cmd.read_pdbstr("""\ ATOM 1 CA VAL L1001 40.846 106.918 31.060 1.00 -1.00 \ ATOM 2 CA ASP L1002 38.317 104.625 32.710 1.00 -1.00 \ ATOM 3 CA LYS L1003 37.453 106.253 36.031 1.00 -1.00 \ ATOM 4 CA ARG L1004 37.426 104.247 39.264 1.00 -1.00 \ ATOM 5 CA GLU L1005 36.320 105.642 42.618 1.00 -1.00 \ ATOM 6 CA SER L1006 39.373 104.255 44.401 1.00 -1.00 \ ATOM 7 CA TYR L1007 42.958 103.171 43.739 1.00 0.79 \ ATOM 8 CA THR L1008 45.305 100.822 45.554 1.00 -0.12 \ ATOM 9 CA LYS L1009 48.963 101.333 46.459 1.00 -0.73 \ ATOM 10 CA GLU L1010 49.859 99.226 43.394 1.00 -0.85 \ ATOM 11 CA ASP L1011 47.891 101.579 41.166 1.00 -0.53 \ ATOM 12 CA LEU L1012 49.641 104.620 42.664 1.00 3.76 \ ATOM 13 CA LEU L1013 53.013 102.929 42.033 1.00 -0.69 \ ATOM 14 CA ALA L1014 51.989 102.090 38.442 1.00 0.09 \ ATOM 15 CA SER L1015 51.029 105.771 38.088 1.00 -0.68 \ ATOM 16 CA GLY L1016 54.587 106.857 38.955 1.00 -1.00 \ ATOM 17 CA ARG L1017 55.818 104.905 35.942 1.00 -1.00 \ ATOM 18 CA GLY L1018 53.084 106.261 33.714 1.00 -1.00 \ ATOM 19 CA GLU L1019 51.373 102.876 33.510 1.00 -1.00 \ ATOM 20 CA LEU L1020 48.031 103.979 34.981 1.00 -1.00 \ ATOM 21 CA PHE L1021 46.758 106.821 32.750 1.00 -1.00 \ ATOM 22 CA GLY L1022 48.971 106.089 29.765 1.00 -1.00 \ ATOM 23 CA ALA L1023 51.960 107.922 28.281 1.00 -1.00 \ ATOM 24 CA LYS L1024 50.141 111.221 27.770 1.00 -1.00 \ ATOM 25 CA GLY L1025 48.676 111.333 31.272 1.00 -1.00 \ ATOM 26 CA PRO L1026 50.422 112.797 34.346 1.00 -1.00 \ ATOM 27 CA GLN L1027 52.573 110.736 36.713 1.00 0.49 \ ATOM 28 CA LEU L1028 52.533 110.742 40.489 1.00 0.35 \ ATOM 29 CA PRO L1029 55.990 110.987 42.114 1.00 0.53 \ ATOM 30 CA ALA L1030 57.561 107.621 42.961 1.00 -0.32 \ ATOM 31 CA PRO L1031 58.897 106.664 46.392 1.00 -0.52 \ ATOM 32 CA ASN L1032 60.254 108.303 48.307 1.00 -0.01 \ ATOM 33 CA MET L1033 58.217 111.323 47.145 1.00 0.99 \ ATOM 34 CA LEU L1034 54.889 109.445 46.836 1.00 -0.75 \ ATOM 35 CA MET L1035 52.930 110.649 49.869 1.00 0.53 \ ATOM 36 CA MET L1036 49.832 108.428 49.924 1.00 2.24 \ ATOM 37 CA ASP L1037 49.214 104.664 50.023 1.00 1.96 \ ATOM 38 CA ARG L1038 45.739 104.646 48.517 1.00 0.02 \ ATOM 39 CA VAL L1039 42.928 106.820 47.229 1.00 1.97 \ ATOM 40 CA VAL L1040 39.774 105.794 49.063 1.00 -0.62 \ ATOM 41 CA LYS L1041 37.267 107.961 47.155 1.00 -0.88 \ ATOM 42 CA MET L1042 37.203 110.109 44.016 1.00 -0.68 \ ATOM 43 CA THR L1043 34.043 111.860 42.785 1.00 -0.75 \ ATOM 44 CA GLU L1044 33.183 114.491 40.170 1.00 -0.95 \ ATOM 45 CA THR L1045 30.547 116.054 42.378 1.00 -1.00 \ ATOM 46 CA GLY L1046 30.610 116.333 46.147 1.00 -1.00 \ ATOM 47 CA GLY L1047 33.133 118.049 48.377 1.00 -1.00 \ ATOM 48 CA ASN L1048 32.496 121.393 50.105 1.00 -1.00 \ ATOM 49 CA PHE L1049 31.729 123.136 46.781 1.00 -1.00 \ ATOM 50 CA ASP L1050 29.907 120.246 45.087 1.00 -1.00 \ ATOM 51 CA LYS L1051 32.535 120.357 42.313 1.00 -0.81 \ ATOM 52 CA GLY L1052 34.705 117.348 43.115 1.00 -0.73 \ ATOM 53 CA TYR L1053 36.163 115.418 46.016 1.00 -0.95 \ ATOM 54 CA VAL L1054 39.165 113.216 46.723 1.00 1.35 \ ATOM 55 CA GLU L1055 40.000 111.391 49.945 1.00 -0.58 \ ATOM 56 CA ALA L1056 43.313 109.494 50.307 1.00 2.04 \ ATOM 57 CA GLU L1057 45.301 107.911 53.139 1.00 -0.56 \ ATOM 58 CA LEU L1058 48.888 107.367 54.212 1.00 -0.04 \ ATOM 59 CA ASP L1059 49.650 104.641 56.732 1.00 -0.96 \ ATOM 60 CA ILE L1060 52.039 105.750 59.433 1.00 1.12 \ ATOM 61 CA ASN L1061 54.729 103.544 61.051 1.00 -0.24 \ ATOM 62 CA PRO L1062 57.867 104.586 63.016 1.00 -1.09 \ ATOM 63 CA ASP L1063 60.211 103.347 60.281 1.00 0.23 \ ATOM 64 CA LEU L1064 59.220 105.765 57.516 1.00 0.14 \ ATOM 65 CA TRP L1065 62.424 107.429 56.264 1.00 -0.85 \ ATOM 66 CA PHE L1066 61.540 111.022 57.175 1.00 -0.13 \ ATOM 67 CA PHE L1067 61.208 110.257 60.906 1.00 1.02 \ ATOM 68 CA GLY L1068 64.913 109.479 61.055 1.00 -0.88 \ ATOM 69 CA CYS L1069 66.168 112.862 59.839 1.00 0.17 \ ATOM 70 CA HIS L1070 63.350 115.271 60.664 1.00 -0.23 \ ATOM 71 CA PHE L1071 64.528 115.665 63.331 1.00 -0.66 \ ATOM 72 CA ILE L1072 67.182 113.482 65.015 1.00 -0.84 \ ATOM 73 CA GLY L1073 65.717 112.742 68.442 1.00 -0.44 \ ATOM 74 CA ASP L1074 62.487 114.643 67.676 1.00 -0.93 \ ATOM 75 CA PRO L1075 60.683 112.739 64.879 1.00 -0.59 \ ATOM 76 CA VAL L1076 57.819 114.592 63.203 1.00 -0.38 \ ATOM 77 CA MET L1077 56.599 114.222 59.617 1.00 1.07 \ ATOM 78 CA PRO L1078 57.693 117.271 57.542 1.00 3.66 \ ATOM 79 CA GLY L1079 54.699 119.541 56.918 1.00 -0.56 \ ATOM 80 CA CYS L1080 55.962 120.225 53.388 1.00 0.49 \ ATOM 81 CA LEU L1081 55.410 116.551 52.534 1.00 0.62 \ ATOM 82 CA GLY L1082 51.741 116.559 53.609 1.00 0.10 \ ATOM 83 CA LEU L1083 51.396 119.698 51.510 1.00 0.58 \ ATOM 84 CA ASP L1084 52.976 117.930 48.527 1.00 3.37 \ ATOM 85 CA ALA L1085 50.518 115.055 48.929 1.00 0.45 \ ATOM 86 CA MET L1086 47.727 117.602 48.404 1.00 0.35 \ ATOM 87 CA TRP L1087 49.326 118.946 45.208 1.00 -0.64 \ ATOM 88 CA GLN L1088 49.846 115.337 44.104 1.00 2.25 \ ATOM 89 CA LEU L1089 46.137 114.544 44.587 1.00 0.94 \ ATOM 90 CA VAL L1090 44.984 117.666 42.697 1.00 0.81 \ ATOM 91 CA GLY L1091 47.235 116.713 39.772 1.00 -0.26 \ ATOM 92 CA PHE L1092 46.167 113.057 39.931 1.00 -0.28 \ ATOM 93 CA TYR L1093 42.491 114.090 39.734 1.00 -0.19 \ ATOM 94 CA LEU L1094 43.160 116.197 36.614 1.00 -0.45 \ ATOM 95 CA GLY L1095 44.669 113.102 34.992 1.00 -0.99 \ ATOM 96 CA TRP L1096 41.705 111.037 36.189 1.00 -1.01 \ ATOM 97 CA LEU L1097 39.421 113.467 34.307 1.00 -1.07 \ ATOM 98 CA GLY L1098 41.451 112.693 31.193 1.00 -1.12 \ ATOM 99 CA GLY L1099 43.828 115.638 31.339 1.00 -1.06 \ ATOM 100 CA GLU L1100 47.102 115.123 29.463 1.00 -0.71 \ ATOM 101 CA GLY L1101 50.511 116.533 30.310 1.00 -1.03 \ ATOM 102 CA LYS L1102 53.324 116.684 32.896 1.00 -1.11 \ ATOM 103 CA GLY L1103 52.174 117.786 36.421 1.00 -0.77 \ ATOM 104 CA ARG L1104 53.596 120.988 37.920 1.00 -0.80 \ ATOM 105 CA ALA L1105 52.426 122.630 41.162 1.00 0.06 \ ATOM 106 CA LEU L1106 51.667 126.319 40.580 1.00 -0.45 \ ATOM 107 CA GLY L1107 51.202 127.442 44.162 1.00 -0.30 \ ATOM 108 CA VAL L1108 48.930 127.706 47.177 1.00 -0.27 \ ATOM 109 CA GLY L1109 47.203 130.424 49.167 1.00 -0.59 \ ATOM 110 CA GLU L1110 47.246 130.147 52.960 1.00 0.01 \ ATOM 111 CA VAL L1111 48.597 126.972 54.604 1.00 0.21 \ ATOM 112 CA LYS L1112 48.181 126.435 58.350 1.00 -0.07 \ ATOM 113 CA PHE L1113 49.819 123.677 60.407 1.00 0.90 \ ATOM 114 CA THR L1114 48.129 123.371 63.818 1.00 -0.45 \ ATOM 115 CA GLY L1115 49.250 119.876 64.800 1.00 -0.41 \ ATOM 116 CA GLN L1116 51.879 117.261 63.977 1.00 -0.74 \ ATOM 117 CA VAL L1117 52.202 113.687 62.761 1.00 2.23 \ ATOM 118 CA LEU L1118 54.288 111.637 65.218 1.00 -0.83 \ ATOM 119 CA PRO L1119 55.670 108.114 64.620 1.00 1.42 \ ATOM 120 CA THR L1120 52.984 106.865 67.019 1.00 -1.00 \ ATOM 121 CA ALA L1121 50.116 108.019 64.768 1.00 0.38 \ ATOM 122 CA LYS L1122 48.464 105.377 62.599 1.00 -0.08 \ ATOM 123 CA LYS L1123 46.797 107.060 59.640 1.00 -0.36 \ ATOM 124 CA VAL L1124 46.972 110.372 57.811 1.00 2.29 \ ATOM 125 CA THR L1125 43.905 111.369 55.832 1.00 -0.70 \ ATOM 126 CA TYR L1126 43.901 113.853 52.936 1.00 0.88 \ ATOM 127 CA ARG L1127 40.680 115.485 51.755 1.00 -0.69 \ ATOM 128 CA ILE L1128 40.570 117.659 48.670 1.00 0.78 \ ATOM 129 CA HIS L1129 37.565 119.909 47.895 1.00 -0.65 \ ATOM 130 CA PHE L1130 37.668 121.205 44.336 1.00 -1.00 \ ATOM 131 CA LYS L1131 36.520 124.716 43.710 1.00 -1.00 \ ATOM 132 CA ARG L1132 37.505 125.038 40.066 1.00 -1.00 \ ATOM 133 CA ILE L1133 38.746 123.005 37.129 1.00 -0.63 \ ATOM 134 CA VAL L1134 39.870 124.279 33.720 1.00 -0.62 \ ATOM 135 CA ASN L1135 40.093 121.381 31.264 1.00 -1.00 \ ATOM 136 CA ARG L1136 40.288 123.180 27.927 1.00 -0.74 \ ATOM 137 CA ARG L1137 43.526 123.825 25.993 1.00 -0.83 \ ATOM 138 CA LEU L1138 44.870 124.600 29.471 1.00 -0.85 \ ATOM 139 CA ILE L1139 44.373 122.036 32.240 1.00 -0.43 \ ATOM 140 CA MET L1140 44.423 123.528 35.738 1.00 -1.00 \ ATOM 141 CA GLY L1141 42.912 122.679 39.123 1.00 -0.41 \ ATOM 142 CA LEU L1142 42.098 124.793 42.168 1.00 -0.82 \ ATOM 143 CA ALA L1143 41.102 123.273 45.509 1.00 0.15 \ ATOM 144 CA ASP L1144 41.149 123.557 49.292 1.00 -0.62 \ ATOM 145 CA GLY L1145 42.751 120.780 51.311 1.00 1.24 \ ATOM 146 CA GLU L1146 42.546 119.227 54.765 1.00 -0.82 \ ATOM 147 CA VAL L1147 44.990 116.898 56.475 1.00 0.81 \ ATOM 148 CA LEU L1148 43.868 114.861 59.472 1.00 -0.79 \ ATOM 149 CA VAL L1149 45.883 112.471 61.634 1.00 -0.12 \ ATOM 150 CA ASP L1150 43.826 109.753 63.295 1.00 0.82 \ ATOM 151 CA GLY L1151 40.611 111.698 62.694 1.00 0.94 \ ATOM 152 CA ARG L1152 41.845 115.084 63.932 1.00 -0.24 \ ATOM 153 CA LEU L1153 42.461 118.042 61.610 1.00 -0.39 \ ATOM 154 CA ILE L1154 46.017 119.341 61.690 1.00 0.83 \ ATOM 155 CA TYR L1155 46.639 121.203 58.397 1.00 0.72 \ ATOM 156 CA THR L1156 44.494 123.254 56.016 1.00 -0.22 \ ATOM 157 CA ALA L1157 45.502 124.724 52.656 1.00 1.28 \ ATOM 158 CA SER L1158 43.437 127.178 50.645 1.00 -1.00 \ ATOM 159 CA ASP L1159 43.648 127.397 46.875 1.00 -0.31 \ ATOM 160 CA LEU L1160 46.085 124.642 46.034 1.00 1.42 \ ATOM 161 CA LYS L1161 46.854 125.154 42.339 1.00 -0.23 \ ATOM 162 CA VAL L1162 48.246 122.598 39.899 1.00 1.14 \ ATOM 163 CA GLY L1163 48.378 122.410 36.117 1.00 0.41 \ ATOM 164 CA LEU L1164 49.290 119.739 33.548 1.00 -1.00 \ ATOM 165 CA PHE L1165 51.656 120.879 30.771 1.00 -1.00 \ ATOM 166 CA GLN L1166 52.654 119.144 27.564 1.00 -1.00 \ ATOM 167 CA ASP L1167 55.496 121.621 27.089 1.00 -1.00 \ ATOM 168 CA THR L1168 57.535 122.653 30.127 1.00 -1.00 \ ATOM 169 CA SER L1169 60.348 124.352 28.195 1.00 -1.00 \ ATOM 170 CA ALA L1170 59.363 127.810 29.444 1.00 -1.00 \ ATOM 171 CA PHE L1171 59.703 126.920 33.153 1.00 -1.00 \ """, "e2cf2L2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2cf2L2_csv", state=0, origin=1) cmd.zoom("e2cf2L2_csv", animate=-1)