cmd.read_pdbstr("""\ ATOM 1 N CYS H 388 31.996 31.123 4.320 1.00 -1.00 \ ATOM 2 CA CYS H 388 31.192 30.459 5.347 1.00 -1.00 \ ATOM 3 C CYS H 388 29.865 29.856 4.869 1.00 -1.00 \ ATOM 4 O CYS H 388 29.415 28.853 5.426 1.00 -1.00 \ ATOM 5 CB CYS H 388 30.965 31.404 6.529 1.00 -1.00 \ ATOM 6 SG CYS H 388 32.501 31.890 7.353 1.00 -1.00 \ ATOM 7 N PHE H 389 29.262 30.433 3.825 1.00 -1.00 \ ATOM 8 CA PHE H 389 27.934 30.004 3.367 1.00 -1.00 \ ATOM 9 C PHE H 389 27.773 29.992 1.827 1.00 -1.00 \ ATOM 10 O PHE H 389 27.580 31.055 1.251 1.00 -1.00 \ ATOM 11 CB PHE H 389 26.897 30.960 4.000 1.00 -1.00 \ ATOM 12 CG PHE H 389 25.450 30.577 3.768 1.00 -1.00 \ ATOM 13 CD1 PHE H 389 24.814 29.659 4.599 1.00 -1.00 \ ATOM 14 CD2 PHE H 389 24.714 31.163 2.743 1.00 -1.00 \ ATOM 15 CE1 PHE H 389 23.480 29.309 4.400 1.00 -1.00 \ ATOM 16 CE2 PHE H 389 23.373 30.819 2.532 1.00 -1.00 \ ATOM 17 CZ PHE H 389 22.756 29.884 3.364 1.00 -1.00 \ ATOM 18 N LEU H 390 27.880 28.873 1.097 1.00 -0.01 \ ATOM 19 CA LEU H 390 28.749 27.668 1.238 1.00 -0.01 \ ATOM 20 C LEU H 390 28.040 26.313 1.227 1.00 -0.01 \ ATOM 21 O LEU H 390 27.600 25.817 2.267 1.00 -0.01 \ ATOM 22 CB LEU H 390 29.845 27.744 2.308 1.00 -0.01 \ ATOM 23 CG LEU H 390 31.188 28.334 1.858 1.00 -0.01 \ ATOM 24 CD1 LEU H 390 32.336 27.629 2.548 1.00 -0.01 \ ATOM 25 CD2 LEU H 390 31.363 28.237 0.362 1.00 -0.01 \ ATOM 26 N CYS H 391 27.952 25.730 0.031 1.00 2.12 \ ATOM 27 CA CYS H 391 27.437 24.371 -0.162 1.00 2.12 \ ATOM 28 C CYS H 391 28.343 23.363 0.554 1.00 2.12 \ ATOM 29 O CYS H 391 29.552 23.319 0.310 1.00 2.12 \ ATOM 30 CB CYS H 391 27.333 24.041 -1.655 1.00 2.12 \ ATOM 31 SG CYS H 391 26.773 22.334 -2.038 1.00 2.12 \ ATOM 32 N SER H 392 27.753 22.577 1.451 1.00 -1.00 \ ATOM 33 CA SER H 392 28.492 21.609 2.261 1.00 -1.00 \ ATOM 34 C SER H 392 29.333 20.677 1.408 1.00 -1.00 \ ATOM 35 O SER H 392 30.420 20.258 1.810 1.00 -1.00 \ ATOM 36 CB SER H 392 27.531 20.799 3.119 1.00 -1.00 \ ATOM 37 OG SER H 392 26.948 21.630 4.095 1.00 -1.00 \ ATOM 38 N CYS H 393 28.825 20.381 0.218 1.00 -0.89 \ ATOM 39 CA CYS H 393 29.493 19.489 -0.696 1.00 -0.89 \ ATOM 40 C CYS H 393 30.533 20.188 -1.580 1.00 -0.89 \ ATOM 41 O CYS H 393 31.731 19.912 -1.466 1.00 -0.89 \ ATOM 42 CB CYS H 393 28.467 18.754 -1.547 1.00 -0.89 \ ATOM 43 SG CYS H 393 29.162 17.344 -2.370 1.00 -0.89 \ ATOM 44 N CYS H 394 30.078 21.092 -2.447 1.00 2.12 \ ATOM 45 CA CYS H 394 30.941 21.672 -3.480 1.00 2.12 \ ATOM 46 C CYS H 394 31.524 23.045 -3.134 1.00 2.12 \ ATOM 47 O CYS H 394 32.295 23.601 -3.919 1.00 2.12 \ ATOM 48 CB CYS H 394 30.195 21.741 -4.814 1.00 2.12 \ ATOM 49 SG CYS H 394 28.845 22.941 -4.853 1.00 2.12 \ ATOM 50 N SER H 395 31.151 23.580 -1.971 1.00 -0.77 \ ATOM 51 CA SER H 395 31.630 24.881 -1.487 1.00 -0.77 \ ATOM 52 C SER H 395 31.215 26.079 -2.353 1.00 -0.77 \ ATOM 53 O SER H 395 31.851 27.133 -2.319 1.00 -0.77 \ ATOM 54 CB SER H 395 33.150 24.863 -1.246 1.00 -0.77 \ ATOM 55 OG SER H 395 33.455 24.261 0.001 1.00 -0.77 \ ATOM 56 N LYS H 396 30.143 25.916 -3.120 1.00 -0.81 \ ATOM 57 CA LYS H 396 29.561 27.019 -3.877 1.00 -0.81 \ ATOM 58 C LYS H 396 28.925 27.989 -2.887 1.00 -0.81 \ ATOM 59 O LYS H 396 28.130 27.571 -2.053 1.00 -0.81 \ ATOM 60 CB LYS H 396 28.497 26.484 -4.839 1.00 -0.81 \ ATOM 61 CG LYS H 396 28.486 27.135 -6.210 1.00 -0.81 \ ATOM 62 CD LYS H 396 29.572 26.555 -7.139 1.00 -0.81 \ ATOM 63 CE LYS H 396 29.150 25.232 -7.784 1.00 -0.81 \ ATOM 64 NZ LYS H 396 27.940 25.375 -8.664 1.00 -0.81 \ ATOM 65 N CYS H 397 29.291 29.269 -2.959 1.00 -0.52 \ ATOM 66 CA CYS H 397 28.673 30.300 -2.119 1.00 -0.52 \ ATOM 67 C CYS H 397 27.168 30.312 -2.350 1.00 -0.52 \ ATOM 68 O CYS H 397 26.711 30.252 -3.494 1.00 -0.52 \ ATOM 69 CB CYS H 397 29.259 31.682 -2.419 1.00 -0.52 \ ATOM 70 SG CYS H 397 28.684 33.013 -1.304 1.00 -0.52 \ ATOM 71 N LEU H 398 26.398 30.386 -1.267 1.00 0.70 \ ATOM 72 CA LEU H 398 24.938 30.334 -1.380 1.00 0.70 \ ATOM 73 C LEU H 398 24.225 31.661 -1.089 1.00 0.70 \ ATOM 74 O LEU H 398 22.995 31.702 -1.013 1.00 0.70 \ ATOM 75 CB LEU H 398 24.367 29.206 -0.507 1.00 0.70 \ ATOM 76 CG LEU H 398 24.885 27.793 -0.789 1.00 0.70 \ ATOM 77 CD1 LEU H 398 24.433 26.839 0.290 1.00 0.70 \ ATOM 78 CD2 LEU H 398 24.439 27.311 -2.161 1.00 0.70 \ ATOM 79 N ILE H 399 24.987 32.740 -0.931 1.00 -0.01 \ ATOM 80 CA ILE H 399 24.389 34.051 -0.661 1.00 -0.01 \ ATOM 81 C ILE H 399 23.612 34.517 -1.893 1.00 -0.01 \ ATOM 82 O ILE H 399 24.154 34.572 -2.998 1.00 -0.01 \ ATOM 83 CB ILE H 399 25.440 35.101 -0.170 1.00 -0.01 \ ATOM 84 CG1 ILE H 399 25.641 34.995 1.345 1.00 -0.01 \ ATOM 85 CG2 ILE H 399 25.010 36.533 -0.487 1.00 -0.01 \ ATOM 86 CD1 ILE H 399 26.718 34.040 1.769 1.00 -0.01 \ ATOM 87 N GLY H 400 22.328 34.802 -1.691 1.00 -0.21 \ ATOM 88 CA GLY H 400 21.437 35.222 -2.769 1.00 -0.21 \ ATOM 89 C GLY H 400 21.021 34.072 -3.662 1.00 -0.21 \ ATOM 90 O GLY H 400 20.512 34.285 -4.757 1.00 -0.21 \ ATOM 91 N GLN H 401 21.231 32.851 -3.177 1.00 -0.56 \ ATOM 92 CA GLN H 401 20.993 31.637 -3.953 1.00 -0.56 \ ATOM 93 C GLN H 401 20.005 30.720 -3.246 1.00 -0.56 \ ATOM 94 O GLN H 401 19.781 30.851 -2.048 1.00 -0.56 \ ATOM 95 CB GLN H 401 22.315 30.881 -4.180 1.00 -0.56 \ ATOM 96 CG GLN H 401 23.443 31.710 -4.801 1.00 -0.56 \ ATOM 97 CD GLN H 401 23.116 32.210 -6.205 1.00 -0.56 \ ATOM 98 OE1 GLN H 401 22.908 31.418 -7.122 1.00 -0.56 \ ATOM 99 NE2 GLN H 401 23.078 33.532 -6.377 1.00 -0.56 \ ATOM 100 N LYS H 402 19.419 29.794 -3.998 1.00 -0.41 \ ATOM 101 CA LYS H 402 18.631 28.709 -3.419 1.00 -0.41 \ ATOM 102 C LYS H 402 19.545 27.808 -2.594 1.00 -0.41 \ ATOM 103 O LYS H 402 20.689 27.552 -2.971 1.00 -0.41 \ ATOM 104 CB LYS H 402 17.937 27.894 -4.515 1.00 -0.41 \ ATOM 105 N PHE H 403 19.041 27.345 -1.457 1.00 1.27 \ ATOM 106 CA PHE H 403 19.812 26.463 -0.595 1.00 1.27 \ ATOM 107 C PHE H 403 18.921 25.423 0.060 1.00 1.27 \ ATOM 108 O PHE H 403 17.751 25.682 0.339 1.00 1.27 \ ATOM 109 CB PHE H 403 20.588 27.266 0.455 1.00 1.27 \ ATOM 110 CG PHE H 403 19.721 27.933 1.487 1.00 1.27 \ ATOM 111 CD1 PHE H 403 19.037 29.105 1.191 1.00 1.27 \ ATOM 112 CD2 PHE H 403 19.612 27.397 2.766 1.00 1.27 \ ATOM 113 CE1 PHE H 403 18.238 29.725 2.151 1.00 1.27 \ ATOM 114 CE2 PHE H 403 18.826 28.010 3.730 1.00 1.27 \ ATOM 115 CZ PHE H 403 18.135 29.175 3.424 1.00 1.27 \ ATOM 116 N MET H 404 19.483 24.246 0.302 1.00 -0.19 \ ATOM 117 CA MET H 404 18.726 23.143 0.883 1.00 -0.19 \ ATOM 118 C MET H 404 19.346 22.684 2.210 1.00 -0.19 \ ATOM 119 O MET H 404 20.320 21.931 2.221 1.00 -0.19 \ ATOM 120 CB MET H 404 18.596 22.002 -0.132 1.00 -0.19 \ ATOM 121 CG MET H 404 17.831 22.416 -1.393 1.00 -0.19 \ ATOM 122 SD MET H 404 18.231 21.477 -2.882 1.00 -0.19 \ ATOM 123 CE MET H 404 17.285 19.977 -2.600 1.00 -0.19 \ ATOM 124 N PRO H 405 18.781 23.150 3.339 1.00 -0.80 \ ATOM 125 CA PRO H 405 19.370 22.857 4.634 1.00 -0.80 \ ATOM 126 C PRO H 405 18.996 21.469 5.124 1.00 -0.80 \ ATOM 127 O PRO H 405 17.816 21.130 5.202 1.00 -0.80 \ ATOM 128 CB PRO H 405 18.767 23.930 5.560 1.00 -0.80 \ ATOM 129 CG PRO H 405 17.851 24.749 4.719 1.00 -0.80 \ ATOM 130 CD PRO H 405 17.563 23.961 3.481 1.00 -0.80 \ ATOM 131 N VAL H 406 20.007 20.664 5.421 1.00 -0.44 \ ATOM 132 CA VAL H 406 19.795 19.382 6.070 1.00 -0.44 \ ATOM 133 C VAL H 406 20.535 19.472 7.383 1.00 -0.44 \ ATOM 134 O VAL H 406 21.758 19.336 7.422 1.00 -0.44 \ ATOM 135 CB VAL H 406 20.314 18.195 5.235 1.00 -0.44 \ ATOM 136 CG1 VAL H 406 20.036 16.875 5.957 1.00 -0.44 \ ATOM 137 CG2 VAL H 406 19.671 18.189 3.857 1.00 -0.44 \ ATOM 138 N GLU H 407 19.776 19.723 8.449 1.00 -0.47 \ ATOM 139 CA GLU H 407 20.321 20.030 9.774 1.00 -0.47 \ ATOM 140 C GLU H 407 21.362 21.143 9.668 1.00 -0.47 \ ATOM 141 O GLU H 407 21.064 22.211 9.130 1.00 -0.47 \ ATOM 142 CB GLU H 407 20.876 18.774 10.460 1.00 -0.47 \ ATOM 143 CG GLU H 407 19.972 17.553 10.330 1.00 -0.47 \ ATOM 144 CD GLU H 407 19.619 16.948 11.669 1.00 -0.47 \ ATOM 145 OE1 GLU H 407 18.784 16.011 11.705 1.00 -0.47 \ ATOM 146 OE2 GLU H 407 20.169 17.417 12.688 1.00 -0.47 \ ATOM 147 N GLY H 408 22.575 20.891 10.155 1.00 -0.17 \ ATOM 148 CA GLY H 408 23.652 21.884 10.102 1.00 -0.17 \ ATOM 149 C GLY H 408 24.336 22.036 8.751 1.00 -0.17 \ ATOM 150 O GLY H 408 25.201 22.896 8.593 1.00 -0.17 \ ATOM 151 N MET H 409 23.962 21.190 7.790 1.00 -0.80 \ ATOM 152 CA MET H 409 24.473 21.265 6.418 1.00 -0.80 \ ATOM 153 C MET H 409 23.557 22.112 5.531 1.00 -0.80 \ ATOM 154 O MET H 409 22.371 22.253 5.816 1.00 -0.80 \ ATOM 155 CB MET H 409 24.621 19.859 5.823 1.00 -0.80 \ ATOM 156 CG MET H 409 25.599 18.971 6.581 1.00 -0.80 \ ATOM 157 SD MET H 409 25.644 17.228 6.110 1.00 -0.80 \ ATOM 158 CE MET H 409 23.992 16.672 6.532 1.00 -0.80 \ ATOM 159 N VAL H 410 24.121 22.685 4.471 1.00 -0.62 \ ATOM 160 CA VAL H 410 23.352 23.408 3.447 1.00 -0.62 \ ATOM 161 C VAL H 410 23.865 23.062 2.049 1.00 -0.62 \ ATOM 162 O VAL H 410 25.078 22.984 1.833 1.00 -0.62 \ ATOM 163 CB VAL H 410 23.369 24.958 3.644 1.00 -0.62 \ ATOM 164 CG1 VAL H 410 22.316 25.390 4.650 1.00 -0.62 \ ATOM 165 CG2 VAL H 410 24.753 25.455 4.066 1.00 -0.62 \ ATOM 166 N PHE H 411 22.944 22.871 1.105 1.00 0.51 \ ATOM 167 CA PHE H 411 23.312 22.437 -0.242 1.00 0.51 \ ATOM 168 C PHE H 411 22.808 23.366 -1.354 1.00 0.51 \ ATOM 169 O PHE H 411 21.775 24.019 -1.219 1.00 0.51 \ ATOM 170 CB PHE H 411 22.842 20.995 -0.488 1.00 0.51 \ ATOM 171 CG PHE H 411 23.377 19.999 0.513 1.00 0.51 \ ATOM 172 CD1 PHE H 411 24.608 19.390 0.316 1.00 0.51 \ ATOM 173 CD2 PHE H 411 22.645 19.667 1.650 1.00 0.51 \ ATOM 174 CE1 PHE H 411 25.103 18.466 1.237 1.00 0.51 \ ATOM 175 CE2 PHE H 411 23.134 18.742 2.572 1.00 0.51 \ ATOM 176 CZ PHE H 411 24.366 18.141 2.362 1.00 0.51 \ ATOM 177 N CYS H 412 23.547 23.401 -2.458 1.00 2.12 \ ATOM 178 CA CYS H 412 23.179 24.217 -3.609 1.00 2.12 \ ATOM 179 C CYS H 412 22.148 23.553 -4.516 1.00 2.12 \ ATOM 180 O CYS H 412 21.495 24.234 -5.311 1.00 2.12 \ ATOM 181 CB CYS H 412 24.425 24.578 -4.430 1.00 2.12 \ ATOM 182 SG CYS H 412 25.169 23.197 -5.319 1.00 2.12 \ ATOM 183 N SER H 413 22.004 22.231 -4.400 1.00 -1.00 \ ATOM 184 CA SER H 413 21.277 21.454 -5.406 1.00 -1.00 \ ATOM 185 C SER H 413 20.790 20.083 -4.930 1.00 -1.00 \ ATOM 186 O SER H 413 21.148 19.631 -3.839 1.00 -1.00 \ ATOM 187 CB SER H 413 22.160 21.286 -6.648 1.00 -1.00 \ ATOM 188 OG SER H 413 23.366 20.624 -6.308 1.00 -1.00 \ ATOM 189 N VAL H 414 20.010 19.428 -5.797 1.00 -0.92 \ ATOM 190 CA VAL H 414 19.342 18.125 -5.558 1.00 -0.92 \ ATOM 191 C VAL H 414 20.003 17.025 -4.681 1.00 -0.92 \ ATOM 192 O VAL H 414 19.305 16.540 -3.789 1.00 -0.92 \ ATOM 193 CB VAL H 414 18.742 17.507 -6.863 1.00 -0.92 \ ATOM 194 N GLU H 415 21.246 16.550 -4.872 1.00 -0.76 \ ATOM 195 CA GLU H 415 22.202 16.637 -6.002 1.00 -0.76 \ ATOM 196 C GLU H 415 23.605 16.645 -5.392 1.00 -0.76 \ ATOM 197 O GLU H 415 24.337 15.657 -5.480 1.00 -0.76 \ ATOM 198 CB GLU H 415 22.008 17.822 -6.929 1.00 -0.76 \ ATOM 199 CG GLU H 415 22.615 17.617 -8.299 1.00 -0.76 \ ATOM 200 CD GLU H 415 21.750 18.206 -9.384 1.00 -0.76 \ ATOM 201 OE1 GLU H 415 21.671 19.450 -9.477 1.00 -0.76 \ ATOM 202 OE2 GLU H 415 21.142 17.416 -10.135 1.00 -0.76 \ ATOM 203 N CYS H 416 23.963 17.764 -4.766 1.00 2.12 \ ATOM 204 CA CYS H 416 25.061 17.800 -3.807 1.00 2.12 \ ATOM 205 C CYS H 416 24.542 17.197 -2.512 1.00 2.12 \ ATOM 206 O CYS H 416 25.282 16.554 -1.762 1.00 2.12 \ ATOM 207 CB CYS H 416 25.520 19.237 -3.563 1.00 2.12 \ ATOM 208 SG CYS H 416 26.778 19.825 -4.709 1.00 2.12 \ ATOM 209 N LYS H 417 23.251 17.425 -2.274 1.00 0.12 \ ATOM 210 CA LYS H 417 22.519 16.887 -1.134 1.00 0.12 \ ATOM 211 C LYS H 417 22.474 15.364 -1.182 1.00 0.12 \ ATOM 212 O LYS H 417 22.707 14.707 -0.166 1.00 0.12 \ ATOM 213 CB LYS H 417 21.103 17.477 -1.108 1.00 0.12 \ ATOM 214 CG LYS H 417 20.203 16.993 0.020 1.00 0.12 \ ATOM 215 CD LYS H 417 18.843 17.660 -0.076 1.00 0.12 \ ATOM 216 CE LYS H 417 17.854 17.083 0.923 1.00 0.12 \ ATOM 217 NZ LYS H 417 16.555 17.831 0.919 1.00 0.12 \ ATOM 218 N LYS H 418 22.184 14.817 -2.364 1.00 -0.23 \ ATOM 219 CA LYS H 418 22.117 13.364 -2.568 1.00 -0.23 \ ATOM 220 C LYS H 418 23.473 12.675 -2.394 1.00 -0.23 \ ATOM 221 O LYS H 418 23.528 11.508 -1.998 1.00 -0.23 \ ATOM 222 CB LYS H 418 21.516 13.024 -3.934 1.00 -0.23 \ ATOM 223 N ARG H 419 24.556 13.400 -2.680 1.00 -0.50 \ ATOM 224 CA ARG H 419 25.917 12.903 -2.449 1.00 -0.50 \ ATOM 225 C ARG H 419 26.247 12.778 -0.961 1.00 -0.50 \ ATOM 226 O ARG H 419 27.148 12.035 -0.580 1.00 -0.50 \ ATOM 227 CB ARG H 419 26.946 13.809 -3.125 1.00 -0.50 \ ATOM 228 CG ARG H 419 26.957 13.724 -4.641 1.00 -0.50 \ ATOM 229 CD ARG H 419 28.027 14.624 -5.238 1.00 -0.50 \ ATOM 230 NE ARG H 419 29.379 14.174 -4.908 1.00 -0.50 \ ATOM 231 CZ ARG H 419 30.491 14.674 -5.445 1.00 -0.50 \ ATOM 232 NH1 ARG H 419 30.425 15.649 -6.348 1.00 -0.50 \ ATOM 233 NH2 ARG H 419 31.676 14.194 -5.083 1.00 -0.50 \ ATOM 234 N MET H 420 25.518 13.521 -0.133 1.00 -1.00 \ ATOM 235 CA MET H 420 25.686 13.483 1.314 1.00 -1.00 \ ATOM 236 C MET H 420 24.403 12.994 1.980 1.00 -1.00 \ ATOM 237 O MET H 420 24.365 12.766 3.190 1.00 -1.00 \ ATOM 238 CB MET H 420 26.080 14.868 1.846 1.00 -1.00 \ ATOM 239 CG MET H 420 27.445 15.360 1.360 1.00 -1.00 \ ATOM 240 SD MET H 420 28.022 16.895 2.116 1.00 -1.00 \ ATOM 241 CE MET H 420 28.181 16.388 3.820 1.00 -1.00 \ """, "e2iybH1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2iybH1_csv", state=0, origin=1) cmd.zoom("e2iybH1_csv", animate=-1)