cmd.read_pdbstr("""\ ATOM 1 N LEU L 5 46.644 31.544 99.777 1.00 -1.00 \ ATOM 2 CA LEU L 5 45.581 31.079 100.672 1.00 -1.00 \ ATOM 3 C LEU L 5 44.480 30.317 99.925 1.00 -1.00 \ ATOM 4 O LEU L 5 43.718 29.573 100.541 1.00 -1.00 \ ATOM 5 CB LEU L 5 44.999 32.249 101.483 1.00 -1.00 \ ATOM 6 CG LEU L 5 45.217 32.357 103.007 1.00 -1.00 \ ATOM 7 CD1 LEU L 5 46.236 31.373 103.573 1.00 -1.00 \ ATOM 8 CD2 LEU L 5 45.638 33.765 103.323 1.00 -1.00 \ ATOM 33 N LEU L 8 44.917 26.110 99.647 1.00 -1.00 \ ATOM 34 CA LEU L 8 44.859 25.310 100.872 1.00 -1.00 \ ATOM 35 C LEU L 8 43.863 24.153 100.766 1.00 -1.00 \ ATOM 36 O LEU L 8 43.993 23.128 101.452 1.00 -1.00 \ ATOM 37 CB LEU L 8 44.530 26.209 102.076 1.00 -1.00 \ ATOM 38 CG LEU L 8 45.747 26.687 102.872 1.00 -1.00 \ ATOM 39 CD1 LEU L 8 46.678 27.429 101.951 1.00 -1.00 \ ATOM 40 CD2 LEU L 8 45.330 27.538 104.056 1.00 -1.00 \ ATOM 41 N ARG L 9 42.880 24.320 99.888 1.00 -1.00 \ ATOM 42 CA ARG L 9 41.841 23.309 99.660 1.00 -1.00 \ ATOM 43 C ARG L 9 42.368 22.190 98.742 1.00 -1.00 \ ATOM 44 O ARG L 9 43.412 22.332 98.099 1.00 -1.00 \ ATOM 45 CB ARG L 9 40.617 23.963 99.010 1.00 -1.00 \ ATOM 46 CG ARG L 9 40.312 25.382 99.508 1.00 -1.00 \ ATOM 47 CD ARG L 9 40.735 26.446 98.491 1.00 -1.00 \ ATOM 48 NE ARG L 9 40.668 27.802 99.037 1.00 -1.00 \ ATOM 49 CZ ARG L 9 39.555 28.526 99.159 1.00 -1.00 \ ATOM 50 NH1 ARG L 9 38.375 28.042 98.770 1.00 -1.00 \ ATOM 51 NH2 ARG L 9 39.622 29.738 99.702 1.00 -1.00 \ ATOM 52 N PRO L 10 41.707 21.028 98.734 1.00 -0.04 \ ATOM 53 CA PRO L 10 42.165 19.930 97.872 1.00 -0.04 \ ATOM 54 C PRO L 10 41.764 20.174 96.407 1.00 -0.04 \ ATOM 55 O PRO L 10 41.018 21.114 96.100 1.00 -0.04 \ ATOM 56 CB PRO L 10 41.455 18.718 98.459 1.00 -0.04 \ ATOM 57 CG PRO L 10 40.164 19.320 98.974 1.00 -0.04 \ ATOM 58 CD PRO L 10 40.624 20.599 99.632 1.00 -0.04 \ ATOM 59 N GLY L 11 42.273 19.321 95.515 1.00 1.21 \ ATOM 60 CA GLY L 11 41.986 19.454 94.093 1.00 1.21 \ ATOM 61 C GLY L 11 40.511 19.565 93.747 1.00 1.21 \ ATOM 62 O GLY L 11 39.659 18.911 94.359 1.00 1.21 \ ATOM 63 N SER L 12 40.209 20.414 92.771 1.00 0.38 \ ATOM 64 CA SER L 12 38.840 20.587 92.325 1.00 0.38 \ ATOM 65 C SER L 12 38.804 21.104 90.899 1.00 0.38 \ ATOM 66 O SER L 12 39.369 22.157 90.594 1.00 0.38 \ ATOM 67 CB SER L 12 38.080 21.539 93.244 1.00 0.38 \ ATOM 68 OG SER L 12 36.750 21.751 92.778 1.00 0.38 \ ATOM 69 N LEU L 13 38.108 20.375 90.031 1.00 0.13 \ ATOM 70 CA LEU L 13 37.977 20.755 88.630 1.00 0.13 \ ATOM 71 C LEU L 13 37.173 22.056 88.491 1.00 0.13 \ ATOM 72 O LEU L 13 37.519 22.913 87.663 1.00 0.13 \ ATOM 73 CB LEU L 13 37.291 19.635 87.829 1.00 0.13 \ ATOM 74 CG LEU L 13 37.313 19.848 86.303 1.00 0.13 \ ATOM 75 CD1 LEU L 13 38.696 19.488 85.753 1.00 0.13 \ ATOM 76 CD2 LEU L 13 36.243 19.003 85.635 1.00 0.13 \ ATOM 89 N ARG L 15 36.835 24.576 90.740 1.00 0.56 \ ATOM 90 CA ARG L 15 37.623 25.713 91.239 1.00 0.56 \ ATOM 91 C ARG L 15 38.864 26.101 90.395 1.00 0.56 \ ATOM 92 O ARG L 15 39.121 27.274 90.131 1.00 0.56 \ ATOM 93 CB ARG L 15 38.053 25.452 92.701 1.00 0.56 \ ATOM 94 CG ARG L 15 36.909 25.253 93.724 1.00 0.56 \ ATOM 95 CD ARG L 15 37.393 25.380 95.200 1.00 0.56 \ ATOM 96 NE ARG L 15 38.322 24.330 95.646 1.00 0.56 \ ATOM 97 CZ ARG L 15 37.967 23.234 96.321 1.00 0.56 \ ATOM 98 NH1 ARG L 15 36.693 23.010 96.635 1.00 0.56 \ ATOM 99 NH2 ARG L 15 38.889 22.354 96.688 1.00 0.56 \ ATOM 112 N CYS L 17 39.728 24.694 87.101 1.00 1.21 \ ATOM 113 CA CYS L 17 39.559 24.687 85.653 1.00 1.21 \ ATOM 114 C CYS L 17 38.318 25.352 85.099 1.00 1.21 \ ATOM 115 O CYS L 17 38.335 25.853 83.979 1.00 1.21 \ ATOM 116 CB CYS L 17 39.638 23.263 85.130 1.00 1.21 \ ATOM 117 SG CYS L 17 41.119 22.375 85.682 1.00 1.21 \ ATOM 118 N LYS L 18 37.226 25.337 85.850 1.00 0.56 \ ATOM 119 CA LYS L 18 35.991 25.948 85.364 1.00 0.56 \ ATOM 120 C LYS L 18 35.892 27.436 85.729 1.00 0.56 \ ATOM 121 O LYS L 18 35.673 28.290 84.847 1.00 0.56 \ ATOM 122 CB LYS L 18 34.777 25.148 85.863 1.00 0.56 \ ATOM 123 CG LYS L 18 34.710 23.685 85.333 1.00 0.56 \ ATOM 124 CD LYS L 18 34.335 23.606 83.829 1.00 0.56 \ ATOM 125 CE LYS L 18 35.331 22.777 83.002 1.00 0.56 \ ATOM 126 NZ LYS L 18 34.909 22.694 81.567 1.00 0.56 \ ATOM 151 N GLN L 21 41.533 29.102 85.096 1.00 -1.30 \ ATOM 152 CA GLN L 21 42.195 28.405 83.983 1.00 -1.30 \ ATOM 153 C GLN L 21 43.342 27.528 84.507 1.00 -1.30 \ ATOM 154 O GLN L 21 44.326 28.038 85.053 1.00 -1.30 \ ATOM 155 CB GLN L 21 42.738 29.418 82.956 1.00 -1.30 \ ATOM 156 CG GLN L 21 41.667 30.294 82.255 1.00 -1.30 \ ATOM 157 CD GLN L 21 42.261 31.521 81.518 1.00 -1.30 \ ATOM 158 OE1 GLN L 21 41.867 31.841 80.388 1.00 -1.30 \ ATOM 159 NE2 GLN L 21 43.191 32.220 82.176 1.00 -1.30 \ ATOM 160 N CYS L 22 43.225 26.214 84.333 1.00 1.21 \ ATOM 161 CA CYS L 22 44.253 25.298 84.813 1.00 1.21 \ ATOM 162 C CYS L 22 45.207 24.814 83.721 1.00 1.21 \ ATOM 163 O CYS L 22 44.882 24.838 82.541 1.00 1.21 \ ATOM 164 CB CYS L 22 43.617 24.108 85.526 1.00 1.21 \ ATOM 165 SG CYS L 22 42.607 23.035 84.461 1.00 1.21 \ ATOM 166 N SER L 23 46.404 24.412 84.131 1.00 -0.62 \ ATOM 167 CA SER L 23 47.432 23.915 83.224 1.00 -0.62 \ ATOM 168 C SER L 23 47.213 22.443 82.962 1.00 -0.62 \ ATOM 169 O SER L 23 46.419 21.796 83.640 1.00 -0.62 \ ATOM 170 CB SER L 23 48.822 24.078 83.856 1.00 -0.62 \ ATOM 171 OG SER L 23 49.012 23.144 84.917 1.00 -0.62 \ ATOM 172 N PHE L 24 48.017 21.884 82.069 1.00 -0.91 \ ATOM 173 CA PHE L 24 47.903 20.467 81.752 1.00 -0.91 \ ATOM 174 C PHE L 24 48.119 19.604 83.016 1.00 -0.91 \ ATOM 175 O PHE L 24 47.264 18.766 83.345 1.00 -0.91 \ ATOM 176 CB PHE L 24 48.887 20.050 80.627 1.00 -0.91 \ ATOM 177 CG PHE L 24 48.752 18.594 80.219 1.00 -0.91 \ ATOM 178 CD1 PHE L 24 47.586 18.123 79.632 1.00 -0.91 \ ATOM 179 CD2 PHE L 24 49.762 17.682 80.487 1.00 -0.91 \ ATOM 180 CE1 PHE L 24 47.431 16.784 79.332 1.00 -0.91 \ ATOM 181 CE2 PHE L 24 49.598 16.334 80.183 1.00 -0.91 \ ATOM 182 CZ PHE L 24 48.426 15.891 79.608 1.00 -0.91 \ ATOM 207 N ALA L 27 45.433 19.648 85.641 1.00 0.56 \ ATOM 208 CA ALA L 27 44.342 18.824 85.140 1.00 0.56 \ ATOM 209 C ALA L 27 44.750 17.361 85.278 1.00 0.56 \ ATOM 210 O ALA L 27 43.922 16.487 85.571 1.00 0.56 \ ATOM 211 CB ALA L 27 44.076 19.162 83.681 1.00 0.56 \ ATOM 212 N ARG L 28 46.038 17.099 85.095 1.00 0.56 \ ATOM 213 CA ARG L 28 46.529 15.735 85.208 1.00 0.56 \ ATOM 214 C ARG L 28 46.447 15.244 86.650 1.00 0.56 \ ATOM 215 O ARG L 28 46.134 14.073 86.878 1.00 0.56 \ ATOM 216 CB ARG L 28 47.963 15.620 84.717 1.00 0.56 \ ATOM 217 CG ARG L 28 48.293 14.227 84.211 1.00 0.56 \ ATOM 218 CD ARG L 28 49.571 13.696 84.818 1.00 0.56 \ ATOM 219 NE ARG L 28 49.317 13.178 86.157 1.00 0.56 \ ATOM 220 CZ ARG L 28 50.233 13.061 87.114 1.00 0.56 \ ATOM 221 NH1 ARG L 28 51.494 13.427 86.895 1.00 0.56 \ ATOM 222 NH2 ARG L 28 49.879 12.578 88.298 1.00 0.56 \ ATOM 235 N ILE L 30 44.275 16.090 88.717 1.00 0.07 \ ATOM 236 CA ILE L 30 42.837 15.923 88.961 1.00 0.07 \ ATOM 237 C ILE L 30 42.335 14.563 88.419 1.00 0.07 \ ATOM 238 O ILE L 30 41.646 13.813 89.123 1.00 0.07 \ ATOM 239 CB ILE L 30 42.010 17.105 88.334 1.00 0.07 \ ATOM 240 CG1 ILE L 30 42.180 18.380 89.175 1.00 0.07 \ ATOM 241 CG2 ILE L 30 40.519 16.737 88.189 1.00 0.07 \ ATOM 242 CD1 ILE L 30 41.661 19.655 88.534 1.00 0.07 \ ATOM 243 N PHE L 31 42.709 14.234 87.185 1.00 -0.87 \ ATOM 244 CA PHE L 31 42.243 12.990 86.589 1.00 -0.87 \ ATOM 245 C PHE L 31 43.139 11.786 86.867 1.00 -0.87 \ ATOM 246 O PHE L 31 42.655 10.652 86.946 1.00 -0.87 \ ATOM 247 CB PHE L 31 41.962 13.171 85.079 1.00 -0.87 \ ATOM 248 CG PHE L 31 40.797 14.110 84.772 1.00 -0.87 \ ATOM 249 CD1 PHE L 31 39.483 13.693 84.903 1.00 -0.87 \ ATOM 250 CD2 PHE L 31 41.016 15.435 84.416 1.00 -0.87 \ ATOM 251 CE1 PHE L 31 38.431 14.586 84.698 1.00 -0.87 \ ATOM 252 CE2 PHE L 31 39.949 16.310 84.214 1.00 -0.87 \ ATOM 253 CZ PHE L 31 38.662 15.885 84.360 1.00 -0.87 \ ATOM 254 N LYS L 32 44.431 12.037 87.043 1.00 0.56 \ ATOM 255 CA LYS L 32 45.436 11.005 87.327 1.00 0.56 \ ATOM 256 C LYS L 32 45.802 10.059 86.175 1.00 0.56 \ ATOM 257 O LYS L 32 46.984 9.773 85.957 1.00 0.56 \ ATOM 258 CB LYS L 32 45.056 10.238 88.596 1.00 0.56 \ ATOM 259 CG LYS L 32 45.172 11.093 89.850 1.00 0.56 \ ATOM 260 CD LYS L 32 44.343 10.555 91.021 1.00 0.56 \ ATOM 261 CE LYS L 32 44.381 11.539 92.211 1.00 0.56 \ ATOM 262 NZ LYS L 32 43.206 11.434 93.152 1.00 0.56 \ ATOM 263 N ASP L 33 44.807 9.523 85.479 1.00 -1.75 \ ATOM 264 CA ASP L 33 45.065 8.635 84.344 1.00 -1.75 \ ATOM 265 C ASP L 33 45.296 9.531 83.123 1.00 -1.75 \ ATOM 266 O ASP L 33 44.633 10.561 82.945 1.00 -1.75 \ ATOM 267 CB ASP L 33 43.898 7.661 84.128 1.00 -1.75 \ ATOM 268 CG ASP L 33 44.079 6.763 82.899 1.00 -1.75 \ ATOM 269 OD1 ASP L 33 43.142 6.725 82.071 1.00 -1.75 \ ATOM 270 OD2 ASP L 33 45.126 6.081 82.771 1.00 -1.75 \ ATOM 271 N ALA L 34 46.264 9.133 82.309 1.00 -1.36 \ ATOM 272 CA ALA L 34 46.668 9.879 81.130 1.00 -1.36 \ ATOM 273 C ALA L 34 45.618 10.053 80.053 1.00 -1.36 \ ATOM 274 O ALA L 34 45.458 11.143 79.522 1.00 -1.36 \ ATOM 275 CB ALA L 34 47.930 9.235 80.526 1.00 -1.36 \ ATOM 288 N ARG L 36 42.450 9.894 80.389 1.00 -1.61 \ ATOM 289 CA ARG L 36 41.332 10.700 80.895 1.00 -1.61 \ ATOM 290 C ARG L 36 41.632 12.191 80.736 1.00 -1.61 \ ATOM 291 O ARG L 36 40.783 12.974 80.307 1.00 -1.61 \ ATOM 292 CB ARG L 36 41.067 10.403 82.368 1.00 -1.61 \ ATOM 293 CG ARG L 36 40.509 9.044 82.655 1.00 -1.61 \ ATOM 294 CD ARG L 36 40.314 8.947 84.138 1.00 -1.61 \ ATOM 295 NE ARG L 36 39.825 7.642 84.556 1.00 -1.61 \ ATOM 296 CZ ARG L 36 39.442 7.367 85.798 1.00 -1.61 \ ATOM 297 NH1 ARG L 36 39.493 8.309 86.737 1.00 -1.61 \ ATOM 298 NH2 ARG L 36 38.990 6.159 86.095 1.00 -1.61 \ ATOM 299 N THR L 37 42.836 12.572 81.155 1.00 0.60 \ ATOM 300 CA THR L 37 43.339 13.957 81.084 1.00 0.60 \ ATOM 301 C THR L 37 43.386 14.360 79.604 1.00 0.60 \ ATOM 302 O THR L 37 43.034 15.481 79.233 1.00 0.60 \ ATOM 303 CB THR L 37 44.797 14.048 81.623 1.00 0.60 \ ATOM 304 OG1 THR L 37 44.919 13.318 82.859 1.00 0.60 \ ATOM 305 CG2 THR L 37 45.209 15.506 81.828 1.00 0.60 \ ATOM 306 N LYS L 38 43.876 13.422 78.793 1.00 -1.29 \ ATOM 307 CA LYS L 38 44.010 13.562 77.354 1.00 -1.29 \ ATOM 308 C LYS L 38 42.693 14.078 76.787 1.00 -1.29 \ ATOM 309 O LYS L 38 42.619 15.210 76.309 1.00 -1.29 \ ATOM 310 CB LYS L 38 44.348 12.192 76.731 1.00 -1.29 \ ATOM 311 CG LYS L 38 44.553 12.145 75.208 1.00 -1.29 \ ATOM 312 CD LYS L 38 43.935 10.867 74.632 1.00 -1.29 \ ATOM 313 CE LYS L 38 42.439 11.068 74.346 1.00 -1.29 \ ATOM 314 NZ LYS L 38 41.584 9.831 74.457 1.00 -1.29 \ ATOM 315 N LEU L 39 41.638 13.279 76.900 1.00 -1.34 \ ATOM 316 CA LEU L 39 40.393 13.727 76.316 1.00 -1.34 \ ATOM 317 C LEU L 39 39.721 14.937 76.940 1.00 -1.34 \ ATOM 318 O LEU L 39 38.881 15.564 76.291 1.00 -1.34 \ ATOM 319 CB LEU L 39 39.424 12.584 75.971 1.00 -1.34 \ ATOM 320 CG LEU L 39 38.483 11.829 76.894 1.00 -1.34 \ ATOM 321 CD1 LEU L 39 37.229 11.503 76.090 1.00 -1.34 \ ATOM 322 CD2 LEU L 39 39.143 10.539 77.386 1.00 -1.34 \ ATOM 323 N PHE L 40 40.122 15.303 78.159 1.00 1.21 \ ATOM 324 CA PHE L 40 39.567 16.520 78.783 1.00 1.21 \ ATOM 325 C PHE L 40 40.302 17.726 78.185 1.00 1.21 \ ATOM 326 O PHE L 40 39.694 18.653 77.665 1.00 1.21 \ ATOM 327 CB PHE L 40 39.784 16.549 80.306 1.00 1.21 \ ATOM 328 CG PHE L 40 39.680 17.956 80.927 1.00 1.21 \ ATOM 329 CD1 PHE L 40 38.464 18.562 81.134 1.00 1.21 \ ATOM 330 CD2 PHE L 40 40.812 18.655 81.317 1.00 1.21 \ ATOM 331 CE1 PHE L 40 38.387 19.838 81.723 1.00 1.21 \ ATOM 332 CE2 PHE L 40 40.714 19.927 81.898 1.00 1.21 \ ATOM 333 CZ PHE L 40 39.512 20.505 82.097 1.00 1.21 \ ATOM 334 N TRP L 41 41.623 17.677 78.249 1.00 1.21 \ ATOM 335 CA TRP L 41 42.487 18.743 77.774 1.00 1.21 \ ATOM 336 C TRP L 41 42.338 19.021 76.277 1.00 1.21 \ ATOM 337 O TRP L 41 42.395 20.172 75.833 1.00 1.21 \ ATOM 338 CB TRP L 41 43.935 18.390 78.087 1.00 1.21 \ ATOM 339 CG TRP L 41 44.844 19.555 77.931 1.00 1.21 \ ATOM 340 CD1 TRP L 41 45.737 19.789 76.909 1.00 1.21 \ ATOM 341 CD2 TRP L 41 44.930 20.686 78.800 1.00 1.21 \ ATOM 342 NE1 TRP L 41 46.352 21.002 77.091 1.00 1.21 \ ATOM 343 CE2 TRP L 41 45.881 21.572 78.246 1.00 1.21 \ ATOM 344 CE3 TRP L 41 44.291 21.034 79.999 1.00 1.21 \ ATOM 345 CZ2 TRP L 41 46.205 22.775 78.845 1.00 1.21 \ ATOM 346 CZ3 TRP L 41 44.621 22.230 80.588 1.00 1.21 \ ATOM 347 CH2 TRP L 41 45.569 23.089 80.014 1.00 1.21 \ ATOM 348 N ILE L 42 42.104 17.957 75.518 1.00 -1.34 \ ATOM 349 CA ILE L 42 41.962 18.048 74.075 1.00 -1.34 \ ATOM 350 C ILE L 42 40.913 19.107 73.692 1.00 -1.34 \ ATOM 351 O ILE L 42 41.169 19.995 72.876 1.00 -1.34 \ ATOM 352 CB ILE L 42 41.782 16.607 73.447 1.00 -1.34 \ ATOM 353 CG1 ILE L 42 42.797 16.403 72.305 1.00 -1.34 \ ATOM 354 CG2 ILE L 42 40.336 16.326 73.047 1.00 -1.34 \ ATOM 355 CD1 ILE L 42 42.990 14.940 71.863 1.00 -1.34 \ ATOM 356 N SER L 43 39.782 19.089 74.376 1.00 -1.06 \ ATOM 357 CA SER L 43 38.762 20.075 74.095 1.00 -1.06 \ ATOM 358 C SER L 43 38.947 21.323 74.951 1.00 -1.06 \ ATOM 359 O SER L 43 38.662 22.450 74.501 1.00 -1.06 \ ATOM 360 CB SER L 43 37.360 19.511 74.320 1.00 -1.06 \ ATOM 361 OG SER L 43 36.943 18.727 73.219 1.00 -1.06 \ ATOM 362 N TYR L 44 39.458 21.141 76.166 1.00 1.21 \ ATOM 363 CA TYR L 44 39.648 22.246 77.109 1.00 1.21 \ ATOM 364 C TYR L 44 40.590 23.344 76.599 1.00 1.21 \ ATOM 365 O TYR L 44 40.287 24.519 76.705 1.00 1.21 \ ATOM 366 CB TYR L 44 40.125 21.704 78.483 1.00 1.21 \ ATOM 367 CG TYR L 44 40.248 22.764 79.574 1.00 1.21 \ ATOM 368 CD1 TYR L 44 39.116 23.394 80.096 1.00 1.21 \ ATOM 369 CD2 TYR L 44 41.485 23.179 80.051 1.00 1.21 \ ATOM 370 CE1 TYR L 44 39.220 24.398 81.045 1.00 1.21 \ ATOM 371 CE2 TYR L 44 41.588 24.179 80.997 1.00 1.21 \ ATOM 372 CZ TYR L 44 40.454 24.784 81.490 1.00 1.21 \ ATOM 373 OH TYR L 44 40.555 25.772 82.440 1.00 1.21 \ """, "e2firL3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2firL3_csv", state=0, origin=1) cmd.zoom("e2firL3_csv", animate=-1)