cmd.read_pdbstr("""\ ATOM 1 N LEU L 5 47.371 31.617 98.225 1.00 -1.00 \ ATOM 2 CA LEU L 5 46.884 30.481 99.011 1.00 -1.00 \ ATOM 3 C LEU L 5 45.700 29.691 98.484 1.00 -1.00 \ ATOM 4 O LEU L 5 45.200 28.825 99.186 1.00 -1.00 \ ATOM 5 CB LEU L 5 46.545 30.920 100.441 1.00 -1.00 \ ATOM 6 CG LEU L 5 47.664 31.431 101.348 1.00 -1.00 \ ATOM 7 CD1 LEU L 5 47.124 31.625 102.752 1.00 -1.00 \ ATOM 8 CD2 LEU L 5 48.806 30.447 101.366 1.00 -1.00 \ ATOM 33 N LEU L 8 45.860 25.764 98.222 1.00 -1.00 \ ATOM 34 CA LEU L 8 45.790 24.923 99.412 1.00 -1.00 \ ATOM 35 C LEU L 8 44.459 24.132 99.298 1.00 -1.00 \ ATOM 36 O LEU L 8 44.288 23.089 99.925 1.00 -1.00 \ ATOM 37 CB LEU L 8 45.765 25.773 100.693 1.00 -1.00 \ ATOM 38 CG LEU L 8 47.035 26.349 101.338 1.00 -1.00 \ ATOM 39 CD1 LEU L 8 47.825 27.193 100.342 1.00 -1.00 \ ATOM 40 CD2 LEU L 8 46.633 27.171 102.560 1.00 -1.00 \ ATOM 41 N ARG L 9 43.524 24.645 98.491 1.00 -1.00 \ ATOM 42 CA ARG L 9 42.213 24.016 98.279 1.00 -1.00 \ ATOM 43 C ARG L 9 42.286 22.915 97.234 1.00 -1.00 \ ATOM 44 O ARG L 9 43.022 23.018 96.259 1.00 -1.00 \ ATOM 45 CB ARG L 9 41.194 25.032 97.760 1.00 -1.00 \ ATOM 46 CG ARG L 9 40.937 26.212 98.646 1.00 -1.00 \ ATOM 47 CD ARG L 9 40.151 27.293 97.895 1.00 -1.00 \ ATOM 48 NE ARG L 9 39.687 28.335 98.802 1.00 -1.00 \ ATOM 49 CZ ARG L 9 38.772 28.132 99.748 1.00 -1.00 \ ATOM 50 NH1 ARG L 9 38.399 29.123 100.554 1.00 -1.00 \ ATOM 51 NH2 ARG L 9 38.210 26.933 99.876 1.00 -1.00 \ ATOM 52 N PRO L 10 41.517 21.841 97.418 1.00 -0.07 \ ATOM 53 CA PRO L 10 41.568 20.778 96.410 1.00 -0.07 \ ATOM 54 C PRO L 10 41.004 21.310 95.077 1.00 -0.07 \ ATOM 55 O PRO L 10 40.182 22.223 95.059 1.00 -0.07 \ ATOM 56 CB PRO L 10 40.682 19.691 97.013 1.00 -0.07 \ ATOM 57 CG PRO L 10 40.799 19.922 98.493 1.00 -0.07 \ ATOM 58 CD PRO L 10 40.739 21.422 98.599 1.00 -0.07 \ ATOM 59 N GLY L 11 41.436 20.729 93.967 1.00 1.16 \ ATOM 60 CA GLY L 11 40.955 21.180 92.674 1.00 1.16 \ ATOM 61 C GLY L 11 39.444 21.185 92.483 1.00 1.16 \ ATOM 62 O GLY L 11 38.733 20.292 92.949 1.00 1.16 \ ATOM 63 N SER L 12 38.958 22.206 91.781 1.00 0.35 \ ATOM 64 CA SER L 12 37.537 22.358 91.484 1.00 0.35 \ ATOM 65 C SER L 12 37.396 22.922 90.077 1.00 0.35 \ ATOM 66 O SER L 12 37.784 24.061 89.817 1.00 0.35 \ ATOM 67 CB SER L 12 36.887 23.312 92.484 1.00 0.35 \ ATOM 68 OG SER L 12 35.735 23.925 91.928 1.00 0.35 \ ATOM 69 N LEU L 13 36.842 22.128 89.171 1.00 0.09 \ ATOM 70 CA LEU L 13 36.673 22.566 87.795 1.00 0.09 \ ATOM 71 C LEU L 13 35.829 23.824 87.652 1.00 0.09 \ ATOM 72 O LEU L 13 36.123 24.687 86.823 1.00 0.09 \ ATOM 73 CB LEU L 13 36.034 21.468 86.967 1.00 0.09 \ ATOM 74 CG LEU L 13 35.763 21.919 85.537 1.00 0.09 \ ATOM 75 CD1 LEU L 13 37.047 21.874 84.743 1.00 0.09 \ ATOM 76 CD2 LEU L 13 34.731 21.016 84.919 1.00 0.09 \ ATOM 89 N ARG L 15 35.147 26.378 89.948 1.00 0.52 \ ATOM 90 CA ARG L 15 35.874 27.513 90.472 1.00 0.52 \ ATOM 91 C ARG L 15 37.076 27.933 89.637 1.00 0.52 \ ATOM 92 O ARG L 15 37.342 29.130 89.480 1.00 0.52 \ ATOM 93 CB ARG L 15 36.340 27.181 91.899 1.00 0.52 \ ATOM 94 CG ARG L 15 37.051 28.313 92.640 1.00 0.52 \ ATOM 95 CD ARG L 15 37.566 27.814 93.989 1.00 0.52 \ ATOM 96 NE ARG L 15 38.722 26.930 93.837 1.00 0.52 \ ATOM 97 CZ ARG L 15 38.843 25.748 94.434 1.00 0.52 \ ATOM 98 NH1 ARG L 15 39.934 25.017 94.243 1.00 0.52 \ ATOM 99 NH2 ARG L 15 37.866 25.291 95.211 1.00 0.52 \ ATOM 112 N CYS L 17 38.036 26.479 86.204 1.00 1.16 \ ATOM 113 CA CYS L 17 37.957 26.503 84.738 1.00 1.16 \ ATOM 114 C CYS L 17 36.695 27.156 84.182 1.00 1.16 \ ATOM 115 O CYS L 17 36.708 27.696 83.082 1.00 1.16 \ ATOM 116 CB CYS L 17 38.070 25.100 84.160 1.00 1.16 \ ATOM 117 SG CYS L 17 39.613 24.215 84.518 1.00 1.16 \ ATOM 118 N LYS L 18 35.612 27.102 84.944 1.00 0.52 \ ATOM 119 CA LYS L 18 34.353 27.697 84.526 1.00 0.52 \ ATOM 120 C LYS L 18 34.313 29.156 84.986 1.00 0.52 \ ATOM 121 O LYS L 18 34.201 30.079 84.168 1.00 0.52 \ ATOM 122 CB LYS L 18 33.189 26.910 85.142 1.00 0.52 \ ATOM 123 CG LYS L 18 33.074 25.479 84.628 1.00 0.52 \ ATOM 124 CD LYS L 18 32.410 25.459 83.261 0.50 0.52 \ ATOM 125 CE LYS L 18 32.543 24.115 82.563 0.50 0.52 \ ATOM 126 NZ LYS L 18 33.877 23.950 81.961 0.50 0.52 \ ATOM 151 N GLN L 21 39.792 31.179 84.329 1.00 -1.30 \ ATOM 152 CA GLN L 21 40.529 30.554 83.247 1.00 -1.30 \ ATOM 153 C GLN L 21 41.588 29.700 83.931 1.00 -1.30 \ ATOM 154 O GLN L 21 42.356 30.175 84.767 1.00 -1.30 \ ATOM 155 CB GLN L 21 41.154 31.598 82.324 1.00 -1.30 \ ATOM 156 CG GLN L 21 40.226 31.965 81.162 0.50 -1.30 \ ATOM 157 CD GLN L 21 40.890 32.823 80.101 0.50 -1.30 \ ATOM 158 OE1 GLN L 21 41.147 34.006 80.312 0.50 -1.30 \ ATOM 159 NE2 GLN L 21 41.176 32.222 78.949 0.50 -1.30 \ ATOM 160 N CYS L 22 41.600 28.420 83.606 1.00 1.16 \ ATOM 161 CA CYS L 22 42.555 27.515 84.220 1.00 1.16 \ ATOM 162 C CYS L 22 43.628 27.101 83.231 1.00 1.16 \ ATOM 163 O CYS L 22 43.347 26.911 82.042 1.00 1.16 \ ATOM 164 CB CYS L 22 41.830 26.278 84.757 1.00 1.16 \ ATOM 165 SG CYS L 22 41.066 25.206 83.500 1.00 1.16 \ ATOM 166 N SER L 23 44.865 26.987 83.710 1.00 -0.64 \ ATOM 167 CA SER L 23 45.962 26.574 82.834 1.00 -0.64 \ ATOM 168 C SER L 23 45.868 25.051 82.678 1.00 -0.64 \ ATOM 169 O SER L 23 44.935 24.422 83.194 1.00 -0.64 \ ATOM 170 CB SER L 23 47.312 26.925 83.444 1.00 -0.64 \ ATOM 171 OG SER L 23 47.698 25.901 84.345 1.00 -0.64 \ ATOM 172 N PHE L 24 46.838 24.466 81.985 1.00 -0.91 \ ATOM 173 CA PHE L 24 46.831 23.031 81.768 1.00 -0.91 \ ATOM 174 C PHE L 24 47.117 22.263 83.051 1.00 -0.91 \ ATOM 175 O PHE L 24 46.519 21.209 83.291 1.00 -0.91 \ ATOM 176 CB PHE L 24 47.858 22.631 80.702 1.00 -0.91 \ ATOM 177 CG PHE L 24 47.810 21.169 80.346 1.00 -0.91 \ ATOM 178 CD1 PHE L 24 46.883 20.691 79.430 1.00 -0.91 \ ATOM 179 CD2 PHE L 24 48.674 20.265 80.945 1.00 -0.91 \ ATOM 180 CE1 PHE L 24 46.825 19.331 79.120 1.00 -0.91 \ ATOM 181 CE2 PHE L 24 48.619 18.917 80.639 1.00 -0.91 \ ATOM 182 CZ PHE L 24 47.699 18.449 79.730 1.00 -0.91 \ ATOM 207 N ALA L 27 44.181 22.132 85.290 1.00 0.52 \ ATOM 208 CA ALA L 27 43.250 21.189 84.681 1.00 0.52 \ ATOM 209 C ALA L 27 43.691 19.773 84.983 1.00 0.52 \ ATOM 210 O ALA L 27 42.877 18.929 85.347 1.00 0.52 \ ATOM 211 CB ALA L 27 43.186 21.397 83.182 1.00 0.52 \ ATOM 212 N ARG L 28 44.982 19.512 84.813 1.00 0.52 \ ATOM 213 CA ARG L 28 45.539 18.193 85.102 1.00 0.52 \ ATOM 214 C ARG L 28 45.371 17.908 86.603 1.00 0.52 \ ATOM 215 O ARG L 28 45.113 16.772 87.001 1.00 0.52 \ ATOM 216 CB ARG L 28 47.024 18.154 84.739 1.00 0.52 \ ATOM 217 CG ARG L 28 47.657 16.777 84.843 1.00 0.52 \ ATOM 218 CD ARG L 28 49.145 16.888 85.180 1.00 0.52 \ ATOM 219 NE ARG L 28 49.351 17.345 86.556 1.00 0.52 \ ATOM 220 CZ ARG L 28 49.034 16.639 87.644 1.00 0.52 \ ATOM 221 NH1 ARG L 28 49.253 17.149 88.853 1.00 0.52 \ ATOM 222 NH2 ARG L 28 48.504 15.421 87.528 1.00 0.52 \ ATOM 235 N ILE L 30 43.013 18.656 88.248 1.00 -0.16 \ ATOM 236 CA ILE L 30 41.609 18.353 88.448 1.00 -0.16 \ ATOM 237 C ILE L 30 41.287 16.935 87.981 1.00 -0.16 \ ATOM 238 O ILE L 30 40.781 16.129 88.761 1.00 -0.16 \ ATOM 239 CB ILE L 30 40.737 19.357 87.699 1.00 -0.16 \ ATOM 240 CG1 ILE L 30 40.486 20.569 88.594 1.00 -0.16 \ ATOM 241 CG2 ILE L 30 39.445 18.710 87.259 1.00 -0.16 \ ATOM 242 CD1 ILE L 30 39.747 21.689 87.909 1.00 -0.16 \ ATOM 243 N PHE L 31 41.605 16.619 86.724 1.00 -0.06 \ ATOM 244 CA PHE L 31 41.308 15.287 86.197 1.00 -0.06 \ ATOM 245 C PHE L 31 42.355 14.237 86.532 1.00 -0.06 \ ATOM 246 O PHE L 31 42.078 13.043 86.435 1.00 -0.06 \ ATOM 247 CB PHE L 31 41.102 15.324 84.679 1.00 -0.06 \ ATOM 248 CG PHE L 31 40.019 16.260 84.238 1.00 -0.06 \ ATOM 249 CD1 PHE L 31 40.313 17.558 83.883 1.00 -0.06 \ ATOM 250 CD2 PHE L 31 38.710 15.832 84.159 1.00 -0.06 \ ATOM 251 CE1 PHE L 31 39.330 18.415 83.451 1.00 -0.06 \ ATOM 252 CE2 PHE L 31 37.709 16.692 83.724 1.00 -0.06 \ ATOM 253 CZ PHE L 31 38.027 17.990 83.368 1.00 -0.06 \ ATOM 254 N LYS L 32 43.550 14.681 86.914 1.00 -0.03 \ ATOM 255 CA LYS L 32 44.636 13.770 87.284 1.00 -0.03 \ ATOM 256 C LYS L 32 45.163 12.877 86.152 1.00 -0.03 \ ATOM 257 O LYS L 32 46.371 12.834 85.893 1.00 -0.03 \ ATOM 258 CB LYS L 32 44.195 12.903 88.466 1.00 -0.03 \ ATOM 259 CG LYS L 32 43.991 13.679 89.762 1.00 -0.03 \ ATOM 260 CD LYS L 32 45.268 14.404 90.160 0.00 -0.03 \ ATOM 261 CE LYS L 32 45.098 15.166 91.464 0.00 -0.03 \ ATOM 262 NZ LYS L 32 44.784 14.259 92.601 0.00 -0.03 \ ATOM 263 N ASP L 33 44.266 12.158 85.487 1.00 -0.44 \ ATOM 264 CA ASP L 33 44.664 11.294 84.389 1.00 -0.44 \ ATOM 265 C ASP L 33 45.045 12.112 83.145 1.00 -0.44 \ ATOM 266 O ASP L 33 44.423 13.124 82.835 1.00 -0.44 \ ATOM 267 CB ASP L 33 43.534 10.322 84.067 1.00 -0.44 \ ATOM 268 CG ASP L 33 43.781 9.553 82.790 1.00 -0.44 \ ATOM 269 OD1 ASP L 33 43.182 9.920 81.752 1.00 -0.44 \ ATOM 270 OD2 ASP L 33 44.585 8.596 82.825 1.00 -0.44 \ ATOM 271 N ALA L 34 46.069 11.660 82.434 1.00 -1.75 \ ATOM 272 CA ALA L 34 46.566 12.357 81.251 1.00 -1.75 \ ATOM 273 C ALA L 34 45.621 12.361 80.055 1.00 -1.75 \ ATOM 274 O ALA L 34 45.410 13.396 79.407 1.00 -1.75 \ ATOM 275 CB ALA L 34 47.900 11.752 80.832 1.00 -1.75 \ ATOM 276 N GLU L 35 45.077 11.186 79.752 1.00 -1.33 \ ATOM 277 CA GLU L 35 44.180 11.024 78.625 1.00 -1.33 \ ATOM 278 C GLU L 35 42.875 11.762 78.898 1.00 -1.33 \ ATOM 279 O GLU L 35 42.196 12.184 77.967 1.00 -1.33 \ ATOM 280 CB GLU L 35 43.945 9.530 78.367 1.00 -1.33 \ ATOM 281 CG GLU L 35 43.479 9.209 76.957 0.50 -1.33 \ ATOM 282 CD GLU L 35 44.153 10.081 75.900 0.50 -1.33 \ ATOM 283 OE1 GLU L 35 43.500 11.030 75.412 0.50 -1.33 \ ATOM 284 OE2 GLU L 35 45.336 9.834 75.562 0.50 -1.33 \ ATOM 285 N ARG L 36 42.531 11.929 80.174 1.00 -1.60 \ ATOM 286 CA ARG L 36 41.307 12.640 80.539 1.00 -1.60 \ ATOM 287 C ARG L 36 41.539 14.148 80.449 1.00 -1.60 \ ATOM 288 O ARG L 36 40.676 14.890 79.986 1.00 -1.60 \ ATOM 289 CB ARG L 36 40.856 12.260 81.960 1.00 -1.60 \ ATOM 290 CG ARG L 36 40.413 10.814 82.104 1.00 -1.60 \ ATOM 291 CD ARG L 36 39.880 10.472 83.503 1.00 -1.60 \ ATOM 292 NE ARG L 36 39.479 9.059 83.596 1.00 -1.60 \ ATOM 293 CZ ARG L 36 39.123 8.441 84.721 0.50 -1.60 \ ATOM 294 NH1 ARG L 36 38.779 7.159 84.692 0.50 -1.60 \ ATOM 295 NH2 ARG L 36 39.112 9.099 85.874 0.50 -1.60 \ ATOM 296 N THR L 37 42.715 14.593 80.887 1.00 0.56 \ ATOM 297 CA THR L 37 43.062 16.008 80.851 1.00 0.56 \ ATOM 298 C THR L 37 43.172 16.488 79.410 1.00 0.56 \ ATOM 299 O THR L 37 42.781 17.612 79.102 1.00 0.56 \ ATOM 300 CB THR L 37 44.407 16.299 81.582 1.00 0.56 \ ATOM 301 OG1 THR L 37 44.358 15.779 82.919 1.00 0.56 \ ATOM 302 CG2 THR L 37 44.656 17.804 81.669 1.00 0.56 \ ATOM 303 N LYS L 38 43.699 15.642 78.526 1.00 -1.29 \ ATOM 304 CA LYS L 38 43.829 16.014 77.114 1.00 -1.29 \ ATOM 305 C LYS L 38 42.450 16.111 76.453 1.00 -1.29 \ ATOM 306 O LYS L 38 42.171 17.058 75.719 1.00 -1.29 \ ATOM 307 CB LYS L 38 44.716 15.010 76.367 1.00 -1.29 \ ATOM 308 CG LYS L 38 46.210 15.126 76.706 1.00 -1.29 \ ATOM 309 CD LYS L 38 47.064 14.067 75.989 1.00 -1.29 \ ATOM 310 CE LYS L 38 48.506 14.115 76.471 0.00 -1.29 \ ATOM 311 NZ LYS L 38 49.343 13.050 75.853 0.00 -1.29 \ ATOM 312 N LEU L 39 41.587 15.142 76.738 1.00 -1.34 \ ATOM 313 CA LEU L 39 40.238 15.139 76.194 1.00 -1.34 \ ATOM 314 C LEU L 39 39.527 16.435 76.570 1.00 -1.34 \ ATOM 315 O LEU L 39 38.834 17.033 75.742 1.00 -1.34 \ ATOM 316 CB LEU L 39 39.434 13.953 76.728 1.00 -1.34 \ ATOM 317 CG LEU L 39 38.075 13.910 76.043 1.00 -1.34 \ ATOM 318 CD1 LEU L 39 38.317 13.640 74.595 1.00 -1.34 \ ATOM 319 CD2 LEU L 39 37.175 12.843 76.639 1.00 -1.34 \ ATOM 320 N PHE L 40 39.688 16.859 77.824 1.00 1.16 \ ATOM 321 CA PHE L 40 39.086 18.106 78.299 1.00 1.16 \ ATOM 322 C PHE L 40 39.817 19.298 77.686 1.00 1.16 \ ATOM 323 O PHE L 40 39.197 20.226 77.175 1.00 1.16 \ ATOM 324 CB PHE L 40 39.191 18.229 79.829 1.00 1.16 \ ATOM 325 CG PHE L 40 38.996 19.646 80.347 1.00 1.16 \ ATOM 326 CD1 PHE L 40 37.721 20.152 80.593 1.00 1.16 \ ATOM 327 CD2 PHE L 40 40.085 20.475 80.570 1.00 1.16 \ ATOM 328 CE1 PHE L 40 37.540 21.460 81.056 1.00 1.16 \ ATOM 329 CE2 PHE L 40 39.909 21.780 81.030 1.00 1.16 \ ATOM 330 CZ PHE L 40 38.639 22.274 81.274 1.00 1.16 \ ATOM 331 N TRP L 41 41.141 19.260 77.713 1.00 1.16 \ ATOM 332 CA TRP L 41 41.914 20.392 77.220 1.00 1.16 \ ATOM 333 C TRP L 41 41.789 20.724 75.737 1.00 1.16 \ ATOM 334 O TRP L 41 41.859 21.885 75.344 1.00 1.16 \ ATOM 335 CB TRP L 41 43.384 20.219 77.602 1.00 1.16 \ ATOM 336 CG TRP L 41 44.157 21.470 77.452 1.00 1.16 \ ATOM 337 CD1 TRP L 41 45.034 21.773 76.456 1.00 1.16 \ ATOM 338 CD2 TRP L 41 44.112 22.617 78.312 1.00 1.16 \ ATOM 339 NE1 TRP L 41 45.541 23.034 76.639 1.00 1.16 \ ATOM 340 CE2 TRP L 41 44.993 23.575 77.772 1.00 1.16 \ ATOM 341 CE3 TRP L 41 43.415 22.924 79.488 1.00 1.16 \ ATOM 342 CZ2 TRP L 41 45.198 24.818 78.365 1.00 1.16 \ ATOM 343 CZ3 TRP L 41 43.622 24.161 80.082 1.00 1.16 \ ATOM 344 CH2 TRP L 41 44.507 25.092 79.515 1.00 1.16 \ ATOM 345 N ILE L 42 41.580 19.723 74.906 1.00 -1.34 \ ATOM 346 CA ILE L 42 41.479 19.995 73.490 1.00 -1.34 \ ATOM 347 C ILE L 42 40.334 20.980 73.152 1.00 -1.34 \ ATOM 348 O ILE L 42 40.476 21.847 72.274 1.00 -1.34 \ ATOM 349 CB ILE L 42 41.340 18.666 72.720 1.00 -1.34 \ ATOM 350 CG1 ILE L 42 41.594 18.904 71.232 1.00 -1.34 \ ATOM 351 CG2 ILE L 42 39.988 18.041 72.984 1.00 -1.34 \ ATOM 352 CD1 ILE L 42 41.890 17.618 70.480 1.00 -1.34 \ ATOM 353 N SER L 43 39.207 20.870 73.848 1.00 -1.06 \ ATOM 354 CA SER L 43 38.099 21.788 73.592 1.00 -1.06 \ ATOM 355 C SER L 43 38.238 23.055 74.419 1.00 -1.06 \ ATOM 356 O SER L 43 38.124 24.161 73.902 1.00 -1.06 \ ATOM 357 CB SER L 43 36.768 21.126 73.923 1.00 -1.06 \ ATOM 358 OG SER L 43 36.553 20.056 73.036 1.00 -1.06 \ ATOM 359 N TYR L 44 38.512 22.885 75.708 1.00 1.16 \ ATOM 360 CA TYR L 44 38.633 24.023 76.601 1.00 1.16 \ ATOM 361 C TYR L 44 39.575 25.064 76.062 1.00 1.16 \ ATOM 362 O TYR L 44 39.321 26.253 76.187 1.00 1.16 \ ATOM 363 CB TYR L 44 39.134 23.598 77.983 1.00 1.16 \ ATOM 364 CG TYR L 44 39.181 24.742 78.981 1.00 1.16 \ ATOM 365 CD1 TYR L 44 38.012 25.231 79.562 1.00 1.16 \ ATOM 366 CD2 TYR L 44 40.399 25.310 79.369 1.00 1.16 \ ATOM 367 CE1 TYR L 44 38.047 26.249 80.518 1.00 1.16 \ ATOM 368 CE2 TYR L 44 40.456 26.329 80.319 1.00 1.16 \ ATOM 369 CZ TYR L 44 39.274 26.792 80.898 1.00 1.16 \ ATOM 370 OH TYR L 44 39.319 27.755 81.891 1.00 1.16 \ """, "e1w0yL3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1w0yL3_csv", state=0, origin=1) cmd.zoom("e1w0yL3_csv", animate=-1)