cmd.read_pdbstr("""\ ATOM 1 N LEU L 5 47.569 31.728 98.002 1.00 -1.00 \ ATOM 2 CA LEU L 5 47.119 30.632 98.846 1.00 -1.00 \ ATOM 3 C LEU L 5 45.902 29.924 98.282 1.00 -1.00 \ ATOM 4 O LEU L 5 45.281 29.120 98.975 1.00 -1.00 \ ATOM 5 CB LEU L 5 46.785 31.132 100.249 1.00 -1.00 \ ATOM 6 CG LEU L 5 47.912 31.795 101.033 1.00 -1.00 \ ATOM 7 CD1 LEU L 5 47.397 32.177 102.410 1.00 -1.00 \ ATOM 8 CD2 LEU L 5 49.092 30.846 101.155 1.00 -1.00 \ ATOM 33 N LEU L 8 46.213 26.239 97.812 1.00 -1.00 \ ATOM 34 CA LEU L 8 46.114 25.444 99.033 1.00 -1.00 \ ATOM 35 C LEU L 8 44.786 24.686 98.963 1.00 -1.00 \ ATOM 36 O LEU L 8 44.645 23.594 99.515 1.00 -1.00 \ ATOM 37 CB LEU L 8 46.133 26.341 100.275 1.00 -1.00 \ ATOM 38 CG LEU L 8 47.495 26.664 100.893 1.00 -1.00 \ ATOM 39 CD1 LEU L 8 48.428 27.189 99.821 1.00 -1.00 \ ATOM 40 CD2 LEU L 8 47.323 27.677 102.018 1.00 -1.00 \ ATOM 41 N ARG L 9 43.815 25.282 98.275 1.00 -1.00 \ ATOM 42 CA ARG L 9 42.501 24.674 98.111 1.00 -1.00 \ ATOM 43 C ARG L 9 42.638 23.539 97.118 1.00 -1.00 \ ATOM 44 O ARG L 9 43.482 23.589 96.228 1.00 -1.00 \ ATOM 45 CB ARG L 9 41.511 25.679 97.533 1.00 -1.00 \ ATOM 46 CG ARG L 9 41.249 26.908 98.360 1.00 -1.00 \ ATOM 47 CD ARG L 9 40.474 27.903 97.515 1.00 -1.00 \ ATOM 48 NE ARG L 9 39.905 28.984 98.308 1.00 -1.00 \ ATOM 49 CZ ARG L 9 39.004 28.800 99.269 1.00 -1.00 \ ATOM 50 NH1 ARG L 9 38.529 29.836 99.952 1.00 -1.00 \ ATOM 51 NH2 ARG L 9 38.577 27.574 99.548 1.00 -1.00 \ ATOM 52 N PRO L 10 41.819 22.492 97.262 1.00 -0.07 \ ATOM 53 CA PRO L 10 41.885 21.361 96.333 1.00 -0.07 \ ATOM 54 C PRO L 10 41.421 21.785 94.938 1.00 -0.07 \ ATOM 55 O PRO L 10 40.884 22.875 94.764 1.00 -0.07 \ ATOM 56 CB PRO L 10 40.954 20.342 96.976 1.00 -0.07 \ ATOM 57 CG PRO L 10 41.128 20.619 98.428 1.00 -0.07 \ ATOM 58 CD PRO L 10 41.071 22.125 98.474 1.00 -0.07 \ ATOM 59 N GLY L 11 41.627 20.925 93.950 1.00 1.16 \ ATOM 60 CA GLY L 11 41.226 21.260 92.597 1.00 1.16 \ ATOM 61 C GLY L 11 39.727 21.393 92.407 1.00 1.16 \ ATOM 62 O GLY L 11 38.951 20.627 92.978 1.00 1.16 \ ATOM 63 N SER L 12 39.324 22.370 91.599 1.00 0.35 \ ATOM 64 CA SER L 12 37.916 22.622 91.310 1.00 0.35 \ ATOM 65 C SER L 12 37.771 23.035 89.852 1.00 0.35 \ ATOM 66 O SER L 12 38.141 24.150 89.486 1.00 0.35 \ ATOM 67 CB SER L 12 37.391 23.742 92.200 1.00 0.35 \ ATOM 68 OG SER L 12 36.124 24.184 91.752 1.00 0.35 \ ATOM 69 N LEU L 13 37.228 22.152 89.019 1.00 0.09 \ ATOM 70 CA LEU L 13 37.081 22.469 87.605 1.00 0.09 \ ATOM 71 C LEU L 13 36.312 23.755 87.374 1.00 0.09 \ ATOM 72 O LEU L 13 36.658 24.543 86.494 1.00 0.09 \ ATOM 73 CB LEU L 13 36.380 21.345 86.851 1.00 0.09 \ ATOM 74 CG LEU L 13 36.297 21.709 85.364 1.00 0.09 \ ATOM 75 CD1 LEU L 13 37.707 21.734 84.794 1.00 0.09 \ ATOM 76 CD2 LEU L 13 35.425 20.717 84.604 1.00 0.09 \ ATOM 89 N ARG L 15 35.639 26.520 89.635 1.00 0.52 \ ATOM 90 CA ARG L 15 36.333 27.701 90.117 1.00 0.52 \ ATOM 91 C ARG L 15 37.538 28.113 89.286 1.00 0.52 \ ATOM 92 O ARG L 15 37.727 29.298 89.013 1.00 0.52 \ ATOM 93 CB ARG L 15 36.790 27.494 91.562 1.00 0.52 \ ATOM 94 CG ARG L 15 37.521 28.708 92.139 1.00 0.52 \ ATOM 95 CD ARG L 15 38.092 28.466 93.539 1.00 0.52 \ ATOM 96 NE ARG L 15 39.165 27.477 93.540 1.00 0.52 \ ATOM 97 CZ ARG L 15 39.036 26.235 93.992 1.00 0.52 \ ATOM 98 NH1 ARG L 15 40.068 25.403 93.948 1.00 0.52 \ ATOM 99 NH2 ARG L 15 37.880 25.831 94.501 1.00 0.52 \ ATOM 112 N CYS L 17 38.642 26.681 85.967 1.00 1.16 \ ATOM 113 CA CYS L 17 38.550 26.708 84.505 1.00 1.16 \ ATOM 114 C CYS L 17 37.273 27.369 83.998 1.00 1.16 \ ATOM 115 O CYS L 17 37.270 28.006 82.943 1.00 1.16 \ ATOM 116 CB CYS L 17 38.636 25.297 83.929 1.00 1.16 \ ATOM 117 SG CYS L 17 40.155 24.378 84.323 1.00 1.16 \ ATOM 118 N LYS L 18 36.189 27.206 84.747 1.00 0.52 \ ATOM 119 CA LYS L 18 34.913 27.794 84.369 1.00 0.52 \ ATOM 120 C LYS L 18 34.863 29.241 84.845 1.00 0.52 \ ATOM 121 O LYS L 18 34.856 30.171 84.033 1.00 0.52 \ ATOM 122 CB LYS L 18 33.763 26.995 84.985 1.00 0.52 \ ATOM 123 CG LYS L 18 33.590 25.600 84.396 1.00 0.52 \ ATOM 124 CD LYS L 18 33.252 25.684 82.909 0.50 0.52 \ ATOM 125 CE LYS L 18 32.992 24.310 82.297 0.50 0.52 \ ATOM 126 NZ LYS L 18 34.194 23.428 82.306 0.50 0.52 \ ATOM 151 N GLN L 21 40.183 31.361 84.265 1.00 -1.30 \ ATOM 152 CA GLN L 21 40.870 30.732 83.142 1.00 -1.30 \ ATOM 153 C GLN L 21 41.995 29.917 83.752 1.00 -1.30 \ ATOM 154 O GLN L 21 42.873 30.462 84.417 1.00 -1.30 \ ATOM 155 CB GLN L 21 41.449 31.767 82.173 1.00 -1.30 \ ATOM 156 CG GLN L 21 40.588 32.011 80.942 0.50 -1.30 \ ATOM 157 CD GLN L 21 41.347 32.691 79.816 0.50 -1.30 \ ATOM 158 OE1 GLN L 21 41.854 33.801 79.973 0.50 -1.30 \ ATOM 159 NE2 GLN L 21 41.428 32.024 78.671 0.50 -1.30 \ ATOM 160 N CYS L 22 41.963 28.609 83.537 1.00 1.16 \ ATOM 161 CA CYS L 22 42.983 27.736 84.095 1.00 1.16 \ ATOM 162 C CYS L 22 44.026 27.354 83.057 1.00 1.16 \ ATOM 163 O CYS L 22 43.721 27.267 81.867 1.00 1.16 \ ATOM 164 CB CYS L 22 42.336 26.470 84.650 1.00 1.16 \ ATOM 165 SG CYS L 22 41.650 25.371 83.373 1.00 1.16 \ ATOM 166 N SER L 23 45.258 27.134 83.513 1.00 -0.64 \ ATOM 167 CA SER L 23 46.352 26.740 82.623 1.00 -0.64 \ ATOM 168 C SER L 23 46.244 25.240 82.377 1.00 -0.64 \ ATOM 169 O SER L 23 45.227 24.621 82.709 1.00 -0.64 \ ATOM 170 CB SER L 23 47.709 27.038 83.259 1.00 -0.64 \ ATOM 171 OG SER L 23 47.956 26.155 84.341 1.00 -0.64 \ ATOM 172 N PHE L 24 47.286 24.645 81.808 1.00 -0.91 \ ATOM 173 CA PHE L 24 47.233 23.214 81.548 1.00 -0.91 \ ATOM 174 C PHE L 24 47.418 22.409 82.832 1.00 -0.91 \ ATOM 175 O PHE L 24 46.634 21.499 83.127 1.00 -0.91 \ ATOM 176 CB PHE L 24 48.295 22.791 80.537 1.00 -0.91 \ ATOM 177 CG PHE L 24 48.158 21.366 80.101 1.00 -0.91 \ ATOM 178 CD1 PHE L 24 47.224 21.012 79.143 1.00 -0.91 \ ATOM 179 CD2 PHE L 24 48.925 20.372 80.683 1.00 -0.91 \ ATOM 180 CE1 PHE L 24 47.055 19.688 78.773 1.00 -0.91 \ ATOM 181 CE2 PHE L 24 48.763 19.045 80.320 1.00 -0.91 \ ATOM 182 CZ PHE L 24 47.827 18.699 79.364 1.00 -0.91 \ ATOM 207 N ALA L 27 44.639 22.443 85.166 1.00 0.52 \ ATOM 208 CA ALA L 27 43.688 21.490 84.621 1.00 0.52 \ ATOM 209 C ALA L 27 44.138 20.074 84.951 1.00 0.52 \ ATOM 210 O ALA L 27 43.355 19.272 85.446 1.00 0.52 \ ATOM 211 CB ALA L 27 43.573 21.668 83.123 1.00 0.52 \ ATOM 212 N ARG L 28 45.402 19.767 84.681 1.00 0.52 \ ATOM 213 CA ARG L 28 45.933 18.434 84.967 1.00 0.52 \ ATOM 214 C ARG L 28 45.823 18.160 86.466 1.00 0.52 \ ATOM 215 O ARG L 28 45.826 17.004 86.903 1.00 0.52 \ ATOM 216 CB ARG L 28 47.399 18.335 84.532 1.00 0.52 \ ATOM 217 CG ARG L 28 47.980 16.925 84.599 1.00 0.52 \ ATOM 218 CD ARG L 28 49.491 16.968 84.815 1.00 0.52 \ ATOM 219 NE ARG L 28 49.834 17.460 86.151 1.00 0.52 \ ATOM 220 CZ ARG L 28 49.743 16.736 87.263 1.00 0.52 \ ATOM 221 NH1 ARG L 28 50.065 17.270 88.433 1.00 0.52 \ ATOM 222 NH2 ARG L 28 49.348 15.471 87.204 1.00 0.52 \ ATOM 235 N ILE L 30 43.277 18.762 88.134 1.00 -0.16 \ ATOM 236 CA ILE L 30 41.887 18.439 88.396 1.00 -0.16 \ ATOM 237 C ILE L 30 41.624 17.015 87.935 1.00 -0.16 \ ATOM 238 O ILE L 30 41.233 16.159 88.728 1.00 -0.16 \ ATOM 239 CB ILE L 30 40.955 19.405 87.650 1.00 -0.16 \ ATOM 240 CG1 ILE L 30 41.123 20.813 88.222 1.00 -0.16 \ ATOM 241 CG2 ILE L 30 39.514 18.956 87.778 1.00 -0.16 \ ATOM 242 CD1 ILE L 30 40.268 21.850 87.547 1.00 -0.16 \ ATOM 243 N PHE L 31 41.860 16.758 86.654 1.00 -0.06 \ ATOM 244 CA PHE L 31 41.640 15.429 86.109 1.00 -0.06 \ ATOM 245 C PHE L 31 42.745 14.438 86.493 1.00 -0.06 \ ATOM 246 O PHE L 31 42.507 13.229 86.528 1.00 -0.06 \ ATOM 247 CB PHE L 31 41.515 15.490 84.583 1.00 -0.06 \ ATOM 248 CG PHE L 31 40.446 16.426 84.093 1.00 -0.06 \ ATOM 249 CD1 PHE L 31 40.774 17.696 83.642 1.00 -0.06 \ ATOM 250 CD2 PHE L 31 39.119 16.035 84.069 1.00 -0.06 \ ATOM 251 CE1 PHE L 31 39.797 18.560 83.172 1.00 -0.06 \ ATOM 252 CE2 PHE L 31 38.137 16.893 83.602 1.00 -0.06 \ ATOM 253 CZ PHE L 31 38.478 18.158 83.152 1.00 -0.06 \ ATOM 254 N LYS L 32 43.942 14.949 86.781 1.00 -0.03 \ ATOM 255 CA LYS L 32 45.083 14.107 87.157 1.00 -0.03 \ ATOM 256 C LYS L 32 45.632 13.310 85.972 1.00 -0.03 \ ATOM 257 O LYS L 32 46.789 13.475 85.585 1.00 -0.03 \ ATOM 258 CB LYS L 32 44.697 13.135 88.279 1.00 -0.03 \ ATOM 259 CG LYS L 32 44.352 13.802 89.600 1.00 -0.03 \ ATOM 260 CD LYS L 32 45.529 14.589 90.147 0.00 -0.03 \ ATOM 261 CE LYS L 32 45.178 15.261 91.465 0.00 -0.03 \ ATOM 262 NZ LYS L 32 44.795 14.270 92.508 0.00 -0.03 \ ATOM 263 N ASP L 33 44.805 12.439 85.405 1.00 -0.44 \ ATOM 264 CA ASP L 33 45.220 11.632 84.263 1.00 -0.44 \ ATOM 265 C ASP L 33 45.578 12.524 83.083 1.00 -0.44 \ ATOM 266 O ASP L 33 44.968 13.572 82.883 1.00 -0.44 \ ATOM 267 CB ASP L 33 44.098 10.683 83.848 1.00 -0.44 \ ATOM 268 CG ASP L 33 44.441 9.895 82.602 1.00 -0.44 \ ATOM 269 OD1 ASP L 33 43.693 9.996 81.604 1.00 -0.44 \ ATOM 270 OD2 ASP L 33 45.464 9.175 82.622 1.00 -0.44 \ ATOM 271 N ALA L 34 46.565 12.100 82.302 1.00 -1.75 \ ATOM 272 CA ALA L 34 47.005 12.864 81.141 1.00 -1.75 \ ATOM 273 C ALA L 34 46.015 12.745 79.986 1.00 -1.75 \ ATOM 274 O ALA L 34 45.612 13.748 79.384 1.00 -1.75 \ ATOM 275 CB ALA L 34 48.378 12.387 80.696 1.00 -1.75 \ ATOM 276 N GLU L 35 45.628 11.514 79.674 1.00 -1.33 \ ATOM 277 CA GLU L 35 44.690 11.277 78.592 1.00 -1.33 \ ATOM 278 C GLU L 35 43.407 12.061 78.846 1.00 -1.33 \ ATOM 279 O GLU L 35 42.818 12.621 77.923 1.00 -1.33 \ ATOM 280 CB GLU L 35 44.379 9.782 78.474 1.00 -1.33 \ ATOM 281 CG GLU L 35 43.584 9.428 77.235 0.50 -1.33 \ ATOM 282 CD GLU L 35 44.103 10.145 76.000 0.50 -1.33 \ ATOM 283 OE1 GLU L 35 43.826 11.355 75.852 0.50 -1.33 \ ATOM 284 OE2 GLU L 35 44.796 9.502 75.184 0.50 -1.33 \ ATOM 285 N ARG L 36 42.982 12.105 80.106 1.00 -1.60 \ ATOM 286 CA ARG L 36 41.769 12.825 80.470 1.00 -1.60 \ ATOM 287 C ARG L 36 41.990 14.327 80.330 1.00 -1.60 \ ATOM 288 O ARG L 36 41.207 15.022 79.683 1.00 -1.60 \ ATOM 289 CB ARG L 36 41.355 12.478 81.908 1.00 -1.60 \ ATOM 290 CG ARG L 36 40.941 11.016 82.105 1.00 -1.60 \ ATOM 291 CD ARG L 36 40.451 10.748 83.529 1.00 -1.60 \ ATOM 292 NE ARG L 36 40.035 9.359 83.728 1.00 -1.60 \ ATOM 293 CZ ARG L 36 39.545 8.878 84.868 0.50 -1.60 \ ATOM 294 NH1 ARG L 36 39.193 7.602 84.957 0.50 -1.60 \ ATOM 295 NH2 ARG L 36 39.403 9.669 85.922 0.50 -1.60 \ ATOM 296 N THR L 37 43.070 14.820 80.928 1.00 0.56 \ ATOM 297 CA THR L 37 43.402 16.239 80.874 1.00 0.56 \ ATOM 298 C THR L 37 43.516 16.726 79.431 1.00 0.56 \ ATOM 299 O THR L 37 43.143 17.863 79.129 1.00 0.56 \ ATOM 300 CB THR L 37 44.730 16.533 81.620 1.00 0.56 \ ATOM 301 OG1 THR L 37 44.614 16.122 82.989 1.00 0.56 \ ATOM 302 CG2 THR L 37 45.050 18.020 81.579 1.00 0.56 \ ATOM 303 N LYS L 38 44.021 15.867 78.543 1.00 -1.29 \ ATOM 304 CA LYS L 38 44.171 16.222 77.128 1.00 -1.29 \ ATOM 305 C LYS L 38 42.821 16.365 76.428 1.00 -1.29 \ ATOM 306 O LYS L 38 42.572 17.357 75.738 1.00 -1.29 \ ATOM 307 CB LYS L 38 45.016 15.177 76.395 1.00 -1.29 \ ATOM 308 CG LYS L 38 46.463 15.127 76.852 1.00 -1.29 \ ATOM 309 CD LYS L 38 47.294 14.201 75.972 1.00 -1.29 \ ATOM 310 CE LYS L 38 48.730 14.132 76.462 0.00 -1.29 \ ATOM 311 NZ LYS L 38 49.559 13.214 75.637 0.00 -1.29 \ ATOM 312 N LEU L 39 41.958 15.369 76.607 1.00 -1.34 \ ATOM 313 CA LEU L 39 40.630 15.386 76.012 1.00 -1.34 \ ATOM 314 C LEU L 39 39.950 16.702 76.366 1.00 -1.34 \ ATOM 315 O LEU L 39 39.329 17.340 75.516 1.00 -1.34 \ ATOM 316 CB LEU L 39 39.792 14.227 76.547 1.00 -1.34 \ ATOM 317 CG LEU L 39 38.410 14.114 75.910 1.00 -1.34 \ ATOM 318 CD1 LEU L 39 38.559 13.674 74.473 1.00 -1.34 \ ATOM 319 CD2 LEU L 39 37.566 13.126 76.677 1.00 -1.34 \ ATOM 320 N PHE L 40 40.065 17.100 77.631 1.00 1.16 \ ATOM 321 CA PHE L 40 39.476 18.351 78.099 1.00 1.16 \ ATOM 322 C PHE L 40 40.186 19.548 77.490 1.00 1.16 \ ATOM 323 O PHE L 40 39.554 20.434 76.919 1.00 1.16 \ ATOM 324 CB PHE L 40 39.580 18.469 79.624 1.00 1.16 \ ATOM 325 CG PHE L 40 39.338 19.865 80.138 1.00 1.16 \ ATOM 326 CD1 PHE L 40 38.051 20.352 80.297 1.00 1.16 \ ATOM 327 CD2 PHE L 40 40.400 20.706 80.424 1.00 1.16 \ ATOM 328 CE1 PHE L 40 37.831 21.658 80.732 1.00 1.16 \ ATOM 329 CE2 PHE L 40 40.181 22.009 80.857 1.00 1.16 \ ATOM 330 CZ PHE L 40 38.896 22.482 81.009 1.00 1.16 \ ATOM 331 N TRP L 41 41.508 19.566 77.618 1.00 1.16 \ ATOM 332 CA TRP L 41 42.297 20.679 77.122 1.00 1.16 \ ATOM 333 C TRP L 41 42.101 20.989 75.648 1.00 1.16 \ ATOM 334 O TRP L 41 41.945 22.149 75.266 1.00 1.16 \ ATOM 335 CB TRP L 41 43.786 20.452 77.412 1.00 1.16 \ ATOM 336 CG TRP L 41 44.563 21.710 77.249 1.00 1.16 \ ATOM 337 CD1 TRP L 41 45.353 22.055 76.196 1.00 1.16 \ ATOM 338 CD2 TRP L 41 44.520 22.856 78.111 1.00 1.16 \ ATOM 339 NE1 TRP L 41 45.801 23.347 76.341 1.00 1.16 \ ATOM 340 CE2 TRP L 41 45.303 23.860 77.510 1.00 1.16 \ ATOM 341 CE3 TRP L 41 43.890 23.131 79.331 1.00 1.16 \ ATOM 342 CZ2 TRP L 41 45.473 25.116 78.085 1.00 1.16 \ ATOM 343 CZ3 TRP L 41 44.059 24.380 79.899 1.00 1.16 \ ATOM 344 CH2 TRP L 41 44.844 25.355 79.276 1.00 1.16 \ ATOM 345 N ILE L 42 42.095 19.953 74.824 1.00 -1.34 \ ATOM 346 CA ILE L 42 41.934 20.131 73.389 1.00 -1.34 \ ATOM 347 C ILE L 42 40.853 21.155 72.997 1.00 -1.34 \ ATOM 348 O ILE L 42 41.081 22.012 72.141 1.00 -1.34 \ ATOM 349 CB ILE L 42 41.645 18.769 72.706 1.00 -1.34 \ ATOM 350 CG1 ILE L 42 41.835 18.898 71.195 1.00 -1.34 \ ATOM 351 CG2 ILE L 42 40.235 18.304 73.018 1.00 -1.34 \ ATOM 352 CD1 ILE L 42 41.620 17.602 70.452 1.00 -1.34 \ ATOM 353 N SER L 43 39.683 21.074 73.622 1.00 -1.06 \ ATOM 354 CA SER L 43 38.601 22.003 73.317 1.00 -1.06 \ ATOM 355 C SER L 43 38.744 23.297 74.105 1.00 -1.06 \ ATOM 356 O SER L 43 38.866 24.375 73.527 1.00 -1.06 \ ATOM 357 CB SER L 43 37.254 21.364 73.642 1.00 -1.06 \ ATOM 358 OG SER L 43 37.065 20.186 72.894 1.00 -1.06 \ ATOM 359 N TYR L 44 38.720 23.168 75.430 1.00 1.16 \ ATOM 360 CA TYR L 44 38.833 24.296 76.353 1.00 1.16 \ ATOM 361 C TYR L 44 39.789 25.374 75.876 1.00 1.16 \ ATOM 362 O TYR L 44 39.569 26.558 76.121 1.00 1.16 \ ATOM 363 CB TYR L 44 39.311 23.813 77.722 1.00 1.16 \ ATOM 364 CG TYR L 44 39.376 24.901 78.778 1.00 1.16 \ ATOM 365 CD1 TYR L 44 38.231 25.315 79.450 1.00 1.16 \ ATOM 366 CD2 TYR L 44 40.584 25.496 79.121 1.00 1.16 \ ATOM 367 CE1 TYR L 44 38.286 26.285 80.438 1.00 1.16 \ ATOM 368 CE2 TYR L 44 40.649 26.468 80.105 1.00 1.16 \ ATOM 369 CZ TYR L 44 39.496 26.855 80.761 1.00 1.16 \ ATOM 370 OH TYR L 44 39.554 27.808 81.752 1.00 1.16 \ """, "e1w2kL3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1w2kL3_csv", state=0, origin=1) cmd.zoom("e1w2kL3_csv", animate=-1)