cmd.read_pdbstr("""\ ATOM 1 N GLY R 9 -46.955 -59.536 72.736 1.00 -1.00 \ ATOM 2 CA GLY R 9 -46.308 -59.807 71.414 1.00 -1.00 \ ATOM 3 C GLY R 9 -46.783 -61.099 70.775 1.00 -1.00 \ ATOM 4 O GLY R 9 -47.977 -61.402 70.795 1.00 -1.00 \ ATOM 5 N THR R 10 -45.849 -61.858 70.203 1.00 -1.00 \ ATOM 6 CA THR R 10 -46.173 -63.131 69.560 1.00 -1.00 \ ATOM 7 C THR R 10 -45.067 -64.184 69.724 1.00 -1.00 \ ATOM 8 O THR R 10 -43.913 -63.857 70.035 1.00 -1.00 \ ATOM 9 CB THR R 10 -46.454 -62.946 68.031 1.00 -1.00 \ ATOM 10 OG1 THR R 10 -45.666 -61.862 67.521 1.00 -1.00 \ ATOM 11 CG2 THR R 10 -47.933 -62.682 67.773 1.00 -1.00 \ ATOM 12 N ARG R 11 -45.445 -65.451 69.534 1.00 0.82 \ ATOM 13 CA ARG R 11 -44.512 -66.582 69.602 1.00 0.82 \ ATOM 14 C ARG R 11 -44.203 -66.937 68.141 1.00 0.82 \ ATOM 15 O ARG R 11 -43.492 -67.907 67.854 1.00 0.82 \ ATOM 16 CB ARG R 11 -45.141 -67.794 70.324 1.00 0.82 \ ATOM 17 CG ARG R 11 -45.827 -68.844 69.427 1.00 0.82 \ ATOM 18 CD ARG R 11 -47.112 -68.335 68.778 1.00 0.82 \ ATOM 19 NE ARG R 11 -48.101 -67.912 69.765 1.00 0.82 \ ATOM 20 CZ ARG R 11 -49.346 -67.550 69.470 1.00 0.82 \ ATOM 21 NH1 ARG R 11 -49.763 -67.560 68.212 1.00 0.82 \ ATOM 22 NH2 ARG R 11 -50.174 -67.177 70.439 1.00 0.82 \ ATOM 23 N ARG R 12 -44.773 -66.129 67.237 1.00 0.82 \ ATOM 24 CA ARG R 12 -44.607 -66.242 65.784 1.00 0.82 \ ATOM 25 C ARG R 12 -43.341 -65.465 65.424 1.00 0.82 \ ATOM 26 O ARG R 12 -42.642 -65.799 64.465 1.00 0.82 \ ATOM 27 CB ARG R 12 -45.823 -65.630 65.065 1.00 0.82 \ ATOM 28 CG ARG R 12 -45.770 -65.601 63.526 1.00 0.82 \ ATOM 29 CD ARG R 12 -45.761 -66.996 62.884 1.00 0.82 \ ATOM 30 NE ARG R 12 -46.146 -68.054 63.815 1.00 0.82 \ ATOM 31 CZ ARG R 12 -47.366 -68.212 64.321 1.00 0.82 \ ATOM 32 NH1 ARG R 12 -48.345 -67.383 63.982 1.00 0.82 \ ATOM 33 NH2 ARG R 12 -47.597 -69.187 65.191 1.00 0.82 \ ATOM 34 N ASP R 13 -43.053 -64.426 66.207 1.00 0.82 \ ATOM 35 CA ASP R 13 -41.858 -63.619 65.996 1.00 0.82 \ ATOM 36 C ASP R 13 -40.654 -64.432 66.484 1.00 0.82 \ ATOM 37 O ASP R 13 -39.522 -64.205 66.050 1.00 0.82 \ ATOM 38 CB ASP R 13 -41.956 -62.297 66.764 1.00 0.82 \ ATOM 39 CG ASP R 13 -40.830 -61.348 66.418 1.00 0.82 \ ATOM 40 OD1 ASP R 13 -40.655 -61.058 65.215 1.00 0.82 \ ATOM 41 OD2 ASP R 13 -40.122 -60.897 67.344 1.00 0.82 \ ATOM 42 N PHE R 14 -40.919 -65.378 67.389 1.00 0.82 \ ATOM 43 CA PHE R 14 -39.896 -66.274 67.931 1.00 0.82 \ ATOM 44 C PHE R 14 -39.522 -67.310 66.856 1.00 0.82 \ ATOM 45 O PHE R 14 -38.343 -67.536 66.576 1.00 0.82 \ ATOM 46 CB PHE R 14 -40.425 -66.989 69.190 1.00 0.82 \ ATOM 47 CG PHE R 14 -39.733 -68.295 69.479 1.00 0.82 \ ATOM 48 CD1 PHE R 14 -38.436 -68.320 69.968 1.00 0.82 \ ATOM 49 CD2 PHE R 14 -40.359 -69.506 69.190 1.00 0.82 \ ATOM 50 CE1 PHE R 14 -37.767 -69.537 70.160 1.00 0.82 \ ATOM 51 CE2 PHE R 14 -39.698 -70.728 69.378 1.00 0.82 \ ATOM 52 CZ PHE R 14 -38.402 -70.741 69.861 1.00 0.82 \ ATOM 53 N LEU R 15 -40.537 -67.931 66.256 1.00 -0.76 \ ATOM 54 CA LEU R 15 -40.348 -68.940 65.217 1.00 -0.76 \ ATOM 55 C LEU R 15 -39.543 -68.397 64.053 1.00 -0.76 \ ATOM 56 O LEU R 15 -38.673 -69.080 63.535 1.00 -0.76 \ ATOM 57 CB LEU R 15 -41.699 -69.418 64.700 1.00 -0.76 \ ATOM 58 CG LEU R 15 -41.659 -70.554 63.689 1.00 -0.76 \ ATOM 59 CD1 LEU R 15 -41.173 -71.810 64.365 1.00 -0.76 \ ATOM 60 CD2 LEU R 15 -43.043 -70.768 63.125 1.00 -0.76 \ ATOM 61 N TYR R 16 -39.847 -67.170 63.642 1.00 0.82 \ ATOM 62 CA TYR R 16 -39.145 -66.528 62.535 1.00 0.82 \ ATOM 63 C TYR R 16 -37.696 -66.214 62.888 1.00 0.82 \ ATOM 64 O TYR R 16 -36.966 -65.607 62.099 1.00 0.82 \ ATOM 65 CB TYR R 16 -39.855 -65.240 62.129 1.00 0.82 \ ATOM 66 CG TYR R 16 -41.135 -65.444 61.342 1.00 0.82 \ ATOM 67 CD1 TYR R 16 -41.998 -66.503 61.633 1.00 0.82 \ ATOM 68 CD2 TYR R 16 -41.529 -64.523 60.360 1.00 0.82 \ ATOM 69 CE1 TYR R 16 -43.222 -66.636 60.977 1.00 0.82 \ ATOM 70 CE2 TYR R 16 -42.754 -64.646 59.699 1.00 0.82 \ ATOM 71 CZ TYR R 16 -43.593 -65.703 60.018 1.00 0.82 \ ATOM 72 OH TYR R 16 -44.815 -65.811 59.409 1.00 0.82 \ ATOM 73 N TYR R 17 -37.289 -66.617 64.086 1.00 -0.77 \ ATOM 74 CA TYR R 17 -35.921 -66.408 64.555 1.00 -0.77 \ ATOM 75 C TYR R 17 -35.291 -67.765 64.782 1.00 -0.77 \ ATOM 76 O TYR R 17 -34.143 -67.998 64.410 1.00 -0.77 \ ATOM 77 CB TYR R 17 -35.911 -65.595 65.856 1.00 -0.77 \ ATOM 78 CG TYR R 17 -35.905 -64.101 65.626 1.00 -0.77 \ ATOM 79 CD1 TYR R 17 -36.526 -63.546 64.494 1.00 -0.77 \ ATOM 80 CD2 TYR R 17 -35.283 -63.236 66.531 1.00 -0.77 \ ATOM 81 CE1 TYR R 17 -36.523 -62.173 64.265 1.00 -0.77 \ ATOM 82 CE2 TYR R 17 -35.276 -61.856 66.315 1.00 -0.77 \ ATOM 83 CZ TYR R 17 -35.897 -61.333 65.178 1.00 -0.77 \ ATOM 84 OH TYR R 17 -35.885 -59.976 64.952 1.00 -0.77 \ ATOM 85 N ALA R 18 -36.061 -68.658 65.396 1.00 0.82 \ ATOM 86 CA ALA R 18 -35.597 -70.012 65.657 1.00 0.82 \ ATOM 87 C ALA R 18 -35.302 -70.637 64.293 1.00 0.82 \ ATOM 88 O ALA R 18 -34.481 -71.549 64.168 1.00 0.82 \ ATOM 89 CB ALA R 18 -36.681 -70.802 66.390 1.00 0.82 \ ATOM 90 N THR R 19 -35.982 -70.124 63.271 1.00 0.82 \ ATOM 91 CA THR R 19 -35.808 -70.591 61.907 1.00 0.82 \ ATOM 92 C THR R 19 -34.560 -69.956 61.303 1.00 0.82 \ ATOM 93 O THR R 19 -33.549 -70.633 61.103 1.00 0.82 \ ATOM 94 CB THR R 19 -37.058 -70.267 61.067 1.00 0.82 \ ATOM 95 OG1 THR R 19 -37.998 -71.337 61.224 1.00 0.82 \ ATOM 96 CG2 THR R 19 -36.714 -70.066 59.591 1.00 0.82 \ ATOM 97 N ALA R 20 -34.618 -68.656 61.029 1.00 -0.76 \ ATOM 98 CA ALA R 20 -33.470 -67.959 60.459 1.00 -0.76 \ ATOM 99 C ALA R 20 -32.210 -68.305 61.258 1.00 -0.76 \ ATOM 100 O ALA R 20 -31.092 -68.248 60.748 1.00 -0.76 \ ATOM 101 CB ALA R 20 -33.715 -66.460 60.475 1.00 -0.76 \ ATOM 102 N GLY R 21 -32.409 -68.675 62.517 1.00 -0.77 \ ATOM 103 CA GLY R 21 -31.290 -69.035 63.368 1.00 -0.77 \ ATOM 104 C GLY R 21 -30.680 -70.362 62.968 1.00 -0.77 \ ATOM 105 O GLY R 21 -29.493 -70.441 62.665 1.00 -0.77 \ ATOM 106 N ALA R 22 -31.503 -71.407 62.969 1.00 -1.75 \ ATOM 107 CA ALA R 22 -31.058 -72.749 62.598 1.00 -1.75 \ ATOM 108 C ALA R 22 -30.505 -72.740 61.168 1.00 -1.75 \ ATOM 109 O ALA R 22 -29.674 -73.583 60.799 1.00 -1.75 \ ATOM 110 CB ALA R 22 -32.225 -73.745 62.718 1.00 -1.75 \ ATOM 111 N GLY R 23 -30.974 -71.780 60.371 1.00 0.82 \ ATOM 112 CA GLY R 23 -30.512 -71.663 59.004 1.00 0.82 \ ATOM 113 C GLY R 23 -29.062 -71.246 59.026 1.00 0.82 \ ATOM 114 O GLY R 23 -28.179 -71.961 58.553 1.00 0.82 \ ATOM 115 N ALA R 24 -28.814 -70.081 59.602 1.00 -0.81 \ ATOM 116 CA ALA R 24 -27.458 -69.563 59.686 1.00 -0.81 \ ATOM 117 C ALA R 24 -26.488 -70.588 60.295 1.00 -0.81 \ ATOM 118 O ALA R 24 -25.300 -70.591 59.963 1.00 -0.81 \ ATOM 119 CB ALA R 24 -27.454 -68.262 60.497 1.00 -0.81 \ ATOM 120 N VAL R 25 -26.984 -71.461 61.170 1.00 0.82 \ ATOM 121 CA VAL R 25 -26.113 -72.451 61.794 1.00 0.82 \ ATOM 122 C VAL R 25 -25.628 -73.433 60.752 1.00 0.82 \ ATOM 123 O VAL R 25 -24.444 -73.789 60.715 1.00 0.82 \ ATOM 124 CB VAL R 25 -26.823 -73.242 62.908 1.00 0.82 \ ATOM 125 CG1 VAL R 25 -25.831 -74.172 63.595 1.00 0.82 \ ATOM 126 CG2 VAL R 25 -27.434 -72.285 63.912 1.00 0.82 \ ATOM 127 N ALA R 26 -26.553 -73.874 59.905 1.00 -0.81 \ ATOM 128 CA ALA R 26 -26.223 -74.813 58.840 1.00 -0.81 \ ATOM 129 C ALA R 26 -25.238 -74.134 57.876 1.00 -0.81 \ ATOM 130 O ALA R 26 -24.155 -74.672 57.631 1.00 -0.81 \ ATOM 131 CB ALA R 26 -27.495 -75.244 58.117 1.00 -0.81 \ ATOM 132 N THR R 27 -25.605 -72.955 57.358 1.00 -0.80 \ ATOM 133 CA THR R 27 -24.736 -72.200 56.446 1.00 -0.80 \ ATOM 134 C THR R 27 -23.286 -72.175 56.961 1.00 -0.80 \ ATOM 135 O THR R 27 -22.321 -72.293 56.180 1.00 -0.80 \ ATOM 136 CB THR R 27 -25.196 -70.729 56.288 1.00 -0.80 \ ATOM 137 OG1 THR R 27 -26.558 -70.691 55.874 1.00 -0.80 \ ATOM 138 CG2 THR R 27 -24.362 -70.018 55.230 1.00 -0.80 \ ATOM 139 N GLY R 28 -23.140 -72.015 58.276 1.00 0.82 \ ATOM 140 CA GLY R 28 -21.815 -71.983 58.858 1.00 0.82 \ ATOM 141 C GLY R 28 -21.117 -73.324 58.747 1.00 0.82 \ ATOM 142 O GLY R 28 -19.964 -73.407 58.282 1.00 0.82 \ ATOM 143 N ALA R 29 -21.824 -74.369 59.185 1.00 -1.72 \ ATOM 144 CA ALA R 29 -21.320 -75.750 59.157 1.00 -1.72 \ ATOM 145 C ALA R 29 -20.856 -76.088 57.753 1.00 -1.72 \ ATOM 146 O ALA R 29 -19.975 -76.925 57.555 1.00 -1.72 \ ATOM 147 CB ALA R 29 -22.419 -76.727 59.595 1.00 -1.72 \ ATOM 148 N ALA R 30 -21.468 -75.407 56.790 1.00 0.82 \ ATOM 149 CA ALA R 30 -21.170 -75.557 55.380 1.00 0.82 \ ATOM 150 C ALA R 30 -19.898 -74.803 55.049 1.00 0.82 \ ATOM 151 O ALA R 30 -18.925 -75.366 54.560 1.00 0.82 \ ATOM 152 CB ALA R 30 -22.301 -74.996 54.580 1.00 0.82 \ ATOM 153 N VAL R 31 -19.917 -73.507 55.311 1.00 -1.72 \ ATOM 154 CA VAL R 31 -18.751 -72.682 55.050 1.00 -1.72 \ ATOM 155 C VAL R 31 -17.442 -73.160 55.746 1.00 -1.72 \ ATOM 156 O VAL R 31 -16.383 -73.256 55.105 1.00 -1.72 \ ATOM 157 CB VAL R 31 -19.086 -71.231 55.421 1.00 -1.72 \ ATOM 158 CG1 VAL R 31 -17.824 -70.389 55.480 1.00 -1.72 \ ATOM 159 CG2 VAL R 31 -20.071 -70.677 54.389 1.00 -1.72 \ ATOM 160 N TRP R 32 -17.499 -73.484 57.035 1.00 0.82 \ ATOM 161 CA TRP R 32 -16.283 -73.928 57.698 1.00 0.82 \ ATOM 162 C TRP R 32 -15.382 -74.888 56.874 1.00 0.82 \ ATOM 163 O TRP R 32 -14.264 -74.522 56.489 1.00 0.82 \ ATOM 164 CB TRP R 32 -16.613 -74.563 59.053 1.00 0.82 \ ATOM 165 CG TRP R 32 -15.388 -75.155 59.733 1.00 0.82 \ ATOM 166 CD1 TRP R 32 -15.289 -76.390 60.344 1.00 0.82 \ ATOM 167 CD2 TRP R 32 -14.083 -74.573 59.825 1.00 0.82 \ ATOM 168 NE1 TRP R 32 -14.002 -76.610 60.800 1.00 0.82 \ ATOM 169 CE2 TRP R 32 -13.243 -75.512 60.495 1.00 0.82 \ ATOM 170 CE3 TRP R 32 -13.536 -73.358 59.406 1.00 0.82 \ ATOM 171 CZ2 TRP R 32 -11.896 -75.266 60.747 1.00 0.82 \ ATOM 172 CZ3 TRP R 32 -12.194 -73.119 59.656 1.00 0.82 \ ATOM 173 CH2 TRP R 32 -11.388 -74.073 60.323 1.00 0.82 \ ATOM 174 N PRO R 33 -15.866 -76.115 56.577 1.00 0.82 \ ATOM 175 CA PRO R 33 -15.095 -77.123 55.814 1.00 0.82 \ ATOM 176 C PRO R 33 -14.581 -76.713 54.455 1.00 0.82 \ ATOM 177 O PRO R 33 -13.619 -77.320 53.940 1.00 0.82 \ ATOM 178 CB PRO R 33 -16.041 -78.314 55.736 1.00 0.82 \ ATOM 179 CG PRO R 33 -17.396 -77.661 55.793 1.00 0.82 \ ATOM 180 CD PRO R 33 -17.234 -76.601 56.841 1.00 0.82 \ ATOM 181 N LEU R 34 -15.241 -75.699 53.884 1.00 -1.00 \ ATOM 182 CA LEU R 34 -14.861 -75.139 52.586 1.00 -1.00 \ ATOM 183 C LEU R 34 -13.610 -74.308 52.789 1.00 -1.00 \ ATOM 184 O LEU R 34 -12.869 -74.032 51.831 1.00 -1.00 \ ATOM 185 CB LEU R 34 -15.942 -74.217 52.034 1.00 -1.00 \ ATOM 186 CG LEU R 34 -17.136 -74.828 51.320 1.00 -1.00 \ ATOM 187 CD1 LEU R 34 -18.029 -73.683 50.882 1.00 -1.00 \ ATOM 188 CD2 LEU R 34 -16.691 -75.689 50.116 1.00 -1.00 \ ATOM 189 N ILE R 35 -13.399 -73.890 54.042 1.00 -1.00 \ ATOM 190 CA ILE R 35 -12.231 -73.095 54.415 1.00 -1.00 \ ATOM 191 C ILE R 35 -11.157 -74.036 54.952 1.00 -1.00 \ ATOM 192 O ILE R 35 -9.992 -74.012 54.540 1.00 -1.00 \ ATOM 193 CB ILE R 35 -12.563 -72.081 55.540 1.00 -1.00 \ ATOM 194 CG1 ILE R 35 -13.729 -71.196 55.135 1.00 -1.00 \ ATOM 195 CG2 ILE R 35 -11.341 -71.205 55.830 1.00 -1.00 \ ATOM 196 CD1 ILE R 35 -14.128 -70.235 56.224 1.00 -1.00 \ ATOM 197 N ASN R 36 -11.583 -74.883 55.871 1.00 -1.00 \ ATOM 198 CA ASN R 36 -10.666 -75.792 56.501 1.00 -1.00 \ ATOM 199 C ASN R 36 -9.912 -76.723 55.549 1.00 -1.00 \ ATOM 200 O ASN R 36 -8.789 -77.157 55.847 1.00 -1.00 \ ATOM 201 CB ASN R 36 -11.417 -76.594 57.563 1.00 -1.00 \ ATOM 202 CG ASN R 36 -10.501 -77.464 58.386 1.00 -1.00 \ ATOM 203 OD1 ASN R 36 -9.479 -77.007 58.911 1.00 -1.00 \ ATOM 204 ND2 ASN R 36 -10.864 -78.726 58.513 1.00 -1.00 \ ATOM 205 N GLN R 37 -10.516 -77.028 54.405 1.00 -1.00 \ ATOM 206 CA GLN R 37 -9.881 -77.943 53.456 1.00 -1.00 \ ATOM 207 C GLN R 37 -8.560 -77.392 52.950 1.00 -1.00 \ ATOM 208 O GLN R 37 -7.734 -78.138 52.412 1.00 -1.00 \ ATOM 209 CB GLN R 37 -10.816 -78.236 52.268 1.00 -1.00 \ ATOM 210 CG GLN R 37 -10.211 -77.898 50.903 1.00 -1.00 \ ATOM 211 CD GLN R 37 -10.499 -76.480 50.491 1.00 -1.00 \ ATOM 212 OE1 GLN R 37 -9.823 -75.928 49.620 1.00 -1.00 \ ATOM 213 NE2 GLN R 37 -11.517 -75.882 51.101 1.00 -1.00 \ ATOM 214 N MET R 38 -8.358 -76.088 53.134 1.00 -1.00 \ ATOM 215 CA MET R 38 -7.132 -75.468 52.663 1.00 -1.00 \ ATOM 216 C MET R 38 -6.001 -75.621 53.631 1.00 -1.00 \ ATOM 217 O MET R 38 -4.833 -75.462 53.253 1.00 -1.00 \ ATOM 218 CB MET R 38 -7.344 -73.999 52.333 1.00 -1.00 \ ATOM 219 CG MET R 38 -7.883 -73.799 50.923 1.00 -1.00 \ ATOM 220 SD MET R 38 -8.230 -72.116 50.492 1.00 -1.00 \ ATOM 221 CE MET R 38 -6.575 -71.578 49.960 1.00 -1.00 \ ATOM 222 N ASN R 39 -6.341 -75.953 54.878 1.00 -1.00 \ ATOM 223 CA ASN R 39 -5.320 -76.165 55.891 1.00 -1.00 \ ATOM 224 C ASN R 39 -4.466 -77.379 55.570 1.00 -1.00 \ ATOM 225 O ASN R 39 -4.817 -78.201 54.707 1.00 -1.00 \ ATOM 226 CB ASN R 39 -5.946 -76.256 57.270 1.00 -1.00 \ ATOM 227 CG ASN R 39 -6.403 -74.909 57.736 1.00 -1.00 \ ATOM 228 OD1 ASN R 39 -5.656 -73.924 57.613 1.00 -1.00 \ ATOM 229 ND2 ASN R 39 -7.631 -74.828 58.250 1.00 -1.00 \ ATOM 230 N PRO R 40 -3.308 -77.495 56.233 1.00 -1.00 \ ATOM 231 CA PRO R 40 -2.416 -78.620 55.978 1.00 -1.00 \ ATOM 232 C PRO R 40 -3.109 -79.956 55.983 1.00 -1.00 \ ATOM 233 O PRO R 40 -3.818 -80.326 56.943 1.00 -1.00 \ ATOM 234 CB PRO R 40 -1.370 -78.476 57.064 1.00 -1.00 \ ATOM 235 CG PRO R 40 -1.263 -77.000 57.194 1.00 -1.00 \ ATOM 236 CD PRO R 40 -2.720 -76.586 57.229 1.00 -1.00 \ ATOM 237 N SER R 41 -2.899 -80.651 54.865 1.00 -1.00 \ ATOM 238 CA SER R 41 -3.443 -81.980 54.608 1.00 -1.00 \ ATOM 239 C SER R 41 -2.727 -82.939 55.557 1.00 -1.00 \ ATOM 240 O SER R 41 -1.538 -82.789 55.796 1.00 -1.00 \ ATOM 241 CB SER R 41 -3.181 -82.369 53.134 1.00 -1.00 \ ATOM 242 OG SER R 41 -2.514 -81.330 52.404 1.00 -1.00 \ """, "e2fynR2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2fynR2_csv", state=0, origin=1) cmd.zoom("e2fynR2_csv", animate=-1)