cmd.read_pdbstr("""\ ATOM 1 N LEU L 5 45.169 32.212 99.231 0.50 -1.00 \ ATOM 2 CA LEU L 5 44.916 30.948 99.920 1.00 -1.00 \ ATOM 3 C LEU L 5 43.907 30.012 99.240 1.00 -1.00 \ ATOM 4 O LEU L 5 43.338 29.140 99.912 1.00 -1.00 \ ATOM 5 CB LEU L 5 44.478 31.199 101.377 1.00 -1.00 \ ATOM 6 CG LEU L 5 45.449 31.638 102.492 1.00 -1.00 \ ATOM 7 CD1 LEU L 5 46.549 30.596 102.674 1.00 -1.00 \ ATOM 8 CD2 LEU L 5 46.029 33.028 102.212 1.00 -1.00 \ ATOM 33 N LEU L 8 44.562 25.913 98.754 1.00 -1.00 \ ATOM 34 CA LEU L 8 44.577 25.144 99.992 1.00 -1.00 \ ATOM 35 C LEU L 8 43.307 24.289 99.953 1.00 -1.00 \ ATOM 36 O LEU L 8 43.191 23.277 100.665 1.00 -1.00 \ ATOM 37 CB LEU L 8 44.553 26.061 101.216 1.00 -1.00 \ ATOM 38 CG LEU L 8 45.868 26.218 101.978 1.00 -1.00 \ ATOM 39 CD1 LEU L 8 46.866 26.977 101.133 1.00 -1.00 \ ATOM 40 CD2 LEU L 8 45.617 26.955 103.286 1.00 -1.00 \ ATOM 41 N ARG L 9 42.375 24.706 99.091 1.00 -1.00 \ ATOM 42 CA ARG L 9 41.091 24.042 98.882 1.00 -1.00 \ ATOM 43 C ARG L 9 41.230 23.145 97.660 1.00 -1.00 \ ATOM 44 O ARG L 9 41.856 23.533 96.664 1.00 -1.00 \ ATOM 45 CB ARG L 9 39.981 25.066 98.582 1.00 -1.00 \ ATOM 46 CG ARG L 9 40.034 26.363 99.372 1.00 -1.00 \ ATOM 47 CD ARG L 9 38.953 27.327 98.909 0.00 -1.00 \ ATOM 48 NE ARG L 9 37.615 26.764 99.076 0.00 -1.00 \ ATOM 49 CZ ARG L 9 36.514 27.264 98.522 0.00 -1.00 \ ATOM 50 NH1 ARG L 9 36.577 28.347 97.759 0.00 -1.00 \ ATOM 51 NH2 ARG L 9 35.346 26.672 98.728 0.00 -1.00 \ ATOM 52 N PRO L 10 40.660 21.928 97.720 1.00 -0.04 \ ATOM 53 CA PRO L 10 40.737 21.005 96.586 1.00 -0.04 \ ATOM 54 C PRO L 10 40.077 21.640 95.363 1.00 -0.04 \ ATOM 55 O PRO L 10 39.121 22.411 95.495 1.00 -0.04 \ ATOM 56 CB PRO L 10 39.968 19.779 97.086 1.00 -0.04 \ ATOM 57 CG PRO L 10 39.020 20.345 98.087 1.00 -0.04 \ ATOM 58 CD PRO L 10 39.889 21.333 98.822 1.00 -0.04 \ ATOM 59 N GLY L 11 40.605 21.322 94.185 1.00 1.21 \ ATOM 60 CA GLY L 11 40.090 21.884 92.948 1.00 1.21 \ ATOM 61 C GLY L 11 38.602 21.759 92.704 1.00 1.21 \ ATOM 62 O GLY L 11 37.958 20.863 93.240 1.00 1.21 \ ATOM 63 N SER L 12 38.070 22.637 91.861 1.00 0.38 \ ATOM 64 CA SER L 12 36.648 22.636 91.527 1.00 0.38 \ ATOM 65 C SER L 12 36.509 23.095 90.078 1.00 0.38 \ ATOM 66 O SER L 12 37.025 24.149 89.721 1.00 0.38 \ ATOM 67 CB SER L 12 35.898 23.593 92.469 1.00 0.38 \ ATOM 68 OG SER L 12 34.498 23.617 92.234 1.00 0.38 \ ATOM 69 N LEU L 13 35.821 22.318 89.243 1.00 0.13 \ ATOM 70 CA LEU L 13 35.653 22.686 87.832 1.00 0.13 \ ATOM 71 C LEU L 13 34.874 23.976 87.594 1.00 0.13 \ ATOM 72 O LEU L 13 35.193 24.721 86.670 1.00 0.13 \ ATOM 73 CB LEU L 13 35.041 21.545 87.017 1.00 0.13 \ ATOM 74 CG LEU L 13 35.970 20.796 86.056 1.00 0.13 \ ATOM 75 CD1 LEU L 13 35.143 19.895 85.147 1.00 0.13 \ ATOM 76 CD2 LEU L 13 36.766 21.779 85.214 1.00 0.13 \ ATOM 89 N ARG L 15 34.132 26.629 90.084 1.00 0.56 \ ATOM 90 CA ARG L 15 34.995 27.604 90.730 1.00 0.56 \ ATOM 91 C ARG L 15 36.301 27.900 89.999 1.00 0.56 \ ATOM 92 O ARG L 15 36.551 29.040 89.611 1.00 0.56 \ ATOM 93 CB ARG L 15 35.307 27.165 92.154 1.00 0.56 \ ATOM 94 CG ARG L 15 35.976 28.238 92.983 1.00 0.56 \ ATOM 95 CD ARG L 15 36.538 27.668 94.260 1.00 0.56 \ ATOM 96 NE ARG L 15 37.793 26.950 94.050 1.00 0.56 \ ATOM 97 CZ ARG L 15 38.103 25.796 94.635 1.00 0.56 \ ATOM 98 NH1 ARG L 15 39.278 25.225 94.394 1.00 0.56 \ ATOM 99 NH2 ARG L 15 37.225 25.192 95.431 1.00 0.56 \ ATOM 112 N CYS L 17 37.692 26.343 86.885 1.00 1.21 \ ATOM 113 CA CYS L 17 37.719 26.386 85.422 1.00 1.21 \ ATOM 114 C CYS L 17 36.572 27.068 84.696 1.00 1.21 \ ATOM 115 O CYS L 17 36.784 27.611 83.612 1.00 1.21 \ ATOM 116 CB CYS L 17 37.902 24.993 84.829 1.00 1.21 \ ATOM 117 SG CYS L 17 39.511 24.207 85.152 1.00 1.21 \ ATOM 118 N LYS L 18 35.358 26.997 85.234 1.00 0.56 \ ATOM 119 CA LYS L 18 34.209 27.631 84.583 1.00 0.56 \ ATOM 120 C LYS L 18 33.984 29.036 85.152 1.00 0.56 \ ATOM 121 O LYS L 18 33.810 30.005 84.408 1.00 0.56 \ ATOM 122 CB LYS L 18 32.953 26.769 84.752 1.00 0.56 \ ATOM 123 CG LYS L 18 33.079 25.332 84.234 1.00 0.56 \ ATOM 124 CD LYS L 18 33.259 25.266 82.714 1.00 0.56 \ ATOM 125 CE LYS L 18 33.556 23.839 82.239 1.00 0.56 \ ATOM 126 NZ LYS L 18 32.462 22.893 82.581 1.00 0.56 \ ATOM 151 N GLN L 21 39.202 31.224 85.248 1.00 -1.30 \ ATOM 152 CA GLN L 21 39.881 30.551 84.128 1.00 -1.30 \ ATOM 153 C GLN L 21 41.071 29.754 84.676 1.00 -1.30 \ ATOM 154 O GLN L 21 41.989 30.333 85.246 1.00 -1.30 \ ATOM 155 CB GLN L 21 40.383 31.562 83.082 1.00 -1.30 \ ATOM 156 CG GLN L 21 41.158 30.905 81.917 1.00 -1.30 \ ATOM 157 CD GLN L 21 41.853 31.900 80.992 1.00 -1.30 \ ATOM 158 OE1 GLN L 21 42.671 32.707 81.431 1.00 -1.30 \ ATOM 159 NE2 GLN L 21 41.555 31.817 79.699 1.00 -1.30 \ ATOM 160 N CYS L 22 41.084 28.443 84.484 1.00 1.21 \ ATOM 161 CA CYS L 22 42.187 27.651 85.008 1.00 1.21 \ ATOM 162 C CYS L 22 43.365 27.479 84.060 1.00 1.21 \ ATOM 163 O CYS L 22 43.311 27.873 82.896 1.00 1.21 \ ATOM 164 CB CYS L 22 41.687 26.283 85.450 1.00 1.21 \ ATOM 165 SG CYS L 22 40.876 25.324 84.137 1.00 1.21 \ ATOM 166 N SER L 23 44.451 26.924 84.586 1.00 -0.62 \ ATOM 167 CA SER L 23 45.654 26.657 83.802 1.00 -0.62 \ ATOM 168 C SER L 23 45.669 25.154 83.548 1.00 -0.62 \ ATOM 169 O SER L 23 44.789 24.444 84.027 1.00 -0.62 \ ATOM 170 CB SER L 23 46.911 27.043 84.595 1.00 -0.62 \ ATOM 171 OG SER L 23 47.228 26.091 85.608 1.00 -0.62 \ ATOM 172 N PHE L 24 46.667 24.656 82.825 1.00 -0.91 \ ATOM 173 CA PHE L 24 46.736 23.225 82.580 1.00 -0.91 \ ATOM 174 C PHE L 24 47.033 22.483 83.877 1.00 -0.91 \ ATOM 175 O PHE L 24 46.396 21.464 84.150 1.00 -0.91 \ ATOM 176 CB PHE L 24 47.768 22.864 81.514 1.00 -0.91 \ ATOM 177 CG PHE L 24 47.896 21.384 81.292 1.00 -0.91 \ ATOM 178 CD1 PHE L 24 49.028 20.695 81.726 1.00 -0.91 \ ATOM 179 CD2 PHE L 24 46.855 20.663 80.716 1.00 -0.91 \ ATOM 180 CE1 PHE L 24 49.118 19.300 81.598 1.00 -0.91 \ ATOM 181 CE2 PHE L 24 46.931 19.270 80.581 1.00 -0.91 \ ATOM 182 CZ PHE L 24 48.065 18.587 81.025 1.00 -0.91 \ ATOM 207 N ALA L 27 43.955 22.173 86.068 1.00 0.56 \ ATOM 208 CA ALA L 27 43.000 21.204 85.553 1.00 0.56 \ ATOM 209 C ALA L 27 43.481 19.806 85.877 1.00 0.56 \ ATOM 210 O ALA L 27 42.684 18.954 86.261 1.00 0.56 \ ATOM 211 CB ALA L 27 42.842 21.364 84.062 1.00 0.56 \ ATOM 212 N ARG L 28 44.790 19.589 85.738 1.00 0.56 \ ATOM 213 CA ARG L 28 45.433 18.293 86.007 1.00 0.56 \ ATOM 214 C ARG L 28 45.391 18.004 87.500 1.00 0.56 \ ATOM 215 O ARG L 28 45.296 16.856 87.926 1.00 0.56 \ ATOM 216 CB ARG L 28 46.885 18.330 85.528 1.00 0.56 \ ATOM 217 CG ARG L 28 47.493 16.973 85.218 1.00 0.56 \ ATOM 218 CD ARG L 28 48.558 16.594 86.219 1.00 0.56 \ ATOM 219 NE ARG L 28 47.980 16.368 87.539 1.00 0.56 \ ATOM 220 CZ ARG L 28 48.376 16.988 88.645 1.00 0.56 \ ATOM 221 NH1 ARG L 28 47.791 16.716 89.804 1.00 0.56 \ ATOM 222 NH2 ARG L 28 49.346 17.887 88.589 1.00 0.56 \ ATOM 235 N ILE L 30 42.993 18.784 89.238 1.00 0.07 \ ATOM 236 CA ILE L 30 41.598 18.359 89.445 1.00 0.07 \ ATOM 237 C ILE L 30 41.393 16.935 88.915 1.00 0.07 \ ATOM 238 O ILE L 30 41.218 15.996 89.686 1.00 0.07 \ ATOM 239 CB ILE L 30 40.578 19.299 88.720 1.00 0.07 \ ATOM 240 CG1 ILE L 30 40.540 20.670 89.385 1.00 0.07 \ ATOM 241 CG2 ILE L 30 39.184 18.697 88.726 1.00 0.07 \ ATOM 242 CD1 ILE L 30 39.620 21.658 88.682 1.00 0.07 \ ATOM 243 N PHE L 31 41.428 16.783 87.594 1.00 -0.87 \ ATOM 244 CA PHE L 31 41.240 15.480 86.959 1.00 -0.87 \ ATOM 245 C PHE L 31 42.297 14.460 87.368 1.00 -0.87 \ ATOM 246 O PHE L 31 42.098 13.258 87.181 1.00 -0.87 \ ATOM 247 CB PHE L 31 41.223 15.631 85.437 1.00 -0.87 \ ATOM 248 CG PHE L 31 40.071 16.451 84.924 1.00 -0.87 \ ATOM 249 CD1 PHE L 31 40.179 17.836 84.811 1.00 -0.87 \ ATOM 250 CD2 PHE L 31 38.873 15.840 84.566 1.00 -0.87 \ ATOM 251 CE1 PHE L 31 39.113 18.595 84.349 1.00 -0.87 \ ATOM 252 CE2 PHE L 31 37.806 16.592 84.103 1.00 -0.87 \ ATOM 253 CZ PHE L 31 37.925 17.972 83.995 1.00 -0.87 \ ATOM 254 N LYS L 32 43.411 14.953 87.913 1.00 0.56 \ ATOM 255 CA LYS L 32 44.545 14.148 88.382 1.00 0.56 \ ATOM 256 C LYS L 32 45.270 13.322 87.314 1.00 0.56 \ ATOM 257 O LYS L 32 46.484 13.455 87.159 1.00 0.56 \ ATOM 258 CB LYS L 32 44.155 13.266 89.581 1.00 0.56 \ ATOM 259 CG LYS L 32 43.595 14.017 90.798 1.00 0.56 \ ATOM 260 CD LYS L 32 44.496 15.167 91.256 1.00 0.56 \ ATOM 261 CE LYS L 32 45.838 14.709 91.846 1.00 0.56 \ ATOM 262 NZ LYS L 32 46.662 15.865 92.339 1.00 0.56 \ ATOM 263 N ASP L 33 44.542 12.461 86.599 1.00 -1.75 \ ATOM 264 CA ASP L 33 45.125 11.619 85.550 1.00 -1.75 \ ATOM 265 C ASP L 33 45.449 12.411 84.297 1.00 -1.75 \ ATOM 266 O ASP L 33 44.618 13.182 83.816 1.00 -1.75 \ ATOM 267 CB ASP L 33 44.177 10.470 85.186 1.00 -1.75 \ ATOM 268 CG ASP L 33 44.654 9.670 83.976 1.00 -1.75 \ ATOM 269 OD1 ASP L 33 44.199 9.963 82.849 1.00 -1.75 \ ATOM 270 OD2 ASP L 33 45.482 8.749 84.151 1.00 -1.75 \ ATOM 271 N ALA L 34 46.619 12.133 83.727 1.00 -1.36 \ ATOM 272 CA ALA L 34 47.103 12.798 82.520 1.00 -1.36 \ ATOM 273 C ALA L 34 46.097 12.790 81.378 1.00 -1.36 \ ATOM 274 O ALA L 34 45.662 13.845 80.923 1.00 -1.36 \ ATOM 275 CB ALA L 34 48.403 12.164 82.068 1.00 -1.36 \ ATOM 288 N ARG L 36 42.954 12.097 81.386 1.00 -1.61 \ ATOM 289 CA ARG L 36 41.689 12.724 81.763 1.00 -1.61 \ ATOM 290 C ARG L 36 41.835 14.235 81.633 1.00 -1.61 \ ATOM 291 O ARG L 36 40.916 14.926 81.196 1.00 -1.61 \ ATOM 292 CB ARG L 36 41.301 12.329 83.190 1.00 -1.61 \ ATOM 293 CG ARG L 36 41.001 10.848 83.288 1.00 -1.61 \ ATOM 294 CD ARG L 36 40.822 10.329 84.700 1.00 -1.61 \ ATOM 295 NE ARG L 36 41.185 8.913 84.731 1.00 -1.61 \ ATOM 296 CZ ARG L 36 40.375 7.920 85.088 1.00 -1.61 \ ATOM 297 NH1 ARG L 36 39.130 8.164 85.469 1.00 -1.61 \ ATOM 298 NH2 ARG L 36 40.808 6.666 85.020 1.00 -1.61 \ ATOM 299 N THR L 37 43.016 14.737 81.976 1.00 0.60 \ ATOM 300 CA THR L 37 43.294 16.160 81.878 1.00 0.60 \ ATOM 301 C THR L 37 43.440 16.524 80.397 1.00 0.60 \ ATOM 302 O THR L 37 42.978 17.583 79.965 1.00 0.60 \ ATOM 303 CB THR L 37 44.576 16.538 82.656 1.00 0.60 \ ATOM 304 OG1 THR L 37 44.483 16.057 84.006 1.00 0.60 \ ATOM 305 CG2 THR L 37 44.746 18.037 82.692 1.00 0.60 \ ATOM 306 N LYS L 38 44.032 15.620 79.616 1.00 -1.29 \ ATOM 307 CA LYS L 38 44.218 15.840 78.182 1.00 -1.29 \ ATOM 308 C LYS L 38 42.849 16.012 77.519 1.00 -1.29 \ ATOM 309 O LYS L 38 42.561 17.055 76.930 1.00 -1.29 \ ATOM 310 CB LYS L 38 44.944 14.654 77.524 1.00 -1.29 \ ATOM 311 CG LYS L 38 46.210 14.151 78.225 1.00 -1.29 \ ATOM 312 CD LYS L 38 47.329 15.186 78.292 1.00 -1.29 \ ATOM 313 CE LYS L 38 48.494 14.712 79.180 1.00 -1.29 \ ATOM 314 NZ LYS L 38 49.129 13.428 78.742 1.00 -1.29 \ ATOM 315 N LEU L 39 42.004 14.990 77.654 1.00 -1.34 \ ATOM 316 CA LEU L 39 40.652 14.975 77.090 1.00 -1.34 \ ATOM 317 C LEU L 39 39.871 16.263 77.398 1.00 -1.34 \ ATOM 318 O LEU L 39 39.182 16.815 76.536 1.00 -1.34 \ ATOM 319 CB LEU L 39 39.895 13.757 77.625 1.00 -1.34 \ ATOM 320 CG LEU L 39 38.891 13.016 76.731 1.00 -1.34 \ ATOM 321 CD1 LEU L 39 38.570 11.665 77.362 1.00 -1.34 \ ATOM 322 CD2 LEU L 39 37.616 13.820 76.514 1.00 -1.34 \ ATOM 323 N PHE L 40 39.963 16.726 78.636 1.00 1.21 \ ATOM 324 CA PHE L 40 39.290 17.948 79.036 1.00 1.21 \ ATOM 325 C PHE L 40 39.969 19.136 78.368 1.00 1.21 \ ATOM 326 O PHE L 40 39.320 19.977 77.754 1.00 1.21 \ ATOM 327 CB PHE L 40 39.337 18.089 80.571 1.00 1.21 \ ATOM 328 CG PHE L 40 39.226 19.513 81.069 1.00 1.21 \ ATOM 329 CD1 PHE L 40 38.000 20.167 81.102 1.00 1.21 \ ATOM 330 CD2 PHE L 40 40.363 20.206 81.493 1.00 1.21 \ ATOM 331 CE1 PHE L 40 37.906 21.495 81.548 1.00 1.21 \ ATOM 332 CE2 PHE L 40 40.280 21.528 81.938 1.00 1.21 \ ATOM 333 CZ PHE L 40 39.055 22.173 81.966 1.00 1.21 \ ATOM 334 N TRP L 41 41.291 19.159 78.428 1.00 1.21 \ ATOM 335 CA TRP L 41 42.052 20.270 77.887 1.00 1.21 \ ATOM 336 C TRP L 41 41.918 20.474 76.382 1.00 1.21 \ ATOM 337 O TRP L 41 41.737 21.604 75.920 1.00 1.21 \ ATOM 338 CB TRP L 41 43.521 20.156 78.308 1.00 1.21 \ ATOM 339 CG TRP L 41 44.229 21.483 78.378 1.00 1.21 \ ATOM 340 CD1 TRP L 41 45.244 21.916 77.571 1.00 1.21 \ ATOM 341 CD2 TRP L 41 43.950 22.557 79.281 1.00 1.21 \ ATOM 342 NE1 TRP L 41 45.607 23.195 77.911 1.00 1.21 \ ATOM 343 CE2 TRP L 41 44.830 23.614 78.957 1.00 1.21 \ ATOM 344 CE3 TRP L 41 43.041 22.731 80.329 1.00 1.21 \ ATOM 345 CZ2 TRP L 41 44.826 24.833 79.648 1.00 1.21 \ ATOM 346 CZ3 TRP L 41 43.039 23.944 81.016 1.00 1.21 \ ATOM 347 CH2 TRP L 41 43.928 24.978 80.669 1.00 1.21 \ ATOM 348 N ILE L 42 41.933 19.391 75.619 1.00 -1.34 \ ATOM 349 CA ILE L 42 41.826 19.501 74.167 1.00 -1.34 \ ATOM 350 C ILE L 42 40.589 20.291 73.787 1.00 -1.34 \ ATOM 351 O ILE L 42 40.537 20.904 72.728 1.00 -1.34 \ ATOM 352 CB ILE L 42 41.772 18.122 73.473 1.00 -1.34 \ ATOM 353 CG1 ILE L 42 40.469 17.393 73.818 1.00 -1.34 \ ATOM 354 CG2 ILE L 42 42.977 17.284 73.880 1.00 -1.34 \ ATOM 355 CD1 ILE L 42 40.286 16.050 73.102 1.00 -1.34 \ ATOM 356 N SER L 43 39.597 20.288 74.661 1.00 -1.06 \ ATOM 357 CA SER L 43 38.378 21.021 74.394 1.00 -1.06 \ ATOM 358 C SER L 43 38.392 22.384 75.112 1.00 -1.06 \ ATOM 359 O SER L 43 37.790 23.354 74.642 1.00 -1.06 \ ATOM 360 CB SER L 43 37.179 20.189 74.843 1.00 -1.06 \ ATOM 361 OG SER L 43 37.276 18.840 74.406 1.00 -1.06 \ ATOM 362 N TYR L 44 39.104 22.454 76.235 1.00 1.21 \ ATOM 363 CA TYR L 44 39.198 23.672 77.035 1.00 1.21 \ ATOM 364 C TYR L 44 40.103 24.737 76.412 1.00 1.21 \ ATOM 365 O TYR L 44 39.927 25.935 76.657 1.00 1.21 \ ATOM 366 CB TYR L 44 39.699 23.332 78.444 1.00 1.21 \ ATOM 367 CG TYR L 44 39.552 24.469 79.420 1.00 1.21 \ ATOM 368 CD1 TYR L 44 38.339 24.718 80.041 1.00 1.21 \ ATOM 369 CD2 TYR L 44 40.608 25.336 79.674 1.00 1.21 \ ATOM 370 CE1 TYR L 44 38.175 25.812 80.887 1.00 1.21 \ ATOM 371 CE2 TYR L 44 40.458 26.436 80.518 1.00 1.21 \ ATOM 372 CZ TYR L 44 39.237 26.669 81.117 1.00 1.21 \ ATOM 373 OH TYR L 44 39.061 27.773 81.919 1.00 1.21 \ """, "e2aeiL3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2aeiL3_csv", state=0, origin=1) cmd.zoom("e2aeiL3_csv", animate=-1)