cmd.read_pdbstr("""\ ATOM 1 N PHE F 1 45.060 20.121 3.538 1.00 -1.00 \ ATOM 2 CA PHE F 1 44.109 19.617 4.576 1.00 -1.00 \ ATOM 3 C PHE F 1 42.645 19.868 4.181 1.00 -1.00 \ ATOM 4 O PHE F 1 42.226 21.027 4.024 1.00 -1.00 \ ATOM 5 CB PHE F 1 44.354 20.337 5.889 1.00 -1.00 \ ATOM 6 CG PHE F 1 45.781 20.288 6.364 1.00 -1.00 \ ATOM 7 CD1 PHE F 1 46.369 19.089 6.823 1.00 -1.00 \ ATOM 8 CD2 PHE F 1 46.579 21.423 6.367 1.00 -1.00 \ ATOM 9 CE1 PHE F 1 47.674 19.066 7.266 1.00 -1.00 \ ATOM 10 CE2 PHE F 1 47.874 21.408 6.812 1.00 -1.00 \ ATOM 11 CZ PHE F 1 48.454 20.218 7.245 1.00 -1.00 \ ATOM 12 N VAL F 2 41.836 18.808 4.075 1.00 -1.00 \ ATOM 13 CA VAL F 2 40.429 18.931 3.693 1.00 -1.00 \ ATOM 14 C VAL F 2 39.653 19.621 4.799 1.00 -1.00 \ ATOM 15 O VAL F 2 38.806 20.460 4.490 1.00 -1.00 \ ATOM 16 CB VAL F 2 39.828 17.575 3.347 1.00 -1.00 \ ATOM 17 CG1 VAL F 2 38.311 17.645 3.222 1.00 -1.00 \ ATOM 18 CG2 VAL F 2 40.362 17.136 2.027 1.00 -1.00 \ ATOM 19 N ASN F 3 39.989 19.378 6.080 1.00 -0.47 \ ATOM 20 CA ASN F 3 39.255 20.049 7.144 1.00 -0.47 \ ATOM 21 C ASN F 3 39.369 21.563 7.049 1.00 -0.47 \ ATOM 22 O ASN F 3 38.362 22.248 7.134 1.00 -0.47 \ ATOM 23 CB ASN F 3 39.549 19.487 8.545 1.00 -0.47 \ ATOM 24 CG ASN F 3 40.985 19.666 9.025 1.00 -0.47 \ ATOM 25 OD1 ASN F 3 41.888 20.073 8.280 1.00 -0.47 \ ATOM 26 ND2 ASN F 3 41.175 19.365 10.298 1.00 -0.47 \ ATOM 27 N GLN F 4 40.568 22.073 6.794 1.00 0.23 \ ATOM 28 CA GLN F 4 40.769 23.513 6.679 1.00 0.23 \ ATOM 29 C GLN F 4 40.063 24.034 5.464 1.00 0.23 \ ATOM 30 O GLN F 4 39.479 25.097 5.498 1.00 0.23 \ ATOM 31 CB GLN F 4 42.260 23.877 6.583 1.00 0.23 \ ATOM 32 CG GLN F 4 42.482 25.382 6.327 1.00 0.23 \ ATOM 33 CD GLN F 4 43.906 25.753 5.957 1.00 0.23 \ ATOM 34 OE1 GLN F 4 44.859 25.253 6.541 1.00 0.23 \ ATOM 35 NE2 GLN F 4 44.055 26.655 4.994 1.00 0.23 \ ATOM 36 N HIS F 5 40.062 23.274 4.373 1.00 -0.04 \ ATOM 37 CA HIS F 5 39.424 23.669 3.157 1.00 -0.04 \ ATOM 38 C HIS F 5 37.922 23.850 3.420 1.00 -0.04 \ ATOM 39 O HIS F 5 37.308 24.851 3.009 1.00 -0.04 \ ATOM 40 CB HIS F 5 39.609 22.670 2.042 1.00 -0.04 \ ATOM 41 CG HIS F 5 38.994 23.143 0.773 1.00 -0.04 \ ATOM 42 ND1 HIS F 5 39.572 24.109 -0.015 1.00 -0.04 \ ATOM 43 CD2 HIS F 5 37.799 22.856 0.208 1.00 -0.04 \ ATOM 44 CE1 HIS F 5 38.774 24.367 -1.037 1.00 -0.04 \ ATOM 45 NE2 HIS F 5 37.691 23.620 -0.928 1.00 -0.04 \ ATOM 46 N LEU F 6 37.317 22.880 4.077 1.00 1.15 \ ATOM 47 CA LEU F 6 35.869 22.917 4.336 1.00 1.15 \ ATOM 48 C LEU F 6 35.530 24.069 5.307 1.00 1.15 \ ATOM 49 O LEU F 6 34.610 24.819 5.064 1.00 1.15 \ ATOM 50 CB LEU F 6 35.375 21.574 4.855 1.00 1.15 \ ATOM 51 CG LEU F 6 35.535 20.349 3.956 1.00 1.15 \ ATOM 52 CD1 LEU F 6 34.931 19.117 4.676 1.00 1.15 \ ATOM 53 CD2 LEU F 6 35.014 20.512 2.558 1.00 1.15 \ ATOM 54 N CYS F 7 36.356 24.257 6.335 1.00 1.70 \ ATOM 55 CA CYS F 7 36.149 25.336 7.293 1.00 1.70 \ ATOM 56 C CYS F 7 36.194 26.683 6.561 1.00 1.70 \ ATOM 57 O CYS F 7 35.326 27.539 6.772 1.00 1.70 \ ATOM 58 CB CYS F 7 37.188 25.270 8.379 1.00 1.70 \ ATOM 59 SG CYS F 7 37.013 26.627 9.575 1.00 1.70 \ ATOM 60 N GLY F 8 37.217 26.862 5.734 1.00 0.71 \ ATOM 61 CA GLY F 8 37.404 28.092 4.981 1.00 0.71 \ ATOM 62 C GLY F 8 36.219 28.445 4.119 1.00 0.71 \ ATOM 63 O GLY F 8 35.847 29.590 3.950 1.00 0.71 \ ATOM 64 N SER F 9 35.661 27.447 3.459 1.00 -0.48 \ ATOM 65 CA SER F 9 34.509 27.643 2.618 1.00 -0.48 \ ATOM 66 C SER F 9 33.368 28.310 3.399 1.00 -0.48 \ ATOM 67 O SER F 9 32.712 29.229 2.951 1.00 -0.48 \ ATOM 68 CB SER F 9 34.044 26.303 2.066 1.00 -0.48 \ ATOM 69 OG SER F 9 32.827 26.451 1.358 1.00 -0.48 \ ATOM 70 N HIS F 10 33.094 27.808 4.569 1.00 -0.23 \ ATOM 71 CA HIS F 10 32.103 28.408 5.446 1.00 -0.23 \ ATOM 72 C HIS F 10 32.514 29.747 6.011 1.00 -0.23 \ ATOM 73 O HIS F 10 31.691 30.661 6.108 1.00 -0.23 \ ATOM 74 CB HIS F 10 31.700 27.435 6.565 1.00 -0.23 \ ATOM 75 CG HIS F 10 30.998 26.206 6.066 1.00 -0.23 \ ATOM 76 ND1 HIS F 10 29.623 26.127 5.986 1.00 -0.23 \ ATOM 77 CD2 HIS F 10 31.464 25.029 5.563 1.00 -0.23 \ ATOM 78 CE1 HIS F 10 29.281 24.933 5.504 1.00 -0.23 \ ATOM 79 NE2 HIS F 10 30.364 24.239 5.259 1.00 -0.23 \ ATOM 80 N LEU F 11 33.787 29.905 6.328 1.00 1.70 \ ATOM 81 CA LEU F 11 34.231 31.196 6.765 1.00 1.70 \ ATOM 82 C LEU F 11 33.984 32.252 5.690 1.00 1.70 \ ATOM 83 O LEU F 11 33.585 33.354 6.031 1.00 1.70 \ ATOM 84 CB LEU F 11 35.729 31.140 7.117 1.00 1.70 \ ATOM 85 CG LEU F 11 36.069 30.472 8.429 1.00 1.70 \ ATOM 86 CD1 LEU F 11 37.573 30.352 8.470 1.00 1.70 \ ATOM 87 CD2 LEU F 11 35.584 31.234 9.636 1.00 1.70 \ ATOM 88 N VAL F 12 34.340 31.982 4.456 1.00 0.71 \ ATOM 89 CA VAL F 12 34.166 33.014 3.384 1.00 0.71 \ ATOM 90 C VAL F 12 32.689 33.387 3.228 1.00 0.71 \ ATOM 91 O VAL F 12 32.336 34.527 2.980 1.00 0.71 \ ATOM 92 CB VAL F 12 34.746 32.464 2.050 1.00 0.71 \ ATOM 93 CG1 VAL F 12 34.174 33.177 0.866 1.00 0.71 \ ATOM 94 CG2 VAL F 12 36.248 32.544 2.131 1.00 0.71 \ ATOM 95 N GLU F 13 31.823 32.387 3.345 1.00 0.66 \ ATOM 96 CA GLU F 13 30.413 32.678 3.280 1.00 0.66 \ ATOM 97 C GLU F 13 29.984 33.644 4.387 1.00 0.66 \ ATOM 98 O GLU F 13 29.257 34.589 4.165 1.00 0.66 \ ATOM 99 CB GLU F 13 29.611 31.374 3.305 1.00 0.66 \ ATOM 100 CG GLU F 13 28.123 31.569 3.194 1.00 0.66 \ ATOM 101 CD GLU F 13 27.306 30.283 2.983 1.00 0.66 \ ATOM 102 OE1 GLU F 13 27.658 29.216 3.549 1.00 0.66 \ ATOM 103 OE2 GLU F 13 26.275 30.356 2.260 1.00 0.66 \ ATOM 104 N ALA F 14 30.457 33.355 5.592 1.00 -0.02 \ ATOM 105 CA ALA F 14 30.123 34.143 6.768 1.00 -0.02 \ ATOM 106 C ALA F 14 30.652 35.571 6.597 1.00 -0.02 \ ATOM 107 O ALA F 14 29.996 36.554 6.915 1.00 -0.02 \ ATOM 108 CB ALA F 14 30.703 33.471 8.017 1.00 -0.02 \ ATOM 109 N LEU F 15 31.873 35.705 6.106 1.00 1.70 \ ATOM 110 CA LEU F 15 32.468 36.989 5.881 1.00 1.70 \ ATOM 111 C LEU F 15 31.665 37.771 4.835 1.00 1.70 \ ATOM 112 O LEU F 15 31.394 38.934 4.954 1.00 1.70 \ ATOM 113 CB LEU F 15 33.928 36.888 5.428 1.00 1.70 \ ATOM 114 CG LEU F 15 34.930 36.438 6.506 1.00 1.70 \ ATOM 115 CD1 LEU F 15 36.251 36.189 5.852 1.00 1.70 \ ATOM 116 CD2 LEU F 15 34.999 37.442 7.660 1.00 1.70 \ ATOM 117 N TYR F 16 31.274 37.069 3.791 1.00 -0.22 \ ATOM 118 CA TYR F 16 30.494 37.732 2.745 1.00 -0.22 \ ATOM 119 C TYR F 16 29.210 38.346 3.326 1.00 -0.22 \ ATOM 120 O TYR F 16 28.824 39.481 3.014 1.00 -0.22 \ ATOM 121 CB TYR F 16 30.172 36.711 1.662 1.00 -0.22 \ ATOM 122 CG TYR F 16 29.297 37.255 0.579 1.00 -0.22 \ ATOM 123 CD1 TYR F 16 29.810 38.129 -0.360 1.00 -0.22 \ ATOM 124 CD2 TYR F 16 27.931 36.957 0.523 1.00 -0.22 \ ATOM 125 CE1 TYR F 16 29.025 38.636 -1.366 1.00 -0.22 \ ATOM 126 CE2 TYR F 16 27.151 37.433 -0.473 1.00 -0.22 \ ATOM 127 CZ TYR F 16 27.673 38.331 -1.393 1.00 -0.22 \ ATOM 128 OH TYR F 16 26.900 38.826 -2.404 1.00 -0.22 \ ATOM 129 N LEU F 17 28.569 37.564 4.186 1.00 -0.23 \ ATOM 130 CA LEU F 17 27.341 37.982 4.845 1.00 -0.23 \ ATOM 131 C LEU F 17 27.575 39.127 5.822 1.00 -0.23 \ ATOM 132 O LEU F 17 26.872 40.117 5.787 1.00 -0.23 \ ATOM 133 CB LEU F 17 26.705 36.813 5.603 1.00 -0.23 \ ATOM 134 CG LEU F 17 25.445 37.188 6.404 1.00 -0.23 \ ATOM 135 CD1 LEU F 17 24.257 37.734 5.551 1.00 -0.23 \ ATOM 136 CD2 LEU F 17 24.986 35.990 7.243 1.00 -0.23 \ ATOM 137 N VAL F 18 28.568 39.016 6.695 1.00 0.26 \ ATOM 138 CA VAL F 18 28.725 40.028 7.736 1.00 0.26 \ ATOM 139 C VAL F 18 29.389 41.295 7.224 1.00 0.26 \ ATOM 140 O VAL F 18 29.089 42.386 7.730 1.00 0.26 \ ATOM 141 CB VAL F 18 29.469 39.498 8.965 1.00 0.26 \ ATOM 142 CG1 VAL F 18 30.907 39.199 8.617 1.00 0.26 \ ATOM 143 CG2 VAL F 18 29.384 40.544 10.058 1.00 0.26 \ ATOM 144 N CYS F 19 30.261 41.183 6.229 1.00 1.70 \ ATOM 145 CA CYS F 19 31.077 42.305 5.804 1.00 1.70 \ ATOM 146 C CYS F 19 30.300 43.255 4.909 1.00 1.70 \ ATOM 147 O CYS F 19 30.618 44.443 4.865 1.00 1.70 \ ATOM 148 CB CYS F 19 32.381 41.839 5.163 1.00 1.70 \ ATOM 149 SG CYS F 19 33.417 41.046 6.378 1.00 1.70 \ ATOM 150 N GLY F 20 29.270 42.748 4.232 1.00 -0.16 \ ATOM 151 CA GLY F 20 28.348 43.636 3.531 1.00 -0.16 \ ATOM 152 C GLY F 20 29.031 44.314 2.356 1.00 -0.16 \ ATOM 153 O GLY F 20 29.767 43.674 1.611 1.00 -0.16 \ ATOM 154 N GLU F 21 28.760 45.602 2.173 1.00 0.19 \ ATOM 155 CA GLU F 21 29.414 46.396 1.134 1.00 0.19 \ ATOM 156 C GLU F 21 30.925 46.633 1.370 1.00 0.19 \ ATOM 157 O GLU F 21 31.669 46.827 0.405 1.00 0.19 \ ATOM 158 CB GLU F 21 28.664 47.725 0.924 1.00 0.19 \ ATOM 159 CG GLU F 21 28.493 48.589 2.176 1.00 0.19 \ ATOM 160 CD GLU F 21 27.355 49.601 2.035 1.00 0.19 \ ATOM 161 OE1 GLU F 21 26.212 49.170 1.739 1.00 0.19 \ ATOM 162 OE2 GLU F 21 27.602 50.817 2.229 1.00 0.19 \ ATOM 163 N ARG F 22 31.365 46.606 2.634 1.00 -0.61 \ ATOM 164 CA ARG F 22 32.801 46.703 2.999 1.00 -0.61 \ ATOM 165 C ARG F 22 33.686 45.668 2.297 1.00 -0.61 \ ATOM 166 O ARG F 22 34.843 45.937 1.961 1.00 -0.61 \ ATOM 167 CB ARG F 22 33.005 46.479 4.507 1.00 -0.61 \ ATOM 168 CG ARG F 22 32.793 47.668 5.429 1.00 -0.61 \ ATOM 169 CD ARG F 22 32.880 47.215 6.894 1.00 -0.61 \ ATOM 170 NE ARG F 22 31.775 46.305 7.220 1.00 -0.61 \ ATOM 171 CZ ARG F 22 31.573 45.733 8.408 1.00 -0.61 \ ATOM 172 NH1 ARG F 22 32.397 45.966 9.430 1.00 -0.61 \ ATOM 173 NH2 ARG F 22 30.525 44.932 8.569 1.00 -0.61 \ ATOM 174 N GLY F 23 33.166 44.452 2.148 1.00 1.70 \ ATOM 175 CA GLY F 23 33.950 43.355 1.578 1.00 1.70 \ ATOM 176 C GLY F 23 35.001 42.840 2.535 1.00 1.70 \ ATOM 177 O GLY F 23 35.038 43.226 3.696 1.00 1.70 \ ATOM 178 N PHE F 24 35.840 41.931 2.052 1.00 1.13 \ ATOM 179 CA PHE F 24 36.800 41.245 2.902 1.00 1.13 \ ATOM 180 C PHE F 24 37.964 40.722 2.076 1.00 1.13 \ ATOM 181 O PHE F 24 37.920 40.756 0.849 1.00 1.13 \ ATOM 182 CB PHE F 24 36.124 40.113 3.680 1.00 1.13 \ ATOM 183 CG PHE F 24 35.572 39.031 2.810 1.00 1.13 \ ATOM 184 CD1 PHE F 24 34.313 39.134 2.270 1.00 1.13 \ ATOM 185 CD2 PHE F 24 36.318 37.944 2.521 1.00 1.13 \ ATOM 186 CE1 PHE F 24 33.812 38.147 1.460 1.00 1.13 \ ATOM 187 CE2 PHE F 24 35.839 36.923 1.709 1.00 1.13 \ ATOM 188 CZ PHE F 24 34.572 37.031 1.171 1.00 1.13 \ ATOM 189 N PHE F 25 39.008 40.281 2.785 1.00 0.51 \ ATOM 190 CA PHE F 25 40.176 39.624 2.220 1.00 0.51 \ ATOM 191 C PHE F 25 40.101 38.252 2.824 1.00 0.51 \ ATOM 192 O PHE F 25 39.822 38.140 4.018 1.00 0.51 \ ATOM 193 CB PHE F 25 41.502 40.202 2.766 1.00 0.51 \ ATOM 194 CG PHE F 25 41.936 41.514 2.198 1.00 0.51 \ ATOM 195 CD1 PHE F 25 41.041 42.528 1.901 1.00 0.51 \ ATOM 196 CD2 PHE F 25 43.303 41.774 2.066 1.00 0.51 \ ATOM 197 CE1 PHE F 25 41.492 43.754 1.426 1.00 0.51 \ ATOM 198 CE2 PHE F 25 43.752 42.984 1.604 1.00 0.51 \ ATOM 199 CZ PHE F 25 42.845 43.984 1.286 1.00 0.51 \ ATOM 200 N TYR F 26 40.349 37.205 2.043 1.00 -0.25 \ ATOM 201 CA TYR F 26 40.583 35.881 2.618 1.00 -0.25 \ ATOM 202 C TYR F 26 41.950 35.465 2.121 1.00 -0.25 \ ATOM 203 O TYR F 26 42.164 35.282 0.926 1.00 -0.25 \ ATOM 204 CB TYR F 26 39.508 34.836 2.260 1.00 -0.25 \ ATOM 205 CG TYR F 26 39.706 33.534 2.989 1.00 -0.25 \ ATOM 206 CD1 TYR F 26 39.228 33.351 4.285 1.00 -0.25 \ ATOM 207 CD2 TYR F 26 40.370 32.485 2.385 1.00 -0.25 \ ATOM 208 CE1 TYR F 26 39.406 32.151 4.947 1.00 -0.25 \ ATOM 209 CE2 TYR F 26 40.569 31.318 3.033 1.00 -0.25 \ ATOM 210 CZ TYR F 26 40.090 31.146 4.311 1.00 -0.25 \ ATOM 211 OH TYR F 26 40.288 29.950 4.941 1.00 -0.25 \ ATOM 212 N THR F 27 42.881 35.375 3.060 1.00 -0.98 \ ATOM 213 CA THR F 27 44.321 35.328 2.773 1.00 -0.98 \ ATOM 214 C THR F 27 44.900 34.422 3.855 1.00 -0.98 \ ATOM 215 O THR F 27 45.842 34.807 4.556 1.00 -0.98 \ ATOM 216 CB THR F 27 44.979 36.748 2.845 1.00 -0.98 \ ATOM 217 OG1 THR F 27 44.747 37.332 4.134 1.00 -0.98 \ ATOM 218 CG2 THR F 27 44.426 37.694 1.767 1.00 -0.98 \ ATOM 219 N PRO F 28 44.377 33.184 3.939 1.00 -0.79 \ ATOM 220 CA PRO F 28 44.165 32.350 5.121 1.00 -0.79 \ ATOM 221 C PRO F 28 44.976 32.695 6.374 1.00 -0.79 \ ATOM 222 O PRO F 28 44.632 32.200 7.457 1.00 -0.79 \ ATOM 223 CB PRO F 28 44.539 30.952 4.618 1.00 -0.79 \ ATOM 224 CG PRO F 28 44.192 30.976 3.134 1.00 -0.79 \ ATOM 225 CD PRO F 28 44.063 32.432 2.709 1.00 -0.79 \ """, "e2omgF1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2omgF1_csv", state=0, origin=1) cmd.zoom("e2omgF1_csv", animate=-1)