cmd.read_pdbstr("""\ ATOM 1 N MET A 1 0.000 0.000 0.000 1.00 0.81 \ ATOM 2 CA MET A 1 1.453 0.000 0.000 1.00 0.81 \ ATOM 3 C MET A 1 2.001 0.877 1.128 1.00 0.81 \ ATOM 4 O MET A 1 1.265 1.664 1.720 1.00 0.81 \ ATOM 5 CB MET A 1 1.964 0.520 -1.345 1.00 0.81 \ ATOM 6 CG MET A 1 2.939 -0.472 -1.982 1.00 0.81 \ ATOM 7 SD MET A 1 4.525 0.307 -2.233 1.00 0.81 \ ATOM 8 CE MET A 1 5.407 -1.031 -3.019 1.00 0.81 \ ATOM 9 H MET A 1 -0.338 0.478 0.828 1.00 0.81 \ ATOM 10 HA MET A 1 1.746 -1.038 0.162 1.00 0.81 \ ATOM 11 N ASP A 2 3.289 0.710 1.391 1.00 0.81 \ ATOM 12 CA ASP A 2 3.945 1.476 2.437 1.00 0.81 \ ATOM 13 C ASP A 2 4.853 2.530 1.799 1.00 0.81 \ ATOM 14 O ASP A 2 5.219 2.413 0.631 1.00 0.81 \ ATOM 15 CB ASP A 2 4.812 0.576 3.318 1.00 0.81 \ ATOM 16 CG ASP A 2 4.967 1.043 4.766 1.00 0.81 \ ATOM 17 OD1 ASP A 2 3.864 1.143 5.428 1.00 0.81 \ ATOM 18 OD2 ASP A 2 6.084 1.299 5.239 1.00 0.81 \ ATOM 19 H ASP A 2 3.881 0.067 0.904 1.00 0.81 \ ATOM 20 HA ASP A 2 3.135 1.919 3.017 1.00 0.81 \ ATOM 21 N PRO A 3 5.198 3.561 2.615 1.00 0.81 \ ATOM 22 CA PRO A 3 6.056 4.634 2.143 1.00 0.81 \ ATOM 23 C PRO A 3 7.512 4.173 2.052 1.00 0.81 \ ATOM 24 O PRO A 3 7.933 3.631 1.031 1.00 0.81 \ ATOM 25 CB PRO A 3 5.853 5.766 3.136 1.00 0.81 \ ATOM 26 CG PRO A 3 5.253 5.128 4.378 1.00 0.81 \ ATOM 27 CD PRO A 3 4.783 3.732 4.005 1.00 0.81 \ ATOM 28 HA PRO A 3 5.767 4.930 1.135 1.00 0.81 \ ATOM 29 N ASN A 4 8.242 4.404 3.134 1.00 -0.22 \ ATOM 30 CA ASN A 4 9.642 4.019 3.189 1.00 -0.22 \ ATOM 31 C ASN A 4 9.811 2.638 2.553 1.00 -0.22 \ ATOM 32 O ASN A 4 10.462 2.503 1.517 1.00 -0.22 \ ATOM 33 CB ASN A 4 10.134 3.937 4.635 1.00 -0.22 \ ATOM 34 CG ASN A 4 10.416 5.332 5.198 1.00 -0.22 \ ATOM 35 OD1 ASN A 4 11.031 6.173 4.563 1.00 -0.22 \ ATOM 36 ND2 ASN A 4 9.934 5.528 6.422 1.00 -0.22 \ ATOM 37 H ASN A 4 7.892 4.846 3.960 1.00 -0.22 \ ATOM 38 HA ASN A 4 10.175 4.798 2.643 1.00 -0.22 \ ATOM 39 N CYS A 5 9.215 1.647 3.199 1.00 0.81 \ ATOM 40 CA CYS A 5 9.292 0.281 2.709 1.00 0.81 \ ATOM 41 C CYS A 5 8.299 0.127 1.556 1.00 0.81 \ ATOM 42 O CYS A 5 7.142 0.529 1.671 1.00 0.81 \ ATOM 43 CB CYS A 5 9.035 -0.735 3.824 1.00 0.81 \ ATOM 44 SG CYS A 5 8.459 -2.374 3.250 1.00 0.81 \ ATOM 45 H CYS A 5 8.688 1.765 4.040 1.00 0.81 \ ATOM 46 HA CYS A 5 10.314 0.130 2.362 1.00 0.81 \ ATOM 47 N SER A 6 8.786 -0.455 0.470 1.00 0.81 \ ATOM 48 CA SER A 6 7.955 -0.667 -0.703 1.00 0.81 \ ATOM 49 C SER A 6 8.037 -2.129 -1.145 1.00 0.81 \ ATOM 50 O SER A 6 8.110 -2.418 -2.339 1.00 0.81 \ ATOM 51 CB SER A 6 8.373 0.258 -1.848 1.00 0.81 \ ATOM 52 OG SER A 6 9.444 -0.288 -2.612 1.00 0.81 \ ATOM 53 H SER A 6 9.729 -0.779 0.385 1.00 0.81 \ ATOM 54 HA SER A 6 6.942 -0.419 -0.387 1.00 0.81 \ ATOM 55 N CYS A 7 8.024 -3.014 -0.159 1.00 0.81 \ ATOM 56 CA CYS A 7 8.095 -4.440 -0.431 1.00 0.81 \ ATOM 57 C CYS A 7 6.679 -4.949 -0.704 1.00 0.81 \ ATOM 58 O CYS A 7 5.729 -4.539 -0.038 1.00 0.81 \ ATOM 59 CB CYS A 7 8.766 -5.202 0.714 1.00 0.81 \ ATOM 60 SG CYS A 7 10.589 -5.059 0.767 1.00 0.81 \ ATOM 61 H CYS A 7 7.964 -2.772 0.809 1.00 0.81 \ ATOM 62 HA CYS A 7 8.726 -4.559 -1.313 1.00 0.81 \ ATOM 63 N ALA A 8 6.581 -5.836 -1.684 1.00 -0.97 \ ATOM 64 CA ALA A 8 5.296 -6.405 -2.052 1.00 -0.97 \ ATOM 65 C ALA A 8 4.841 -7.375 -0.960 1.00 -0.97 \ ATOM 66 O ALA A 8 5.538 -7.567 0.035 1.00 -0.97 \ ATOM 67 CB ALA A 8 5.410 -7.080 -3.420 1.00 -0.97 \ ATOM 68 H ALA A 8 7.358 -6.164 -2.220 1.00 -0.97 \ ATOM 69 HA ALA A 8 4.579 -5.588 -2.123 1.00 -0.97 \ ATOM 70 N THR A 9 3.673 -7.961 -1.182 1.00 -1.42 \ ATOM 71 CA THR A 9 3.117 -8.906 -0.229 1.00 -1.42 \ ATOM 72 C THR A 9 3.055 -10.307 -0.841 1.00 -1.42 \ ATOM 73 O THR A 9 2.514 -11.230 -0.234 1.00 -1.42 \ ATOM 74 CB THR A 9 1.752 -8.378 0.219 1.00 -1.42 \ ATOM 75 OG1 THR A 9 2.068 -7.313 1.112 1.00 -1.42 \ ATOM 76 CG2 THR A 9 0.993 -9.381 1.088 1.00 -1.42 \ ATOM 77 H THR A 9 3.112 -7.799 -1.994 1.00 -1.42 \ ATOM 78 HA THR A 9 3.785 -8.961 0.630 1.00 -1.42 \ ATOM 79 HB THR A 9 1.152 -8.073 -0.639 1.00 -1.42 \ ATOM 80 N ASP A 10 3.616 -10.421 -2.036 1.00 -0.22 \ ATOM 81 CA ASP A 10 3.632 -11.694 -2.737 1.00 -0.22 \ ATOM 82 C ASP A 10 4.755 -12.567 -2.174 1.00 -0.22 \ ATOM 83 O ASP A 10 4.642 -13.792 -2.152 1.00 -0.22 \ ATOM 84 CB ASP A 10 3.890 -11.496 -4.232 1.00 -0.22 \ ATOM 85 CG ASP A 10 4.909 -10.407 -4.574 1.00 -0.22 \ ATOM 86 OD1 ASP A 10 5.902 -10.214 -3.856 1.00 -0.22 \ ATOM 87 OD2 ASP A 10 4.647 -9.732 -5.641 1.00 -0.22 \ ATOM 88 H ASP A 10 4.054 -9.665 -2.523 1.00 -0.22 \ ATOM 89 HA ASP A 10 2.645 -12.125 -2.569 1.00 -0.22 \ ATOM 90 N GLY A 11 5.813 -11.903 -1.734 1.00 -1.41 \ ATOM 91 CA GLY A 11 6.956 -12.603 -1.173 1.00 -1.41 \ ATOM 92 C GLY A 11 8.134 -12.601 -2.149 1.00 -1.41 \ ATOM 93 O GLY A 11 9.173 -13.200 -1.876 1.00 -1.41 \ ATOM 94 H GLY A 11 5.897 -10.907 -1.755 1.00 -1.41 \ ATOM 95 N SER A 12 7.933 -11.919 -3.267 1.00 0.81 \ ATOM 96 CA SER A 12 8.965 -11.831 -4.286 1.00 0.81 \ ATOM 97 C SER A 12 9.922 -10.681 -3.962 1.00 0.81 \ ATOM 98 O SER A 12 10.802 -10.358 -4.760 1.00 0.81 \ ATOM 99 CB SER A 12 8.354 -11.637 -5.675 1.00 0.81 \ ATOM 100 OG SER A 12 6.930 -11.653 -5.638 1.00 0.81 \ ATOM 101 H SER A 12 7.085 -11.434 -3.482 1.00 0.81 \ ATOM 102 HA SER A 12 9.489 -12.786 -4.250 1.00 0.81 \ ATOM 103 N CYS A 13 9.719 -10.096 -2.791 1.00 0.81 \ ATOM 104 CA CYS A 13 10.552 -8.990 -2.353 1.00 0.81 \ ATOM 105 C CYS A 13 11.973 -9.515 -2.135 1.00 0.81 \ ATOM 106 O CYS A 13 12.937 -8.927 -2.622 1.00 0.81 \ ATOM 107 CB CYS A 13 9.992 -8.323 -1.095 1.00 0.81 \ ATOM 108 SG CYS A 13 10.294 -9.241 0.459 1.00 0.81 \ ATOM 109 H CYS A 13 9.001 -10.365 -2.149 1.00 0.81 \ ATOM 110 HA CYS A 13 10.532 -8.247 -3.150 1.00 0.81 \ ATOM 111 N SER A 14 12.056 -10.617 -1.404 1.00 -1.79 \ ATOM 112 CA SER A 14 13.343 -11.229 -1.117 1.00 -1.79 \ ATOM 113 C SER A 14 14.386 -10.146 -0.836 1.00 -1.79 \ ATOM 114 O SER A 14 15.514 -10.226 -1.319 1.00 -1.79 \ ATOM 115 CB SER A 14 13.800 -12.120 -2.274 1.00 -1.79 \ ATOM 116 OG SER A 14 13.842 -13.495 -1.904 1.00 -1.79 \ ATOM 117 H SER A 14 11.267 -11.090 -1.012 1.00 -1.79 \ ATOM 118 HA SER A 14 13.179 -11.841 -0.230 1.00 -1.79 \ ATOM 119 N CYS A 15 13.972 -9.157 -0.057 1.00 0.81 \ ATOM 120 CA CYS A 15 14.857 -8.059 0.293 1.00 0.81 \ ATOM 121 C CYS A 15 16.022 -8.623 1.109 1.00 0.81 \ ATOM 122 O CYS A 15 16.305 -9.819 1.050 1.00 0.81 \ ATOM 123 CB CYS A 15 14.115 -6.954 1.047 1.00 0.81 \ ATOM 124 SG CYS A 15 13.380 -7.471 2.641 1.00 0.81 \ ATOM 125 H CYS A 15 13.052 -9.100 0.332 1.00 0.81 \ ATOM 126 HA CYS A 15 15.211 -7.632 -0.644 1.00 0.81 \ ATOM 127 N ALA A 16 16.667 -7.735 1.851 1.00 -1.41 \ ATOM 128 CA ALA A 16 17.796 -8.129 2.677 1.00 -1.41 \ ATOM 129 C ALA A 16 19.012 -8.384 1.784 1.00 -1.41 \ ATOM 130 O ALA A 16 18.865 -8.734 0.614 1.00 -1.41 \ ATOM 131 CB ALA A 16 17.416 -9.356 3.509 1.00 -1.41 \ ATOM 132 H ALA A 16 16.431 -6.764 1.893 1.00 -1.41 \ ATOM 133 HA ALA A 16 18.017 -7.303 3.352 1.00 -1.41 \ ATOM 134 N GLY A 17 20.186 -8.197 2.370 1.00 -1.42 \ ATOM 135 CA GLY A 17 21.426 -8.402 1.642 1.00 -1.42 \ ATOM 136 C GLY A 17 21.632 -7.310 0.591 1.00 -1.42 \ ATOM 137 O GLY A 17 22.561 -7.383 -0.212 1.00 -1.42 \ ATOM 138 H GLY A 17 20.296 -7.912 3.322 1.00 -1.42 \ ATOM 139 N SER A 18 20.750 -6.321 0.630 1.00 0.81 \ ATOM 140 CA SER A 18 20.823 -5.215 -0.309 1.00 0.81 \ ATOM 141 C SER A 18 19.488 -4.470 -0.345 1.00 0.81 \ ATOM 142 O SER A 18 18.988 -4.135 -1.418 1.00 0.81 \ ATOM 143 CB SER A 18 21.196 -5.706 -1.709 1.00 0.81 \ ATOM 144 OG SER A 18 20.953 -4.714 -2.704 1.00 0.81 \ ATOM 145 H SER A 18 19.997 -6.269 1.287 1.00 0.81 \ ATOM 146 HA SER A 18 21.613 -4.567 0.070 1.00 0.81 \ ATOM 147 N CYS A 19 18.947 -4.232 0.841 1.00 0.81 \ ATOM 148 CA CYS A 19 17.679 -3.533 0.959 1.00 0.81 \ ATOM 149 C CYS A 19 17.968 -2.047 1.179 1.00 0.81 \ ATOM 150 O CYS A 19 18.881 -1.692 1.924 1.00 0.81 \ ATOM 151 CB CYS A 19 16.812 -4.117 2.076 1.00 0.81 \ ATOM 152 SG CYS A 19 15.029 -3.726 1.947 1.00 0.81 \ ATOM 153 H CYS A 19 19.360 -4.508 1.709 1.00 0.81 \ ATOM 154 HA CYS A 19 17.147 -3.688 0.020 1.00 0.81 \ ATOM 155 N LYS A 20 17.174 -1.217 0.518 1.00 -1.41 \ ATOM 156 CA LYS A 20 17.334 0.222 0.633 1.00 -1.41 \ ATOM 157 C LYS A 20 16.096 0.816 1.309 1.00 -1.41 \ ATOM 158 O LYS A 20 15.901 2.031 1.297 1.00 -1.41 \ ATOM 159 CB LYS A 20 17.642 0.838 -0.733 1.00 -1.41 \ ATOM 160 CG LYS A 20 17.629 2.366 -0.662 1.00 -1.41 \ ATOM 161 CD LYS A 20 18.861 2.891 0.077 1.00 -1.41 \ ATOM 162 CE LYS A 20 20.126 2.161 -0.377 1.00 -1.41 \ ATOM 163 NZ LYS A 20 20.736 2.851 -1.536 1.00 -1.41 \ ATOM 164 H LYS A 20 16.434 -1.514 -0.085 1.00 -1.41 \ ATOM 165 HA LYS A 20 18.198 0.406 1.272 1.00 -1.41 \ ATOM 166 N CYS A 21 15.293 -0.068 1.883 1.00 0.81 \ ATOM 167 CA CYS A 21 14.080 0.354 2.563 1.00 0.81 \ ATOM 168 C CYS A 21 14.478 1.091 3.843 1.00 0.81 \ ATOM 169 O CYS A 21 15.353 0.636 4.579 1.00 0.81 \ ATOM 170 CB CYS A 21 13.153 -0.829 2.850 1.00 0.81 \ ATOM 171 SG CYS A 21 12.169 -1.398 1.416 1.00 0.81 \ ATOM 172 H CYS A 21 15.460 -1.054 1.888 1.00 0.81 \ ATOM 173 HA CYS A 21 13.554 1.021 1.880 1.00 0.81 \ ATOM 174 N LYS A 22 13.818 2.217 4.069 1.00 0.81 \ ATOM 175 CA LYS A 22 14.092 3.021 5.248 1.00 0.81 \ ATOM 176 C LYS A 22 13.423 2.380 6.465 1.00 0.81 \ ATOM 177 O LYS A 22 14.075 2.132 7.478 1.00 0.81 \ ATOM 178 CB LYS A 22 13.677 4.475 5.013 1.00 0.81 \ ATOM 179 CG LYS A 22 14.584 5.144 3.978 1.00 0.81 \ ATOM 180 CD LYS A 22 13.839 6.251 3.229 1.00 0.81 \ ATOM 181 CE LYS A 22 14.787 7.027 2.313 1.00 0.81 \ ATOM 182 NZ LYS A 22 14.022 7.907 1.401 1.00 0.81 \ ATOM 183 H LYS A 22 13.108 2.580 3.466 1.00 0.81 \ ATOM 184 HA LYS A 22 15.171 3.016 5.404 1.00 0.81 \ ATOM 185 N GLN A 23 12.129 2.129 6.325 1.00 -1.41 \ ATOM 186 CA GLN A 23 11.365 1.521 7.401 1.00 -1.41 \ ATOM 187 C GLN A 23 10.811 0.165 6.958 1.00 -1.41 \ ATOM 188 O GLN A 23 9.598 -0.019 6.880 1.00 -1.41 \ ATOM 189 CB GLN A 23 10.239 2.447 7.865 1.00 -1.41 \ ATOM 190 CG GLN A 23 9.124 2.522 6.820 1.00 -1.41 \ ATOM 191 CD GLN A 23 7.943 3.347 7.335 1.00 -1.41 \ ATOM 192 OE1 GLN A 23 7.372 3.076 8.378 1.00 -1.41 \ ATOM 193 NE2 GLN A 23 7.611 4.366 6.549 1.00 -1.41 \ ATOM 194 H GLN A 23 11.606 2.333 5.498 1.00 -1.41 \ ATOM 195 HA GLN A 23 12.073 1.383 8.218 1.00 -1.41 \ ATOM 196 N CYS A 24 11.728 -0.750 6.680 1.00 -0.89 \ ATOM 197 CA CYS A 24 11.348 -2.084 6.247 1.00 -0.89 \ ATOM 198 C CYS A 24 11.178 -2.962 7.489 1.00 -0.89 \ ATOM 199 O CYS A 24 11.929 -2.830 8.454 1.00 -0.89 \ ATOM 200 CB CYS A 24 12.364 -2.672 5.267 1.00 -0.89 \ ATOM 201 SG CYS A 24 11.878 -4.273 4.526 1.00 -0.89 \ ATOM 202 H CYS A 24 12.714 -0.593 6.747 1.00 -0.89 \ ATOM 203 HA CYS A 24 10.403 -1.982 5.713 1.00 -0.89 \ ATOM 204 N LYS A 25 10.185 -3.837 7.424 1.00 -0.93 \ ATOM 205 CA LYS A 25 9.907 -4.736 8.531 1.00 -0.93 \ ATOM 206 C LYS A 25 9.337 -6.048 7.986 1.00 -0.93 \ ATOM 207 O LYS A 25 8.179 -6.378 8.240 1.00 -0.93 \ ATOM 208 CB LYS A 25 9.005 -4.055 9.562 1.00 -0.93 \ ATOM 209 CG LYS A 25 9.726 -2.883 10.231 1.00 -0.93 \ ATOM 210 CD LYS A 25 9.173 -2.628 11.635 1.00 -0.93 \ ATOM 211 CE LYS A 25 7.729 -2.127 11.573 1.00 -0.93 \ ATOM 212 NZ LYS A 25 6.789 -3.266 11.464 1.00 -0.93 \ ATOM 213 H LYS A 25 9.579 -3.938 6.635 1.00 -0.93 \ ATOM 214 HA LYS A 25 10.855 -4.951 9.024 1.00 -0.93 \ ATOM 215 N CYS A 26 10.175 -6.759 7.248 1.00 -0.22 \ ATOM 216 CA CYS A 26 9.769 -8.027 6.665 1.00 -0.22 \ ATOM 217 C CYS A 26 10.251 -9.153 7.582 1.00 -0.22 \ ATOM 218 O CYS A 26 10.902 -10.092 7.127 1.00 -0.22 \ ATOM 219 CB CYS A 26 10.295 -8.188 5.238 1.00 -0.22 \ ATOM 220 SG CYS A 26 9.356 -7.268 3.965 1.00 -0.22 \ ATOM 221 H CYS A 26 11.115 -6.483 7.046 1.00 -0.22 \ ATOM 222 HA CYS A 26 8.681 -8.012 6.610 1.00 -0.22 \ ATOM 223 N THR A 27 9.912 -9.022 8.856 1.00 0.81 \ ATOM 224 CA THR A 27 10.302 -10.017 9.840 1.00 0.81 \ ATOM 225 C THR A 27 11.826 -10.080 9.960 1.00 0.81 \ ATOM 226 O THR A 27 12.400 -9.556 10.913 1.00 0.81 \ ATOM 227 CB THR A 27 9.668 -11.351 9.441 1.00 0.81 \ ATOM 228 OG1 THR A 27 8.329 -11.009 9.096 1.00 0.81 \ ATOM 229 CG2 THR A 27 9.516 -12.305 10.628 1.00 0.81 \ ATOM 230 H THR A 27 9.383 -8.255 9.218 1.00 0.81 \ ATOM 231 HA THR A 27 9.918 -9.708 10.812 1.00 0.81 \ ATOM 232 HB THR A 27 10.228 -11.821 8.633 1.00 0.81 \ ATOM 233 N SER A 28 12.439 -10.726 8.978 1.00 0.81 \ ATOM 234 CA SER A 28 13.885 -10.865 8.962 1.00 0.81 \ ATOM 235 C SER A 28 14.542 -9.484 8.893 1.00 0.81 \ ATOM 236 O SER A 28 15.036 -8.978 9.899 1.00 0.81 \ ATOM 237 CB SER A 28 14.342 -11.729 7.785 1.00 0.81 \ ATOM 238 OG SER A 28 14.119 -13.116 8.023 1.00 0.81 \ ATOM 239 H SER A 28 11.965 -11.149 8.206 1.00 0.81 \ ATOM 240 HA SER A 28 14.138 -11.363 9.897 1.00 0.81 \ ATOM 241 N CYS A 29 14.527 -8.916 7.697 1.00 0.81 \ ATOM 242 CA CYS A 29 15.115 -7.604 7.484 1.00 0.81 \ ATOM 243 C CYS A 29 14.196 -6.557 8.117 1.00 0.81 \ ATOM 244 O CYS A 29 13.620 -5.727 7.417 1.00 0.81 \ ATOM 245 CB CYS A 29 15.357 -7.327 5.999 1.00 0.81 \ ATOM 246 SG CYS A 29 15.738 -5.583 5.596 1.00 0.81 \ ATOM 247 H CYS A 29 14.123 -9.335 6.883 1.00 0.81 \ ATOM 248 HA CYS A 29 16.087 -7.614 7.976 1.00 0.81 \ ATOM 249 N LYS A 30 14.088 -6.631 9.436 1.00 0.81 \ ATOM 250 CA LYS A 30 13.250 -5.700 10.171 1.00 0.81 \ ATOM 251 C LYS A 30 14.092 -4.992 11.235 1.00 0.81 \ ATOM 252 O LYS A 30 14.850 -4.079 10.843 1.00 0.81 \ ATOM 253 CB LYS A 30 12.021 -6.417 10.736 1.00 0.81 \ ATOM 254 CG LYS A 30 11.199 -5.479 11.622 1.00 0.81 \ ATOM 255 CD LYS A 30 11.092 -6.024 13.048 1.00 0.81 \ ATOM 256 CE LYS A 30 9.655 -5.932 13.564 1.00 0.81 \ ATOM 257 NZ LYS A 30 9.638 -5.471 14.970 1.00 0.81 \ ATOM 258 OXT LYS A 30 13.958 -5.381 12.415 1.00 0.81 \ ATOM 259 H LYS A 30 14.560 -7.310 9.998 1.00 0.81 \ ATOM 260 HA LYS A 30 12.890 -4.954 9.463 1.00 0.81 \ """, "e2mrtA1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2mrtA1_csv", state=0, origin=1) cmd.zoom("e2mrtA1_csv", animate=-1)