cmd.read_pdbstr("""\ ATOM 1 N LEU L 5 46.574 31.531 99.507 1.00 -1.00 \ ATOM 2 CA LEU L 5 45.510 31.187 100.453 1.00 -1.00 \ ATOM 3 C LEU L 5 44.374 30.390 99.786 1.00 -1.00 \ ATOM 4 O LEU L 5 43.615 29.682 100.457 1.00 -1.00 \ ATOM 5 CB LEU L 5 44.975 32.444 101.146 1.00 -1.00 \ ATOM 6 CG LEU L 5 45.031 32.559 102.677 1.00 -1.00 \ ATOM 7 CD1 LEU L 5 46.245 31.882 103.285 1.00 -1.00 \ ATOM 8 CD2 LEU L 5 44.983 34.026 103.080 1.00 -1.00 \ ATOM 33 N LEU L 8 44.847 26.134 99.641 1.00 -1.00 \ ATOM 34 CA LEU L 8 44.772 25.273 100.819 1.00 -1.00 \ ATOM 35 C LEU L 8 43.805 24.094 100.676 1.00 -1.00 \ ATOM 36 O LEU L 8 43.982 23.026 101.296 1.00 -1.00 \ ATOM 37 CB LEU L 8 44.427 26.125 102.051 1.00 -1.00 \ ATOM 38 CG LEU L 8 45.638 26.725 102.780 1.00 -1.00 \ ATOM 39 CD1 LEU L 8 46.577 27.435 101.827 1.00 -1.00 \ ATOM 40 CD2 LEU L 8 45.181 27.649 103.882 1.00 -1.00 \ ATOM 41 N ARG L 9 42.818 24.291 99.812 1.00 -1.00 \ ATOM 42 CA ARG L 9 41.761 23.318 99.543 1.00 -1.00 \ ATOM 43 C ARG L 9 42.211 22.115 98.696 1.00 -1.00 \ ATOM 44 O ARG L 9 43.319 22.104 98.129 1.00 -1.00 \ ATOM 45 CB ARG L 9 40.602 24.051 98.868 1.00 -1.00 \ ATOM 46 CG ARG L 9 40.332 25.394 99.529 1.00 -1.00 \ ATOM 47 CD ARG L 9 39.533 26.349 98.674 1.00 -1.00 \ ATOM 48 NE ARG L 9 39.615 27.696 99.229 1.00 -1.00 \ ATOM 49 CZ ARG L 9 38.732 28.665 99.014 1.00 -1.00 \ ATOM 50 NH1 ARG L 9 37.669 28.451 98.238 1.00 -1.00 \ ATOM 51 NH2 ARG L 9 38.915 29.857 99.583 1.00 -1.00 \ ATOM 52 N PRO L 10 41.406 21.031 98.699 1.00 -0.04 \ ATOM 53 CA PRO L 10 41.797 19.867 97.898 1.00 -0.04 \ ATOM 54 C PRO L 10 41.508 20.193 96.430 1.00 -0.04 \ ATOM 55 O PRO L 10 40.891 21.222 96.135 1.00 -0.04 \ ATOM 56 CB PRO L 10 40.881 18.763 98.434 1.00 -0.04 \ ATOM 57 CG PRO L 10 40.546 19.238 99.837 1.00 -0.04 \ ATOM 58 CD PRO L 10 40.297 20.696 99.603 1.00 -0.04 \ ATOM 59 N GLY L 11 41.998 19.360 95.514 1.00 1.21 \ ATOM 60 CA GLY L 11 41.769 19.623 94.099 1.00 1.21 \ ATOM 61 C GLY L 11 40.297 19.680 93.726 1.00 1.21 \ ATOM 62 O GLY L 11 39.489 18.949 94.301 1.00 1.21 \ ATOM 63 N SER L 12 39.952 20.552 92.780 1.00 0.38 \ ATOM 64 CA SER L 12 38.571 20.695 92.323 1.00 0.38 \ ATOM 65 C SER L 12 38.489 21.196 90.884 1.00 0.38 \ ATOM 66 O SER L 12 38.888 22.317 90.582 1.00 0.38 \ ATOM 67 CB SER L 12 37.789 21.629 93.243 1.00 0.38 \ ATOM 68 OG SER L 12 36.559 22.041 92.665 1.00 0.38 \ ATOM 69 N LEU L 13 37.963 20.354 89.999 1.00 0.13 \ ATOM 70 CA LEU L 13 37.816 20.723 88.595 1.00 0.13 \ ATOM 71 C LEU L 13 37.059 22.043 88.479 1.00 0.13 \ ATOM 72 O LEU L 13 37.501 22.950 87.779 1.00 0.13 \ ATOM 73 CB LEU L 13 37.091 19.616 87.818 1.00 0.13 \ ATOM 74 CG LEU L 13 36.916 19.844 86.312 1.00 0.13 \ ATOM 75 CD1 LEU L 13 38.265 19.705 85.621 1.00 0.13 \ ATOM 76 CD2 LEU L 13 35.906 18.849 85.753 1.00 0.13 \ ATOM 89 N ARG L 15 36.660 24.531 90.706 1.00 0.56 \ ATOM 90 CA ARG L 15 37.472 25.623 91.214 1.00 0.56 \ ATOM 91 C ARG L 15 38.650 25.976 90.303 1.00 0.56 \ ATOM 92 O ARG L 15 38.780 27.113 89.849 1.00 0.56 \ ATOM 93 CB ARG L 15 37.996 25.292 92.620 1.00 0.56 \ ATOM 94 CG ARG L 15 36.914 25.103 93.684 1.00 0.56 \ ATOM 95 CD ARG L 15 37.502 25.065 95.109 1.00 0.56 \ ATOM 96 NE ARG L 15 38.174 23.812 95.474 1.00 0.56 \ ATOM 97 CZ ARG L 15 37.652 22.873 96.271 1.00 0.56 \ ATOM 98 NH1 ARG L 15 36.441 23.027 96.791 1.00 0.56 \ ATOM 99 NH2 ARG L 15 38.354 21.793 96.587 1.00 0.56 \ ATOM 112 N CYS L 17 39.661 24.583 87.049 1.00 1.21 \ ATOM 113 CA CYS L 17 39.492 24.609 85.589 1.00 1.21 \ ATOM 114 C CYS L 17 38.216 25.249 85.066 1.00 1.21 \ ATOM 115 O CYS L 17 38.197 25.789 83.955 1.00 1.21 \ ATOM 116 CB CYS L 17 39.530 23.201 85.035 1.00 1.21 \ ATOM 117 SG CYS L 17 41.019 22.269 85.466 1.00 1.21 \ ATOM 118 N LYS L 18 37.135 25.142 85.824 1.00 0.56 \ ATOM 119 CA LYS L 18 35.866 25.702 85.378 1.00 0.56 \ ATOM 120 C LYS L 18 35.701 27.169 85.739 1.00 0.56 \ ATOM 121 O LYS L 18 35.181 27.946 84.945 1.00 0.56 \ ATOM 122 CB LYS L 18 34.701 24.862 85.911 1.00 0.56 \ ATOM 123 CG LYS L 18 34.698 23.416 85.406 1.00 0.56 \ ATOM 124 CD LYS L 18 34.219 23.320 83.954 1.00 0.56 \ ATOM 125 CE LYS L 18 35.176 22.527 83.083 1.00 0.56 \ ATOM 126 NZ LYS L 18 34.671 22.359 81.677 1.00 0.56 \ ATOM 151 N GLN L 21 41.411 29.116 84.909 1.00 -1.30 \ ATOM 152 CA GLN L 21 41.994 28.352 83.802 1.00 -1.30 \ ATOM 153 C GLN L 21 43.131 27.492 84.357 1.00 -1.30 \ ATOM 154 O GLN L 21 44.118 28.017 84.898 1.00 -1.30 \ ATOM 155 CB GLN L 21 42.545 29.272 82.706 1.00 -1.30 \ ATOM 156 CG GLN L 21 41.497 30.096 81.967 1.00 -1.30 \ ATOM 157 CD GLN L 21 42.092 30.975 80.859 1.00 -1.30 \ ATOM 158 OE1 GLN L 21 41.759 30.818 79.679 1.00 -1.30 \ ATOM 159 NE2 GLN L 21 42.968 31.906 81.238 1.00 -1.30 \ ATOM 160 N CYS L 22 43.034 26.184 84.186 1.00 1.21 \ ATOM 161 CA CYS L 22 44.062 25.301 84.709 1.00 1.21 \ ATOM 162 C CYS L 22 45.055 24.808 83.658 1.00 1.21 \ ATOM 163 O CYS L 22 44.780 24.836 82.454 1.00 1.21 \ ATOM 164 CB CYS L 22 43.413 24.109 85.396 1.00 1.21 \ ATOM 165 SG CYS L 22 42.451 23.074 84.272 1.00 1.21 \ ATOM 166 N SER L 23 46.207 24.340 84.120 1.00 -0.62 \ ATOM 167 CA SER L 23 47.239 23.822 83.226 1.00 -0.62 \ ATOM 168 C SER L 23 46.981 22.330 83.016 1.00 -0.62 \ ATOM 169 O SER L 23 46.192 21.712 83.752 1.00 -0.62 \ ATOM 170 CB SER L 23 48.624 24.004 83.867 1.00 -0.62 \ ATOM 171 OG SER L 23 48.846 23.047 84.907 1.00 -0.62 \ ATOM 172 N PHE L 24 47.653 21.743 82.028 1.00 -0.91 \ ATOM 173 CA PHE L 24 47.491 20.322 81.775 1.00 -0.91 \ ATOM 174 C PHE L 24 47.753 19.528 83.061 1.00 -0.91 \ ATOM 175 O PHE L 24 46.926 18.698 83.422 1.00 -0.91 \ ATOM 176 CB PHE L 24 48.419 19.822 80.665 1.00 -0.91 \ ATOM 177 CG PHE L 24 48.297 18.352 80.416 1.00 -0.91 \ ATOM 178 CD1 PHE L 24 47.365 17.866 79.509 1.00 -0.91 \ ATOM 179 CD2 PHE L 24 49.075 17.440 81.136 1.00 -0.91 \ ATOM 180 CE1 PHE L 24 47.201 16.494 79.323 1.00 -0.91 \ ATOM 181 CE2 PHE L 24 48.916 16.067 80.954 1.00 -0.91 \ ATOM 182 CZ PHE L 24 47.978 15.592 80.048 1.00 -0.91 \ ATOM 207 N ALA L 27 45.066 19.667 85.681 1.00 0.56 \ ATOM 208 CA ALA L 27 44.004 18.816 85.177 1.00 0.56 \ ATOM 209 C ALA L 27 44.395 17.356 85.349 1.00 0.56 \ ATOM 210 O ALA L 27 43.588 16.540 85.811 1.00 0.56 \ ATOM 211 CB ALA L 27 43.727 19.122 83.717 1.00 0.56 \ ATOM 212 N ARG L 28 45.651 17.041 85.050 1.00 0.56 \ ATOM 213 CA ARG L 28 46.131 15.678 85.178 1.00 0.56 \ ATOM 214 C ARG L 28 46.046 15.255 86.631 1.00 0.56 \ ATOM 215 O ARG L 28 45.650 14.136 86.925 1.00 0.56 \ ATOM 216 CB ARG L 28 47.571 15.555 84.704 1.00 0.56 \ ATOM 217 CG ARG L 28 47.995 14.121 84.417 1.00 0.56 \ ATOM 218 CD ARG L 28 49.279 13.746 85.149 1.00 0.56 \ ATOM 219 NE ARG L 28 49.005 13.010 86.383 1.00 0.56 \ ATOM 220 CZ ARG L 28 49.798 13.011 87.453 1.00 0.56 \ ATOM 221 NH1 ARG L 28 50.925 13.709 87.450 1.00 0.56 \ ATOM 222 NH2 ARG L 28 49.460 12.310 88.532 1.00 0.56 \ ATOM 235 N ILE L 30 43.933 16.121 88.706 1.00 0.07 \ ATOM 236 CA ILE L 30 42.518 15.922 88.989 1.00 0.07 \ ATOM 237 C ILE L 30 41.989 14.586 88.422 1.00 0.07 \ ATOM 238 O ILE L 30 41.377 13.798 89.147 1.00 0.07 \ ATOM 239 CB ILE L 30 41.700 17.115 88.439 1.00 0.07 \ ATOM 240 CG1 ILE L 30 42.081 18.401 89.190 1.00 0.07 \ ATOM 241 CG2 ILE L 30 40.207 16.845 88.535 1.00 0.07 \ ATOM 242 CD1 ILE L 30 41.458 19.669 88.616 1.00 0.07 \ ATOM 243 N PHE L 31 42.278 14.312 87.154 1.00 -0.87 \ ATOM 244 CA PHE L 31 41.802 13.096 86.510 1.00 -0.87 \ ATOM 245 C PHE L 31 42.670 11.887 86.762 1.00 -0.87 \ ATOM 246 O PHE L 31 42.197 10.752 86.680 1.00 -0.87 \ ATOM 247 CB PHE L 31 41.634 13.320 85.004 1.00 -0.87 \ ATOM 248 CG PHE L 31 40.455 14.176 84.663 1.00 -0.87 \ ATOM 249 CD1 PHE L 31 39.167 13.668 84.781 1.00 -0.87 \ ATOM 250 CD2 PHE L 31 40.623 15.509 84.293 1.00 -0.87 \ ATOM 251 CE1 PHE L 31 38.072 14.477 84.554 1.00 -0.87 \ ATOM 252 CE2 PHE L 31 39.524 16.314 84.068 1.00 -0.87 \ ATOM 253 CZ PHE L 31 38.238 15.787 84.200 1.00 -0.87 \ ATOM 254 N LYS L 32 43.945 12.141 87.041 1.00 0.56 \ ATOM 255 CA LYS L 32 44.925 11.097 87.310 1.00 0.56 \ ATOM 256 C LYS L 32 45.255 10.220 86.094 1.00 0.56 \ ATOM 257 O LYS L 32 46.417 10.121 85.703 1.00 0.56 \ ATOM 258 CB LYS L 32 44.478 10.236 88.495 1.00 0.56 \ ATOM 259 CG LYS L 32 44.485 10.957 89.833 1.00 0.56 \ ATOM 260 CD LYS L 32 43.788 10.093 90.876 1.00 0.56 \ ATOM 261 CE LYS L 32 44.214 10.424 92.308 1.00 0.56 \ ATOM 262 NZ LYS L 32 45.167 9.404 92.886 1.00 0.56 \ ATOM 263 N ASP L 33 44.254 9.574 85.501 1.00 -1.75 \ ATOM 264 CA ASP L 33 44.499 8.724 84.340 1.00 -1.75 \ ATOM 265 C ASP L 33 44.823 9.580 83.133 1.00 -1.75 \ ATOM 266 O ASP L 33 44.163 10.596 82.881 1.00 -1.75 \ ATOM 267 CB ASP L 33 43.296 7.830 84.044 1.00 -1.75 \ ATOM 268 CG ASP L 33 43.548 6.868 82.892 1.00 -1.75 \ ATOM 269 OD1 ASP L 33 42.684 6.793 81.982 1.00 -1.75 \ ATOM 270 OD2 ASP L 33 44.593 6.172 82.907 1.00 -1.75 \ ATOM 271 N ALA L 34 45.813 9.124 82.374 1.00 -1.36 \ ATOM 272 CA ALA L 34 46.292 9.813 81.181 1.00 -1.36 \ ATOM 273 C ALA L 34 45.180 10.012 80.160 1.00 -1.36 \ ATOM 274 O ALA L 34 44.927 11.135 79.739 1.00 -1.36 \ ATOM 275 CB ALA L 34 47.468 9.040 80.561 1.00 -1.36 \ ATOM 288 N ARG L 36 41.939 9.822 80.538 1.00 -1.61 \ ATOM 289 CA ARG L 36 40.891 10.701 81.054 1.00 -1.61 \ ATOM 290 C ARG L 36 41.300 12.125 80.821 1.00 -1.61 \ ATOM 291 O ARG L 36 40.592 12.895 80.182 1.00 -1.61 \ ATOM 292 CB ARG L 36 40.679 10.512 82.558 1.00 -1.61 \ ATOM 293 CG ARG L 36 39.937 9.274 82.880 1.00 -1.61 \ ATOM 294 CD ARG L 36 39.745 9.073 84.354 1.00 -1.61 \ ATOM 295 NE ARG L 36 39.277 7.706 84.508 1.00 -1.61 \ ATOM 296 CZ ARG L 36 39.000 7.117 85.657 1.00 -1.61 \ ATOM 297 NH1 ARG L 36 39.132 7.775 86.804 1.00 -1.61 \ ATOM 298 NH2 ARG L 36 38.615 5.851 85.641 1.00 -1.61 \ ATOM 299 N THR L 37 42.470 12.455 81.349 1.00 0.60 \ ATOM 300 CA THR L 37 43.032 13.789 81.245 1.00 0.60 \ ATOM 301 C THR L 37 43.162 14.229 79.790 1.00 0.60 \ ATOM 302 O THR L 37 42.984 15.396 79.482 1.00 0.60 \ ATOM 303 CB THR L 37 44.407 13.840 81.905 1.00 0.60 \ ATOM 304 OG1 THR L 37 44.332 13.246 83.213 1.00 0.60 \ ATOM 305 CG2 THR L 37 44.875 15.284 82.009 1.00 0.60 \ ATOM 306 N LYS L 38 43.477 13.285 78.910 1.00 -1.29 \ ATOM 307 CA LYS L 38 43.626 13.568 77.487 1.00 -1.29 \ ATOM 308 C LYS L 38 42.314 14.015 76.846 1.00 -1.29 \ ATOM 309 O LYS L 38 42.272 15.082 76.245 1.00 -1.29 \ ATOM 310 CB LYS L 38 44.243 12.358 76.760 1.00 -1.29 \ ATOM 311 CG LYS L 38 43.939 12.247 75.265 1.00 -1.29 \ ATOM 312 CD LYS L 38 42.762 11.288 74.982 1.00 -1.29 \ ATOM 313 CE LYS L 38 42.218 11.501 73.568 1.00 -1.29 \ ATOM 314 NZ LYS L 38 41.078 10.584 73.212 1.00 -1.29 \ ATOM 315 N LEU L 39 41.243 13.238 76.997 1.00 -1.34 \ ATOM 316 CA LEU L 39 39.996 13.646 76.387 1.00 -1.34 \ ATOM 317 C LEU L 39 39.418 14.910 76.966 1.00 -1.34 \ ATOM 318 O LEU L 39 38.782 15.656 76.245 1.00 -1.34 \ ATOM 319 CB LEU L 39 38.952 12.527 76.249 1.00 -1.34 \ ATOM 320 CG LEU L 39 38.374 11.695 77.385 1.00 -1.34 \ ATOM 321 CD1 LEU L 39 36.886 11.461 77.133 1.00 -1.34 \ ATOM 322 CD2 LEU L 39 39.115 10.365 77.493 1.00 -1.34 \ ATOM 323 N PHE L 40 39.680 15.189 78.245 1.00 1.21 \ ATOM 324 CA PHE L 40 39.200 16.435 78.826 1.00 1.21 \ ATOM 325 C PHE L 40 39.968 17.591 78.181 1.00 1.21 \ ATOM 326 O PHE L 40 39.381 18.534 77.645 1.00 1.21 \ ATOM 327 CB PHE L 40 39.421 16.488 80.350 1.00 1.21 \ ATOM 328 CG PHE L 40 39.347 17.901 80.925 1.00 1.21 \ ATOM 329 CD1 PHE L 40 38.124 18.483 81.244 1.00 1.21 \ ATOM 330 CD2 PHE L 40 40.508 18.663 81.092 1.00 1.21 \ ATOM 331 CE1 PHE L 40 38.051 19.795 81.699 1.00 1.21 \ ATOM 332 CE2 PHE L 40 40.444 19.985 81.549 1.00 1.21 \ ATOM 333 CZ PHE L 40 39.216 20.551 81.857 1.00 1.21 \ ATOM 334 N TRP L 41 41.293 17.493 78.241 1.00 1.21 \ ATOM 335 CA TRP L 41 42.182 18.517 77.733 1.00 1.21 \ ATOM 336 C TRP L 41 41.996 18.851 76.268 1.00 1.21 \ ATOM 337 O TRP L 41 42.072 20.017 75.884 1.00 1.21 \ ATOM 338 CB TRP L 41 43.642 18.137 77.986 1.00 1.21 \ ATOM 339 CG TRP L 41 44.548 19.315 77.862 1.00 1.21 \ ATOM 340 CD1 TRP L 41 45.448 19.575 76.854 1.00 1.21 \ ATOM 341 CD2 TRP L 41 44.609 20.432 78.753 1.00 1.21 \ ATOM 342 NE1 TRP L 41 46.054 20.793 77.062 1.00 1.21 \ ATOM 343 CE2 TRP L 41 45.557 21.343 78.221 1.00 1.21 \ ATOM 344 CE3 TRP L 41 43.953 20.765 79.943 1.00 1.21 \ ATOM 345 CZ2 TRP L 41 45.861 22.553 78.846 1.00 1.21 \ ATOM 346 CZ3 TRP L 41 44.253 21.965 80.559 1.00 1.21 \ ATOM 347 CH2 TRP L 41 45.199 22.844 80.012 1.00 1.21 \ ATOM 348 N ILE L 42 41.752 17.832 75.462 1.00 -1.34 \ ATOM 349 CA ILE L 42 41.571 18.006 74.034 1.00 -1.34 \ ATOM 350 C ILE L 42 40.570 19.123 73.677 1.00 -1.34 \ ATOM 351 O ILE L 42 40.851 19.973 72.819 1.00 -1.34 \ ATOM 352 CB ILE L 42 41.234 16.624 73.383 1.00 -1.34 \ ATOM 353 CG1 ILE L 42 42.093 16.392 72.144 1.00 -1.34 \ ATOM 354 CG2 ILE L 42 39.758 16.453 73.129 1.00 -1.34 \ ATOM 355 CD1 ILE L 42 43.335 15.541 72.445 1.00 -1.34 \ ATOM 356 N SER L 43 39.446 19.176 74.385 1.00 -1.06 \ ATOM 357 CA SER L 43 38.436 20.192 74.126 1.00 -1.06 \ ATOM 358 C SER L 43 38.614 21.441 74.968 1.00 -1.06 \ ATOM 359 O SER L 43 38.344 22.554 74.515 1.00 -1.06 \ ATOM 360 CB SER L 43 37.036 19.644 74.369 1.00 -1.06 \ ATOM 361 OG SER L 43 36.677 18.706 73.375 1.00 -1.06 \ ATOM 362 N TYR L 44 39.051 21.240 76.204 1.00 1.21 \ ATOM 363 CA TYR L 44 39.254 22.332 77.139 1.00 1.21 \ ATOM 364 C TYR L 44 40.254 23.376 76.631 1.00 1.21 \ ATOM 365 O TYR L 44 40.067 24.573 76.804 1.00 1.21 \ ATOM 366 CB TYR L 44 39.740 21.762 78.473 1.00 1.21 \ ATOM 367 CG TYR L 44 39.981 22.821 79.510 1.00 1.21 \ ATOM 368 CD1 TYR L 44 38.906 23.498 80.087 1.00 1.21 \ ATOM 369 CD2 TYR L 44 41.277 23.156 79.909 1.00 1.21 \ ATOM 370 CE1 TYR L 44 39.107 24.484 81.041 1.00 1.21 \ ATOM 371 CE2 TYR L 44 41.499 24.137 80.862 1.00 1.21 \ ATOM 372 CZ TYR L 44 40.409 24.794 81.427 1.00 1.21 \ ATOM 373 OH TYR L 44 40.593 25.729 82.413 1.00 1.21 \ """, "e2a2qL3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2a2qL3_csv", state=0, origin=1) cmd.zoom("e2a2qL3_csv", animate=-1)