cmd.read_pdbstr("""\ ATOM 9 N VAL B 35 -1.659 -18.438 30.202 1.00 0.44 \ ATOM 10 CA VAL B 35 -0.738 -17.381 29.886 1.00 0.44 \ ATOM 11 C VAL B 35 0.207 -17.142 31.027 1.00 0.44 \ ATOM 12 O VAL B 35 -0.146 -17.318 32.196 1.00 0.44 \ ATOM 13 CB VAL B 35 -1.434 -16.072 29.489 1.00 0.44 \ ATOM 14 CG1 VAL B 35 -0.437 -15.123 28.831 1.00 0.44 \ ATOM 15 CG2 VAL B 35 -2.564 -16.372 28.523 1.00 0.44 \ ATOM 16 N SER B 36 1.415 -16.696 30.686 1.00 0.44 \ ATOM 17 CA SER B 36 2.406 -16.338 31.679 1.00 0.44 \ ATOM 18 C SER B 36 1.978 -15.057 32.404 1.00 0.44 \ ATOM 19 O SER B 36 1.136 -14.281 31.950 1.00 0.44 \ ATOM 20 CB SER B 36 3.734 -16.008 31.042 1.00 0.44 \ ATOM 21 OG SER B 36 3.596 -14.775 30.361 1.00 0.44 \ ATOM 22 N LYS B 37 2.605 -14.823 33.550 1.00 -2.20 \ ATOM 23 CA LYS B 37 2.309 -13.683 34.350 1.00 -2.20 \ ATOM 24 C LYS B 37 2.647 -12.393 33.659 1.00 -2.20 \ ATOM 25 O LYS B 37 1.874 -11.438 33.690 1.00 -2.20 \ ATOM 26 CB LYS B 37 2.653 -13.849 35.810 1.00 -2.20 \ ATOM 27 CG LYS B 37 4.012 -13.432 36.290 1.00 -2.20 \ ATOM 28 CD LYS B 37 3.941 -13.409 37.812 1.00 -2.20 \ ATOM 29 CE LYS B 37 5.113 -14.014 38.564 1.00 -2.20 \ ATOM 30 NZ LYS B 37 5.382 -13.241 39.794 1.00 -2.20 \ ATOM 31 N LEU B 38 3.786 -12.421 32.988 1.00 0.44 \ ATOM 32 CA LEU B 38 4.235 -11.273 32.245 1.00 0.44 \ ATOM 33 C LEU B 38 3.273 -10.968 31.104 1.00 0.44 \ ATOM 34 O LEU B 38 2.854 -9.841 30.848 1.00 0.44 \ ATOM 35 CB LEU B 38 5.692 -11.481 31.751 1.00 0.44 \ ATOM 36 CG LEU B 38 6.265 -10.344 30.897 1.00 0.44 \ ATOM 37 CD1 LEU B 38 6.172 -9.008 31.629 1.00 0.44 \ ATOM 38 CD2 LEU B 38 7.718 -10.627 30.529 1.00 0.44 \ ATOM 39 N SER B 39 2.884 -11.997 30.404 1.00 0.44 \ ATOM 40 CA SER B 39 2.022 -11.752 29.282 1.00 0.44 \ ATOM 41 C SER B 39 0.633 -11.255 29.646 1.00 0.44 \ ATOM 42 O SER B 39 0.069 -10.444 28.933 1.00 0.44 \ ATOM 43 CB SER B 39 1.954 -13.018 28.459 1.00 0.44 \ ATOM 44 OG SER B 39 2.715 -12.821 27.289 1.00 0.44 \ ATOM 45 N GLN B 40 0.089 -11.793 30.733 1.00 0.44 \ ATOM 46 CA GLN B 40 -1.239 -11.442 31.191 1.00 0.44 \ ATOM 47 C GLN B 40 -1.192 -9.986 31.611 1.00 0.44 \ ATOM 48 O GLN B 40 -2.076 -9.226 31.291 1.00 0.44 \ ATOM 49 CB GLN B 40 -1.703 -12.397 32.331 1.00 0.44 \ ATOM 50 CG GLN B 40 -3.205 -12.401 32.705 1.00 0.44 \ ATOM 51 CD GLN B 40 -4.140 -12.526 31.507 1.00 0.44 \ ATOM 52 OE1 GLN B 40 -5.327 -12.125 31.550 1.00 0.44 \ ATOM 53 NE2 GLN B 40 -3.575 -13.059 30.418 1.00 0.44 \ ATOM 54 N LEU B 41 -0.126 -9.598 32.293 1.00 0.44 \ ATOM 55 CA LEU B 41 0.038 -8.222 32.726 1.00 0.44 \ ATOM 56 C LEU B 41 0.146 -7.252 31.557 1.00 0.44 \ ATOM 57 O LEU B 41 -0.446 -6.163 31.579 1.00 0.44 \ ATOM 58 CB LEU B 41 1.183 -8.101 33.734 1.00 0.44 \ ATOM 59 CG LEU B 41 1.491 -6.673 34.187 1.00 0.44 \ ATOM 60 CD1 LEU B 41 0.268 -5.917 34.728 1.00 0.44 \ ATOM 61 CD2 LEU B 41 2.539 -6.716 35.276 1.00 0.44 \ ATOM 62 N GLN B 42 0.855 -7.633 30.508 1.00 0.44 \ ATOM 63 CA GLN B 42 0.960 -6.768 29.336 1.00 0.44 \ ATOM 64 C GLN B 42 -0.388 -6.615 28.639 1.00 0.44 \ ATOM 65 O GLN B 42 -0.790 -5.528 28.163 1.00 0.44 \ ATOM 66 CB GLN B 42 1.903 -7.347 28.286 1.00 0.44 \ ATOM 67 CG GLN B 42 3.364 -7.219 28.705 1.00 0.44 \ ATOM 68 CD GLN B 42 4.255 -8.065 27.814 1.00 0.44 \ ATOM 69 OE1 GLN B 42 5.434 -7.751 27.587 1.00 0.44 \ ATOM 70 NE2 GLN B 42 3.695 -9.175 27.336 1.00 0.44 \ ATOM 71 N THR B 43 -1.087 -7.746 28.573 1.00 0.44 \ ATOM 72 CA THR B 43 -2.386 -7.785 27.950 1.00 0.44 \ ATOM 73 C THR B 43 -3.412 -6.935 28.704 1.00 0.44 \ ATOM 74 O THR B 43 -4.159 -6.214 28.059 1.00 0.44 \ ATOM 75 CB THR B 43 -2.913 -9.212 27.752 1.00 0.44 \ ATOM 76 OG1 THR B 43 -1.856 -10.110 27.525 1.00 0.44 \ ATOM 77 CG2 THR B 43 -3.864 -9.218 26.573 1.00 0.44 \ ATOM 78 N GLU B 44 -3.440 -7.047 30.049 1.00 0.44 \ ATOM 79 CA GLU B 44 -4.365 -6.289 30.925 1.00 0.44 \ ATOM 80 C GLU B 44 -4.098 -4.798 30.817 1.00 0.44 \ ATOM 81 O GLU B 44 -5.019 -3.987 30.868 1.00 0.44 \ ATOM 82 CB GLU B 44 -4.240 -6.631 32.429 1.00 0.44 \ ATOM 83 CG GLU B 44 -4.685 -8.054 32.801 1.00 0.44 \ ATOM 84 CD GLU B 44 -6.178 -8.154 32.851 1.00 0.44 \ ATOM 85 OE1 GLU B 44 -6.890 -7.170 32.931 1.00 0.44 \ ATOM 86 OE2 GLU B 44 -6.604 -9.397 32.775 1.00 0.44 \ ATOM 87 N LEU B 45 -2.815 -4.473 30.725 1.00 0.44 \ ATOM 88 CA LEU B 45 -2.308 -3.103 30.622 1.00 0.44 \ ATOM 89 C LEU B 45 -2.743 -2.458 29.316 1.00 0.44 \ ATOM 90 O LEU B 45 -3.248 -1.334 29.248 1.00 0.44 \ ATOM 91 CB LEU B 45 -0.747 -3.088 30.701 1.00 0.44 \ ATOM 92 CG LEU B 45 -0.165 -2.695 32.062 1.00 0.44 \ ATOM 93 CD1 LEU B 45 -1.119 -3.060 33.198 1.00 0.44 \ ATOM 94 CD2 LEU B 45 1.174 -3.391 32.280 1.00 0.44 \ ATOM 95 N LEU B 46 -2.567 -3.212 28.253 1.00 0.44 \ ATOM 96 CA LEU B 46 -2.932 -2.710 26.966 1.00 0.44 \ ATOM 97 C LEU B 46 -4.422 -2.484 26.860 1.00 0.44 \ ATOM 98 O LEU B 46 -4.855 -1.451 26.366 1.00 0.44 \ ATOM 99 CB LEU B 46 -2.499 -3.686 25.878 1.00 0.44 \ ATOM 100 CG LEU B 46 -2.815 -3.095 24.534 1.00 0.44 \ ATOM 101 CD1 LEU B 46 -1.876 -1.915 24.294 1.00 0.44 \ ATOM 102 CD2 LEU B 46 -2.565 -4.177 23.515 1.00 0.44 \ ATOM 103 N ALA B 47 -5.225 -3.452 27.330 1.00 -2.19 \ ATOM 104 CA ALA B 47 -6.682 -3.332 27.287 1.00 -2.19 \ ATOM 105 C ALA B 47 -7.143 -2.129 28.085 1.00 -2.19 \ ATOM 106 O ALA B 47 -7.972 -1.348 27.624 1.00 -2.19 \ ATOM 107 CB ALA B 47 -7.358 -4.567 27.846 1.00 -2.19 \ ATOM 108 N ALA B 48 -6.596 -1.986 29.296 1.00 0.44 \ ATOM 109 CA ALA B 48 -6.948 -0.849 30.128 1.00 0.44 \ ATOM 110 C ALA B 48 -6.540 0.447 29.477 1.00 0.44 \ ATOM 111 O ALA B 48 -7.227 1.449 29.635 1.00 0.44 \ ATOM 112 CB ALA B 48 -6.361 -0.911 31.516 1.00 0.44 \ ATOM 113 N LEU B 49 -5.426 0.431 28.744 1.00 0.44 \ ATOM 114 CA LEU B 49 -4.959 1.647 28.082 1.00 0.44 \ ATOM 115 C LEU B 49 -5.946 2.095 27.044 1.00 0.44 \ ATOM 116 O LEU B 49 -6.238 3.288 26.959 1.00 0.44 \ ATOM 117 CB LEU B 49 -3.596 1.537 27.396 1.00 0.44 \ ATOM 118 CG LEU B 49 -2.435 1.739 28.356 1.00 0.44 \ ATOM 119 CD1 LEU B 49 -1.140 1.300 27.679 1.00 0.44 \ ATOM 120 CD2 LEU B 49 -2.351 3.225 28.698 1.00 0.44 \ ATOM 121 N LEU B 50 -6.425 1.121 26.271 1.00 0.44 \ ATOM 122 CA LEU B 50 -7.373 1.347 25.198 1.00 0.44 \ ATOM 123 C LEU B 50 -8.672 1.887 25.735 1.00 0.44 \ ATOM 124 O LEU B 50 -9.251 2.846 25.238 1.00 0.44 \ ATOM 125 CB LEU B 50 -7.610 0.074 24.387 1.00 0.44 \ ATOM 126 CG LEU B 50 -6.475 -0.149 23.410 1.00 0.44 \ ATOM 127 CD1 LEU B 50 -6.777 -1.338 22.499 1.00 0.44 \ ATOM 128 CD2 LEU B 50 -6.294 1.128 22.594 1.00 0.44 \ ATOM 129 N GLU B 51 -9.100 1.274 26.784 1.00 0.44 \ ATOM 130 CA GLU B 51 -10.309 1.661 27.432 1.00 0.44 \ ATOM 131 C GLU B 51 -10.209 3.098 27.869 1.00 0.44 \ ATOM 132 O GLU B 51 -11.159 3.850 27.730 1.00 0.44 \ ATOM 133 CB GLU B 51 -10.458 0.724 28.625 1.00 0.44 \ ATOM 134 CG GLU B 51 -11.535 1.104 29.645 1.00 0.44 \ ATOM 135 CD GLU B 51 -11.681 -0.011 30.639 1.00 0.44 \ ATOM 136 OE1 GLU B 51 -11.196 -1.115 30.449 1.00 0.44 \ ATOM 137 OE2 GLU B 51 -12.351 0.313 31.716 1.00 0.44 \ ATOM 138 N SER B 52 -9.044 3.499 28.357 1.00 0.44 \ ATOM 139 CA SER B 52 -8.845 4.863 28.827 1.00 0.44 \ ATOM 140 C SER B 52 -8.921 5.935 27.760 1.00 0.44 \ ATOM 141 O SER B 52 -8.991 7.106 28.093 1.00 0.44 \ ATOM 142 CB SER B 52 -7.521 5.030 29.562 1.00 0.44 \ ATOM 143 OG SER B 52 -6.427 4.946 28.650 1.00 0.44 \ ATOM 149 N LEU B 54 -6.614 5.748 24.888 1.00 0.44 \ ATOM 150 CA LEU B 54 -5.337 5.781 24.182 1.00 0.44 \ ATOM 151 C LEU B 54 -5.469 6.037 22.661 1.00 0.44 \ ATOM 152 O LEU B 54 -6.193 5.372 21.925 1.00 0.44 \ ATOM 153 CB LEU B 54 -4.566 4.483 24.413 1.00 0.44 \ ATOM 154 CG LEU B 54 -3.193 4.529 23.774 1.00 0.44 \ ATOM 155 CD1 LEU B 54 -2.291 5.463 24.572 1.00 0.44 \ ATOM 156 CD2 LEU B 54 -2.602 3.131 23.756 1.00 0.44 \ ATOM 157 N SER B 55 -4.726 7.040 22.207 1.00 -2.20 \ ATOM 158 CA SER B 55 -4.673 7.551 20.847 1.00 -2.20 \ ATOM 159 C SER B 55 -4.203 6.592 19.778 1.00 -2.20 \ ATOM 160 O SER B 55 -3.311 5.767 19.982 1.00 -2.20 \ ATOM 161 CB SER B 55 -3.830 8.833 20.791 1.00 -2.20 \ ATOM 162 OG SER B 55 -2.458 8.579 20.464 1.00 -2.20 \ ATOM 163 N LYS B 56 -4.783 6.751 18.598 1.00 0.44 \ ATOM 164 CA LYS B 56 -4.359 5.935 17.497 1.00 0.44 \ ATOM 165 C LYS B 56 -2.947 6.374 17.144 1.00 0.44 \ ATOM 166 O LYS B 56 -2.124 5.586 16.694 1.00 0.44 \ ATOM 167 CB LYS B 56 -5.208 6.196 16.282 1.00 0.44 \ ATOM 168 CG LYS B 56 -6.200 5.107 15.974 1.00 0.44 \ ATOM 169 CD LYS B 56 -6.695 5.249 14.544 1.00 0.44 \ ATOM 170 CE LYS B 56 -7.902 6.164 14.388 1.00 0.44 \ ATOM 171 NZ LYS B 56 -7.944 6.851 13.082 1.00 0.44 \ ATOM 172 N GLU B 57 -2.691 7.666 17.335 1.00 0.44 \ ATOM 173 CA GLU B 57 -1.381 8.207 17.027 1.00 0.44 \ ATOM 174 C GLU B 57 -0.310 7.636 17.931 1.00 0.44 \ ATOM 175 O GLU B 57 0.800 7.412 17.475 1.00 0.44 \ ATOM 176 CB GLU B 57 -1.323 9.745 17.007 1.00 0.44 \ ATOM 177 CG GLU B 57 -2.359 10.400 16.075 1.00 0.44 \ ATOM 178 CD GLU B 57 -3.802 10.001 16.300 1.00 0.44 \ ATOM 179 OE1 GLU B 57 -4.247 9.642 17.364 1.00 0.44 \ ATOM 180 OE2 GLU B 57 -4.546 10.101 15.228 1.00 0.44 \ ATOM 181 N ALA B 58 -0.651 7.416 19.204 1.00 -2.20 \ ATOM 182 CA ALA B 58 0.281 6.857 20.153 1.00 -2.20 \ ATOM 183 C ALA B 58 0.672 5.424 19.740 1.00 -2.20 \ ATOM 184 O ALA B 58 1.834 4.997 19.797 1.00 -2.20 \ ATOM 185 CB ALA B 58 -0.400 6.892 21.499 1.00 -2.20 \ ATOM 186 N LEU B 59 -0.298 4.662 19.260 1.00 0.44 \ ATOM 187 CA LEU B 59 0.007 3.305 18.823 1.00 0.44 \ ATOM 188 C LEU B 59 0.815 3.297 17.544 1.00 0.44 \ ATOM 189 O LEU B 59 1.636 2.391 17.339 1.00 0.44 \ ATOM 190 CB LEU B 59 -1.235 2.399 18.685 1.00 0.44 \ ATOM 191 CG LEU B 59 -1.925 2.152 20.011 1.00 0.44 \ ATOM 192 CD1 LEU B 59 -3.398 1.869 19.772 1.00 0.44 \ ATOM 193 CD2 LEU B 59 -1.238 0.977 20.678 1.00 0.44 \ ATOM 194 N ILE B 60 0.559 4.304 16.687 1.00 0.44 \ ATOM 195 CA ILE B 60 1.269 4.448 15.413 1.00 0.44 \ ATOM 196 C ILE B 60 2.747 4.695 15.638 1.00 0.44 \ ATOM 197 O ILE B 60 3.592 4.139 14.957 1.00 0.44 \ ATOM 198 CB ILE B 60 0.710 5.482 14.430 1.00 0.44 \ ATOM 199 CG1 ILE B 60 -0.520 4.907 13.722 1.00 0.44 \ ATOM 200 CG2 ILE B 60 1.795 5.839 13.408 1.00 0.44 \ ATOM 201 CD1 ILE B 60 -1.640 5.924 13.510 1.00 0.44 \ ATOM 202 N GLN B 61 3.040 5.526 16.628 1.00 -2.20 \ ATOM 203 CA GLN B 61 4.399 5.852 16.974 1.00 -2.20 \ ATOM 204 C GLN B 61 5.114 4.683 17.641 1.00 -2.20 \ ATOM 205 O GLN B 61 6.288 4.415 17.338 1.00 -2.20 \ ATOM 206 CB GLN B 61 4.457 7.137 17.828 1.00 -2.20 \ ATOM 207 CG GLN B 61 3.407 8.232 17.479 1.00 -2.20 \ ATOM 208 CD GLN B 61 3.250 8.598 16.001 1.00 -2.20 \ ATOM 209 OE1 GLN B 61 3.713 9.661 15.538 1.00 -2.20 \ ATOM 210 NE2 GLN B 61 2.486 7.778 15.286 1.00 -2.20 \ ATOM 211 N ALA B 62 4.426 3.981 18.548 1.00 0.44 \ ATOM 212 CA ALA B 62 5.039 2.826 19.206 1.00 0.44 \ ATOM 213 C ALA B 62 5.343 1.711 18.203 1.00 0.44 \ ATOM 214 O ALA B 62 6.404 1.074 18.267 1.00 0.44 \ ATOM 215 CB ALA B 62 4.251 2.321 20.402 1.00 0.44 \ ATOM 216 N LEU B 63 4.399 1.522 17.267 1.00 0.44 \ ATOM 217 CA LEU B 63 4.487 0.526 16.208 1.00 0.44 \ ATOM 218 C LEU B 63 5.724 0.836 15.331 1.00 0.44 \ ATOM 219 O LEU B 63 6.622 0.026 15.047 1.00 0.44 \ ATOM 220 CB LEU B 63 3.165 0.473 15.391 1.00 0.44 \ ATOM 221 CG LEU B 63 3.137 -0.672 14.375 1.00 0.44 \ ATOM 222 CD1 LEU B 63 3.744 -1.932 14.987 1.00 0.44 \ ATOM 223 CD2 LEU B 63 1.727 -0.932 13.836 1.00 0.44 \ ATOM 224 N GLY B 64 5.765 2.092 14.908 1.00 0.44 \ ATOM 225 CA GLY B 64 6.877 2.617 14.137 1.00 0.44 \ ATOM 226 C GLY B 64 7.789 3.245 15.170 1.00 0.44 \ ATOM 227 O GLY B 64 7.635 4.426 15.475 1.00 0.44 \ ATOM 228 N GLU B 65 8.652 2.388 15.756 1.00 -1.00 \ ATOM 229 CA GLU B 65 9.651 2.612 16.817 1.00 -1.00 \ ATOM 230 C GLU B 65 10.025 1.249 17.312 1.00 -1.00 \ ATOM 231 O GLU B 65 11.050 1.056 17.947 1.00 -1.00 \ ATOM 232 CB GLU B 65 9.116 3.295 18.078 1.00 -1.00 \ ATOM 233 CG GLU B 65 10.075 4.366 18.685 1.00 -1.00 \ ATOM 234 CD GLU B 65 9.859 4.516 20.154 1.00 -1.00 \ ATOM 235 OE1 GLU B 65 10.087 3.617 20.931 1.00 -1.00 \ ATOM 236 OE2 GLU B 65 9.296 5.656 20.473 1.00 -1.00 \ ATOM 237 N TRP B 66 9.122 0.306 17.089 1.00 -1.00 \ ATOM 238 CA TRP B 66 9.354 -1.032 17.524 1.00 -1.00 \ ATOM 239 C TRP B 66 10.654 -1.601 16.960 1.00 -1.00 \ ATOM 240 O TRP B 66 10.715 -1.813 15.721 1.00 -1.00 \ ATOM 241 CB TRP B 66 8.153 -1.925 17.207 1.00 -1.00 \ ATOM 242 CG TRP B 66 8.090 -3.102 18.116 1.00 -1.00 \ ATOM 243 CD1 TRP B 66 7.371 -3.166 19.260 1.00 -1.00 \ ATOM 244 CD2 TRP B 66 8.795 -4.342 18.002 1.00 -1.00 \ ATOM 245 NE1 TRP B 66 7.550 -4.376 19.868 1.00 -1.00 \ ATOM 246 CE2 TRP B 66 8.424 -5.125 19.123 1.00 -1.00 \ ATOM 247 CE3 TRP B 66 9.695 -4.876 17.077 1.00 -1.00 \ ATOM 248 CZ2 TRP B 66 8.927 -6.416 19.330 1.00 -1.00 \ ATOM 249 CZ3 TRP B 66 10.192 -6.145 17.288 1.00 -1.00 \ ATOM 250 CH2 TRP B 66 9.810 -6.909 18.395 1.00 -1.00 \ """, "e2gypB1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2gypB1_csv", state=0, origin=1) cmd.zoom("e2gypB1_csv", animate=-1)