cmd.read_pdbstr("""\ ATOM 1 N ILE H 3 62.545 -4.998 56.241 1.00 -0.35 \ ATOM 2 CA ILE H 3 61.370 -5.451 55.445 1.00 -0.35 \ ATOM 3 C ILE H 3 60.072 -4.942 56.075 1.00 -0.35 \ ATOM 4 O ILE H 3 59.175 -4.424 55.405 1.00 -0.35 \ ATOM 5 CB ILE H 3 61.325 -6.981 55.378 1.00 -0.35 \ ATOM 6 CG1 ILE H 3 60.104 -7.413 54.566 1.00 -0.35 \ ATOM 7 CG2 ILE H 3 61.339 -7.576 56.807 1.00 -0.35 \ ATOM 8 CD1 ILE H 3 60.055 -6.809 53.173 1.00 -0.35 \ ATOM 9 N ASP H 4 59.978 -5.129 57.380 1.00 -1.28 \ ATOM 10 CA ASP H 4 58.841 -4.671 58.147 1.00 -1.28 \ ATOM 11 C ASP H 4 59.522 -3.819 59.169 1.00 -1.28 \ ATOM 12 O ASP H 4 58.966 -3.466 60.200 1.00 -1.28 \ ATOM 13 CB ASP H 4 58.142 -5.839 58.792 1.00 -1.28 \ ATOM 14 CG ASP H 4 57.529 -6.746 57.774 1.00 -1.28 \ ATOM 15 OD1 ASP H 4 58.053 -6.754 56.641 1.00 -1.28 \ ATOM 16 OD2 ASP H 4 56.542 -7.442 58.098 1.00 -1.28 \ ATOM 17 N VAL H 5 60.786 -3.546 58.874 1.00 -1.33 \ ATOM 18 CA VAL H 5 61.573 -2.676 59.711 1.00 -1.33 \ ATOM 19 C VAL H 5 60.857 -1.368 59.368 1.00 -1.33 \ ATOM 20 O VAL H 5 60.433 -0.640 60.257 1.00 -1.33 \ ATOM 21 CB VAL H 5 63.088 -2.672 59.278 1.00 -1.33 \ ATOM 22 CG1 VAL H 5 63.817 -1.473 59.882 1.00 -1.33 \ ATOM 23 CG2 VAL H 5 63.771 -3.968 59.744 1.00 -1.33 \ ATOM 24 N LEU H 6 60.671 -1.111 58.072 1.00 -0.88 \ ATOM 25 CA LEU H 6 59.970 0.096 57.631 1.00 -0.88 \ ATOM 26 C LEU H 6 58.496 -0.237 57.496 1.00 -0.88 \ ATOM 27 O LEU H 6 57.638 0.500 57.982 1.00 -0.88 \ ATOM 28 CB LEU H 6 60.497 0.594 56.279 1.00 -0.88 \ ATOM 29 CG LEU H 6 61.835 1.341 56.210 1.00 -0.88 \ ATOM 30 CD1 LEU H 6 62.115 1.756 54.767 1.00 -0.88 \ ATOM 31 CD2 LEU H 6 61.793 2.565 57.111 1.00 -0.88 \ ATOM 32 N GLY H 7 58.212 -1.362 56.841 1.00 0.44 \ ATOM 33 CA GLY H 7 56.838 -1.780 56.660 1.00 0.44 \ ATOM 34 C GLY H 7 56.168 -1.749 58.011 1.00 0.44 \ ATOM 35 O GLY H 7 54.959 -1.880 58.095 1.00 0.44 \ ATOM 36 N TRP H 8 56.965 -1.560 59.064 1.00 1.44 \ ATOM 37 CA TRP H 8 56.467 -1.522 60.433 1.00 1.44 \ ATOM 38 C TRP H 8 56.965 -0.365 61.309 1.00 1.44 \ ATOM 39 O TRP H 8 56.182 0.224 62.053 1.00 1.44 \ ATOM 40 CB TRP H 8 56.780 -2.847 61.117 1.00 1.44 \ ATOM 41 CG TRP H 8 55.573 -3.528 61.595 1.00 1.44 \ ATOM 42 CD1 TRP H 8 55.200 -4.825 61.345 1.00 1.44 \ ATOM 43 CD2 TRP H 8 54.555 -2.964 62.437 1.00 1.44 \ ATOM 44 NE1 TRP H 8 54.011 -5.098 61.984 1.00 1.44 \ ATOM 45 CE2 TRP H 8 53.593 -3.975 62.662 1.00 1.44 \ ATOM 46 CE3 TRP H 8 54.364 -1.698 63.029 1.00 1.44 \ ATOM 47 CZ2 TRP H 8 52.448 -3.756 63.461 1.00 1.44 \ ATOM 48 CZ3 TRP H 8 53.226 -1.485 63.822 1.00 1.44 \ ATOM 49 CH2 TRP H 8 52.287 -2.509 64.027 1.00 1.44 \ ATOM 50 N VAL H 9 58.255 -0.041 61.262 1.00 -0.42 \ ATOM 51 CA VAL H 9 58.716 1.075 62.081 1.00 -0.42 \ ATOM 52 C VAL H 9 57.995 2.282 61.514 1.00 -0.42 \ ATOM 53 O VAL H 9 57.399 3.061 62.260 1.00 -0.42 \ ATOM 54 CB VAL H 9 60.289 1.296 62.029 1.00 -0.42 \ ATOM 55 CG1 VAL H 9 60.709 2.018 60.766 1.00 -0.42 \ ATOM 56 CG2 VAL H 9 60.756 2.086 63.252 1.00 -0.42 \ ATOM 57 N ALA H 10 58.013 2.408 60.184 1.00 -1.25 \ ATOM 58 CA ALA H 10 57.362 3.534 59.503 1.00 -1.25 \ ATOM 59 C ALA H 10 55.971 3.665 60.102 1.00 -1.25 \ ATOM 60 O ALA H 10 55.405 4.742 60.199 1.00 -1.25 \ ATOM 61 CB ALA H 10 57.292 3.270 57.967 1.00 -1.25 \ ATOM 62 N LEU H 11 55.448 2.532 60.538 1.00 -1.28 \ ATOM 63 CA LEU H 11 54.139 2.480 61.135 1.00 -1.28 \ ATOM 64 C LEU H 11 54.190 2.932 62.580 1.00 -1.28 \ ATOM 65 O LEU H 11 53.889 4.085 62.861 1.00 -1.28 \ ATOM 66 CB LEU H 11 53.601 1.063 61.056 1.00 -1.28 \ ATOM 67 CG LEU H 11 53.761 0.407 59.692 1.00 -1.28 \ ATOM 68 CD1 LEU H 11 52.960 -0.883 59.703 1.00 -1.28 \ ATOM 69 CD2 LEU H 11 53.286 1.344 58.583 1.00 -1.28 \ ATOM 70 N LEU H 12 54.578 2.033 63.494 1.00 -0.93 \ ATOM 71 CA LEU H 12 54.619 2.366 64.925 1.00 -0.93 \ ATOM 72 C LEU H 12 55.035 3.826 65.115 1.00 -0.93 \ ATOM 73 O LEU H 12 54.368 4.585 65.819 1.00 -0.93 \ ATOM 74 CB LEU H 12 55.580 1.428 65.705 1.00 -0.93 \ ATOM 75 CG LEU H 12 55.245 1.073 67.185 1.00 -0.93 \ ATOM 76 CD1 LEU H 12 56.306 0.150 67.758 1.00 -0.93 \ ATOM 77 CD2 LEU H 12 55.143 2.320 68.062 1.00 -0.93 \ ATOM 78 N VAL H 13 56.114 4.216 64.444 1.00 -1.27 \ ATOM 79 CA VAL H 13 56.648 5.566 64.547 1.00 -1.27 \ ATOM 80 C VAL H 13 55.693 6.702 64.231 1.00 -1.27 \ ATOM 81 O VAL H 13 55.529 7.623 65.029 1.00 -1.27 \ ATOM 82 CB VAL H 13 57.886 5.743 63.657 1.00 -1.27 \ ATOM 83 CG1 VAL H 13 58.309 7.186 63.647 1.00 -1.27 \ ATOM 84 CG2 VAL H 13 59.022 4.910 64.191 1.00 -1.27 \ ATOM 85 N VAL H 14 55.062 6.658 63.070 1.00 -1.29 \ ATOM 86 CA VAL H 14 54.169 7.746 62.710 1.00 -1.29 \ ATOM 87 C VAL H 14 52.930 7.861 63.586 1.00 -1.29 \ ATOM 88 O VAL H 14 52.370 8.949 63.724 1.00 -1.29 \ ATOM 89 CB VAL H 14 53.747 7.637 61.254 1.00 -1.29 \ ATOM 90 CG1 VAL H 14 52.961 8.881 60.855 1.00 -1.29 \ ATOM 91 CG2 VAL H 14 54.985 7.463 60.384 1.00 -1.29 \ ATOM 92 N PHE H 15 52.515 6.744 64.182 1.00 1.44 \ ATOM 93 CA PHE H 15 51.337 6.701 65.055 1.00 1.44 \ ATOM 94 C PHE H 15 51.564 7.595 66.265 1.00 1.44 \ ATOM 95 O PHE H 15 50.810 8.537 66.504 1.00 1.44 \ ATOM 96 CB PHE H 15 51.087 5.266 65.513 1.00 1.44 \ ATOM 97 CG PHE H 15 51.111 4.272 64.399 1.00 1.44 \ ATOM 98 CD1 PHE H 15 51.567 2.979 64.616 1.00 1.44 \ ATOM 99 CD2 PHE H 15 50.686 4.628 63.122 1.00 1.44 \ ATOM 100 CE1 PHE H 15 51.603 2.044 63.572 1.00 1.44 \ ATOM 101 CE2 PHE H 15 50.716 3.705 62.067 1.00 1.44 \ ATOM 102 CZ PHE H 15 51.174 2.412 62.292 1.00 1.44 \ ATOM 103 N THR H 16 52.606 7.284 67.034 1.00 0.26 \ ATOM 104 CA THR H 16 52.936 8.087 68.204 1.00 0.26 \ ATOM 105 C THR H 16 53.269 9.498 67.678 1.00 0.26 \ ATOM 106 O THR H 16 53.175 10.477 68.421 1.00 0.26 \ ATOM 107 CB THR H 16 54.147 7.464 69.048 1.00 0.26 \ ATOM 108 OG1 THR H 16 54.953 6.643 68.199 1.00 0.26 \ ATOM 109 CG2 THR H 16 53.649 6.594 70.231 1.00 0.26 \ ATOM 110 N TRP H 17 53.627 9.606 66.392 1.00 0.30 \ ATOM 111 CA TRP H 17 53.939 10.915 65.805 1.00 0.30 \ ATOM 112 C TRP H 17 52.664 11.705 65.542 1.00 0.30 \ ATOM 113 O TRP H 17 52.585 12.898 65.848 1.00 0.30 \ ATOM 114 CB TRP H 17 54.696 10.787 64.488 1.00 0.30 \ ATOM 115 CG TRP H 17 55.133 12.135 63.980 1.00 0.30 \ ATOM 116 CD1 TRP H 17 55.939 13.026 64.629 1.00 0.30 \ ATOM 117 CD2 TRP H 17 54.799 12.742 62.724 1.00 0.30 \ ATOM 118 NE1 TRP H 17 56.132 14.151 63.859 1.00 0.30 \ ATOM 119 CE2 TRP H 17 55.445 14.004 62.684 1.00 0.30 \ ATOM 120 CE3 TRP H 17 54.019 12.345 61.627 1.00 0.30 \ ATOM 121 CZ2 TRP H 17 55.337 14.873 61.589 1.00 0.30 \ ATOM 122 CZ3 TRP H 17 53.912 13.212 60.532 1.00 0.30 \ ATOM 123 CH2 TRP H 17 54.570 14.462 60.526 1.00 0.30 \ ATOM 124 N SER H 18 51.678 11.042 64.941 1.00 1.44 \ ATOM 125 CA SER H 18 50.397 11.675 64.671 1.00 1.44 \ ATOM 126 C SER H 18 49.940 12.247 66.000 1.00 1.44 \ ATOM 127 O SER H 18 49.623 13.430 66.097 1.00 1.44 \ ATOM 128 CB SER H 18 49.380 10.641 64.172 1.00 1.44 \ ATOM 129 OG SER H 18 48.082 11.203 64.038 1.00 1.44 \ ATOM 130 N ILE H 19 49.931 11.392 67.022 1.00 0.23 \ ATOM 131 CA ILE H 19 49.527 11.791 68.364 1.00 0.23 \ ATOM 132 C ILE H 19 50.306 13.022 68.758 1.00 0.23 \ ATOM 133 O ILE H 19 49.785 13.907 69.427 1.00 0.23 \ ATOM 134 CB ILE H 19 49.834 10.703 69.410 1.00 0.23 \ ATOM 135 CG1 ILE H 19 49.128 9.402 69.030 1.00 0.23 \ ATOM 136 CG2 ILE H 19 49.395 11.184 70.797 1.00 0.23 \ ATOM 137 CD1 ILE H 19 49.255 8.304 70.053 1.00 0.23 \ ATOM 138 N ALA H 20 51.564 13.062 68.336 1.00 -0.37 \ ATOM 139 CA ALA H 20 52.442 14.180 68.638 1.00 -0.37 \ ATOM 140 C ALA H 20 51.949 15.440 67.959 1.00 -0.37 \ ATOM 141 O ALA H 20 51.519 16.386 68.609 1.00 -0.37 \ ATOM 142 CB ALA H 20 53.849 13.865 68.175 1.00 -0.37 \ ATOM 143 N MET H 21 52.015 15.441 66.635 1.00 0.23 \ ATOM 144 CA MET H 21 51.589 16.595 65.866 1.00 0.23 \ ATOM 145 C MET H 21 50.155 16.998 66.180 1.00 0.23 \ ATOM 146 O MET H 21 49.788 18.155 66.046 1.00 0.23 \ ATOM 147 CB MET H 21 51.768 16.319 64.367 1.00 0.23 \ ATOM 148 CG MET H 21 51.472 14.889 63.957 1.00 0.23 \ ATOM 149 SD MET H 21 50.042 14.730 62.860 1.00 0.23 \ ATOM 150 CE MET H 21 50.849 14.638 61.232 1.00 0.23 \ ATOM 151 N VAL H 22 49.342 16.055 66.627 1.00 0.44 \ ATOM 152 CA VAL H 22 47.958 16.373 66.935 1.00 0.44 \ ATOM 153 C VAL H 22 47.795 16.886 68.347 1.00 0.44 \ ATOM 154 O VAL H 22 47.160 17.913 68.562 1.00 0.44 \ ATOM 155 CB VAL H 22 47.042 15.157 66.750 1.00 0.44 \ ATOM 156 CG1 VAL H 22 45.648 15.487 67.258 1.00 0.44 \ ATOM 157 CG2 VAL H 22 46.991 14.758 65.271 1.00 0.44 \ ATOM 158 N VAL H 23 48.352 16.174 69.320 1.00 0.37 \ ATOM 159 CA VAL H 23 48.232 16.630 70.693 1.00 0.37 \ ATOM 160 C VAL H 23 48.722 18.069 70.721 1.00 0.37 \ ATOM 161 O VAL H 23 48.431 18.809 71.647 1.00 0.37 \ ATOM 162 CB VAL H 23 49.054 15.774 71.673 1.00 0.37 \ ATOM 163 CG1 VAL H 23 48.459 14.382 71.771 1.00 0.37 \ ATOM 164 CG2 VAL H 23 50.493 15.713 71.227 1.00 0.37 \ ATOM 165 N TRP H 24 49.470 18.472 69.700 1.00 1.44 \ ATOM 166 CA TRP H 24 49.929 19.852 69.632 1.00 1.44 \ ATOM 167 C TRP H 24 48.701 20.731 69.388 1.00 1.44 \ ATOM 168 O TRP H 24 48.376 21.606 70.186 1.00 1.44 \ ATOM 169 CB TRP H 24 50.900 20.070 68.466 1.00 1.44 \ ATOM 170 CG TRP H 24 50.729 21.445 67.845 1.00 1.44 \ ATOM 171 CD1 TRP H 24 51.148 22.642 68.364 1.00 1.44 \ ATOM 172 CD2 TRP H 24 49.967 21.769 66.665 1.00 1.44 \ ATOM 173 NE1 TRP H 24 50.688 23.687 67.590 1.00 1.44 \ ATOM 174 CE2 TRP H 24 49.962 23.178 66.542 1.00 1.44 \ ATOM 175 CE3 TRP H 24 49.284 21.004 65.705 1.00 1.44 \ ATOM 176 CZ2 TRP H 24 49.298 23.837 65.495 1.00 1.44 \ ATOM 177 CZ3 TRP H 24 48.624 21.660 64.666 1.00 1.44 \ ATOM 178 CH2 TRP H 24 48.638 23.061 64.572 1.00 1.44 \ ATOM 179 N GLY H 25 48.032 20.491 68.261 1.00 0.30 \ ATOM 180 CA GLY H 25 46.874 21.275 67.886 1.00 0.30 \ ATOM 181 C GLY H 25 45.916 21.355 69.036 1.00 0.30 \ ATOM 182 O GLY H 25 45.523 22.446 69.440 1.00 0.30 \ ATOM 183 N ARG H 26 45.571 20.183 69.563 1.00 1.44 \ ATOM 184 CA ARG H 26 44.646 20.032 70.687 1.00 1.44 \ ATOM 185 C ARG H 26 44.788 21.092 71.789 1.00 1.44 \ ATOM 186 O ARG H 26 43.797 21.667 72.250 1.00 1.44 \ ATOM 187 CB ARG H 26 44.815 18.643 71.325 1.00 1.44 \ ATOM 188 CG ARG H 26 44.654 17.451 70.378 1.00 1.44 \ ATOM 189 CD ARG H 26 44.790 16.127 71.148 1.00 1.44 \ ATOM 190 NE ARG H 26 44.626 14.949 70.295 1.00 1.44 \ ATOM 191 CZ ARG H 26 44.678 13.696 70.741 1.00 1.44 \ ATOM 192 NH1 ARG H 26 44.887 13.460 72.033 1.00 1.44 \ ATOM 193 NH2 ARG H 26 44.524 12.678 69.901 1.00 1.44 \ ATOM 194 N ASN H 27 46.025 21.336 72.211 1.00 0.30 \ ATOM 195 CA ASN H 27 46.318 22.296 73.272 1.00 0.30 \ ATOM 196 C ASN H 27 46.796 23.627 72.691 1.00 0.30 \ ATOM 197 O ASN H 27 46.932 24.631 73.416 1.00 0.30 \ ATOM 198 CB ASN H 27 47.392 21.711 74.185 1.00 0.30 \ ATOM 199 CG ASN H 27 47.224 20.207 74.403 1.00 0.30 \ ATOM 200 OD1 ASN H 27 46.248 19.751 74.990 1.00 0.30 \ ATOM 201 ND2 ASN H 27 48.183 19.437 73.924 1.00 0.30 \ ATOM 202 N GLY H 28 47.073 23.600 71.385 1.00 1.44 \ ATOM 203 CA GLY H 28 47.508 24.777 70.665 1.00 1.44 \ ATOM 204 C GLY H 28 46.231 25.555 70.503 1.00 1.44 \ ATOM 205 O GLY H 28 46.230 26.697 70.046 1.00 1.44 \ ATOM 206 N LEU H 29 45.137 24.903 70.900 1.00 -1.00 \ ATOM 207 CA LEU H 29 43.787 25.464 70.851 1.00 -1.00 \ ATOM 208 C LEU H 29 43.109 25.311 72.231 1.00 -1.00 \ ATOM 209 O LEU H 29 42.147 24.525 72.333 1.00 -1.00 \ ATOM 210 CB LEU H 29 42.952 24.754 69.764 1.00 -1.00 \ ATOM 211 CG LEU H 29 43.538 24.560 68.351 1.00 -1.00 \ ATOM 212 CD1 LEU H 29 42.462 23.977 67.455 1.00 -1.00 \ ATOM 213 CD2 LEU H 29 44.029 25.877 67.756 1.00 -1.00 \ ATOM 214 OXT LEU H 29 43.551 25.965 73.206 1.00 -1.00 \ """, "e1vf5H1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1vf5H1_csv", state=0, origin=1) cmd.zoom("e1vf5H1_csv", animate=-1)