cmd.read_pdbstr("""\ ATOM 1 N MET o 1 165.359 142.972 207.169 1.00 -1.00 \ ATOM 2 CA MET o 1 166.438 143.623 207.977 1.00 -1.00 \ ATOM 3 C MET o 1 165.894 144.363 209.209 1.00 -1.00 \ ATOM 4 O MET o 1 164.671 144.449 209.418 1.00 -1.00 \ ATOM 5 CB MET o 1 167.238 144.598 207.094 1.00 -1.00 \ ATOM 6 CG MET o 1 166.374 145.609 206.337 1.00 -1.00 \ ATOM 7 SD MET o 1 167.337 146.829 205.401 1.00 -1.00 \ ATOM 8 CE MET o 1 167.227 148.278 206.497 1.00 -1.00 \ ATOM 9 N ARG o 2 166.815 144.884 210.022 1.00 0.39 \ ATOM 10 CA ARG o 2 166.476 145.632 211.233 1.00 0.39 \ ATOM 11 C ARG o 2 165.825 146.970 210.849 1.00 0.39 \ ATOM 12 O ARG o 2 166.421 147.796 210.143 1.00 0.39 \ ATOM 13 CB ARG o 2 167.744 145.863 212.069 1.00 0.39 \ ATOM 14 CG ARG o 2 167.507 146.460 213.452 1.00 0.39 \ ATOM 15 CD ARG o 2 168.832 146.645 214.189 1.00 0.39 \ ATOM 16 NE ARG o 2 168.702 147.357 215.464 1.00 0.39 \ ATOM 17 CZ ARG o 2 168.323 146.806 216.619 1.00 0.39 \ ATOM 18 NH1 ARG o 2 168.024 145.515 216.690 1.00 0.39 \ ATOM 19 NH2 ARG o 2 168.246 147.550 217.715 1.00 0.39 \ ATOM 20 N ALA o 3 164.589 147.158 211.310 1.00 0.39 \ ATOM 21 CA ALA o 3 163.811 148.363 211.029 1.00 0.39 \ ATOM 22 C ALA o 3 164.297 149.603 211.778 1.00 0.39 \ ATOM 23 O ALA o 3 163.728 150.687 211.621 1.00 0.39 \ ATOM 24 CB ALA o 3 162.336 148.112 211.344 1.00 0.39 \ ATOM 25 N LYS o 4 165.327 149.434 212.604 1.00 0.39 \ ATOM 26 CA LYS o 4 165.916 150.538 213.365 1.00 0.39 \ ATOM 27 C LYS o 4 166.827 151.281 212.382 1.00 0.39 \ ATOM 28 O LYS o 4 167.042 152.496 212.484 1.00 0.39 \ ATOM 29 CB LYS o 4 166.744 149.984 214.537 1.00 0.39 \ ATOM 30 CG LYS o 4 167.534 151.028 215.333 1.00 0.39 \ ATOM 31 CD LYS o 4 166.718 151.681 216.456 1.00 0.39 \ ATOM 32 CE LYS o 4 166.531 150.746 217.651 1.00 0.39 \ ATOM 33 NZ LYS o 4 165.669 149.572 217.347 1.00 0.39 \ ATOM 34 N TRP o 5 167.339 150.514 211.420 1.00 0.39 \ ATOM 35 CA TRP o 5 168.226 151.011 210.375 1.00 0.39 \ ATOM 36 C TRP o 5 167.404 151.632 209.238 1.00 0.39 \ ATOM 37 O TRP o 5 167.908 152.463 208.474 1.00 0.39 \ ATOM 38 CB TRP o 5 169.077 149.856 209.827 1.00 0.39 \ ATOM 39 CG TRP o 5 169.970 149.147 210.841 1.00 0.39 \ ATOM 40 CD1 TRP o 5 170.540 147.913 210.699 1.00 0.39 \ ATOM 41 CD2 TRP o 5 170.432 149.654 212.108 1.00 0.39 \ ATOM 42 NE1 TRP o 5 171.327 147.618 211.788 1.00 0.39 \ ATOM 43 CE2 TRP o 5 171.279 148.666 212.669 1.00 0.39 \ ATOM 44 CE3 TRP o 5 170.213 150.844 212.822 1.00 0.39 \ ATOM 45 CZ2 TRP o 5 171.908 148.832 213.911 1.00 0.39 \ ATOM 46 CZ3 TRP o 5 170.836 151.009 214.055 1.00 0.39 \ ATOM 47 CH2 TRP o 5 171.675 150.003 214.588 1.00 0.39 \ ATOM 48 N ARG o 6 166.142 151.212 209.131 1.00 0.39 \ ATOM 49 CA ARG o 6 165.233 151.722 208.105 1.00 0.39 \ ATOM 50 C ARG o 6 164.698 153.086 208.547 1.00 0.39 \ ATOM 51 O ARG o 6 164.283 153.898 207.715 1.00 0.39 \ ATOM 52 CB ARG o 6 164.065 150.743 207.905 1.00 0.39 \ ATOM 53 CG ARG o 6 163.255 150.933 206.610 1.00 0.39 \ ATOM 54 CD ARG o 6 164.099 150.633 205.360 1.00 0.39 \ ATOM 55 NE ARG o 6 163.295 150.397 204.151 1.00 0.39 \ ATOM 56 CZ ARG o 6 162.586 151.323 203.500 1.00 0.39 \ ATOM 57 NH1 ARG o 6 162.565 152.581 203.930 1.00 0.39 \ ATOM 58 NH2 ARG o 6 161.895 150.990 202.410 1.00 0.39 \ ATOM 59 N LYS o 7 164.715 153.328 209.860 1.00 0.39 \ ATOM 60 CA LYS o 7 164.227 154.589 210.421 1.00 0.39 \ ATOM 61 C LYS o 7 165.361 155.622 210.472 1.00 0.39 \ ATOM 62 O LYS o 7 165.127 156.817 210.679 1.00 0.39 \ ATOM 63 CB LYS o 7 163.650 154.356 211.827 1.00 0.39 \ ATOM 64 CG LYS o 7 162.785 155.504 212.358 1.00 0.39 \ ATOM 65 CD LYS o 7 162.155 155.167 213.706 1.00 0.39 \ ATOM 66 CE LYS o 7 161.206 156.271 214.173 1.00 0.39 \ ATOM 67 NZ LYS o 7 160.544 155.946 215.475 1.00 0.39 \ ATOM 68 N LYS o 8 166.590 155.144 210.290 1.00 0.39 \ ATOM 69 CA LYS o 8 167.774 156.001 210.280 1.00 0.39 \ ATOM 70 C LYS o 8 167.989 156.452 208.833 1.00 0.39 \ ATOM 71 O LYS o 8 168.481 157.556 208.570 1.00 0.39 \ ATOM 72 CB LYS o 8 169.004 155.220 210.771 1.00 0.39 \ ATOM 73 CG LYS o 8 170.337 155.958 210.604 1.00 0.39 \ ATOM 74 CD LYS o 8 171.528 155.125 211.079 1.00 0.39 \ ATOM 75 CE LYS o 8 171.599 155.042 212.604 1.00 0.39 \ ATOM 76 NZ LYS o 8 171.872 156.366 213.255 1.00 0.39 \ ATOM 77 N ARG o 9 167.604 155.575 207.906 1.00 0.39 \ ATOM 78 CA ARG o 9 167.713 155.825 206.473 1.00 0.39 \ ATOM 79 C ARG o 9 166.832 157.022 206.101 1.00 0.39 \ ATOM 80 O ARG o 9 167.316 158.019 205.552 1.00 0.39 \ ATOM 81 CB ARG o 9 167.260 154.578 205.697 1.00 0.39 \ ATOM 82 CG ARG o 9 167.351 154.687 204.176 1.00 0.39 \ ATOM 83 CD ARG o 9 166.698 153.485 203.479 1.00 0.39 \ ATOM 84 NE ARG o 9 167.394 152.217 203.723 1.00 0.39 \ ATOM 85 CZ ARG o 9 168.480 151.800 203.070 1.00 0.39 \ ATOM 86 NH1 ARG o 9 169.024 152.542 202.112 1.00 0.39 \ ATOM 87 NH2 ARG o 9 169.027 150.628 203.377 1.00 0.39 \ ATOM 88 N THR o 10 165.541 156.910 206.419 1.00 -2.46 \ ATOM 89 CA THR o 10 164.552 157.947 206.141 1.00 -2.46 \ ATOM 90 C THR o 10 164.791 159.227 206.940 1.00 -2.46 \ ATOM 91 O THR o 10 164.456 160.320 206.482 1.00 -2.46 \ ATOM 92 CB THR o 10 163.108 157.447 206.451 1.00 -2.46 \ ATOM 93 OG1 THR o 10 162.979 157.159 207.854 1.00 -2.46 \ ATOM 94 CG2 THR o 10 162.791 156.188 205.637 1.00 -2.46 \ ATOM 95 N ARG o 11 165.362 159.090 208.134 1.00 0.39 \ ATOM 96 CA ARG o 11 165.633 160.243 208.983 1.00 0.39 \ ATOM 97 C ARG o 11 166.547 161.241 208.269 1.00 0.39 \ ATOM 98 O ARG o 11 166.198 162.418 208.121 1.00 0.39 \ ATOM 99 CB ARG o 11 166.273 159.794 210.305 1.00 0.39 \ ATOM 100 CG ARG o 11 165.570 160.324 211.558 1.00 0.39 \ ATOM 101 CD ARG o 11 164.124 159.836 211.639 1.00 0.39 \ ATOM 102 NE ARG o 11 163.448 160.287 212.856 1.00 0.39 \ ATOM 103 CZ ARG o 11 163.679 159.804 214.075 1.00 0.39 \ ATOM 104 NH1 ARG o 11 164.575 158.839 214.257 1.00 0.39 \ ATOM 105 NH2 ARG o 11 163.018 160.297 215.117 1.00 0.39 \ ATOM 106 N ARG o 12 167.704 160.767 207.806 1.00 0.39 \ ATOM 107 CA ARG o 12 168.661 161.633 207.113 1.00 0.39 \ ATOM 108 C ARG o 12 168.221 161.991 205.694 1.00 0.39 \ ATOM 109 O ARG o 12 168.639 163.017 205.151 1.00 0.39 \ ATOM 110 CB ARG o 12 170.043 160.963 207.066 1.00 0.39 \ ATOM 111 CG ARG o 12 170.727 160.833 208.421 1.00 0.39 \ ATOM 112 CD ARG o 12 172.076 160.120 208.313 1.00 0.39 \ ATOM 113 NE ARG o 12 172.719 159.991 209.622 1.00 0.39 \ ATOM 114 CZ ARG o 12 173.868 159.354 209.851 1.00 0.39 \ ATOM 115 NH1 ARG o 12 174.530 158.768 208.856 1.00 0.39 \ ATOM 116 NH2 ARG o 12 174.359 159.299 211.087 1.00 0.39 \ ATOM 117 N LEU o 13 167.373 161.150 205.104 1.00 0.39 \ ATOM 118 CA LEU o 13 166.890 161.372 203.742 1.00 0.39 \ ATOM 119 C LEU o 13 165.854 162.497 203.684 1.00 0.39 \ ATOM 120 O LEU o 13 165.760 163.205 202.678 1.00 0.39 \ ATOM 121 CB LEU o 13 166.306 160.067 203.173 1.00 0.39 \ ATOM 122 CG LEU o 13 166.595 159.643 201.716 1.00 0.39 \ ATOM 123 CD1 LEU o 13 165.736 160.452 200.749 1.00 0.39 \ ATOM 124 CD2 LEU o 13 168.092 159.798 201.406 1.00 0.39 \ ATOM 125 N LYS o 14 165.083 162.662 204.759 1.00 0.39 \ ATOM 126 CA LYS o 14 164.078 163.726 204.825 1.00 0.39 \ ATOM 127 C LYS o 14 164.772 165.053 205.140 1.00 0.39 \ ATOM 128 O LYS o 14 164.382 166.111 204.634 1.00 0.39 \ ATOM 129 CB LYS o 14 163.038 163.425 205.914 1.00 0.39 \ ATOM 130 CG LYS o 14 162.162 162.203 205.650 1.00 0.39 \ ATOM 131 CD LYS o 14 161.145 161.990 206.777 1.00 0.39 \ ATOM 132 CE LYS o 14 161.828 161.745 208.129 1.00 0.39 \ ATOM 133 NZ LYS o 14 160.851 161.572 209.249 1.00 0.39 \ ATOM 134 N ARG o 15 165.806 164.978 205.978 1.00 0.39 \ ATOM 135 CA ARG o 15 166.585 166.145 206.391 1.00 0.39 \ ATOM 136 C ARG o 15 167.422 166.659 205.210 1.00 0.39 \ ATOM 137 O ARG o 15 167.688 167.859 205.088 1.00 0.39 \ ATOM 138 CB ARG o 15 167.482 165.748 207.575 1.00 0.39 \ ATOM 139 CG ARG o 15 168.206 166.900 208.267 1.00 0.39 \ ATOM 140 CD ARG o 15 168.726 166.486 209.648 1.00 0.39 \ ATOM 141 NE ARG o 15 169.551 165.276 209.606 1.00 0.39 \ ATOM 142 CZ ARG o 15 170.113 164.703 210.670 1.00 0.39 \ ATOM 143 NH1 ARG o 15 169.950 165.224 211.884 1.00 0.39 \ ATOM 144 NH2 ARG o 15 170.836 163.599 210.522 1.00 0.39 \ ATOM 145 N LYS o 16 167.822 165.732 204.342 1.00 0.39 \ ATOM 146 CA LYS o 16 168.613 166.036 203.151 1.00 0.39 \ ATOM 147 C LYS o 16 167.768 166.817 202.138 1.00 0.39 \ ATOM 148 O LYS o 16 168.203 167.850 201.614 1.00 0.39 \ ATOM 149 CB LYS o 16 169.120 164.721 202.534 1.00 0.39 \ ATOM 150 CG LYS o 16 169.872 164.843 201.205 1.00 0.39 \ ATOM 151 CD LYS o 16 170.364 163.470 200.728 1.00 0.39 \ ATOM 152 CE LYS o 16 171.097 163.536 199.385 1.00 0.39 \ ATOM 153 NZ LYS o 16 170.213 163.911 198.245 1.00 0.39 \ ATOM 154 N ARG o 17 166.556 166.321 201.886 1.00 0.39 \ ATOM 155 CA ARG o 17 165.624 166.934 200.933 1.00 0.39 \ ATOM 156 C ARG o 17 164.942 168.176 201.513 1.00 0.39 \ ATOM 157 O ARG o 17 164.178 168.858 200.826 1.00 0.39 \ ATOM 158 CB ARG o 17 164.545 165.919 200.515 1.00 0.39 \ ATOM 159 CG ARG o 17 165.072 164.549 200.073 1.00 0.39 \ ATOM 160 CD ARG o 17 163.969 163.690 199.430 1.00 0.39 \ ATOM 161 NE ARG o 17 162.816 163.455 200.307 1.00 0.39 \ ATOM 162 CZ ARG o 17 161.653 162.934 199.907 1.00 0.39 \ ATOM 163 NH1 ARG o 17 161.469 162.586 198.636 1.00 0.39 \ ATOM 164 NH2 ARG o 17 160.666 162.763 200.778 1.00 0.39 \ ATOM 165 N ARG o 18 165.228 168.454 202.781 1.00 0.39 \ ATOM 166 CA ARG o 18 164.660 169.593 203.491 1.00 0.39 \ ATOM 167 C ARG o 18 165.462 170.855 203.202 1.00 0.39 \ ATOM 168 O ARG o 18 164.902 171.946 203.036 1.00 0.39 \ ATOM 169 CB ARG o 18 164.670 169.305 204.992 1.00 0.39 \ ATOM 170 CG ARG o 18 164.118 170.404 205.877 1.00 0.39 \ ATOM 171 CD ARG o 18 163.949 169.867 207.284 1.00 0.39 \ ATOM 172 NE ARG o 18 163.193 168.614 207.259 1.00 0.39 \ ATOM 173 CZ ARG o 18 162.876 167.893 208.333 1.00 0.39 \ ATOM 174 NH1 ARG o 18 163.247 168.291 209.543 1.00 0.39 \ ATOM 175 NH2 ARG o 18 162.185 166.766 208.194 1.00 0.39 \ ATOM 176 N LYS o 19 166.779 170.686 203.140 1.00 0.39 \ ATOM 177 CA LYS o 19 167.701 171.785 202.876 1.00 0.39 \ ATOM 178 C LYS o 19 167.787 172.072 201.370 1.00 0.39 \ ATOM 179 O LYS o 19 168.225 173.153 200.949 1.00 0.39 \ ATOM 180 CB LYS o 19 169.083 171.438 203.456 1.00 0.39 \ ATOM 181 CG LYS o 19 169.156 171.525 204.995 1.00 0.39 \ ATOM 182 CD LYS o 19 168.140 170.618 205.701 1.00 0.39 \ ATOM 183 CE LYS o 19 168.079 170.872 207.215 1.00 0.39 \ ATOM 184 NZ LYS o 19 169.358 170.581 207.942 1.00 0.39 \ ATOM 185 N VAL o 20 167.346 171.098 200.573 1.00 -2.46 \ ATOM 186 CA VAL o 20 167.336 171.209 199.112 1.00 -2.46 \ ATOM 187 C VAL o 20 166.100 172.003 198.661 1.00 -2.46 \ ATOM 188 O VAL o 20 166.095 172.616 197.584 1.00 -2.46 \ ATOM 189 CB VAL o 20 167.311 169.802 198.443 1.00 -2.46 \ ATOM 190 CG1 VAL o 20 167.350 169.942 196.924 1.00 -2.46 \ ATOM 191 CG2 VAL o 20 168.493 168.966 198.922 1.00 -2.46 \ ATOM 192 N ARG o 21 165.060 171.994 199.497 1.00 0.39 \ ATOM 193 CA ARG o 21 163.822 172.713 199.202 1.00 0.39 \ ATOM 194 C ARG o 21 163.961 174.169 199.668 1.00 0.39 \ ATOM 195 O ARG o 21 163.204 175.050 199.246 1.00 0.39 \ ATOM 196 CB ARG o 21 162.642 172.034 199.908 1.00 0.39 \ ATOM 197 CG ARG o 21 161.316 172.181 199.177 1.00 0.39 \ ATOM 198 CD ARG o 21 160.168 171.621 199.999 1.00 0.39 \ ATOM 199 NE ARG o 21 158.953 171.494 199.201 1.00 0.39 \ ATOM 200 CZ ARG o 21 157.761 171.163 199.686 1.00 0.39 \ ATOM 201 NH1 ARG o 21 156.722 171.072 198.867 1.00 0.39 \ ATOM 202 NH2 ARG o 21 157.607 170.932 200.985 1.00 0.39 \ ATOM 203 N ALA o 22 164.944 174.401 200.539 1.00 -2.46 \ ATOM 204 CA ALA o 22 165.240 175.730 201.072 1.00 -2.46 \ ATOM 205 C ALA o 22 166.125 176.496 200.081 1.00 -2.46 \ ATOM 206 O ALA o 22 166.328 177.710 200.212 1.00 -2.46 \ ATOM 207 CB ALA o 22 165.943 175.604 202.427 1.00 -2.46 \ ATOM 208 N ARG o 23 166.658 175.768 199.098 1.00 0.39 \ ATOM 209 CA ARG o 23 167.505 176.356 198.060 1.00 0.39 \ ATOM 210 C ARG o 23 166.655 177.043 196.982 1.00 0.39 \ ATOM 211 O ARG o 23 167.187 177.737 196.102 1.00 0.39 \ ATOM 212 CB ARG o 23 168.385 175.279 197.409 1.00 0.39 \ ATOM 213 CG ARG o 23 169.554 174.821 198.266 1.00 0.39 \ ATOM 214 CD ARG o 23 170.437 173.824 197.522 1.00 0.39 \ ATOM 215 NE ARG o 23 171.851 174.050 197.814 1.00 0.39 \ ATOM 216 CZ ARG o 23 172.547 175.104 197.389 1.00 0.39 \ ATOM 217 NH1 ARG o 23 173.825 175.225 197.714 1.00 0.39 \ ATOM 218 NH2 ARG o 23 171.973 176.033 196.631 1.00 0.39 \ ATOM 219 N SER o 24 165.338 176.838 197.066 1.00 -1.00 \ ATOM 220 CA SER o 24 164.363 177.412 196.132 1.00 -1.00 \ ATOM 221 C SER o 24 163.551 178.557 196.768 1.00 -1.00 \ ATOM 222 O SER o 24 162.578 179.044 196.175 1.00 -1.00 \ ATOM 223 CB SER o 24 163.400 176.318 195.624 1.00 -1.00 \ ATOM 224 OG SER o 24 164.050 175.378 194.781 1.00 -1.00 \ ATOM 225 N LYS o 25 163.955 178.975 197.971 1.00 -1.00 \ ATOM 226 CA LYS o 25 163.284 180.065 198.694 1.00 -1.00 \ ATOM 227 C LYS o 25 164.230 181.250 198.919 1.00 -1.00 \ ATOM 228 O LYS o 25 165.420 181.142 198.541 1.00 -1.00 \ ATOM 229 CB LYS o 25 162.759 179.589 200.054 1.00 -1.00 \ ATOM 230 CG LYS o 25 161.757 178.446 200.021 1.00 -1.00 \ ATOM 231 CD LYS o 25 161.274 178.125 201.431 1.00 -1.00 \ ATOM 232 CE LYS o 25 162.429 177.744 202.362 1.00 -1.00 \ ATOM 233 NZ LYS o 25 161.968 177.462 203.757 1.00 -1.00 \ ATOM 234 OXT LYS o 25 163.777 182.273 199.483 1.00 -1.00 \ """, "e1vxyo1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1vxyo1_csv", state=0, origin=1) cmd.zoom("e1vxyo1_csv", animate=-1)