cmd.read_pdbstr("""\ ATOM 1 N ARG j5007 32.982 -26.153 -36.629 1.00 -1.00 \ ATOM 2 CA ARG j5007 32.513 -27.549 -36.902 1.00 -1.00 \ ATOM 3 C ARG j5007 31.178 -27.851 -36.190 1.00 -1.00 \ ATOM 4 O ARG j5007 30.109 -27.832 -36.825 1.00 -1.00 \ ATOM 5 CB ARG j5007 33.582 -28.564 -36.480 1.00 -1.00 \ ATOM 6 N ILE j5008 31.234 -28.123 -34.881 1.00 0.67 \ ATOM 7 CA ILE j5008 30.019 -28.421 -34.098 1.00 0.67 \ ATOM 8 C ILE j5008 29.271 -27.119 -33.774 1.00 0.67 \ ATOM 9 O ILE j5008 29.809 -26.228 -33.115 1.00 0.67 \ ATOM 10 CB ILE j5008 30.341 -29.147 -32.769 1.00 0.67 \ ATOM 11 CG1 ILE j5008 31.217 -30.392 -33.018 1.00 0.67 \ ATOM 12 CG2 ILE j5008 29.042 -29.531 -32.095 1.00 0.67 \ ATOM 13 CD1 ILE j5008 32.721 -30.095 -33.222 1.00 0.67 \ ATOM 14 N PRO j5009 28.009 -27.003 -34.243 1.00 0.67 \ ATOM 15 CA PRO j5009 27.172 -25.814 -34.021 1.00 0.67 \ ATOM 16 C PRO j5009 26.962 -25.420 -32.544 1.00 0.67 \ ATOM 17 O PRO j5009 27.045 -26.258 -31.645 1.00 0.67 \ ATOM 18 CB PRO j5009 25.858 -26.195 -34.715 1.00 0.67 \ ATOM 19 CG PRO j5009 26.291 -27.161 -35.795 1.00 0.67 \ ATOM 20 CD PRO j5009 27.278 -28.008 -35.046 1.00 0.67 \ ATOM 21 N LEU j5010 26.698 -24.148 -32.285 1.00 0.67 \ ATOM 22 CA LEU j5010 26.457 -23.730 -30.904 1.00 0.67 \ ATOM 23 C LEU j5010 25.144 -24.372 -30.470 1.00 0.67 \ ATOM 24 O LEU j5010 25.129 -25.150 -29.512 1.00 0.67 \ ATOM 25 CB LEU j5010 26.342 -22.203 -30.786 1.00 0.67 \ ATOM 26 N TRP j5011 24.058 -24.061 -31.194 1.00 0.67 \ ATOM 27 CA TRP j5011 22.724 -24.599 -30.896 1.00 0.67 \ ATOM 28 C TRP j5011 22.673 -26.135 -30.746 1.00 0.67 \ ATOM 29 O TRP j5011 21.620 -26.701 -30.439 1.00 0.67 \ ATOM 30 CB TRP j5011 21.708 -24.174 -31.963 1.00 0.67 \ ATOM 31 CG TRP j5011 21.663 -25.090 -33.162 1.00 0.67 \ ATOM 32 CD1 TRP j5011 22.536 -25.105 -34.204 1.00 0.67 \ ATOM 33 CD2 TRP j5011 20.687 -26.119 -33.438 1.00 0.67 \ ATOM 34 NE1 TRP j5011 22.170 -26.065 -35.111 1.00 0.67 \ ATOM 35 CE2 TRP j5011 21.037 -26.704 -34.669 1.00 0.67 \ ATOM 36 CE3 TRP j5011 19.554 -26.600 -32.765 1.00 0.67 \ ATOM 37 CZ2 TRP j5011 20.288 -27.752 -35.252 1.00 0.67 \ ATOM 38 CZ3 TRP j5011 18.814 -27.640 -33.346 1.00 0.67 \ ATOM 39 CH2 TRP j5011 19.187 -28.197 -34.574 1.00 0.67 \ ATOM 40 N ILE j5012 23.790 -26.808 -30.986 1.00 -1.07 \ ATOM 41 CA ILE j5012 23.815 -28.250 -30.816 1.00 -1.07 \ ATOM 42 C ILE j5012 24.769 -28.624 -29.672 1.00 -1.07 \ ATOM 43 O ILE j5012 24.669 -29.691 -29.084 1.00 -1.07 \ ATOM 44 CB ILE j5012 24.193 -28.949 -32.125 1.00 -1.07 \ ATOM 45 CG1 ILE j5012 23.037 -28.791 -33.124 1.00 -1.07 \ ATOM 46 CG2 ILE j5012 24.555 -30.420 -31.854 1.00 -1.07 \ ATOM 47 CD1 ILE j5012 23.203 -29.609 -34.406 1.00 -1.07 \ ATOM 48 N VAL j5013 25.693 -27.737 -29.353 1.00 0.67 \ ATOM 49 CA VAL j5013 26.588 -27.989 -28.238 1.00 0.67 \ ATOM 50 C VAL j5013 25.750 -27.646 -27.004 1.00 0.67 \ ATOM 51 O VAL j5013 25.839 -28.303 -25.972 1.00 0.67 \ ATOM 52 CB VAL j5013 27.837 -27.048 -28.280 1.00 0.67 \ ATOM 53 CG1 VAL j5013 28.380 -26.815 -26.880 1.00 0.67 \ ATOM 54 CG2 VAL j5013 28.922 -27.663 -29.149 1.00 0.67 \ ATOM 55 N ALA j5014 24.925 -26.614 -27.136 1.00 0.67 \ ATOM 56 CA ALA j5014 24.104 -26.144 -26.028 1.00 0.67 \ ATOM 57 C ALA j5014 23.137 -27.208 -25.603 1.00 0.67 \ ATOM 58 O ALA j5014 23.373 -27.916 -24.615 1.00 0.67 \ ATOM 59 CB ALA j5014 23.353 -24.904 -26.422 1.00 0.67 \ ATOM 60 N THR j5015 22.046 -27.304 -26.358 1.00 0.67 \ ATOM 61 CA THR j5015 20.992 -28.271 -26.098 1.00 0.67 \ ATOM 62 C THR j5015 21.523 -29.606 -25.587 1.00 0.67 \ ATOM 63 O THR j5015 20.951 -30.169 -24.661 1.00 0.67 \ ATOM 64 CB THR j5015 20.160 -28.521 -27.363 1.00 0.67 \ ATOM 65 OG1 THR j5015 21.043 -28.851 -28.441 1.00 0.67 \ ATOM 66 CG2 THR j5015 19.355 -27.279 -27.742 1.00 0.67 \ ATOM 67 N VAL j5016 22.600 -30.119 -26.179 1.00 0.67 \ ATOM 68 CA VAL j5016 23.156 -31.391 -25.703 1.00 0.67 \ ATOM 69 C VAL j5016 23.521 -31.234 -24.230 1.00 0.67 \ ATOM 70 O VAL j5016 22.982 -31.938 -23.381 1.00 0.67 \ ATOM 71 CB VAL j5016 24.427 -31.823 -26.498 1.00 0.67 \ ATOM 72 CG1 VAL j5016 25.138 -33.000 -25.789 1.00 0.67 \ ATOM 73 CG2 VAL j5016 24.031 -32.220 -27.912 1.00 0.67 \ ATOM 74 N ALA j5017 24.433 -30.306 -23.944 1.00 0.67 \ ATOM 75 CA ALA j5017 24.875 -30.030 -22.581 1.00 0.67 \ ATOM 76 C ALA j5017 23.677 -29.657 -21.716 1.00 0.67 \ ATOM 77 O ALA j5017 23.553 -30.151 -20.584 1.00 0.67 \ ATOM 78 CB ALA j5017 25.883 -28.903 -22.575 1.00 0.67 \ ATOM 79 N GLY j5018 22.815 -28.778 -22.247 1.00 0.67 \ ATOM 80 CA GLY j5018 21.610 -28.358 -21.541 1.00 0.67 \ ATOM 81 C GLY j5018 20.854 -29.574 -21.029 1.00 0.67 \ ATOM 82 O GLY j5018 20.789 -29.803 -19.826 1.00 0.67 \ ATOM 83 N MET j5019 20.289 -30.357 -21.944 1.00 -1.07 \ ATOM 84 CA MET j5019 19.568 -31.580 -21.574 1.00 -1.07 \ ATOM 85 C MET j5019 20.453 -32.420 -20.657 1.00 -1.07 \ ATOM 86 O MET j5019 19.961 -33.186 -19.819 1.00 -1.07 \ ATOM 87 CB MET j5019 19.268 -32.446 -22.800 1.00 -1.07 \ ATOM 88 CG MET j5019 18.359 -31.839 -23.858 1.00 -1.07 \ ATOM 89 SD MET j5019 18.233 -32.955 -25.311 1.00 -1.07 \ ATOM 90 CE MET j5019 19.800 -32.534 -26.174 1.00 -1.07 \ ATOM 91 N GLY j5020 21.760 -32.290 -20.854 1.00 0.67 \ ATOM 92 CA GLY j5020 22.712 -33.038 -20.064 1.00 0.67 \ ATOM 93 C GLY j5020 22.555 -32.703 -18.606 1.00 0.67 \ ATOM 94 O GLY j5020 22.288 -33.587 -17.795 1.00 0.67 \ ATOM 95 N VAL j5021 22.708 -31.428 -18.272 1.00 -1.06 \ ATOM 96 CA VAL j5021 22.590 -30.995 -16.887 1.00 -1.06 \ ATOM 97 C VAL j5021 21.190 -31.217 -16.324 1.00 -1.06 \ ATOM 98 O VAL j5021 21.027 -31.420 -15.133 1.00 -1.06 \ ATOM 99 CB VAL j5021 23.015 -29.524 -16.759 1.00 -1.06 \ ATOM 100 CG1 VAL j5021 22.775 -29.024 -15.349 1.00 -1.06 \ ATOM 101 CG2 VAL j5021 24.507 -29.399 -17.134 1.00 -1.06 \ ATOM 102 N ILE j5022 20.187 -31.195 -17.185 1.00 -1.07 \ ATOM 103 CA ILE j5022 18.820 -31.443 -16.751 1.00 -1.07 \ ATOM 104 C ILE j5022 18.761 -32.868 -16.232 1.00 -1.07 \ ATOM 105 O ILE j5022 17.938 -33.196 -15.388 1.00 -1.07 \ ATOM 106 CB ILE j5022 17.821 -31.334 -17.908 1.00 -1.07 \ ATOM 107 CG1 ILE j5022 17.907 -29.942 -18.546 1.00 -1.07 \ ATOM 108 CG2 ILE j5022 16.428 -31.629 -17.419 1.00 -1.07 \ ATOM 109 CD1 ILE j5022 17.673 -28.797 -17.598 1.00 -1.07 \ ATOM 110 N VAL j5023 19.636 -33.721 -16.739 1.00 -2.12 \ ATOM 111 CA VAL j5023 19.664 -35.117 -16.298 1.00 -2.12 \ ATOM 112 C VAL j5023 20.354 -35.273 -14.951 1.00 -2.12 \ ATOM 113 O VAL j5023 19.772 -35.813 -14.023 1.00 -2.12 \ ATOM 114 CB VAL j5023 20.373 -36.026 -17.330 1.00 -2.12 \ ATOM 115 CG1 VAL j5023 20.447 -37.447 -16.807 1.00 -2.12 \ ATOM 116 CG2 VAL j5023 19.617 -36.001 -18.651 1.00 -2.12 \ ATOM 117 N ILE j5024 21.594 -34.808 -14.852 1.00 -2.11 \ ATOM 118 CA ILE j5024 22.342 -34.905 -13.608 1.00 -2.11 \ ATOM 119 C ILE j5024 21.564 -34.225 -12.478 1.00 -2.11 \ ATOM 120 O ILE j5024 21.471 -34.763 -11.380 1.00 -2.11 \ ATOM 121 CB ILE j5024 23.748 -34.261 -13.725 1.00 -2.11 \ ATOM 122 CG1 ILE j5024 24.563 -34.595 -12.466 1.00 -2.11 \ ATOM 123 CG2 ILE j5024 23.622 -32.745 -13.897 1.00 -2.11 \ ATOM 124 CD1 ILE j5024 26.037 -34.262 -12.548 1.00 -2.11 \ ATOM 125 N VAL j5025 21.006 -33.049 -12.759 1.00 -1.09 \ ATOM 126 CA VAL j5025 20.214 -32.304 -11.776 1.00 -1.09 \ ATOM 127 C VAL j5025 18.880 -33.013 -11.526 1.00 -1.09 \ ATOM 128 O VAL j5025 18.187 -32.750 -10.537 1.00 -1.09 \ ATOM 129 CB VAL j5025 19.973 -30.850 -12.242 1.00 -1.09 \ ATOM 130 CG1 VAL j5025 18.834 -30.217 -11.476 1.00 -1.09 \ ATOM 131 CG2 VAL j5025 21.243 -30.044 -12.029 1.00 -1.09 \ ATOM 132 N GLY j5026 18.527 -33.925 -12.422 1.00 0.67 \ ATOM 133 CA GLY j5026 17.306 -34.685 -12.229 1.00 0.67 \ ATOM 134 C GLY j5026 17.625 -35.904 -11.368 1.00 0.67 \ ATOM 135 O GLY j5026 16.832 -36.287 -10.501 1.00 0.67 \ ATOM 136 N LEU j5027 18.785 -36.514 -11.616 1.00 -1.07 \ ATOM 137 CA LEU j5027 19.224 -37.689 -10.872 1.00 -1.07 \ ATOM 138 C LEU j5027 19.311 -37.283 -9.417 1.00 -1.07 \ ATOM 139 O LEU j5027 19.078 -38.094 -8.501 1.00 -1.07 \ ATOM 140 CB LEU j5027 20.600 -38.138 -11.341 1.00 -1.07 \ ATOM 141 CG LEU j5027 21.168 -39.260 -10.476 1.00 -1.07 \ ATOM 142 CD1 LEU j5027 20.343 -40.510 -10.683 1.00 -1.07 \ ATOM 143 CD2 LEU j5027 22.620 -39.508 -10.828 1.00 -1.07 \ ATOM 144 N PHE j5028 19.675 -36.016 -9.220 1.00 0.67 \ ATOM 145 CA PHE j5028 19.797 -35.442 -7.884 1.00 0.67 \ ATOM 146 C PHE j5028 18.395 -35.392 -7.269 1.00 0.67 \ ATOM 147 O PHE j5028 18.172 -35.944 -6.201 1.00 0.67 \ ATOM 148 CB PHE j5028 20.441 -34.038 -7.959 1.00 0.67 \ ATOM 149 CG PHE j5028 21.922 -34.056 -8.291 1.00 0.67 \ ATOM 150 CD1 PHE j5028 22.719 -35.149 -7.939 1.00 0.67 \ ATOM 151 CD2 PHE j5028 22.525 -32.963 -8.891 1.00 0.67 \ ATOM 152 CE1 PHE j5028 24.081 -35.150 -8.175 1.00 0.67 \ ATOM 153 CE2 PHE j5028 23.891 -32.955 -9.128 1.00 0.67 \ ATOM 154 CZ PHE j5028 24.671 -34.056 -8.766 1.00 0.67 \ ATOM 155 N PHE j5029 17.459 -34.763 -7.974 1.00 0.67 \ ATOM 156 CA PHE j5029 16.086 -34.657 -7.507 1.00 0.67 \ ATOM 157 C PHE j5029 15.432 -36.003 -7.230 1.00 0.67 \ ATOM 158 O PHE j5029 14.479 -36.101 -6.458 1.00 0.67 \ ATOM 159 CB PHE j5029 15.253 -33.870 -8.506 1.00 0.67 \ ATOM 160 CG PHE j5029 14.887 -32.509 -8.016 1.00 0.67 \ ATOM 161 CD1 PHE j5029 13.745 -32.326 -7.255 1.00 0.67 \ ATOM 162 CD2 PHE j5029 15.745 -31.424 -8.217 1.00 0.67 \ ATOM 163 CE1 PHE j5029 13.460 -31.079 -6.686 1.00 0.67 \ ATOM 164 CE2 PHE j5029 15.475 -30.174 -7.656 1.00 0.67 \ ATOM 165 CZ PHE j5029 14.330 -29.998 -6.885 1.00 0.67 \ ATOM 166 N TYR j5030 15.922 -37.047 -7.863 1.00 0.67 \ ATOM 167 CA TYR j5030 15.347 -38.336 -7.585 1.00 0.67 \ ATOM 168 C TYR j5030 15.932 -38.745 -6.256 1.00 0.67 \ ATOM 169 O TYR j5030 15.231 -39.247 -5.385 1.00 0.67 \ ATOM 170 CB TYR j5030 15.748 -39.357 -8.636 1.00 0.67 \ ATOM 171 CG TYR j5030 15.719 -40.784 -8.115 1.00 0.67 \ ATOM 172 CD1 TYR j5030 14.512 -41.499 -8.018 1.00 0.67 \ ATOM 173 CD2 TYR j5030 16.908 -41.423 -7.705 1.00 0.67 \ ATOM 174 CE1 TYR j5030 14.496 -42.820 -7.524 1.00 0.67 \ ATOM 175 CE2 TYR j5030 16.900 -42.728 -7.219 1.00 0.67 \ ATOM 176 CZ TYR j5030 15.698 -43.423 -7.127 1.00 0.67 \ ATOM 177 OH TYR j5030 15.724 -44.707 -6.625 1.00 0.67 \ ATOM 178 N GLY j5031 17.226 -38.518 -6.097 1.00 0.67 \ ATOM 179 CA GLY j5031 17.900 -38.911 -4.866 1.00 0.67 \ ATOM 180 C GLY j5031 17.247 -38.467 -3.563 1.00 0.67 \ ATOM 181 O GLY j5031 17.497 -39.030 -2.492 1.00 0.67 \ ATOM 182 N ALA j5032 16.406 -37.446 -3.675 1.00 -1.00 \ ATOM 183 CA ALA j5032 15.708 -36.883 -2.530 1.00 -1.00 \ ATOM 184 C ALA j5032 14.876 -37.965 -1.858 1.00 -1.00 \ ATOM 185 O ALA j5032 14.803 -38.017 -0.624 1.00 -1.00 \ ATOM 186 CB ALA j5032 14.814 -35.737 -2.981 1.00 -1.00 \ ATOM 187 N TYR j5033 14.233 -38.803 -2.669 1.00 -1.00 \ ATOM 188 CA TYR j5033 13.426 -39.911 -2.170 1.00 -1.00 \ ATOM 189 C TYR j5033 14.400 -41.044 -2.375 1.00 -1.00 \ ATOM 190 O TYR j5033 15.289 -40.922 -3.211 1.00 -1.00 \ ATOM 191 CB TYR j5033 12.202 -40.087 -3.049 1.00 -1.00 \ ATOM 192 CG TYR j5033 11.601 -38.749 -3.433 1.00 -1.00 \ ATOM 193 CD1 TYR j5033 10.495 -38.241 -2.762 1.00 -1.00 \ ATOM 194 CD2 TYR j5033 12.177 -37.961 -4.438 1.00 -1.00 \ ATOM 195 CE1 TYR j5033 9.977 -36.983 -3.075 1.00 -1.00 \ ATOM 196 CE2 TYR j5033 11.663 -36.704 -4.759 1.00 -1.00 \ ATOM 197 CZ TYR j5033 10.557 -36.219 -4.070 1.00 -1.00 \ ATOM 198 OH TYR j5033 10.013 -34.985 -4.368 1.00 -1.00 \ ATOM 199 N ALA j5034 14.277 -42.116 -1.607 1.00 -1.00 \ ATOM 200 CA ALA j5034 15.182 -43.264 -1.741 1.00 -1.00 \ ATOM 201 C ALA j5034 16.612 -43.033 -1.217 1.00 -1.00 \ ATOM 202 O ALA j5034 17.192 -43.880 -0.514 1.00 -1.00 \ ATOM 203 CB ALA j5034 15.238 -43.705 -3.198 1.00 -1.00 \ ATOM 204 N GLY j5035 17.184 -41.891 -1.560 1.00 -1.00 \ ATOM 205 CA GLY j5035 18.539 -41.612 -1.105 1.00 -1.00 \ ATOM 206 C GLY j5035 18.748 -41.806 0.398 1.00 -1.00 \ ATOM 207 O GLY j5035 17.898 -42.356 1.120 1.00 -1.00 \ ATOM 208 N LEU j5036 19.911 -41.372 0.861 1.00 -1.00 \ ATOM 209 CA LEU j5036 20.196 -41.441 2.276 1.00 -1.00 \ ATOM 210 C LEU j5036 19.410 -40.276 2.870 1.00 -1.00 \ ATOM 211 O LEU j5036 18.934 -40.340 4.003 1.00 -1.00 \ ATOM 212 CB LEU j5036 21.682 -41.236 2.555 1.00 -1.00 \ ATOM 213 CG LEU j5036 22.574 -42.469 2.555 1.00 -1.00 \ ATOM 214 CD1 LEU j5036 23.970 -42.061 3.023 1.00 -1.00 \ ATOM 215 CD2 LEU j5036 22.003 -43.530 3.484 1.00 -1.00 \ ATOM 216 N GLY j5037 19.276 -39.212 2.088 1.00 -1.00 \ ATOM 217 CA GLY j5037 18.550 -38.037 2.537 1.00 -1.00 \ ATOM 218 C GLY j5037 17.060 -38.264 2.478 1.00 -1.00 \ ATOM 219 O GLY j5037 16.273 -37.332 2.651 1.00 -1.00 \ ATOM 220 N SER j5038 16.678 -39.507 2.209 1.00 -1.00 \ ATOM 221 CA SER j5038 15.271 -39.856 2.158 1.00 -1.00 \ ATOM 222 C SER j5038 14.755 -39.800 3.577 1.00 -1.00 \ ATOM 223 O SER j5038 15.514 -39.502 4.513 1.00 -1.00 \ ATOM 224 CB SER j5038 15.062 -41.267 1.644 1.00 -1.00 \ ATOM 225 OG SER j5038 13.723 -41.654 1.927 1.00 -1.00 \ ATOM 226 N SER j5039 13.472 -40.074 3.759 1.00 -1.00 \ ATOM 227 CA SER j5039 12.930 -40.062 5.120 1.00 -1.00 \ ATOM 228 C SER j5039 12.459 -41.475 5.442 1.00 -1.00 \ ATOM 229 O SER j5039 11.543 -41.689 6.237 1.00 -1.00 \ ATOM 230 CB SER j5039 11.773 -39.077 5.220 1.00 -1.00 \ ATOM 231 OG SER j5039 10.826 -39.331 4.193 1.00 -1.00 \ ATOM 232 N LEU j5040 13.110 -42.444 4.809 1.00 -1.00 \ ATOM 233 CA LEU j5040 12.792 -43.861 5.003 1.00 -1.00 \ ATOM 234 C LEU j5040 14.052 -44.756 5.302 1.00 -1.00 \ ATOM 235 O LEU j5040 14.892 -44.348 6.135 1.00 -1.00 \ ATOM 236 CB LEU j5040 12.046 -44.331 3.738 1.00 -1.00 \ ATOM 237 CG LEU j5040 10.796 -43.509 3.455 1.00 -1.00 \ ATOM 238 CD1 LEU j5040 10.268 -43.827 2.086 1.00 -1.00 \ ATOM 239 CD2 LEU j5040 9.770 -43.800 4.539 1.00 -1.00 \ ATOM 240 OXT LEU j5040 14.118 -45.837 4.677 1.00 -1.00 \ """, "e2axtj1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2axtj1_csv", state=0, origin=1) cmd.zoom("e2axtj1_csv", animate=-1)