 28 -9.107 14.304 58.373 1.00 -0.67 \ ATOM 70 N LYS X 29 -8.298 13.975 60.429 1.00 -0.37 \ ATOM 71 CA LYS X 29 -8.009 15.380 60.646 1.00 -0.37 \ ATOM 72 C LYS X 29 -6.892 15.823 59.712 1.00 -0.37 \ ATOM 73 O LYS X 29 -5.960 15.063 59.422 1.00 -0.37 \ ATOM 74 CB LYS X 29 -7.649 15.643 62.113 1.00 -0.37 \ ATOM 75 CG LYS X 29 -8.826 15.400 63.059 1.00 -0.37 \ ATOM 76 CD LYS X 29 -8.677 16.079 64.420 1.00 -0.37 \ ATOM 77 CE LYS X 29 -7.892 15.229 65.398 1.00 -0.37 \ ATOM 78 NZ LYS X 29 -6.455 15.116 65.022 1.00 -0.37 \ ATOM 79 N ILE X 30 -6.978 17.065 59.248 1.00 1.50 \ ATOM 80 CA ILE X 30 -5.985 17.611 58.340 1.00 1.50 \ ATOM 81 C ILE X 30 -5.078 18.538 59.132 1.00 1.50 \ ATOM 82 O ILE X 30 -5.428 19.679 59.441 1.00 1.50 \ ATOM 83 CB ILE X 30 -6.627 18.355 57.156 1.00 1.50 \ ATOM 84 CG1 ILE X 30 -7.576 17.451 56.361 1.00 1.50 \ ATOM 85 CG2 ILE X 30 -5.536 18.873 56.229 1.00 1.50 \ ATOM 86 CD1 ILE X 30 -8.527 18.233 55.492 1.00 1.50 \ ATOM 87 N ALA X 31 -3.891 18.023 59.439 1.00 -0.64 \ ATOM 88 CA ALA X 31 -2.864 18.777 60.137 1.00 -0.64 \ ATOM 89 C ALA X 31 -1.829 19.374 59.193 1.00 -0.64 \ ATOM 90 O ALA X 31 -0.922 20.058 59.624 1.00 -0.64 \ ATOM 91 CB ALA X 31 -2.181 17.882 61.165 1.00 -0.64 \ ATOM 92 N ASP X 32 -1.978 19.112 57.908 1.00 -0.95 \ ATOM 93 CA ASP X 32 -1.035 19.563 56.893 1.00 -0.95 \ ATOM 94 C ASP X 32 -1.024 21.078 56.805 1.00 -0.95 \ ATOM 95 O ASP X 32 -2.054 21.725 56.944 1.00 -0.95 \ ATOM 96 CB ASP X 32 -1.431 19.049 55.514 1.00 -0.95 \ ATOM 97 CG ASP X 32 -1.380 17.557 55.379 1.00 -0.95 \ ATOM 98 OD1 ASP X 32 -1.092 16.802 56.341 1.00 -0.95 \ ATOM 99 OD2 ASP X 32 -1.664 17.063 54.272 1.00 -0.95 \ ATOM 100 N ARG X 33 0.145 21.629 56.499 1.00 -0.77 \ ATOM 101 CA ARG X 33 0.275 23.060 56.296 1.00 -0.77 \ ATOM 102 C ARG X 33 -0.546 23.557 55.120 1.00 -0.77 \ ATOM 103 O ARG X 33 -1.074 24.660 55.172 1.00 -0.77 \ ATOM 104 CB ARG X 33 1.732 23.468 56.105 1.00 -0.77 \ ATOM 105 CG ARG X 33 1.912 24.977 55.937 1.00 -0.77 \ ATOM 106 CD ARG X 33 3.223 25.523 56.400 1.00 -0.77 \ ATOM 107 NE ARG X 33 3.206 26.983 56.346 1.00 -0.77 \ ATOM 108 CZ ARG X 33 3.987 27.785 57.069 1.00 -0.77 \ ATOM 109 NH1 ARG X 33 4.884 27.290 57.915 1.00 -0.77 \ ATOM 110 NH2 ARG X 33 3.878 29.100 56.935 1.00 -0.77 \ ATOM 111 N PHE X 34 -0.624 22.751 54.060 1.00 -0.51 \ ATOM 112 CA PHE X 34 -1.359 23.104 52.863 1.00 -0.51 \ ATOM 113 C PHE X 34 -2.406 22.035 52.619 1.00 -0.51 \ ATOM 114 O PHE X 34 -2.157 20.866 52.816 1.00 -0.51 \ ATOM 115 CB PHE X 34 -0.426 23.235 51.668 1.00 -0.51 \ ATOM 116 CG PHE X 34 0.650 24.277 51.868 1.00 -0.51 \ ATOM 117 CD1 PHE X 34 0.359 25.631 51.715 1.00 -0.51 \ ATOM 118 CD2 PHE X 34 1.930 23.915 52.246 1.00 -0.51 \ ATOM 119 CE1 PHE X 34 1.330 26.579 51.906 1.00 -0.51 \ ATOM 120 CE2 PHE X 34 2.904 24.859 52.446 1.00 -0.51 \ ATOM 121 CZ PHE X 34 2.608 26.195 52.288 1.00 -0.51 \ ATOM 122 N LEU X 35 -3.581 22.474 52.191 1.00 -0.88 \ ATOM 123 CA LEU X 35 -4.716 21.595 51.999 1.00 -0.88 \ ATOM 124 C LEU X 35 -5.602 22.131 50.898 1.00 -0.88 \ ATOM 125 O LEU X 35 -5.325 23.190 50.334 1.00 -0.88 \ ATOM 126 CB LEU X 35 -5.469 21.397 53.321 1.00 -0.88 \ ATOM 127 CG LEU X 35 -6.176 22.601 53.949 1.00 -0.88 \ ATOM 128 CD1 LEU X 35 -7.234 22.141 54.912 1.00 -0.88 \ ATOM 129 CD2 LEU X 35 -5.221 23.536 54.653 1.00 -0.88 \ ATOM 130 N LEU X 36 -6.679 21.419 50.592 1.00 0.61 \ ATOM 131 CA LEU X 36 -7.594 21.827 49.539 1.00 0.61 \ ATOM 132 C LEU X 36 -9.006 22.012 50.037 1.00 0.61 \ ATOM 133 O LEU X 36 -9.432 21.366 50.992 1.00 0.61 \ ATOM 134 CB LEU X 36 -7.620 20.789 48.425 1.00 0.61 \ ATOM 135 CG LEU X 36 -6.289 20.360 47.835 1.00 0.61 \ ATOM 136 CD1 LEU X 36 -6.521 19.299 46.797 1.00 0.61 \ ATOM 137 CD2 LEU X 36 -5.550 21.548 47.204 1.00 0.61 \ ATOM 138 N TYR X 37 -9.724 22.899 49.364 1.00 -0.81 \ ATOM 139 CA TYR X 37 -11.152 23.033 49.536 1.00 -0.81 \ ATOM 140 C TYR X 37 -11.786 22.834 48.174 1.00 -0.81 \ ATOM 141 O TYR X 37 -11.398 23.472 47.198 1.00 -0.81 \ ATOM 142 CB TYR X 37 -11.488 24.402 50.086 1.00 -0.81 \ ATOM 143 CG TYR X 37 -12.918 24.620 50.486 1.00 -0.81 \ ATOM 144 CD1 TYR X 37 -13.397 24.160 51.708 1.00 -0.81 \ ATOM 145 CD2 TYR X 37 -13.783 25.318 49.664 1.00 -0.81 \ ATOM 146 CE1 TYR X 37 -14.680 24.404 52.107 1.00 -0.81 \ ATOM 147 CE2 TYR X 37 -15.086 25.560 50.058 1.00 -0.81 \ ATOM 148 CZ TYR X 37 -15.530 25.102 51.279 1.00 -0.81 \ ATOM 149 OH TYR X 37 -16.818 25.394 51.672 1.00 -0.81 \ ATOM 150 N ALA X 38 -12.766 21.948 48.119 1.00 0.41 \ ATOM 151 CA ALA X 38 -13.443 21.629 46.869 1.00 0.41 \ ATOM 152 C ALA X 38 -14.739 20.914 47.217 1.00 0.41 \ ATOM 153 O ALA X 38 -14.781 20.109 48.153 1.00 0.41 \ ATOM 154 CB ALA X 38 -12.591 20.729 46.005 1.00 0.41 \ ATOM 155 N MET X 39 -15.795 21.169 46.450 1.00 -0.37 \ ATOM 156 CA MET X 39 -17.088 20.523 46.664 1.00 -0.37 \ ATOM 157 C MET X 39 -17.565 20.693 48.108 1.00 -0.37 \ ATOM 158 O MET X 39 -18.124 19.787 48.699 1.00 -0.37 \ ATOM 159 CB MET X 39 -17.050 19.055 46.236 1.00 -0.37 \ ATOM 160 CG MET X 39 -16.826 18.918 44.730 1.00 -0.37 \ ATOM 161 SD MET X 39 -16.141 17.350 44.234 1.00 -0.37 \ ATOM 162 CE MET X 39 -14.484 17.579 44.755 1.00 -0.37 \ ATOM 163 N ASP X 40 -17.222 21.890 48.583 0.75 -0.01 \ ATOM 164 CA ASP X 40 -17.459 22.421 49.908 0.75 -0.01 \ ATOM 165 C ASP X 40 -17.109 21.447 51.044 0.75 -0.01 \ ATOM 166 O ASP X 40 -17.773 21.351 52.075 0.75 -0.01 \ ATOM 167 CB ASP X 40 -18.845 23.064 49.954 0.75 -0.01 \ ATOM 168 CG ASP X 40 -18.912 24.360 49.143 0.75 -0.01 \ ATOM 169 OD1 ASP X 40 -19.400 24.351 47.996 0.75 -0.01 \ ATOM 170 OD2 ASP X 40 -18.460 25.440 49.565 0.75 -0.01 \ ATOM 171 N SER X 41 -15.998 20.755 50.800 1.00 -0.72 \ ATOM 172 CA SER X 41 -15.276 19.907 51.754 1.00 -0.72 \ ATOM 173 C SER X 41 -13.796 20.308 51.756 1.00 -0.72 \ ATOM 174 O SER X 41 -13.263 20.884 50.794 1.00 -0.72 \ ATOM 175 CB SER X 41 -15.369 18.430 51.368 1.00 -0.72 \ ATOM 176 OG SER X 41 -16.635 17.883 51.646 1.00 -0.72 \ ATOM 177 N TYR X 42 -13.136 19.976 52.852 1.00 -0.81 \ ATOM 178 CA TYR X 42 -11.690 20.058 52.979 1.00 -0.81 \ ATOM 179 C TYR X 42 -11.075 18.719 52.649 1.00 -0.81 \ ATOM 180 O TYR X 42 -11.682 17.677 52.888 1.00 -0.81 \ ATOM 181 CB TYR X 42 -11.297 20.461 54.395 1.00 -0.81 \ ATOM 182 CG TYR X 42 -11.801 21.825 54.773 1.00 -0.81 \ ATOM 183 CD1 TYR X 42 -13.047 21.989 55.353 1.00 -0.81 \ ATOM 184 CD2 TYR X 42 -11.045 22.958 54.532 1.00 -0.81 \ ATOM 185 CE1 TYR X 42 -13.516 23.236 55.686 1.00 -0.81 \ ATOM 186 CE2 TYR X 42 -11.493 24.210 54.891 1.00 -0.81 \ ATOM 187 CZ TYR X 42 -12.734 24.343 55.473 1.00 -0.81 \ ATOM 188 OH TYR X 42 -13.193 25.587 55.831 1.00 -0.81 \ ATOM 189 N TRP X 43 -9.836 18.753 52.165 1.00 1.49 \ ATOM 190 CA TRP X 43 -9.136 17.554 51.735 1.00 1.49 \ ATOM 191 C TRP X 43 -7.657 17.660 52.026 1.00 1.49 \ ATOM 192 O TRP X 43 -7.069 18.703 51.781 1.00 1.49 \ ATOM 193 CB TRP X 43 -9.262 17.362 50.223 1.00 1.49 \ ATOM 194 CG TRP X 43 -10.640 17.426 49.675 1.00 1.49 \ ATOM 195 CD1 TRP X 43 -11.373 18.549 49.463 1.00 1.49 \ ATOM 196 CD2 TRP X 43 -11.456 16.328 49.263 1.00 1.49 \ ATOM 197 NE1 TRP X 43 -12.605 18.224 48.949 1.00 1.49 \ ATOM 198 CE2 TRP X 43 -12.674 16.863 48.801 1.00 1.49 \ ATOM 199 CE3 TRP X 43 -11.271 14.939 49.202 1.00 1.49 \ ATOM 200 CZ2 TRP X 43 -13.715 16.059 48.309 1.00 1.49 \ ATOM 201 CZ3 TRP X 43 -12.302 14.147 48.708 1.00 1.49 \ ATOM 202 CH2 TRP X 43 -13.511 14.713 48.277 1.00 1.49 \ ATOM 203 N HIS X 44 -7.028 16.583 52.480 1.00 1.83 \ ATOM 204 CA HIS X 44 -5.601 16.428 52.224 1.00 1.83 \ ATOM 205 C HIS X 44 -5.465 16.402 50.701 1.00 1.83 \ ATOM 206 O HIS X 44 -6.262 15.750 50.020 1.00 1.83 \ ATOM 207 CB HIS X 44 -5.062 15.087 52.705 1.00 1.83 \ ATOM 208 CG HIS X 44 -5.162 14.822 54.178 1.00 1.83 \ ATOM 209 ND1 HIS X 44 -6.095 13.957 54.723 1.00 1.83 \ ATOM 210 CD2 HIS X 44 -4.399 15.253 55.209 1.00 1.83 \ ATOM 211 CE1 HIS X 44 -5.913 13.898 56.031 1.00 1.83 \ ATOM 212 NE2 HIS X 44 -4.887 14.673 56.349 1.00 1.83 \ ATOM 213 N SER X 45 -4.453 17.047 50.133 1.00 -0.75 \ ATOM 214 CA SER X 45 -4.345 17.032 48.676 1.00 -0.75 \ ATOM 215 C SER X 45 -4.283 15.599 48.122 1.00 -0.75 \ ATOM 216 O SER X 45 -4.929 15.272 47.124 1.00 -0.75 \ ATOM 217 CB SER X 45 -3.144 17.840 48.192 1.00 -0.75 \ ATOM 218 OG SER X 45 -3.126 17.842 46.777 1.00 -0.75 \ ATOM 219 N ARG X 46 -3.519 14.739 48.782 1.00 -0.78 \ ATOM 220 CA ARG X 46 -3.386 13.346 48.343 1.00 -0.78 \ ATOM 221 C ARG X 46 -4.699 12.589 48.315 1.00 -0.78 \ ATOM 222 O ARG X 46 -4.786 11.562 47.663 1.00 -0.78 \ ATOM 223 CB ARG X 46 -2.387 12.587 49.234 1.00 -0.78 \ ATOM 224 CG ARG X 46 -2.770 12.580 50.714 1.00 -0.78 \ ATOM 225 CD ARG X 46 -1.709 11.994 51.631 1.00 -0.78 \ ATOM 226 NE ARG X 46 -2.006 12.298 53.037 1.00 -0.78 \ ATOM 227 CZ ARG X 46 -2.844 11.608 53.807 1.00 -0.78 \ ATOM 228 NH1 ARG X 46 -3.431 10.495 53.366 1.00 -0.78 \ ATOM 229 NH2 ARG X 46 -3.042 12.013 55.051 1.00 -0.78 \ ATOM 230 N CYS X 47 -5.701 13.085 49.033 1.00 1.32 \ ATOM 231 CA CYS X 47 -6.998 12.418 49.136 1.00 1.32 \ ATOM 232 C CYS X 47 -8.020 12.857 48.100 1.00 1.32 \ ATOM 233 O CYS X 47 -9.071 12.252 48.009 1.00 1.32 \ ATOM 234 CB CYS X 47 -7.548 12.619 50.527 1.00 1.32 \ ATOM 235 SG CYS X 47 -6.540 11.788 51.785 1.00 1.32 \ ATOM 236 N LEU X 48 -7.728 13.926 47.351 1.00 1.48 \ ATOM 237 CA LEU X 48 -8.628 14.403 46.298 1.00 1.48 \ ATOM 238 C LEU X 48 -8.063 13.946 44.963 1.00 1.48 \ ATOM 239 O LEU X 48 -7.146 14.546 44.411 1.00 1.48 \ ATOM 240 CB LEU X 48 -8.811 15.915 46.358 1.00 1.48 \ ATOM 241 CG LEU X 48 -9.754 16.478 45.290 1.00 1.48 \ ATOM 242 CD1 LEU X 48 -11.130 15.851 45.354 1.00 1.48 \ ATOM 243 CD2 LEU X 48 -9.836 17.990 45.424 1.00 1.48 \ """, "e1rutX1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1rutX1_csv", state=0, origin=1) cmd.zoom("e1rutX1_csv", animate=-1)