cmd.read_pdbstr("""\ ATOM 1 N ALA H 358 27.108 36.429 21.649 1.00 -0.09 \ ATOM 2 CA ALA H 358 27.716 35.068 21.495 1.00 -0.09 \ ATOM 3 C ALA H 358 26.935 34.177 20.520 1.00 -0.09 \ ATOM 4 O ALA H 358 26.232 33.245 20.934 1.00 -0.09 \ ATOM 5 CB ALA H 358 27.875 34.382 22.861 1.00 -0.09 \ ATOM 6 N VAL H 359 27.046 34.487 19.230 1.00 0.28 \ ATOM 7 CA VAL H 359 26.642 33.553 18.181 1.00 0.28 \ ATOM 8 C VAL H 359 27.887 33.069 17.444 1.00 0.28 \ ATOM 9 O VAL H 359 28.748 33.870 17.072 1.00 0.28 \ ATOM 10 CB VAL H 359 25.639 34.172 17.181 1.00 0.28 \ ATOM 11 CG1 VAL H 359 25.440 33.253 15.993 1.00 0.28 \ ATOM 12 CG2 VAL H 359 24.301 34.442 17.853 1.00 0.28 \ ATOM 13 N VAL H 360 27.976 31.757 17.253 1.00 -0.57 \ ATOM 14 CA VAL H 360 29.101 31.140 16.572 1.00 -0.57 \ ATOM 15 C VAL H 360 28.673 30.672 15.183 1.00 -0.57 \ ATOM 16 O VAL H 360 27.625 30.046 15.033 1.00 -0.57 \ ATOM 17 CB VAL H 360 29.699 29.985 17.427 1.00 -0.57 \ ATOM 18 CG1 VAL H 360 30.541 29.023 16.587 1.00 -0.57 \ ATOM 19 CG2 VAL H 360 30.523 30.561 18.581 1.00 -0.57 \ ATOM 20 N CYS H 361 29.486 30.998 14.176 1.00 2.07 \ ATOM 21 CA CYS H 361 29.214 30.635 12.791 1.00 2.07 \ ATOM 22 C CYS H 361 29.180 29.128 12.593 1.00 2.07 \ ATOM 23 O CYS H 361 30.095 28.415 13.005 1.00 2.07 \ ATOM 24 CB CYS H 361 30.248 31.253 11.851 1.00 2.07 \ ATOM 25 SG CYS H 361 29.942 30.943 10.073 1.00 2.07 \ ATOM 26 N GLN H 362 28.114 28.660 11.952 1.00 -0.96 \ ATOM 27 CA GLN H 362 27.924 27.241 11.667 1.00 -0.96 \ ATOM 28 C GLN H 362 28.948 26.749 10.631 1.00 -0.96 \ ATOM 29 O GLN H 362 29.307 25.568 10.595 1.00 -0.96 \ ATOM 30 CB GLN H 362 26.470 26.994 11.215 1.00 -0.96 \ ATOM 31 CG GLN H 362 26.101 25.560 10.813 1.00 -0.96 \ ATOM 32 CD GLN H 362 26.430 24.515 11.876 1.00 -0.96 \ ATOM 33 OE1 GLN H 362 26.929 23.439 11.553 1.00 -0.96 \ ATOM 34 NE2 GLN H 362 26.149 24.823 13.140 1.00 -0.96 \ ATOM 35 N GLY H 363 29.439 27.668 9.813 1.00 -0.64 \ ATOM 36 CA GLY H 363 30.373 27.311 8.751 1.00 -0.64 \ ATOM 37 C GLY H 363 31.820 27.259 9.198 1.00 -0.64 \ ATOM 38 O GLY H 363 32.530 26.320 8.872 1.00 -0.64 \ ATOM 39 N CYS H 364 32.258 28.272 9.942 1.00 2.07 \ ATOM 40 CA CYS H 364 33.666 28.387 10.321 1.00 2.07 \ ATOM 41 C CYS H 364 33.935 28.157 11.808 1.00 2.07 \ ATOM 42 O CYS H 364 35.096 28.075 12.225 1.00 2.07 \ ATOM 43 CB CYS H 364 34.228 29.742 9.880 1.00 2.07 \ ATOM 44 SG CYS H 364 33.564 31.160 10.771 1.00 2.07 \ ATOM 45 N HIS H 365 32.864 28.058 12.596 1.00 -0.80 \ ATOM 46 CA HIS H 365 32.953 27.861 14.048 1.00 -0.80 \ ATOM 47 C HIS H 365 33.680 28.993 14.802 1.00 -0.80 \ ATOM 48 O HIS H 365 34.269 28.774 15.868 1.00 -0.80 \ ATOM 49 CB HIS H 365 33.555 26.483 14.381 1.00 -0.80 \ ATOM 50 CG HIS H 365 33.286 26.028 15.781 1.00 -0.80 \ ATOM 51 ND1 HIS H 365 32.029 25.662 16.214 1.00 -0.80 \ ATOM 52 CD2 HIS H 365 34.111 25.875 16.844 1.00 -0.80 \ ATOM 53 CE1 HIS H 365 32.091 25.308 17.487 1.00 -0.80 \ ATOM 54 NE2 HIS H 365 33.343 25.431 17.893 1.00 -0.80 \ ATOM 55 N ASN H 366 33.632 30.200 14.243 1.00 -0.19 \ ATOM 56 CA ASN H 366 34.134 31.398 14.921 1.00 -0.19 \ ATOM 57 C ASN H 366 32.978 32.353 15.175 1.00 -0.19 \ ATOM 58 O ASN H 366 31.972 32.317 14.465 1.00 -0.19 \ ATOM 59 CB ASN H 366 35.218 32.091 14.090 1.00 -0.19 \ ATOM 60 CG ASN H 366 36.441 31.211 13.870 1.00 -0.19 \ ATOM 61 OD1 ASN H 366 37.109 30.801 14.826 1.00 -0.19 \ ATOM 62 ND2 ASN H 366 36.740 30.920 12.606 1.00 -0.19 \ ATOM 63 N ALA H 367 33.129 33.202 16.184 1.00 -0.87 \ ATOM 64 CA ALA H 367 32.073 34.117 16.615 1.00 -0.87 \ ATOM 65 C ALA H 367 31.610 35.047 15.495 1.00 -0.87 \ ATOM 66 O ALA H 367 32.414 35.486 14.676 1.00 -0.87 \ ATOM 67 CB ALA H 367 32.539 34.925 17.826 1.00 -0.87 \ ATOM 68 N ILE H 368 30.309 35.319 15.451 1.00 1.33 \ ATOM 69 CA ILE H 368 29.773 36.337 14.553 1.00 1.33 \ ATOM 70 C ILE H 368 29.602 37.622 15.352 1.00 1.33 \ ATOM 71 O ILE H 368 29.041 37.600 16.448 1.00 1.33 \ ATOM 72 CB ILE H 368 28.418 35.926 13.891 1.00 1.33 \ ATOM 73 CG1 ILE H 368 28.508 34.529 13.254 1.00 1.33 \ ATOM 74 CG2 ILE H 368 27.979 36.978 12.861 1.00 1.33 \ ATOM 75 CD1 ILE H 368 27.224 34.038 12.608 1.00 1.33 \ ATOM 76 N ASP H 369 30.115 38.724 14.809 1.00 -0.95 \ ATOM 77 CA ASP H 369 29.975 40.053 15.409 1.00 -0.95 \ ATOM 78 C ASP H 369 28.495 40.419 15.577 1.00 -0.95 \ ATOM 79 O ASP H 369 27.761 40.504 14.593 1.00 -0.95 \ ATOM 80 CB ASP H 369 30.689 41.097 14.535 1.00 -0.95 \ ATOM 81 CG ASP H 369 30.744 42.482 15.173 1.00 -0.95 \ ATOM 82 OD1 ASP H 369 29.786 42.899 15.871 1.00 -0.95 \ ATOM 83 OD2 ASP H 369 31.757 43.179 14.949 1.00 -0.95 \ ATOM 84 N PRO H 370 28.053 40.639 16.827 1.00 -0.17 \ ATOM 85 CA PRO H 370 26.667 41.030 17.076 1.00 -0.17 \ ATOM 86 C PRO H 370 26.166 42.176 16.179 1.00 -0.17 \ ATOM 87 O PRO H 370 24.984 42.196 15.827 1.00 -0.17 \ ATOM 88 CB PRO H 370 26.674 41.456 18.554 1.00 -0.17 \ ATOM 89 CG PRO H 370 28.114 41.447 18.987 1.00 -0.17 \ ATOM 90 CD PRO H 370 28.825 40.527 18.078 1.00 -0.17 \ ATOM 91 N GLU H 371 27.059 43.096 15.803 1.00 -0.54 \ ATOM 92 CA GLU H 371 26.704 44.263 14.984 1.00 -0.54 \ ATOM 93 C GLU H 371 26.465 43.978 13.486 1.00 -0.54 \ ATOM 94 O GLU H 371 25.881 44.811 12.787 1.00 -0.54 \ ATOM 95 CB GLU H 371 27.767 45.368 15.118 1.00 -0.54 \ ATOM 96 CG GLU H 371 27.706 46.198 16.408 1.00 -0.54 \ ATOM 97 CD GLU H 371 28.684 47.385 16.393 1.00 -0.54 \ ATOM 98 OE1 GLU H 371 28.731 48.116 15.374 1.00 -0.54 \ ATOM 99 OE2 GLU H 371 29.402 47.598 17.402 1.00 -0.54 \ ATOM 100 N VAL H 372 26.914 42.831 12.983 1.00 -1.00 \ ATOM 101 CA VAL H 372 26.861 42.600 11.529 1.00 -1.00 \ ATOM 102 C VAL H 372 25.612 41.853 11.072 1.00 -1.00 \ ATOM 103 O VAL H 372 25.002 41.119 11.852 1.00 -1.00 \ ATOM 104 CB VAL H 372 28.134 41.891 10.980 1.00 -1.00 \ ATOM 105 CG1 VAL H 372 29.401 42.703 11.291 1.00 -1.00 \ ATOM 106 CG2 VAL H 372 28.236 40.462 11.499 1.00 -1.00 \ ATOM 107 N GLN H 373 25.231 42.035 9.808 1.00 -0.90 \ ATOM 108 CA GLN H 373 24.194 41.184 9.243 1.00 -0.90 \ ATOM 109 C GLN H 373 24.811 39.829 8.922 1.00 -0.90 \ ATOM 110 O GLN H 373 26.001 39.731 8.618 1.00 -0.90 \ ATOM 111 CB GLN H 373 23.464 41.828 8.053 1.00 -0.90 \ ATOM 112 CG GLN H 373 24.101 41.690 6.687 1.00 -0.90 \ ATOM 113 CD GLN H 373 23.685 40.422 5.951 1.00 -0.90 \ ATOM 114 OE1 GLN H 373 22.582 39.901 6.133 1.00 -0.90 \ ATOM 115 NE2 GLN H 373 24.570 39.926 5.111 1.00 -0.90 \ ATOM 116 N ARG H 374 23.999 38.787 9.045 1.00 -0.83 \ ATOM 117 CA ARG H 374 24.457 37.421 8.867 1.00 -0.83 \ ATOM 118 C ARG H 374 23.321 36.587 8.305 1.00 -0.83 \ ATOM 119 O ARG H 374 22.148 36.962 8.416 1.00 -0.83 \ ATOM 120 CB ARG H 374 24.980 36.842 10.199 1.00 -0.83 \ ATOM 121 CG ARG H 374 23.918 36.418 11.225 1.00 -0.83 \ ATOM 122 CD ARG H 374 23.127 37.589 11.829 1.00 -0.83 \ ATOM 123 NE ARG H 374 23.968 38.572 12.514 1.00 -0.83 \ ATOM 124 CZ ARG H 374 24.406 38.451 13.766 1.00 -0.83 \ ATOM 125 NH1 ARG H 374 24.102 37.381 14.488 1.00 -0.83 \ ATOM 126 NH2 ARG H 374 25.167 39.399 14.296 1.00 -0.83 \ ATOM 127 N VAL H 375 23.672 35.469 7.683 1.00 -0.05 \ ATOM 128 CA VAL H 375 22.676 34.526 7.198 1.00 -0.05 \ ATOM 129 C VAL H 375 22.144 33.750 8.393 1.00 -0.05 \ ATOM 130 O VAL H 375 22.891 33.411 9.319 1.00 -0.05 \ ATOM 131 CB VAL H 375 23.253 33.543 6.144 1.00 -0.05 \ ATOM 132 CG1 VAL H 375 22.139 32.677 5.543 1.00 -0.05 \ ATOM 133 CG2 VAL H 375 23.982 34.300 5.038 1.00 -0.05 \ ATOM 134 N THR H 376 20.843 33.496 8.377 1.00 -0.62 \ ATOM 135 CA THR H 376 20.206 32.733 9.429 1.00 -0.62 \ ATOM 136 C THR H 376 19.121 31.819 8.862 1.00 -0.62 \ ATOM 137 O THR H 376 18.365 32.203 7.964 1.00 -0.62 \ ATOM 138 CB THR H 376 19.652 33.654 10.551 1.00 -0.62 \ ATOM 139 OG1 THR H 376 19.379 32.871 11.720 1.00 -0.62 \ ATOM 140 CG2 THR H 376 18.376 34.403 10.113 1.00 -0.62 \ ATOM 141 N TYR H 377 19.085 30.593 9.366 1.00 0.69 \ ATOM 142 CA TYR H 377 18.000 29.677 9.077 1.00 0.69 \ ATOM 143 C TYR H 377 17.685 28.908 10.344 1.00 0.69 \ ATOM 144 O TYR H 377 18.479 28.079 10.797 1.00 0.69 \ ATOM 145 CB TYR H 377 18.341 28.721 7.929 1.00 0.69 \ ATOM 146 CG TYR H 377 17.305 27.626 7.746 1.00 0.69 \ ATOM 147 CD1 TYR H 377 16.105 27.875 7.068 1.00 0.69 \ ATOM 148 CD2 TYR H 377 17.519 26.345 8.260 1.00 0.69 \ ATOM 149 CE1 TYR H 377 15.152 26.873 6.907 1.00 0.69 \ ATOM 150 CE2 TYR H 377 16.569 25.339 8.106 1.00 0.69 \ ATOM 151 CZ TYR H 377 15.391 25.606 7.428 1.00 0.69 \ ATOM 152 OH TYR H 377 14.454 24.603 7.271 1.00 0.69 \ ATOM 153 N ASN H 378 16.514 29.191 10.902 1.00 -0.82 \ ATOM 154 CA ASN H 378 16.109 28.658 12.194 1.00 -0.82 \ ATOM 155 C ASN H 378 17.170 28.963 13.251 1.00 -0.82 \ ATOM 156 O ASN H 378 17.402 30.134 13.558 1.00 -0.82 \ ATOM 157 CB ASN H 378 15.764 27.162 12.099 1.00 -0.82 \ ATOM 158 CG ASN H 378 14.560 26.892 11.191 1.00 -0.82 \ ATOM 159 OD1 ASN H 378 13.750 27.786 10.919 1.00 -0.82 \ ATOM 160 ND2 ASN H 378 14.436 25.650 10.725 1.00 -0.82 \ ATOM 161 N ASN H 379 17.832 27.935 13.778 1.00 0.33 \ ATOM 162 CA ASN H 379 18.784 28.142 14.869 1.00 0.33 \ ATOM 163 C ASN H 379 20.259 28.130 14.453 1.00 0.33 \ ATOM 164 O ASN H 379 21.151 28.175 15.304 1.00 0.33 \ ATOM 165 CB ASN H 379 18.513 27.149 16.001 1.00 0.33 \ ATOM 166 CG ASN H 379 17.101 27.254 16.532 1.00 0.33 \ ATOM 167 OD1 ASN H 379 16.561 28.355 16.665 1.00 0.33 \ ATOM 168 ND2 ASN H 379 16.488 26.110 16.833 1.00 0.33 \ ATOM 169 N PHE H 380 20.502 28.080 13.146 1.00 -0.97 \ ATOM 170 CA PHE H 380 21.858 28.160 12.605 1.00 -0.97 \ ATOM 171 C PHE H 380 22.151 29.546 12.069 1.00 -0.97 \ ATOM 172 O PHE H 380 21.292 30.179 11.451 1.00 -0.97 \ ATOM 173 CB PHE H 380 22.075 27.132 11.499 1.00 -0.97 \ ATOM 174 CG PHE H 380 21.950 25.714 11.959 1.00 -0.97 \ ATOM 175 CD1 PHE H 380 22.968 25.116 12.689 1.00 -0.97 \ ATOM 176 CD2 PHE H 380 20.807 24.972 11.663 1.00 -0.97 \ ATOM 177 CE1 PHE H 380 22.855 23.794 13.124 1.00 -0.97 \ ATOM 178 CE2 PHE H 380 20.680 23.645 12.094 1.00 -0.97 \ ATOM 179 CZ PHE H 380 21.706 23.058 12.828 1.00 -0.97 \ ATOM 180 N SER H 381 23.373 30.006 12.316 1.00 -0.71 \ ATOM 181 CA SER H 381 23.850 31.286 11.810 1.00 -0.71 \ ATOM 182 C SER H 381 25.162 31.120 11.054 1.00 -0.71 \ ATOM 183 O SER H 381 26.054 30.380 11.485 1.00 -0.71 \ ATOM 184 CB SER H 381 24.025 32.276 12.954 1.00 -0.71 \ ATOM 185 OG SER H 381 22.771 32.667 13.486 1.00 -0.71 \ ATOM 186 N TRP H 382 25.256 31.795 9.911 1.00 1.47 \ ATOM 187 CA TRP H 382 26.467 31.804 9.100 1.00 1.47 \ ATOM 188 C TRP H 382 26.885 33.244 8.826 1.00 1.47 \ ATOM 189 O TRP H 382 26.029 34.105 8.579 1.00 1.47 \ ATOM 190 CB TRP H 382 26.238 31.115 7.752 1.00 1.47 \ ATOM 191 CG TRP H 382 25.961 29.636 7.796 1.00 1.47 \ ATOM 192 CD1 TRP H 382 26.879 28.620 7.684 1.00 1.47 \ ATOM 193 CD2 TRP H 382 24.679 29.004 7.911 1.00 1.47 \ ATOM 194 NE1 TRP H 382 26.246 27.403 7.735 1.00 1.47 \ ATOM 195 CE2 TRP H 382 24.898 27.605 7.877 1.00 1.47 \ ATOM 196 CE3 TRP H 382 23.366 29.483 8.046 1.00 1.47 \ ATOM 197 CZ2 TRP H 382 23.854 26.679 7.979 1.00 1.47 \ ATOM 198 CZ3 TRP H 382 22.324 28.558 8.141 1.00 1.47 \ ATOM 199 CH2 TRP H 382 22.576 27.173 8.104 1.00 1.47 \ ATOM 200 N HIS H 383 28.194 33.503 8.870 1.00 2.07 \ ATOM 201 CA HIS H 383 28.735 34.738 8.333 1.00 2.07 \ ATOM 202 C HIS H 383 28.183 34.845 6.921 1.00 2.07 \ ATOM 203 O HIS H 383 28.187 33.858 6.177 1.00 2.07 \ ATOM 204 CB HIS H 383 30.269 34.698 8.254 1.00 2.07 \ ATOM 205 CG HIS H 383 30.966 34.921 9.560 1.00 2.07 \ ATOM 206 ND1 HIS H 383 31.716 33.943 10.178 1.00 2.07 \ ATOM 207 CD2 HIS H 383 31.054 36.019 10.350 1.00 2.07 \ ATOM 208 CE1 HIS H 383 32.223 34.424 11.299 1.00 2.07 \ ATOM 209 NE2 HIS H 383 31.836 35.681 11.427 1.00 2.07 \ ATOM 210 N ALA H 384 27.684 36.027 6.561 1.00 -0.73 \ ATOM 211 CA ALA H 384 27.285 36.295 5.183 1.00 -0.73 \ ATOM 212 C ALA H 384 28.557 36.550 4.388 1.00 -0.73 \ ATOM 213 O ALA H 384 28.868 37.678 3.983 1.00 -0.73 \ ATOM 214 CB ALA H 384 26.344 37.470 5.109 1.00 -0.73 \ ATOM 215 N SER H 385 29.300 35.465 4.207 1.00 -0.52 \ ATOM 216 CA SER H 385 30.606 35.486 3.579 1.00 -0.52 \ ATOM 217 C SER H 385 30.714 34.322 2.623 1.00 -0.52 \ ATOM 218 O SER H 385 30.118 33.260 2.840 1.00 -0.52 \ ATOM 219 CB SER H 385 31.700 35.383 4.641 1.00 -0.52 \ ATOM 220 OG SER H 385 32.918 34.931 4.079 1.00 -0.52 \ ATOM 221 N THR H 386 31.485 34.541 1.565 1.00 0.65 \ ATOM 222 CA THR H 386 31.849 33.503 0.605 1.00 0.65 \ ATOM 223 C THR H 386 32.563 32.321 1.268 1.00 0.65 \ ATOM 224 O THR H 386 32.478 31.191 0.789 1.00 0.65 \ ATOM 225 CB THR H 386 32.766 34.087 -0.482 1.00 0.65 \ ATOM 226 OG1 THR H 386 33.830 34.819 0.142 1.00 0.65 \ ATOM 227 CG2 THR H 386 31.987 35.040 -1.387 1.00 0.65 \ ATOM 228 N GLU H 387 33.257 32.587 2.372 1.00 -1.00 \ ATOM 229 CA GLU H 387 34.047 31.565 3.059 1.00 -1.00 \ ATOM 230 C GLU H 387 33.228 30.706 4.034 1.00 -1.00 \ ATOM 231 O GLU H 387 33.707 29.672 4.512 1.00 -1.00 \ ATOM 232 CB GLU H 387 35.237 32.207 3.788 1.00 -1.00 \ ATOM 233 CG GLU H 387 36.290 32.843 2.866 1.00 -1.00 \ ATOM 234 CD GLU H 387 36.130 34.356 2.690 1.00 -1.00 \ ATOM 235 OE1 GLU H 387 35.584 35.016 3.605 1.00 -1.00 \ ATOM 236 OE2 GLU H 387 36.574 34.892 1.641 1.00 -1.00 \ ATOM 237 N CYS H 388 31.996 31.123 4.320 1.00 0.96 \ ATOM 238 CA CYS H 388 31.192 30.459 5.347 1.00 0.96 \ ATOM 239 C CYS H 388 29.865 29.856 4.869 1.00 0.96 \ ATOM 240 O CYS H 388 29.415 28.853 5.426 1.00 0.96 \ ATOM 241 CB CYS H 388 30.965 31.404 6.529 1.00 0.96 \ ATOM 242 SG CYS H 388 32.501 31.890 7.353 1.00 0.96 \ """, "e2iybH2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2iybH2_csv", state=0, origin=1) cmd.zoom("e2iybH2_csv", animate=-1)