cmd.read_pdbstr("""\ ATOM 1 N MET F 1 78.901 -15.192 60.409 1.00 -1.00 \ ATOM 2 CA MET F 1 77.835 -14.625 61.291 1.00 -1.00 \ ATOM 3 C MET F 1 77.962 -13.099 61.445 1.00 -1.00 \ ATOM 4 O MET F 1 77.281 -12.489 62.270 1.00 -1.00 \ ATOM 5 CB MET F 1 77.881 -15.304 62.673 1.00 -1.00 \ ATOM 6 CG MET F 1 77.788 -16.835 62.636 1.00 -1.00 \ ATOM 7 SD MET F 1 76.424 -17.434 61.610 1.00 -1.00 \ ATOM 8 CE MET F 1 75.091 -17.539 62.800 1.00 -1.00 \ ATOM 9 N THR F 2 78.832 -12.490 60.638 1.00 -1.00 \ ATOM 10 CA THR F 2 79.057 -11.042 60.669 1.00 -1.00 \ ATOM 11 C THR F 2 77.798 -10.280 60.236 1.00 -1.00 \ ATOM 12 O THR F 2 77.417 -9.295 60.868 1.00 -1.00 \ ATOM 13 CB THR F 2 80.276 -10.625 59.750 1.00 -1.00 \ ATOM 14 OG1 THR F 2 80.509 -9.212 59.849 1.00 -1.00 \ ATOM 15 CG2 THR F 2 80.016 -10.986 58.290 1.00 -1.00 \ ATOM 16 N GLU F 3 77.142 -10.762 59.181 1.00 0.04 \ ATOM 17 CA GLU F 3 75.934 -10.126 58.639 1.00 0.04 \ ATOM 18 C GLU F 3 74.805 -9.858 59.654 1.00 0.04 \ ATOM 19 O GLU F 3 73.809 -9.202 59.328 1.00 0.04 \ ATOM 20 CB GLU F 3 75.405 -10.949 57.441 1.00 0.04 \ ATOM 21 CG GLU F 3 76.289 -10.862 56.166 1.00 0.04 \ ATOM 22 CD GLU F 3 75.760 -11.679 54.976 1.00 0.04 \ ATOM 23 OE1 GLU F 3 75.793 -12.927 55.035 1.00 0.04 \ ATOM 24 OE2 GLU F 3 75.311 -11.072 53.976 1.00 0.04 \ ATOM 25 N GLU F 4 74.967 -10.349 60.880 1.00 -0.07 \ ATOM 26 CA GLU F 4 73.971 -10.146 61.936 1.00 -0.07 \ ATOM 27 C GLU F 4 74.202 -8.817 62.646 1.00 -0.07 \ ATOM 28 O GLU F 4 73.292 -8.229 63.233 1.00 -0.07 \ ATOM 29 CB GLU F 4 74.054 -11.273 62.962 1.00 -0.07 \ ATOM 30 CG GLU F 4 73.718 -12.644 62.416 1.00 -0.07 \ ATOM 31 CD GLU F 4 73.928 -13.733 63.448 1.00 -0.07 \ ATOM 32 OE1 GLU F 4 73.514 -13.533 64.611 1.00 -0.07 \ ATOM 33 OE2 GLU F 4 74.499 -14.788 63.098 1.00 -0.07 \ ATOM 34 N MET F 5 75.448 -8.369 62.612 1.00 -0.08 \ ATOM 35 CA MET F 5 75.820 -7.109 63.226 1.00 -0.08 \ ATOM 36 C MET F 5 75.912 -6.071 62.101 1.00 -0.08 \ ATOM 37 O MET F 5 75.593 -4.904 62.289 1.00 -0.08 \ ATOM 38 CB MET F 5 77.176 -7.238 63.928 1.00 -0.08 \ ATOM 39 CG MET F 5 78.368 -7.128 62.986 1.00 -0.08 \ ATOM 40 SD MET F 5 79.948 -6.901 63.818 1.00 -0.08 \ ATOM 41 CE MET F 5 80.306 -8.635 64.302 1.00 -0.08 \ ATOM 42 N LEU F 6 76.340 -6.515 60.922 1.00 -1.27 \ ATOM 43 CA LEU F 6 76.473 -5.626 59.779 1.00 -1.27 \ ATOM 44 C LEU F 6 75.176 -4.878 59.554 1.00 -1.27 \ ATOM 45 O LEU F 6 75.189 -3.703 59.201 1.00 -1.27 \ ATOM 46 CB LEU F 6 76.856 -6.410 58.517 1.00 -1.27 \ ATOM 47 CG LEU F 6 78.204 -7.148 58.559 1.00 -1.27 \ ATOM 48 CD1 LEU F 6 78.374 -7.944 57.274 1.00 -1.27 \ ATOM 49 CD2 LEU F 6 79.367 -6.163 58.747 1.00 -1.27 \ ATOM 50 N TYR F 7 74.049 -5.554 59.750 1.00 -1.25 \ ATOM 51 CA TYR F 7 72.776 -4.878 59.572 1.00 -1.25 \ ATOM 52 C TYR F 7 72.446 -4.221 60.919 1.00 -1.25 \ ATOM 53 O TYR F 7 71.833 -3.155 60.976 1.00 -1.25 \ ATOM 54 CB TYR F 7 71.681 -5.869 59.081 1.00 -1.25 \ ATOM 55 CG TYR F 7 70.889 -6.645 60.127 1.00 -1.25 \ ATOM 56 CD1 TYR F 7 70.161 -5.980 61.121 1.00 -1.25 \ ATOM 57 CD2 TYR F 7 70.821 -8.041 60.093 1.00 -1.25 \ ATOM 58 CE1 TYR F 7 69.377 -6.681 62.072 1.00 -1.25 \ ATOM 59 CE2 TYR F 7 70.035 -8.761 61.035 1.00 -1.25 \ ATOM 60 CZ TYR F 7 69.314 -8.069 62.028 1.00 -1.25 \ ATOM 61 OH TYR F 7 68.546 -8.740 62.978 1.00 -1.25 \ ATOM 62 N ALA F 8 72.911 -4.846 61.998 1.00 -0.07 \ ATOM 63 CA ALA F 8 72.679 -4.353 63.355 1.00 -0.07 \ ATOM 64 C ALA F 8 73.330 -2.993 63.555 1.00 -0.07 \ ATOM 65 O ALA F 8 72.839 -2.165 64.318 1.00 -0.07 \ ATOM 66 CB ALA F 8 73.230 -5.353 64.375 1.00 -0.07 \ ATOM 67 N ALA F 9 74.439 -2.773 62.857 1.00 0.04 \ ATOM 68 CA ALA F 9 75.175 -1.519 62.948 1.00 0.04 \ ATOM 69 C ALA F 9 74.548 -0.444 62.078 1.00 0.04 \ ATOM 70 O ALA F 9 74.312 0.664 62.532 1.00 0.04 \ ATOM 71 CB ALA F 9 76.620 -1.731 62.538 1.00 0.04 \ ATOM 72 N LEU F 10 74.280 -0.765 60.822 1.00 -1.19 \ ATOM 73 CA LEU F 10 73.679 0.214 59.937 1.00 -1.19 \ ATOM 74 C LEU F 10 72.464 0.887 60.585 1.00 -1.19 \ ATOM 75 O LEU F 10 72.238 2.090 60.420 1.00 -1.19 \ ATOM 76 CB LEU F 10 73.254 -0.450 58.635 1.00 -1.19 \ ATOM 77 CG LEU F 10 74.276 -1.383 58.011 1.00 -1.19 \ ATOM 78 CD1 LEU F 10 73.949 -1.475 56.543 1.00 -1.19 \ ATOM 79 CD2 LEU F 10 75.695 -0.878 58.201 1.00 -1.19 \ ATOM 80 N LEU F 11 71.691 0.110 61.333 1.00 -0.07 \ ATOM 81 CA LEU F 11 70.488 0.608 61.991 1.00 -0.07 \ ATOM 82 C LEU F 11 70.682 1.684 63.062 1.00 -0.07 \ ATOM 83 O LEU F 11 69.864 2.602 63.191 1.00 -0.07 \ ATOM 84 CB LEU F 11 69.753 -0.568 62.590 1.00 -0.07 \ ATOM 85 CG LEU F 11 69.115 -1.472 61.547 1.00 -0.07 \ ATOM 86 CD1 LEU F 11 69.196 -2.928 61.977 1.00 -0.07 \ ATOM 87 CD2 LEU F 11 67.671 -1.038 61.354 1.00 -0.07 \ ATOM 88 N SER F 12 71.753 1.550 63.839 1.00 -1.25 \ ATOM 89 CA SER F 12 72.078 2.498 64.900 1.00 -1.25 \ ATOM 90 C SER F 12 72.395 3.863 64.291 1.00 -1.25 \ ATOM 91 O SER F 12 71.875 4.894 64.727 1.00 -1.25 \ ATOM 92 CB SER F 12 73.293 1.995 65.669 1.00 -1.25 \ ATOM 93 OG SER F 12 73.216 0.597 65.863 1.00 -1.25 \ ATOM 94 N PHE F 13 73.259 3.851 63.280 1.00 -0.07 \ ATOM 95 CA PHE F 13 73.673 5.058 62.574 1.00 -0.07 \ ATOM 96 C PHE F 13 72.445 5.768 62.005 1.00 -0.07 \ ATOM 97 O PHE F 13 72.059 6.839 62.469 1.00 -0.07 \ ATOM 98 CB PHE F 13 74.630 4.684 61.429 1.00 -0.07 \ ATOM 99 CG PHE F 13 75.391 5.852 60.855 1.00 -0.07 \ ATOM 100 CD1 PHE F 13 76.601 6.255 61.411 1.00 -0.07 \ ATOM 101 CD2 PHE F 13 74.883 6.564 59.776 1.00 -0.07 \ ATOM 102 CE1 PHE F 13 77.293 7.352 60.903 1.00 -0.07 \ ATOM 103 CE2 PHE F 13 75.566 7.664 59.260 1.00 -0.07 \ ATOM 104 CZ PHE F 13 76.774 8.059 59.826 1.00 -0.07 \ ATOM 105 N GLY F 14 71.826 5.142 61.009 1.00 1.85 \ ATOM 106 CA GLY F 14 70.663 5.716 60.355 1.00 1.85 \ ATOM 107 C GLY F 14 69.582 6.240 61.265 1.00 1.85 \ ATOM 108 O GLY F 14 69.217 7.417 61.204 1.00 1.85 \ ATOM 109 N LEU F 15 69.054 5.359 62.098 1.00 -0.07 \ ATOM 110 CA LEU F 15 68.013 5.746 63.023 1.00 -0.07 \ ATOM 111 C LEU F 15 68.303 7.105 63.649 1.00 -0.07 \ ATOM 112 O LEU F 15 67.386 7.893 63.899 1.00 -0.07 \ ATOM 113 CB LEU F 15 67.858 4.683 64.111 1.00 -0.07 \ ATOM 114 CG LEU F 15 66.806 3.619 63.786 1.00 -0.07 \ ATOM 115 CD1 LEU F 15 65.400 4.244 63.802 1.00 -0.07 \ ATOM 116 CD2 LEU F 15 67.111 3.011 62.426 1.00 -0.07 \ ATOM 117 N ILE F 16 69.577 7.383 63.901 1.00 -0.07 \ ATOM 118 CA ILE F 16 69.960 8.663 64.486 1.00 -0.07 \ ATOM 119 C ILE F 16 69.414 9.821 63.656 1.00 -0.07 \ ATOM 120 O ILE F 16 68.828 10.762 64.183 1.00 -0.07 \ ATOM 121 CB ILE F 16 71.482 8.838 64.529 1.00 -0.07 \ ATOM 122 CG1 ILE F 16 72.121 7.765 65.405 1.00 -0.07 \ ATOM 123 CG2 ILE F 16 71.807 10.217 65.038 1.00 -0.07 \ ATOM 124 CD1 ILE F 16 71.719 7.863 66.860 1.00 -0.07 \ ATOM 125 N PHE F 17 69.617 9.732 62.348 1.00 -0.07 \ ATOM 126 CA PHE F 17 69.198 10.760 61.416 1.00 -0.07 \ ATOM 127 C PHE F 17 67.713 10.796 61.229 1.00 -0.07 \ ATOM 128 O PHE F 17 67.121 11.846 60.959 1.00 -0.07 \ ATOM 129 CB PHE F 17 69.907 10.518 60.111 1.00 -0.07 \ ATOM 130 CG PHE F 17 71.373 10.425 60.279 1.00 -0.07 \ ATOM 131 CD1 PHE F 17 71.934 9.299 60.840 1.00 -0.07 \ ATOM 132 CD2 PHE F 17 72.194 11.498 59.957 1.00 -0.07 \ ATOM 133 CE1 PHE F 17 73.287 9.238 61.081 1.00 -0.07 \ ATOM 134 CE2 PHE F 17 73.553 11.441 60.194 1.00 -0.07 \ ATOM 135 CZ PHE F 17 74.101 10.307 60.759 1.00 -0.07 \ ATOM 136 N VAL F 18 67.112 9.629 61.374 1.00 -1.12 \ ATOM 137 CA VAL F 18 65.680 9.505 61.260 1.00 -1.12 \ ATOM 138 C VAL F 18 65.080 10.237 62.454 1.00 -1.12 \ ATOM 139 O VAL F 18 64.116 10.988 62.317 1.00 -1.12 \ ATOM 140 CB VAL F 18 65.268 8.041 61.306 1.00 -1.12 \ ATOM 141 CG1 VAL F 18 63.781 7.939 61.357 1.00 -1.12 \ ATOM 142 CG2 VAL F 18 65.842 7.309 60.110 1.00 -1.12 \ ATOM 143 N GLY F 19 65.667 10.016 63.627 1.00 1.85 \ ATOM 144 CA GLY F 19 65.177 10.666 64.824 1.00 1.85 \ ATOM 145 C GLY F 19 65.445 12.146 64.715 1.00 1.85 \ ATOM 146 O GLY F 19 64.564 12.974 64.938 1.00 1.85 \ ATOM 147 N TRP F 20 66.686 12.474 64.381 1.00 -0.07 \ ATOM 148 CA TRP F 20 67.105 13.851 64.214 1.00 -0.07 \ ATOM 149 C TRP F 20 66.088 14.509 63.300 1.00 -0.07 \ ATOM 150 O TRP F 20 65.549 15.567 63.621 1.00 -0.07 \ ATOM 151 CB TRP F 20 68.487 13.870 63.577 1.00 -0.07 \ ATOM 152 CG TRP F 20 69.083 15.231 63.358 1.00 -0.07 \ ATOM 153 CD1 TRP F 20 68.599 16.430 63.802 1.00 -0.07 \ ATOM 154 CD2 TRP F 20 70.311 15.526 62.666 1.00 -0.07 \ ATOM 155 NE1 TRP F 20 69.451 17.447 63.431 1.00 -0.07 \ ATOM 156 CE2 TRP F 20 70.507 16.918 62.735 1.00 -0.07 \ ATOM 157 CE3 TRP F 20 71.264 14.742 61.997 1.00 -0.07 \ ATOM 158 CZ2 TRP F 20 71.617 17.543 62.164 1.00 -0.07 \ ATOM 159 CZ3 TRP F 20 72.357 15.362 61.435 1.00 -0.07 \ ATOM 160 CH2 TRP F 20 72.526 16.749 61.522 1.00 -0.07 \ ATOM 161 N GLY F 21 65.817 13.859 62.171 1.00 0.04 \ ATOM 162 CA GLY F 21 64.856 14.388 61.226 1.00 0.04 \ ATOM 163 C GLY F 21 63.544 14.802 61.869 1.00 0.04 \ ATOM 164 O GLY F 21 63.174 15.981 61.843 1.00 0.04 \ ATOM 165 N LEU F 22 62.835 13.841 62.453 1.00 -0.09 \ ATOM 166 CA LEU F 22 61.547 14.119 63.095 1.00 -0.09 \ ATOM 167 C LEU F 22 61.641 15.224 64.141 1.00 -0.09 \ ATOM 168 O LEU F 22 60.658 15.904 64.426 1.00 -0.09 \ ATOM 169 CB LEU F 22 61.007 12.847 63.737 1.00 -0.09 \ ATOM 170 CG LEU F 22 61.035 11.656 62.784 1.00 -0.09 \ ATOM 171 CD1 LEU F 22 60.637 10.404 63.522 1.00 -0.09 \ ATOM 172 CD2 LEU F 22 60.105 11.910 61.610 1.00 -0.09 \ ATOM 173 N GLY F 23 62.824 15.386 64.724 1.00 1.85 \ ATOM 174 CA GLY F 23 63.004 16.428 65.708 1.00 1.85 \ ATOM 175 C GLY F 23 62.909 17.734 64.955 1.00 1.85 \ ATOM 176 O GLY F 23 62.058 18.576 65.253 1.00 1.85 \ ATOM 177 N VAL F 24 63.783 17.893 63.962 1.00 -2.10 \ ATOM 178 CA VAL F 24 63.805 19.097 63.137 1.00 -2.10 \ ATOM 179 C VAL F 24 62.400 19.313 62.622 1.00 -2.10 \ ATOM 180 O VAL F 24 61.778 20.334 62.888 1.00 -2.10 \ ATOM 181 CB VAL F 24 64.710 18.952 61.899 1.00 -2.10 \ ATOM 182 CG1 VAL F 24 64.972 20.315 61.311 1.00 -2.10 \ ATOM 183 CG2 VAL F 24 66.011 18.264 62.257 1.00 -2.10 \ ATOM 184 N LEU F 25 61.909 18.328 61.881 1.00 -0.07 \ ATOM 185 CA LEU F 25 60.576 18.375 61.316 1.00 -0.07 \ ATOM 186 C LEU F 25 59.551 18.803 62.363 1.00 -0.07 \ ATOM 187 O LEU F 25 58.655 19.569 62.061 1.00 -0.07 \ ATOM 188 CB LEU F 25 60.211 17.005 60.767 1.00 -0.07 \ ATOM 189 CG LEU F 25 59.062 16.966 59.763 1.00 -0.07 \ ATOM 190 CD1 LEU F 25 58.853 15.521 59.344 1.00 -0.07 \ ATOM 191 CD2 LEU F 25 57.779 17.535 60.355 1.00 -0.07 \ ATOM 192 N LEU F 26 59.680 18.303 63.590 1.00 1.85 \ ATOM 193 CA LEU F 26 58.756 18.650 64.666 1.00 1.85 \ ATOM 194 C LEU F 26 58.822 20.124 64.992 1.00 1.85 \ ATOM 195 O LEU F 26 57.810 20.802 65.048 1.00 1.85 \ ATOM 196 CB LEU F 26 59.090 17.865 65.926 1.00 1.85 \ ATOM 197 CG LEU F 26 58.047 16.813 66.257 1.00 1.85 \ ATOM 198 CD1 LEU F 26 56.688 17.484 66.240 1.00 1.85 \ ATOM 199 CD2 LEU F 26 58.092 15.692 65.245 1.00 1.85 \ ATOM 200 N LEU F 27 60.029 20.607 65.240 1.00 1.85 \ ATOM 201 CA LEU F 27 60.218 22.006 65.542 1.00 1.85 \ ATOM 202 C LEU F 27 59.640 22.837 64.410 1.00 1.85 \ ATOM 203 O LEU F 27 58.918 23.796 64.650 1.00 1.85 \ ATOM 204 CB LEU F 27 61.702 22.320 65.677 1.00 1.85 \ ATOM 205 CG LEU F 27 62.420 21.828 66.921 1.00 1.85 \ ATOM 206 CD1 LEU F 27 63.877 22.182 66.797 1.00 1.85 \ ATOM 207 CD2 LEU F 27 61.817 22.477 68.168 1.00 1.85 \ ATOM 208 N LYS F 28 59.965 22.466 63.175 1.00 -0.07 \ ATOM 209 CA LYS F 28 59.487 23.194 61.999 1.00 -0.07 \ ATOM 210 C LYS F 28 57.979 23.385 61.959 1.00 -0.07 \ ATOM 211 O LYS F 28 57.501 24.423 61.518 1.00 -0.07 \ ATOM 212 CB LYS F 28 59.936 22.505 60.701 1.00 -0.07 \ ATOM 213 CG LYS F 28 61.244 23.041 60.126 1.00 -0.07 \ ATOM 214 CD LYS F 28 61.540 22.500 58.720 1.00 -0.07 \ ATOM 215 CE LYS F 28 61.838 21.003 58.723 1.00 -0.07 \ ATOM 216 NZ LYS F 28 62.316 20.513 57.394 1.00 -0.07 \ ATOM 217 N ILE F 29 57.223 22.386 62.399 1.00 -0.07 \ ATOM 218 CA ILE F 29 55.774 22.518 62.397 1.00 -0.07 \ ATOM 219 C ILE F 29 55.278 23.190 63.677 1.00 -0.07 \ ATOM 220 O ILE F 29 54.188 22.892 64.155 1.00 -0.07 \ ATOM 221 CB ILE F 29 55.064 21.147 62.210 1.00 -0.07 \ ATOM 222 CG1 ILE F 29 55.627 20.109 63.175 1.00 -0.07 \ ATOM 223 CG2 ILE F 29 55.256 20.660 60.795 1.00 -0.07 \ ATOM 224 CD1 ILE F 29 55.090 18.706 62.934 1.00 -0.07 \ ATOM 225 N GLN F 30 56.092 24.094 64.226 1.00 -0.07 \ ATOM 226 CA GLN F 30 55.743 24.842 65.435 1.00 -0.07 \ ATOM 227 C GLN F 30 56.581 26.106 65.582 1.00 -0.07 \ ATOM 228 O GLN F 30 56.250 26.969 66.389 1.00 -0.07 \ ATOM 229 CB GLN F 30 55.905 23.986 66.696 1.00 -0.07 \ ATOM 230 CG GLN F 30 57.319 23.493 66.989 1.00 -0.07 \ ATOM 231 CD GLN F 30 57.782 23.835 68.402 1.00 -0.07 \ ATOM 232 OE1 GLN F 30 58.788 23.321 68.874 1.00 -0.07 \ ATOM 233 NE2 GLN F 30 57.054 24.717 69.070 1.00 -0.07 \ ATOM 234 N GLY F 31 57.669 26.205 64.816 1.00 -0.07 \ ATOM 235 CA GLY F 31 58.519 27.385 64.873 1.00 -0.07 \ ATOM 236 C GLY F 31 59.931 27.203 65.402 1.00 -0.07 \ ATOM 237 O GLY F 31 60.164 27.208 66.612 1.00 -0.07 \ ATOM 238 N ALA F 32 60.888 27.059 64.494 1.00 -0.08 \ ATOM 239 CA ALA F 32 62.280 26.889 64.891 1.00 -0.08 \ ATOM 240 C ALA F 32 63.092 28.176 64.658 1.00 -0.08 \ ATOM 241 O ALA F 32 63.379 28.532 63.517 1.00 -0.08 \ ATOM 242 CB ALA F 32 62.905 25.707 64.117 1.00 -0.08 \ """, "e1vf5F1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1vf5F1_csv", state=0, origin=1) cmd.zoom("e1vf5F1_csv", animate=-1)