cmd.read_pdbstr("""\ ATOM 1 N GLY A 89 35.735 10.181 31.989 1.00 -1.00 \ ATOM 2 CA GLY A 89 35.119 11.337 32.616 1.00 -1.00 \ ATOM 3 C GLY A 89 34.848 12.496 31.678 1.00 -1.00 \ ATOM 4 O GLY A 89 35.128 13.641 32.022 1.00 -1.00 \ ATOM 5 N SER A 90 34.304 12.218 30.498 1.00 -0.04 \ ATOM 6 CA SER A 90 34.027 13.288 29.558 1.00 -0.04 \ ATOM 7 C SER A 90 32.548 13.628 29.511 1.00 -0.04 \ ATOM 8 O SER A 90 31.707 12.878 30.019 1.00 -0.04 \ ATOM 9 CB SER A 90 34.511 12.921 28.155 1.00 -0.04 \ ATOM 10 OG SER A 90 33.721 11.900 27.575 1.00 -0.04 \ ATOM 11 N LYS A 91 32.253 14.770 28.891 1.00 1.13 \ ATOM 12 CA LYS A 91 30.895 15.275 28.750 1.00 1.13 \ ATOM 13 C LYS A 91 30.014 14.227 28.116 1.00 1.13 \ ATOM 14 O LYS A 91 28.985 13.856 28.670 1.00 1.13 \ ATOM 15 CB LYS A 91 30.892 16.539 27.883 1.00 1.13 \ ATOM 16 CG LYS A 91 30.271 17.768 28.548 1.00 1.13 \ ATOM 17 CD LYS A 91 30.999 18.157 29.832 1.00 1.13 \ ATOM 18 CE LYS A 91 30.313 19.310 30.558 1.00 1.13 \ ATOM 19 NZ LYS A 91 30.359 20.561 29.767 1.00 1.13 \ ATOM 20 N GLN A 92 30.425 13.756 26.945 1.00 0.01 \ ATOM 21 CA GLN A 92 29.680 12.738 26.214 1.00 0.01 \ ATOM 22 C GLN A 92 29.332 11.584 27.153 1.00 0.01 \ ATOM 23 O GLN A 92 28.188 11.150 27.226 1.00 0.01 \ ATOM 24 CB GLN A 92 30.515 12.218 25.039 1.00 0.01 \ ATOM 25 CG GLN A 92 31.043 13.305 24.072 1.00 0.01 \ ATOM 26 CD GLN A 92 32.147 14.207 24.671 1.00 0.01 \ ATOM 27 OE1 GLN A 92 33.205 13.733 25.105 1.00 0.01 \ ATOM 28 NE2 GLN A 92 31.899 15.514 24.677 1.00 0.01 \ ATOM 29 N GLU A 93 30.327 11.104 27.886 1.00 -0.74 \ ATOM 30 CA GLU A 93 30.123 10.010 28.819 1.00 -0.74 \ ATOM 31 C GLU A 93 29.224 10.418 29.980 1.00 -0.74 \ ATOM 32 O GLU A 93 28.399 9.629 30.422 1.00 -0.74 \ ATOM 33 CB GLU A 93 31.482 9.493 29.324 1.00 -0.74 \ ATOM 34 CG GLU A 93 32.286 8.758 28.238 1.00 -0.74 \ ATOM 35 CD GLU A 93 33.661 8.260 28.690 1.00 -0.74 \ ATOM 36 OE1 GLU A 93 34.554 9.089 28.988 1.00 -0.74 \ ATOM 37 OE2 GLU A 93 33.854 7.029 28.737 1.00 -0.74 \ ATOM 38 N LYS A 94 29.375 11.649 30.468 1.00 -0.07 \ ATOM 39 CA LYS A 94 28.558 12.139 31.579 1.00 -0.07 \ ATOM 40 C LYS A 94 27.068 12.057 31.283 1.00 -0.07 \ ATOM 41 O LYS A 94 26.285 11.655 32.146 1.00 -0.07 \ ATOM 42 CB LYS A 94 28.909 13.583 31.913 1.00 -0.07 \ ATOM 43 CG LYS A 94 30.268 13.763 32.535 1.00 -0.07 \ ATOM 44 CD LYS A 94 30.359 13.067 33.863 1.00 -0.07 \ ATOM 45 CE LYS A 94 31.740 13.232 34.460 1.00 -0.07 \ ATOM 46 NZ LYS A 94 31.873 12.474 35.742 1.00 -0.07 \ ATOM 47 N THR A 95 26.686 12.454 30.068 1.00 -0.73 \ ATOM 48 CA THR A 95 25.293 12.418 29.632 1.00 -0.73 \ ATOM 49 C THR A 95 24.744 10.993 29.578 1.00 -0.73 \ ATOM 50 O THR A 95 23.720 10.696 30.179 1.00 -0.73 \ ATOM 51 CB THR A 95 25.128 13.066 28.234 1.00 -0.73 \ ATOM 52 OG1 THR A 95 25.311 14.478 28.340 1.00 -0.73 \ ATOM 53 CG2 THR A 95 23.752 12.798 27.674 1.00 -0.73 \ ATOM 54 N ALA A 96 25.425 10.117 28.851 1.00 0.01 \ ATOM 55 CA ALA A 96 25.000 8.732 28.726 1.00 0.01 \ ATOM 56 C ALA A 96 24.832 8.094 30.084 1.00 0.01 \ ATOM 57 O ALA A 96 24.082 7.139 30.232 1.00 0.01 \ ATOM 58 CB ALA A 96 26.006 7.940 27.912 1.00 0.01 \ ATOM 59 N LEU A 97 25.521 8.621 31.086 1.00 1.13 \ ATOM 60 CA LEU A 97 25.423 8.049 32.421 1.00 1.13 \ ATOM 61 C LEU A 97 24.177 8.524 33.161 1.00 1.13 \ ATOM 62 O LEU A 97 23.453 7.727 33.764 1.00 1.13 \ ATOM 63 CB LEU A 97 26.662 8.389 33.248 1.00 1.13 \ ATOM 64 CG LEU A 97 26.742 7.515 34.499 1.00 1.13 \ ATOM 65 CD1 LEU A 97 27.703 6.379 34.234 1.00 1.13 \ ATOM 66 CD2 LEU A 97 27.159 8.342 35.709 1.00 1.13 \ ATOM 67 N ASN A 98 23.929 9.826 33.123 1.00 -0.01 \ ATOM 68 CA ASN A 98 22.766 10.374 33.798 1.00 -0.01 \ ATOM 69 C ASN A 98 21.466 9.930 33.129 1.00 -0.01 \ ATOM 70 O ASN A 98 20.430 9.822 33.785 1.00 -0.01 \ ATOM 71 CB ASN A 98 22.854 11.907 33.861 1.00 -0.01 \ ATOM 72 CG ASN A 98 23.100 12.547 32.498 1.00 -0.01 \ ATOM 73 OD1 ASN A 98 22.261 12.467 31.588 1.00 -0.01 \ ATOM 74 ND2 ASN A 98 24.257 13.192 32.354 1.00 -0.01 \ ATOM 75 N MET A 99 21.520 9.660 31.828 1.00 1.13 \ ATOM 76 CA MET A 99 20.320 9.227 31.125 1.00 1.13 \ ATOM 77 C MET A 99 20.039 7.812 31.578 1.00 1.13 \ ATOM 78 O MET A 99 18.887 7.426 31.760 1.00 1.13 \ ATOM 79 CB MET A 99 20.526 9.257 29.608 1.00 1.13 \ ATOM 80 CG MET A 99 19.220 9.222 28.800 1.00 1.13 \ ATOM 81 SD MET A 99 19.432 9.336 26.992 1.00 1.13 \ ATOM 82 CE MET A 99 20.453 10.805 26.854 1.00 1.13 \ ATOM 83 N ALA A 100 21.121 7.057 31.762 1.00 1.13 \ ATOM 84 CA ALA A 100 21.064 5.672 32.209 1.00 1.13 \ ATOM 85 C ALA A 100 20.425 5.630 33.588 1.00 1.13 \ ATOM 86 O ALA A 100 19.586 4.774 33.870 1.00 1.13 \ ATOM 87 CB ALA A 100 22.470 5.084 32.263 1.00 1.13 \ ATOM 88 N ARG A 101 20.831 6.562 34.443 1.00 -0.76 \ ATOM 89 CA ARG A 101 20.295 6.662 35.794 1.00 -0.76 \ ATOM 90 C ARG A 101 18.840 7.123 35.721 1.00 -0.76 \ ATOM 91 O ARG A 101 17.966 6.618 36.423 1.00 -0.76 \ ATOM 92 CB ARG A 101 21.142 7.654 36.608 1.00 -0.76 \ ATOM 93 CG ARG A 101 20.522 8.132 37.916 1.00 -0.76 \ ATOM 94 CD ARG A 101 21.564 8.778 38.821 1.00 -0.76 \ ATOM 95 NE ARG A 101 22.487 9.631 38.077 1.00 -0.76 \ ATOM 96 CZ ARG A 101 22.149 10.763 37.464 1.00 -0.76 \ ATOM 97 NH1 ARG A 101 20.892 11.197 37.507 1.00 -0.76 \ ATOM 98 NH2 ARG A 101 23.068 11.458 36.797 1.00 -0.76 \ ATOM 99 N PHE A 102 18.578 8.084 34.856 1.00 1.13 \ ATOM 100 CA PHE A 102 17.229 8.580 34.710 1.00 1.13 \ ATOM 101 C PHE A 102 16.278 7.421 34.397 1.00 1.13 \ ATOM 102 O PHE A 102 15.202 7.300 34.988 1.00 1.13 \ ATOM 103 CB PHE A 102 17.190 9.629 33.602 1.00 1.13 \ ATOM 104 CG PHE A 102 15.819 10.110 33.287 1.00 1.13 \ ATOM 105 CD1 PHE A 102 15.106 9.564 32.220 1.00 1.13 \ ATOM 106 CD2 PHE A 102 15.216 11.085 34.074 1.00 1.13 \ ATOM 107 CE1 PHE A 102 13.809 9.984 31.943 1.00 1.13 \ ATOM 108 CE2 PHE A 102 13.917 11.513 33.805 1.00 1.13 \ ATOM 109 CZ PHE A 102 13.213 10.961 32.738 1.00 1.13 \ ATOM 110 N ILE A 103 16.690 6.572 33.464 1.00 0.01 \ ATOM 111 CA ILE A 103 15.900 5.424 33.069 1.00 0.01 \ ATOM 112 C ILE A 103 15.655 4.515 34.258 1.00 0.01 \ ATOM 113 O ILE A 103 14.522 4.107 34.527 1.00 0.01 \ ATOM 114 CB ILE A 103 16.609 4.627 31.951 1.00 0.01 \ ATOM 115 CG1 ILE A 103 16.600 5.439 30.648 1.00 0.01 \ ATOM 116 CG2 ILE A 103 15.921 3.275 31.740 1.00 0.01 \ ATOM 117 CD1 ILE A 103 15.212 5.851 30.190 1.00 0.01 \ ATOM 118 N ARG A 104 16.724 4.201 34.974 1.00 -0.79 \ ATOM 119 CA ARG A 104 16.621 3.338 36.138 1.00 -0.79 \ ATOM 120 C ARG A 104 15.507 3.846 37.053 1.00 -0.79 \ ATOM 121 O ARG A 104 14.692 3.067 37.545 1.00 -0.79 \ ATOM 122 CB ARG A 104 17.964 3.294 36.876 1.00 -0.79 \ ATOM 123 CG ARG A 104 18.067 2.209 37.941 1.00 -0.79 \ ATOM 124 CD ARG A 104 19.525 1.895 38.279 1.00 -0.79 \ ATOM 125 NE ARG A 104 19.934 2.293 39.628 1.00 -0.79 \ ATOM 126 CZ ARG A 104 19.859 3.532 40.108 1.00 -0.79 \ ATOM 127 NH1 ARG A 104 19.384 4.521 39.356 1.00 -0.79 \ ATOM 128 NH2 ARG A 104 20.265 3.786 41.345 1.00 -0.79 \ ATOM 129 N SER A 105 15.456 5.157 37.258 1.00 -1.22 \ ATOM 130 CA SER A 105 14.433 5.747 38.119 1.00 -1.22 \ ATOM 131 C SER A 105 13.039 5.624 37.532 1.00 -1.22 \ ATOM 132 O SER A 105 12.091 5.243 38.224 1.00 -1.22 \ ATOM 133 CB SER A 105 14.746 7.216 38.375 1.00 -1.22 \ ATOM 134 OG SER A 105 15.964 7.338 39.090 1.00 -1.22 \ ATOM 135 N GLN A 106 12.918 5.943 36.251 1.00 1.13 \ ATOM 136 CA GLN A 106 11.634 5.862 35.590 1.00 1.13 \ ATOM 137 C GLN A 106 11.081 4.436 35.595 1.00 1.13 \ ATOM 138 O GLN A 106 9.865 4.240 35.637 1.00 1.13 \ ATOM 139 CB GLN A 106 11.742 6.405 34.162 1.00 1.13 \ ATOM 140 CG GLN A 106 10.755 7.534 33.884 1.00 1.13 \ ATOM 141 CD GLN A 106 10.926 8.702 34.848 1.00 1.13 \ ATOM 142 OE1 GLN A 106 11.047 8.518 36.066 1.00 1.13 \ ATOM 143 NE2 GLN A 106 10.927 9.914 34.306 1.00 1.13 \ ATOM 144 N THR A 107 11.969 3.444 35.563 1.00 -0.07 \ ATOM 145 CA THR A 107 11.540 2.049 35.586 1.00 -0.07 \ ATOM 146 C THR A 107 11.176 1.646 37.003 1.00 -0.07 \ ATOM 147 O THR A 107 10.440 0.690 37.211 1.00 -0.07 \ ATOM 148 CB THR A 107 12.638 1.090 35.081 1.00 -0.07 \ ATOM 149 OG1 THR A 107 13.891 1.448 35.665 1.00 -0.07 \ ATOM 150 CG2 THR A 107 12.748 1.139 33.580 1.00 -0.07 \ ATOM 151 N LEU A 108 11.696 2.372 37.984 1.00 1.13 \ ATOM 152 CA LEU A 108 11.390 2.063 39.376 1.00 1.13 \ ATOM 153 C LEU A 108 9.965 2.497 39.695 1.00 1.13 \ ATOM 154 O LEU A 108 9.158 1.727 40.222 1.00 1.13 \ ATOM 155 CB LEU A 108 12.366 2.778 40.320 1.00 1.13 \ ATOM 156 CG LEU A 108 12.205 2.487 41.821 1.00 1.13 \ ATOM 157 CD1 LEU A 108 12.169 0.993 42.077 1.00 1.13 \ ATOM 158 CD2 LEU A 108 13.345 3.124 42.588 1.00 1.13 \ ATOM 159 N THR A 109 9.660 3.742 39.363 1.00 -1.26 \ ATOM 160 CA THR A 109 8.339 4.270 39.622 1.00 -1.26 \ ATOM 161 C THR A 109 7.293 3.557 38.788 1.00 -1.26 \ ATOM 162 O THR A 109 6.143 3.440 39.214 1.00 -1.26 \ ATOM 163 CB THR A 109 8.289 5.784 39.353 1.00 -1.26 \ ATOM 164 OG1 THR A 109 9.153 6.101 38.256 1.00 -1.26 \ ATOM 165 CG2 THR A 109 8.726 6.554 40.602 1.00 -1.26 \ ATOM 166 N LEU A 110 7.686 3.073 37.610 1.00 1.13 \ ATOM 167 CA LEU A 110 6.748 2.361 36.751 1.00 1.13 \ ATOM 168 C LEU A 110 6.309 1.118 37.481 1.00 1.13 \ ATOM 169 O LEU A 110 5.115 0.848 37.612 1.00 1.13 \ ATOM 170 CB LEU A 110 7.399 1.960 35.432 1.00 1.13 \ ATOM 171 CG LEU A 110 6.475 1.235 34.436 1.00 1.13 \ ATOM 172 CD1 LEU A 110 5.186 2.042 34.230 1.00 1.13 \ ATOM 173 CD2 LEU A 110 7.212 1.022 33.110 1.00 1.13 \ ATOM 174 N LEU A 111 7.303 0.375 37.957 1.00 1.13 \ ATOM 175 CA LEU A 111 7.099 -0.854 38.709 1.00 1.13 \ ATOM 176 C LEU A 111 6.167 -0.574 39.891 1.00 1.13 \ ATOM 177 O LEU A 111 5.256 -1.354 40.182 1.00 1.13 \ ATOM 178 CB LEU A 111 8.449 -1.372 39.211 1.00 1.13 \ ATOM 179 CG LEU A 111 8.503 -2.715 39.935 1.00 1.13 \ ATOM 180 CD1 LEU A 111 8.394 -3.835 38.932 1.00 1.13 \ ATOM 181 CD2 LEU A 111 9.803 -2.830 40.689 1.00 1.13 \ ATOM 182 N GLU A 112 6.398 0.544 40.569 1.00 -0.01 \ ATOM 183 CA GLU A 112 5.553 0.916 41.696 1.00 -0.01 \ ATOM 184 C GLU A 112 4.108 1.083 41.236 1.00 -0.01 \ ATOM 185 O GLU A 112 3.206 0.411 41.737 1.00 -0.01 \ ATOM 186 CB GLU A 112 6.032 2.223 42.328 1.00 -0.01 \ ATOM 187 CG GLU A 112 6.953 2.046 43.510 1.00 -0.01 \ ATOM 188 CD GLU A 112 8.150 2.985 43.462 1.00 -0.01 \ ATOM 189 OE1 GLU A 112 7.963 4.186 43.173 1.00 -0.01 \ ATOM 190 OE2 GLU A 112 9.280 2.524 43.717 1.00 -0.01 \ ATOM 191 N LYS A 113 3.890 1.971 40.275 1.00 1.13 \ ATOM 192 CA LYS A 113 2.543 2.201 39.795 1.00 1.13 \ ATOM 193 C LYS A 113 1.876 0.933 39.263 1.00 1.13 \ ATOM 194 O LYS A 113 0.646 0.817 39.285 1.00 1.13 \ ATOM 195 CB LYS A 113 2.546 3.321 38.756 1.00 1.13 \ ATOM 196 CG LYS A 113 3.108 4.594 39.353 1.00 1.13 \ ATOM 197 CD LYS A 113 2.545 5.848 38.729 1.00 1.13 \ ATOM 198 CE LYS A 113 3.038 7.095 39.486 1.00 1.13 \ ATOM 199 NZ LYS A 113 2.779 7.071 40.972 1.00 1.13 \ ATOM 200 N LEU A 114 2.674 -0.028 38.809 1.00 1.13 \ ATOM 201 CA LEU A 114 2.099 -1.265 38.319 1.00 1.13 \ ATOM 202 C LEU A 114 1.660 -2.163 39.475 1.00 1.13 \ ATOM 203 O LEU A 114 0.600 -2.792 39.413 1.00 1.13 \ ATOM 204 CB LEU A 114 3.089 -2.007 37.424 1.00 1.13 \ ATOM 205 CG LEU A 114 3.160 -1.491 35.985 1.00 1.13 \ ATOM 206 CD1 LEU A 114 3.916 -2.494 35.129 1.00 1.13 \ ATOM 207 CD2 LEU A 114 1.760 -1.287 35.428 1.00 1.13 \ ATOM 208 N ASN A 115 2.473 -2.221 40.527 1.00 -0.07 \ ATOM 209 CA ASN A 115 2.152 -3.034 41.699 1.00 -0.07 \ ATOM 210 C ASN A 115 0.911 -2.495 42.402 1.00 -0.07 \ ATOM 211 O ASN A 115 0.010 -3.247 42.777 1.00 -0.07 \ ATOM 212 CB ASN A 115 3.323 -3.038 42.686 1.00 -0.07 \ ATOM 213 CG ASN A 115 4.393 -4.053 42.325 1.00 -0.07 \ ATOM 214 OD1 ASN A 115 4.099 -5.222 42.108 1.00 -0.07 \ ATOM 215 ND2 ASN A 115 5.644 -3.611 42.276 1.00 -0.07 \ ATOM 216 N GLU A 116 0.876 -1.184 42.588 1.00 -0.73 \ ATOM 217 CA GLU A 116 -0.253 -0.541 43.235 1.00 -0.73 \ ATOM 218 C GLU A 116 -1.504 -0.747 42.373 1.00 -0.73 \ ATOM 219 O GLU A 116 -2.617 -0.402 42.785 1.00 -0.73 \ ATOM 220 CB GLU A 116 0.033 0.957 43.429 1.00 -0.73 \ ATOM 221 CG GLU A 116 0.993 1.331 44.603 1.00 -0.73 \ ATOM 222 CD GLU A 116 2.440 0.799 44.474 1.00 -0.73 \ ATOM 223 OE1 GLU A 116 2.715 -0.362 44.859 1.00 -0.73 \ ATOM 224 OE2 GLU A 116 3.314 1.550 43.991 1.00 -0.73 \ ATOM 225 N LEU A 117 -1.314 -1.321 41.181 1.00 1.13 \ ATOM 226 CA LEU A 117 -2.416 -1.591 40.249 1.00 1.13 \ ATOM 227 C LEU A 117 -2.830 -3.057 40.204 1.00 1.13 \ ATOM 228 O LEU A 117 -3.954 -3.372 39.820 1.00 1.13 \ ATOM 229 CB LEU A 117 -2.057 -1.145 38.831 1.00 1.13 \ ATOM 230 CG LEU A 117 -2.121 0.350 38.525 1.00 1.13 \ ATOM 231 CD1 LEU A 117 -1.718 0.573 37.077 1.00 1.13 \ ATOM 232 CD2 LEU A 117 -3.522 0.880 38.788 1.00 1.13 \ ATOM 233 N ALA A 118 -1.920 -3.948 40.586 1.00 -0.68 \ ATOM 234 CA ALA A 118 -2.203 -5.380 40.602 1.00 -0.68 \ ATOM 235 C ALA A 118 -3.034 -5.734 41.839 1.00 -0.68 \ ATOM 236 O ALA A 118 -3.682 -6.785 41.886 1.00 -0.68 \ ATOM 237 CB ALA A 118 -0.899 -6.172 40.593 1.00 -0.68 \ ATOM 238 N LYS A 119 -2.993 -4.857 42.840 1.00 -1.65 \ ATOM 239 CA LYS A 119 -3.760 -5.040 44.073 1.00 -1.65 \ ATOM 240 C LYS A 119 -5.038 -4.216 43.925 1.00 -1.65 \ ATOM 241 O LYS A 119 -5.493 -3.566 44.874 1.00 -1.65 \ ATOM 242 CB LYS A 119 -2.975 -4.533 45.296 1.00 -1.65 \ ATOM 243 CG LYS A 119 -1.997 -5.521 45.915 1.00 -1.65 \ ATOM 244 CD LYS A 119 -1.021 -4.793 46.836 1.00 -1.65 \ ATOM 245 CE LYS A 119 -0.018 -5.747 47.486 1.00 -1.65 \ ATOM 246 NZ LYS A 119 0.806 -6.516 46.506 1.00 -1.65 \ ATOM 247 N GLY A 120 -5.607 -4.248 42.725 1.00 0.05 \ ATOM 248 CA GLY A 120 -6.812 -3.492 42.445 1.00 0.05 \ ATOM 249 C GLY A 120 -6.433 -2.067 42.089 1.00 0.05 \ ATOM 250 O GLY A 120 -6.283 -1.771 40.876 1.00 0.05 \ ATOM 251 OXT GLY A 120 -6.254 -1.251 43.026 1.00 0.05 \ """, "e1yo7A3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e1yo7A3_csv", state=0, origin=1) cmd.zoom("e1yo7A3_csv", animate=-1)