cmd.read_pdbstr("""\ ATOM 1 N LEU L 5 46.633 31.717 99.180 1.00 -1.00 \ ATOM 2 CA LEU L 5 45.560 31.293 100.102 1.00 -1.00 \ ATOM 3 C LEU L 5 44.453 30.494 99.408 1.00 -1.00 \ ATOM 4 O LEU L 5 43.770 29.710 100.052 1.00 -1.00 \ ATOM 5 CB LEU L 5 44.976 32.482 100.873 1.00 -1.00 \ ATOM 6 CG LEU L 5 45.232 32.629 102.393 1.00 -1.00 \ ATOM 7 CD1 LEU L 5 46.361 31.765 102.916 1.00 -1.00 \ ATOM 8 CD2 LEU L 5 45.504 34.074 102.703 1.00 -1.00 \ ATOM 33 N LEU L 8 44.957 26.594 99.165 1.00 -1.00 \ ATOM 34 CA LEU L 8 44.716 25.774 100.347 1.00 -1.00 \ ATOM 35 C LEU L 8 43.453 24.977 100.073 1.00 -1.00 \ ATOM 36 O LEU L 8 43.307 23.849 100.542 1.00 -1.00 \ ATOM 37 CB LEU L 8 44.562 26.622 101.617 1.00 -1.00 \ ATOM 38 CG LEU L 8 45.847 26.978 102.373 1.00 -1.00 \ ATOM 39 CD1 LEU L 8 46.773 27.773 101.486 1.00 -1.00 \ ATOM 40 CD2 LEU L 8 45.503 27.759 103.624 1.00 -1.00 \ ATOM 41 N ARG L 9 42.557 25.567 99.286 1.00 -1.00 \ ATOM 42 CA ARG L 9 41.296 24.941 98.901 1.00 -1.00 \ ATOM 43 C ARG L 9 41.620 23.715 98.059 1.00 -1.00 \ ATOM 44 O ARG L 9 42.459 23.780 97.159 1.00 -1.00 \ ATOM 45 CB ARG L 9 40.440 25.911 98.074 1.00 -1.00 \ ATOM 46 CG ARG L 9 40.049 27.207 98.751 1.00 -1.00 \ ATOM 47 CD ARG L 9 39.111 27.976 97.842 1.00 -1.00 \ ATOM 48 NE ARG L 9 38.631 29.239 98.401 1.00 -1.00 \ ATOM 49 CZ ARG L 9 37.625 29.356 99.269 1.00 -1.00 \ ATOM 50 NH1 ARG L 9 36.971 28.281 99.708 1.00 -1.00 \ ATOM 51 NH2 ARG L 9 37.239 30.566 99.674 1.00 -1.00 \ ATOM 52 N PRO L 10 40.964 22.580 98.339 1.00 -0.04 \ ATOM 53 CA PRO L 10 41.187 21.326 97.611 1.00 -0.04 \ ATOM 54 C PRO L 10 40.817 21.383 96.123 1.00 -0.04 \ ATOM 55 O PRO L 10 39.814 22.019 95.747 1.00 -0.04 \ ATOM 56 CB PRO L 10 40.294 20.329 98.358 1.00 -0.04 \ ATOM 57 CG PRO L 10 40.193 20.910 99.732 1.00 -0.04 \ ATOM 58 CD PRO L 10 39.989 22.374 99.422 1.00 -0.04 \ ATOM 59 N GLY L 11 41.595 20.652 95.316 1.00 1.21 \ ATOM 60 CA GLY L 11 41.390 20.595 93.875 1.00 1.21 \ ATOM 61 C GLY L 11 39.943 20.480 93.427 1.00 1.21 \ ATOM 62 O GLY L 11 39.159 19.688 93.959 1.00 1.21 \ ATOM 63 N SER L 12 39.594 21.295 92.440 1.00 0.38 \ ATOM 64 CA SER L 12 38.255 21.327 91.900 1.00 0.38 \ ATOM 65 C SER L 12 38.326 21.664 90.425 1.00 0.38 \ ATOM 66 O SER L 12 38.910 22.687 90.056 1.00 0.38 \ ATOM 67 CB SER L 12 37.438 22.407 92.624 1.00 0.38 \ ATOM 68 OG SER L 12 36.266 22.750 91.901 1.00 0.38 \ ATOM 69 N LEU L 13 37.672 20.846 89.595 1.00 0.13 \ ATOM 70 CA LEU L 13 37.660 21.116 88.163 1.00 0.13 \ ATOM 71 C LEU L 13 36.967 22.464 87.895 1.00 0.13 \ ATOM 72 O LEU L 13 37.520 23.318 87.202 1.00 0.13 \ ATOM 73 CB LEU L 13 36.985 19.990 87.366 1.00 0.13 \ ATOM 74 CG LEU L 13 37.081 20.109 85.830 1.00 0.13 \ ATOM 75 CD1 LEU L 13 38.508 19.788 85.338 1.00 0.13 \ ATOM 76 CD2 LEU L 13 36.066 19.185 85.168 1.00 0.13 \ ATOM 89 N ARG L 15 36.526 25.129 89.851 1.00 0.56 \ ATOM 90 CA ARG L 15 37.284 26.299 90.286 1.00 0.56 \ ATOM 91 C ARG L 15 38.592 26.536 89.554 1.00 0.56 \ ATOM 92 O ARG L 15 38.898 27.661 89.182 1.00 0.56 \ ATOM 93 CB ARG L 15 37.535 26.245 91.795 1.00 0.56 \ ATOM 94 CG ARG L 15 37.896 27.596 92.432 1.00 0.56 \ ATOM 95 CD ARG L 15 38.287 27.452 93.909 1.00 0.56 \ ATOM 96 NE ARG L 15 39.553 26.738 94.080 1.00 0.56 \ ATOM 97 CZ ARG L 15 39.660 25.478 94.501 1.00 0.56 \ ATOM 98 NH1 ARG L 15 38.573 24.774 94.818 1.00 0.56 \ ATOM 99 NH2 ARG L 15 40.859 24.895 94.546 1.00 0.56 \ ATOM 112 N CYS L 17 39.724 24.908 86.527 1.00 1.21 \ ATOM 113 CA CYS L 17 39.635 24.840 85.073 1.00 1.21 \ ATOM 114 C CYS L 17 38.452 25.555 84.423 1.00 1.21 \ ATOM 115 O CYS L 17 38.596 26.133 83.350 1.00 1.21 \ ATOM 116 CB CYS L 17 39.667 23.376 84.604 1.00 1.21 \ ATOM 117 SG CYS L 17 41.151 22.432 85.092 1.00 1.21 \ ATOM 118 N LYS L 18 37.277 25.492 85.035 1.00 0.56 \ ATOM 119 CA LYS L 18 36.107 26.138 84.445 1.00 0.56 \ ATOM 120 C LYS L 18 35.998 27.632 84.758 1.00 0.56 \ ATOM 121 O LYS L 18 35.863 28.460 83.850 1.00 0.56 \ ATOM 122 CB LYS L 18 34.834 25.377 84.831 1.00 0.56 \ ATOM 123 CG LYS L 18 34.567 24.108 83.981 1.00 0.56 \ ATOM 124 CD LYS L 18 33.579 24.396 82.815 1.00 0.56 \ ATOM 125 CE LYS L 18 33.411 23.219 81.845 1.00 0.56 \ ATOM 126 NZ LYS L 18 34.645 22.998 81.045 1.00 0.56 \ ATOM 151 N GLN L 21 41.684 29.426 84.409 1.00 -1.30 \ ATOM 152 CA GLN L 21 42.337 28.686 83.321 1.00 -1.30 \ ATOM 153 C GLN L 21 43.395 27.750 83.918 1.00 -1.30 \ ATOM 154 O GLN L 21 44.307 28.217 84.618 1.00 -1.30 \ ATOM 155 CB GLN L 21 43.003 29.646 82.319 1.00 -1.30 \ ATOM 156 CG GLN L 21 42.040 30.537 81.526 1.00 -1.30 \ ATOM 157 CD GLN L 21 42.757 31.517 80.589 1.00 -1.30 \ ATOM 158 OE1 GLN L 21 43.869 31.981 80.877 1.00 -1.30 \ ATOM 159 NE2 GLN L 21 42.108 31.849 79.471 1.00 -1.30 \ ATOM 160 N CYS L 22 43.276 26.446 83.676 1.00 1.21 \ ATOM 161 CA CYS L 22 44.252 25.499 84.216 1.00 1.21 \ ATOM 162 C CYS L 22 45.262 24.959 83.203 1.00 1.21 \ ATOM 163 O CYS L 22 45.100 25.134 81.991 1.00 1.21 \ ATOM 164 CB CYS L 22 43.546 24.341 84.934 1.00 1.21 \ ATOM 165 SG CYS L 22 42.617 23.166 83.891 1.00 1.21 \ ATOM 166 N SER L 23 46.326 24.352 83.724 1.00 -0.62 \ ATOM 167 CA SER L 23 47.390 23.756 82.921 1.00 -0.62 \ ATOM 168 C SER L 23 47.115 22.265 82.735 1.00 -0.62 \ ATOM 169 O SER L 23 46.317 21.682 83.480 1.00 -0.62 \ ATOM 170 CB SER L 23 48.721 23.898 83.664 1.00 -0.62 \ ATOM 171 OG SER L 23 48.789 23.008 84.774 1.00 -0.62 \ ATOM 172 N PHE L 24 47.853 21.620 81.836 1.00 -0.91 \ ATOM 173 CA PHE L 24 47.647 20.186 81.647 1.00 -0.91 \ ATOM 174 C PHE L 24 47.841 19.380 82.934 1.00 -0.91 \ ATOM 175 O PHE L 24 47.045 18.483 83.225 1.00 -0.91 \ ATOM 176 CB PHE L 24 48.562 19.629 80.558 1.00 -0.91 \ ATOM 177 CG PHE L 24 48.324 18.173 80.262 1.00 -0.91 \ ATOM 178 CD1 PHE L 24 47.316 17.786 79.390 1.00 -0.91 \ ATOM 179 CD2 PHE L 24 49.087 17.180 80.891 1.00 -0.91 \ ATOM 180 CE1 PHE L 24 47.052 16.432 79.136 1.00 -0.91 \ ATOM 181 CE2 PHE L 24 48.827 15.823 80.646 1.00 -0.91 \ ATOM 182 CZ PHE L 24 47.807 15.456 79.769 1.00 -0.91 \ ATOM 207 N ALA L 27 45.082 19.722 85.583 1.00 0.56 \ ATOM 208 CA ALA L 27 43.982 18.886 85.100 1.00 0.56 \ ATOM 209 C ALA L 27 44.331 17.416 85.281 1.00 0.56 \ ATOM 210 O ALA L 27 43.512 16.641 85.787 1.00 0.56 \ ATOM 211 CB ALA L 27 43.666 19.183 83.648 1.00 0.56 \ ATOM 212 N ARG L 28 45.587 17.075 84.994 1.00 0.56 \ ATOM 213 CA ARG L 28 46.059 15.697 85.119 1.00 0.56 \ ATOM 214 C ARG L 28 45.941 15.224 86.552 1.00 0.56 \ ATOM 215 O ARG L 28 45.555 14.086 86.803 1.00 0.56 \ ATOM 216 CB ARG L 28 47.513 15.543 84.638 1.00 0.56 \ ATOM 217 CG ARG L 28 47.907 14.103 84.344 1.00 0.56 \ ATOM 218 CD ARG L 28 49.206 13.727 85.050 1.00 0.56 \ ATOM 219 NE ARG L 28 49.026 12.555 85.912 1.00 0.56 \ ATOM 220 CZ ARG L 28 49.357 12.511 87.199 1.00 0.56 \ ATOM 221 NH1 ARG L 28 49.905 13.569 87.780 1.00 0.56 \ ATOM 222 NH2 ARG L 28 49.081 11.428 87.922 1.00 0.56 \ ATOM 235 N ILE L 30 43.749 16.240 88.658 1.00 0.07 \ ATOM 236 CA ILE L 30 42.339 16.077 88.975 1.00 0.07 \ ATOM 237 C ILE L 30 41.849 14.738 88.411 1.00 0.07 \ ATOM 238 O ILE L 30 41.341 13.893 89.150 1.00 0.07 \ ATOM 239 CB ILE L 30 41.495 17.260 88.415 1.00 0.07 \ ATOM 240 CG1 ILE L 30 41.807 18.541 89.201 1.00 0.07 \ ATOM 241 CG2 ILE L 30 40.016 16.948 88.492 1.00 0.07 \ ATOM 242 CD1 ILE L 30 41.368 19.827 88.527 1.00 0.07 \ ATOM 243 N PHE L 31 42.107 14.508 87.129 1.00 -0.87 \ ATOM 244 CA PHE L 31 41.677 13.276 86.471 1.00 -0.87 \ ATOM 245 C PHE L 31 42.517 12.033 86.765 1.00 -0.87 \ ATOM 246 O PHE L 31 41.996 10.915 86.702 1.00 -0.87 \ ATOM 247 CB PHE L 31 41.581 13.489 84.962 1.00 -0.87 \ ATOM 248 CG PHE L 31 40.461 14.408 84.545 1.00 -0.87 \ ATOM 249 CD1 PHE L 31 39.156 13.933 84.437 1.00 -0.87 \ ATOM 250 CD2 PHE L 31 40.710 15.745 84.232 1.00 -0.87 \ ATOM 251 CE1 PHE L 31 38.118 14.777 84.025 1.00 -0.87 \ ATOM 252 CE2 PHE L 31 39.675 16.589 83.825 1.00 -0.87 \ ATOM 253 CZ PHE L 31 38.391 16.097 83.725 1.00 -0.87 \ ATOM 254 N LYS L 32 43.792 12.241 87.105 1.00 0.56 \ ATOM 255 CA LYS L 32 44.743 11.164 87.415 1.00 0.56 \ ATOM 256 C LYS L 32 45.151 10.256 86.238 1.00 0.56 \ ATOM 257 O LYS L 32 46.345 10.114 85.964 1.00 0.56 \ ATOM 258 CB LYS L 32 44.299 10.365 88.648 1.00 0.56 \ ATOM 259 CG LYS L 32 44.396 11.182 89.950 1.00 0.56 \ ATOM 260 CD LYS L 32 43.914 10.415 91.197 1.00 0.56 \ ATOM 261 CE LYS L 32 44.143 11.213 92.504 1.00 0.56 \ ATOM 262 NZ LYS L 32 43.370 12.493 92.557 1.00 0.56 \ ATOM 263 N ASP L 33 44.194 9.626 85.557 1.00 -1.75 \ ATOM 264 CA ASP L 33 44.528 8.784 84.402 1.00 -1.75 \ ATOM 265 C ASP L 33 44.811 9.686 83.198 1.00 -1.75 \ ATOM 266 O ASP L 33 44.064 10.628 82.923 1.00 -1.75 \ ATOM 267 CB ASP L 33 43.392 7.797 84.102 1.00 -1.75 \ ATOM 268 CG ASP L 33 43.655 6.945 82.858 1.00 -1.75 \ ATOM 269 OD1 ASP L 33 42.824 6.986 81.920 1.00 -1.75 \ ATOM 270 OD2 ASP L 33 44.691 6.243 82.806 1.00 -1.75 \ ATOM 271 N ALA L 34 45.893 9.380 82.486 1.00 -1.36 \ ATOM 272 CA ALA L 34 46.318 10.158 81.322 1.00 -1.36 \ ATOM 273 C ALA L 34 45.287 10.252 80.212 1.00 -1.36 \ ATOM 274 O ALA L 34 45.080 11.322 79.654 1.00 -1.36 \ ATOM 275 CB ALA L 34 47.613 9.608 80.769 1.00 -1.36 \ ATOM 288 N ARG L 36 42.008 9.958 80.523 1.00 -1.61 \ ATOM 289 CA ARG L 36 40.843 10.730 80.979 1.00 -1.61 \ ATOM 290 C ARG L 36 41.206 12.207 80.790 1.00 -1.61 \ ATOM 291 O ARG L 36 40.370 13.022 80.422 1.00 -1.61 \ ATOM 292 CB ARG L 36 40.586 10.539 82.485 1.00 -1.61 \ ATOM 293 CG ARG L 36 39.898 9.273 82.959 1.00 -1.61 \ ATOM 294 CD ARG L 36 40.132 9.176 84.472 1.00 -1.61 \ ATOM 295 NE ARG L 36 39.239 8.279 85.195 1.00 -1.61 \ ATOM 296 CZ ARG L 36 39.259 6.953 85.111 1.00 -1.61 \ ATOM 297 NH1 ARG L 36 40.129 6.329 84.327 1.00 -1.61 \ ATOM 298 NH2 ARG L 36 38.385 6.240 85.807 1.00 -1.61 \ ATOM 299 N THR L 37 42.466 12.525 81.083 1.00 0.60 \ ATOM 300 CA THR L 37 43.007 13.882 80.999 1.00 0.60 \ ATOM 301 C THR L 37 43.109 14.410 79.572 1.00 0.60 \ ATOM 302 O THR L 37 42.731 15.551 79.287 1.00 0.60 \ ATOM 303 CB THR L 37 44.414 13.938 81.630 1.00 0.60 \ ATOM 304 OG1 THR L 37 44.375 13.338 82.933 1.00 0.60 \ ATOM 305 CG2 THR L 37 44.894 15.383 81.741 1.00 0.60 \ ATOM 306 N LYS L 38 43.632 13.577 78.683 1.00 -1.29 \ ATOM 307 CA LYS L 38 43.784 13.982 77.295 1.00 -1.29 \ ATOM 308 C LYS L 38 42.411 14.151 76.641 1.00 -1.29 \ ATOM 309 O LYS L 38 42.207 15.051 75.829 1.00 -1.29 \ ATOM 310 CB LYS L 38 44.697 13.000 76.551 1.00 -1.29 \ ATOM 311 CG LYS L 38 46.148 13.080 77.072 1.00 -1.29 \ ATOM 312 CD LYS L 38 46.954 11.793 76.842 1.00 -1.29 \ ATOM 313 CE LYS L 38 48.319 11.863 77.556 1.00 -1.29 \ ATOM 314 NZ LYS L 38 49.124 10.596 77.512 1.00 -1.29 \ ATOM 315 N LEU L 39 41.449 13.365 77.110 1.00 -1.34 \ ATOM 316 CA LEU L 39 40.071 13.415 76.617 1.00 -1.34 \ ATOM 317 C LEU L 39 39.485 14.784 76.984 1.00 -1.34 \ ATOM 318 O LEU L 39 38.721 15.374 76.225 1.00 -1.34 \ ATOM 319 CB LEU L 39 39.257 12.315 77.294 1.00 -1.34 \ ATOM 320 CG LEU L 39 38.323 11.409 76.501 1.00 -1.34 \ ATOM 321 CD1 LEU L 39 37.818 10.272 77.403 1.00 -1.34 \ ATOM 322 CD2 LEU L 39 37.166 12.217 75.951 1.00 -1.34 \ ATOM 323 N PHE L 40 39.877 15.273 78.158 1.00 1.21 \ ATOM 324 CA PHE L 40 39.431 16.560 78.663 1.00 1.21 \ ATOM 325 C PHE L 40 40.114 17.693 77.928 1.00 1.21 \ ATOM 326 O PHE L 40 39.465 18.599 77.403 1.00 1.21 \ ATOM 327 CB PHE L 40 39.715 16.668 80.184 1.00 1.21 \ ATOM 328 CG PHE L 40 39.552 18.074 80.753 1.00 1.21 \ ATOM 329 CD1 PHE L 40 38.289 18.571 81.064 1.00 1.21 \ ATOM 330 CD2 PHE L 40 40.665 18.906 80.953 1.00 1.21 \ ATOM 331 CE1 PHE L 40 38.131 19.873 81.558 1.00 1.21 \ ATOM 332 CE2 PHE L 40 40.503 20.200 81.439 1.00 1.21 \ ATOM 333 CZ PHE L 40 39.231 20.673 81.738 1.00 1.21 \ ATOM 334 N TRP L 41 41.436 17.597 77.900 1.00 1.21 \ ATOM 335 CA TRP L 41 42.306 18.596 77.304 1.00 1.21 \ ATOM 336 C TRP L 41 42.115 18.884 75.812 1.00 1.21 \ ATOM 337 O TRP L 41 42.225 20.041 75.409 1.00 1.21 \ ATOM 338 CB TRP L 41 43.768 18.234 77.587 1.00 1.21 \ ATOM 339 CG TRP L 41 44.722 19.370 77.438 1.00 1.21 \ ATOM 340 CD1 TRP L 41 45.666 19.526 76.467 1.00 1.21 \ ATOM 341 CD2 TRP L 41 44.855 20.506 78.300 1.00 1.21 \ ATOM 342 NE1 TRP L 41 46.376 20.679 76.667 1.00 1.21 \ ATOM 343 CE2 TRP L 41 45.896 21.299 77.790 1.00 1.21 \ ATOM 344 CE3 TRP L 41 44.196 20.917 79.468 1.00 1.21 \ ATOM 345 CZ2 TRP L 41 46.296 22.488 78.401 1.00 1.21 \ ATOM 346 CZ3 TRP L 41 44.598 22.099 80.078 1.00 1.21 \ ATOM 347 CH2 TRP L 41 45.636 22.870 79.546 1.00 1.21 \ ATOM 348 N ILE L 42 41.800 17.861 75.007 1.00 -1.34 \ ATOM 349 CA ILE L 42 41.624 18.075 73.559 1.00 -1.34 \ ATOM 350 C ILE L 42 40.632 19.186 73.212 1.00 -1.34 \ ATOM 351 O ILE L 42 40.947 20.077 72.413 1.00 -1.34 \ ATOM 352 CB ILE L 42 41.265 16.769 72.773 1.00 -1.34 \ ATOM 353 CG1 ILE L 42 40.124 15.996 73.454 1.00 -1.34 \ ATOM 354 CG2 ILE L 42 42.501 15.911 72.600 1.00 -1.34 \ ATOM 355 CD1 ILE L 42 39.696 14.725 72.729 1.00 -1.34 \ ATOM 356 N SER L 43 39.481 19.183 73.879 1.00 -1.06 \ ATOM 357 CA SER L 43 38.492 20.214 73.621 1.00 -1.06 \ ATOM 358 C SER L 43 38.763 21.481 74.412 1.00 -1.06 \ ATOM 359 O SER L 43 38.540 22.586 73.909 1.00 -1.06 \ ATOM 360 CB SER L 43 37.095 19.692 73.924 1.00 -1.06 \ ATOM 361 OG SER L 43 36.813 18.563 73.113 1.00 -1.06 \ ATOM 362 N TYR L 44 39.263 21.306 75.636 1.00 1.21 \ ATOM 363 CA TYR L 44 39.568 22.422 76.538 1.00 1.21 \ ATOM 364 C TYR L 44 40.676 23.354 76.036 1.00 1.21 \ ATOM 365 O TYR L 44 40.565 24.580 76.138 1.00 1.21 \ ATOM 366 CB TYR L 44 39.938 21.880 77.922 1.00 1.21 \ ATOM 367 CG TYR L 44 40.170 22.929 78.972 1.00 1.21 \ ATOM 368 CD1 TYR L 44 39.106 23.651 79.506 1.00 1.21 \ ATOM 369 CD2 TYR L 44 41.448 23.203 79.440 1.00 1.21 \ ATOM 370 CE1 TYR L 44 39.308 24.633 80.492 1.00 1.21 \ ATOM 371 CE2 TYR L 44 41.665 24.190 80.426 1.00 1.21 \ ATOM 372 CZ TYR L 44 40.585 24.900 80.945 1.00 1.21 \ ATOM 373 OH TYR L 44 40.782 25.865 81.908 1.00 1.21 \ """, "e2aerL3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2aerL3_csv", state=0, origin=1) cmd.zoom("e2aerL3_csv", animate=-1)