cmd.read_pdbstr("""\ ATOM 1 N GLY F 9 36.908 88.688 167.476 1.00 -1.00 \ ATOM 2 CA GLY F 9 37.926 89.506 168.199 1.00 -1.00 \ ATOM 3 C GLY F 9 39.323 88.940 168.035 1.00 -1.00 \ ATOM 4 O GLY F 9 39.822 88.832 166.913 1.00 -1.00 \ ATOM 5 N THR F 10 39.956 88.581 169.152 1.00 -1.00 \ ATOM 6 CA THR F 10 41.304 88.009 169.134 1.00 -1.00 \ ATOM 7 C THR F 10 41.241 86.472 169.197 1.00 -1.00 \ ATOM 8 O THR F 10 42.182 85.808 169.646 1.00 -1.00 \ ATOM 9 CB THR F 10 42.162 88.548 170.314 1.00 -1.00 \ ATOM 10 OG1 THR F 10 42.141 89.982 170.300 1.00 -1.00 \ ATOM 11 CG2 THR F 10 43.614 88.083 170.190 1.00 -1.00 \ ATOM 12 N ARG F 11 40.118 85.921 168.739 1.00 0.82 \ ATOM 13 CA ARG F 11 39.906 84.475 168.705 1.00 0.82 \ ATOM 14 C ARG F 11 40.638 83.977 167.468 1.00 0.82 \ ATOM 15 O ARG F 11 41.483 83.073 167.536 1.00 0.82 \ ATOM 16 CB ARG F 11 38.410 84.187 168.587 1.00 0.82 \ ATOM 17 CG ARG F 11 37.573 85.112 169.445 1.00 0.82 \ ATOM 18 CD ARG F 11 36.204 84.549 169.719 1.00 0.82 \ ATOM 19 NE ARG F 11 35.677 85.097 170.962 1.00 0.82 \ ATOM 20 CZ ARG F 11 34.637 84.596 171.615 1.00 0.82 \ ATOM 21 NH1 ARG F 11 34.007 83.531 171.136 1.00 0.82 \ ATOM 22 NH2 ARG F 11 34.239 85.150 172.752 1.00 0.82 \ ATOM 23 N ARG F 12 40.297 84.600 166.340 1.00 0.82 \ ATOM 24 CA ARG F 12 40.896 84.290 165.051 1.00 0.82 \ ATOM 25 C ARG F 12 42.297 84.900 165.006 1.00 0.82 \ ATOM 26 O ARG F 12 43.244 84.259 164.546 1.00 0.82 \ ATOM 27 CB ARG F 12 40.005 84.831 163.920 1.00 0.82 \ ATOM 28 CG ARG F 12 38.635 84.151 163.870 1.00 0.82 \ ATOM 29 CD ARG F 12 38.800 82.646 163.703 1.00 0.82 \ ATOM 30 NE ARG F 12 37.570 81.868 163.904 1.00 0.82 \ ATOM 31 CZ ARG F 12 37.144 81.388 165.076 1.00 0.82 \ ATOM 32 NH1 ARG F 12 37.839 81.599 166.189 1.00 0.82 \ ATOM 33 NH2 ARG F 12 36.022 80.674 165.136 1.00 0.82 \ ATOM 34 N ASP F 13 42.427 86.124 165.515 1.00 0.82 \ ATOM 35 CA ASP F 13 43.710 86.814 165.541 1.00 0.82 \ ATOM 36 C ASP F 13 44.744 86.004 166.321 1.00 0.82 \ ATOM 37 O ASP F 13 45.918 85.997 165.965 1.00 0.82 \ ATOM 38 CB ASP F 13 43.552 88.201 166.156 1.00 0.82 \ ATOM 39 CG ASP F 13 44.509 89.210 165.557 1.00 0.82 \ ATOM 40 OD1 ASP F 13 44.457 89.414 164.322 1.00 0.82 \ ATOM 41 OD2 ASP F 13 45.310 89.796 166.319 1.00 0.82 \ ATOM 42 N PHE F 14 44.317 85.331 167.387 1.00 0.82 \ ATOM 43 CA PHE F 14 45.244 84.502 168.145 1.00 0.82 \ ATOM 44 C PHE F 14 45.799 83.463 167.191 1.00 0.82 \ ATOM 45 O PHE F 14 47.009 83.343 167.018 1.00 0.82 \ ATOM 46 CB PHE F 14 44.561 83.723 169.266 1.00 0.82 \ ATOM 47 CG PHE F 14 45.267 82.412 169.597 1.00 0.82 \ ATOM 48 CD1 PHE F 14 46.440 82.401 170.355 1.00 0.82 \ ATOM 49 CD2 PHE F 14 44.805 81.196 169.074 1.00 0.82 \ ATOM 50 CE1 PHE F 14 47.146 81.200 170.582 1.00 0.82 \ ATOM 51 CE2 PHE F 14 45.506 79.993 169.296 1.00 0.82 \ ATOM 52 CZ PHE F 14 46.677 79.998 170.050 1.00 0.82 \ ATOM 53 N LEU F 15 44.891 82.691 166.599 1.00 -0.76 \ ATOM 54 CA LEU F 15 45.259 81.639 165.659 1.00 -0.76 \ ATOM 55 C LEU F 15 46.269 82.174 164.643 1.00 -0.76 \ ATOM 56 O LEU F 15 47.354 81.617 164.490 1.00 -0.76 \ ATOM 57 CB LEU F 15 44.014 81.129 164.931 1.00 -0.76 \ ATOM 58 CG LEU F 15 44.174 79.871 164.077 1.00 -0.76 \ ATOM 59 CD1 LEU F 15 44.452 78.680 164.976 1.00 -0.76 \ ATOM 60 CD2 LEU F 15 42.914 79.643 163.267 1.00 -0.76 \ ATOM 61 N TYR F 16 45.906 83.261 163.961 1.00 0.82 \ ATOM 62 CA TYR F 16 46.769 83.889 162.957 1.00 0.82 \ ATOM 63 C TYR F 16 48.171 84.152 163.497 1.00 0.82 \ ATOM 64 O TYR F 16 49.155 83.995 162.783 1.00 0.82 \ ATOM 65 CB TYR F 16 46.156 85.212 162.470 1.00 0.82 \ ATOM 66 CG TYR F 16 44.955 85.064 161.547 1.00 0.82 \ ATOM 67 CD1 TYR F 16 44.039 84.021 161.719 1.00 0.82 \ ATOM 68 CD2 TYR F 16 44.701 85.998 160.536 1.00 0.82 \ ATOM 69 CE1 TYR F 16 42.895 83.913 160.912 1.00 0.82 \ ATOM 70 CE2 TYR F 16 43.561 85.901 159.722 1.00 0.82 \ ATOM 71 CZ TYR F 16 42.663 84.857 159.919 1.00 0.82 \ ATOM 72 OH TYR F 16 41.528 84.756 159.144 1.00 0.82 \ ATOM 73 N TYR F 17 48.268 84.546 164.759 1.00 -0.77 \ ATOM 74 CA TYR F 17 49.571 84.823 165.339 1.00 -0.77 \ ATOM 75 C TYR F 17 50.264 83.568 165.872 1.00 -0.77 \ ATOM 76 O TYR F 17 51.480 83.528 165.971 1.00 -0.77 \ ATOM 77 CB TYR F 17 49.429 85.922 166.410 1.00 -0.77 \ ATOM 78 CG TYR F 17 49.392 87.348 165.825 1.00 -0.77 \ ATOM 79 CD1 TYR F 17 48.893 87.598 164.527 1.00 -0.77 \ ATOM 80 CD2 TYR F 17 49.881 88.441 166.556 1.00 -0.77 \ ATOM 81 CE1 TYR F 17 48.895 88.899 163.978 1.00 -0.77 \ ATOM 82 CE2 TYR F 17 49.885 89.742 166.015 1.00 -0.77 \ ATOM 83 CZ TYR F 17 49.396 89.962 164.731 1.00 -0.77 \ ATOM 84 OH TYR F 17 49.436 91.238 164.210 1.00 -0.77 \ ATOM 85 N ALA F 18 49.499 82.534 166.194 1.00 0.82 \ ATOM 86 CA ALA F 18 50.100 81.291 166.675 1.00 0.82 \ ATOM 87 C ALA F 18 50.652 80.577 165.452 1.00 0.82 \ ATOM 88 O ALA F 18 51.656 79.869 165.521 1.00 0.82 \ ATOM 89 CB ALA F 18 49.052 80.417 167.363 1.00 0.82 \ ATOM 90 N THR F 19 49.974 80.781 164.330 1.00 0.82 \ ATOM 91 CA THR F 19 50.356 80.183 163.061 1.00 0.82 \ ATOM 92 C THR F 19 51.637 80.813 162.555 1.00 0.82 \ ATOM 93 O THR F 19 52.667 80.148 162.466 1.00 0.82 \ ATOM 94 CB THR F 19 49.230 80.359 162.005 1.00 0.82 \ ATOM 95 OG1 THR F 19 48.379 79.203 162.019 1.00 0.82 \ ATOM 96 CG2 THR F 19 49.806 80.561 160.605 1.00 0.82 \ ATOM 97 N ALA F 20 51.573 82.099 162.233 1.00 -0.76 \ ATOM 98 CA ALA F 20 52.741 82.805 161.733 1.00 -0.76 \ ATOM 99 C ALA F 20 53.935 82.482 162.615 1.00 -0.76 \ ATOM 100 O ALA F 20 55.073 82.454 162.152 1.00 -0.76 \ ATOM 101 CB ALA F 20 52.484 84.303 161.722 1.00 -0.76 \ ATOM 102 N GLY F 21 53.659 82.223 163.889 1.00 -0.77 \ ATOM 103 CA GLY F 21 54.715 81.899 164.830 1.00 -0.77 \ ATOM 104 C GLY F 21 55.416 80.611 164.468 1.00 -0.77 \ ATOM 105 O GLY F 21 56.628 80.587 164.284 1.00 -0.77 \ ATOM 106 N ALA F 22 54.648 79.534 164.367 1.00 -1.75 \ ATOM 107 CA ALA F 22 55.202 78.241 164.007 1.00 -1.75 \ ATOM 108 C ALA F 22 55.950 78.365 162.678 1.00 -1.75 \ ATOM 109 O ALA F 22 57.033 77.790 162.487 1.00 -1.75 \ ATOM 110 CB ALA F 22 54.087 77.220 163.890 1.00 -1.75 \ ATOM 111 N GLY F 23 55.355 79.121 161.759 1.00 0.82 \ ATOM 112 CA GLY F 23 55.964 79.326 160.461 1.00 0.82 \ ATOM 113 C GLY F 23 57.400 79.746 160.651 1.00 0.82 \ ATOM 114 O GLY F 23 58.329 79.009 160.316 1.00 0.82 \ ATOM 115 N ALA F 24 57.575 80.932 161.214 1.00 -0.81 \ ATOM 116 CA ALA F 24 58.901 81.471 161.467 1.00 -0.81 \ ATOM 117 C ALA F 24 59.840 80.418 162.045 1.00 -0.81 \ ATOM 118 O ALA F 24 60.948 80.223 161.535 1.00 -0.81 \ ATOM 119 CB ALA F 24 58.801 82.643 162.413 1.00 -0.81 \ ATOM 120 N VAL F 25 59.390 79.740 163.105 1.00 0.82 \ ATOM 121 CA VAL F 25 60.191 78.710 163.778 1.00 0.82 \ ATOM 122 C VAL F 25 60.802 77.760 162.780 1.00 0.82 \ ATOM 123 O VAL F 25 62.020 77.586 162.725 1.00 0.82 \ ATOM 124 CB VAL F 25 59.354 77.863 164.736 1.00 0.82 \ ATOM 125 CG1 VAL F 25 60.257 76.921 165.489 1.00 0.82 \ ATOM 126 CG2 VAL F 25 58.584 78.755 165.686 1.00 0.82 \ ATOM 127 N ALA F 26 59.928 77.132 162.006 1.00 -0.81 \ ATOM 128 CA ALA F 26 60.350 76.201 160.978 1.00 -0.81 \ ATOM 129 C ALA F 26 61.350 76.902 160.045 1.00 -0.81 \ ATOM 130 O ALA F 26 62.510 76.494 159.942 1.00 -0.81 \ ATOM 131 CB ALA F 26 59.133 75.724 160.200 1.00 -0.81 \ ATOM 132 N THR F 27 60.893 77.958 159.376 1.00 -0.80 \ ATOM 133 CA THR F 27 61.739 78.726 158.468 1.00 -0.80 \ ATOM 134 C THR F 27 63.185 78.772 158.948 1.00 -0.80 \ ATOM 135 O THR F 27 64.109 78.456 158.197 1.00 -0.80 \ ATOM 136 CB THR F 27 61.228 80.172 158.335 1.00 -0.80 \ ATOM 137 OG1 THR F 27 59.945 80.160 157.706 1.00 -0.80 \ ATOM 138 CG2 THR F 27 62.187 81.020 157.502 1.00 -0.80 \ ATOM 139 N GLY F 28 63.380 79.164 160.202 1.00 0.82 \ ATOM 140 CA GLY F 28 64.724 79.246 160.736 1.00 0.82 \ ATOM 141 C GLY F 28 65.382 77.894 160.850 1.00 0.82 \ ATOM 142 O GLY F 28 66.562 77.736 160.548 1.00 0.82 \ ATOM 143 N ALA F 29 64.611 76.915 161.300 1.00 -1.72 \ ATOM 144 CA ALA F 29 65.112 75.551 161.452 1.00 -1.72 \ ATOM 145 C ALA F 29 65.719 75.072 160.132 1.00 -1.72 \ ATOM 146 O ALA F 29 66.586 74.190 160.107 1.00 -1.72 \ ATOM 147 CB ALA F 29 63.982 74.623 161.884 1.00 -1.72 \ ATOM 148 N ALA F 30 65.247 75.668 159.037 1.00 0.82 \ ATOM 149 CA ALA F 30 65.727 75.365 157.683 1.00 0.82 \ ATOM 150 C ALA F 30 67.032 76.124 157.436 1.00 0.82 \ ATOM 151 O ALA F 30 68.085 75.552 157.129 1.00 0.82 \ ATOM 152 CB ALA F 30 64.688 75.806 156.673 1.00 0.82 \ ATOM 153 N VAL F 31 66.926 77.433 157.571 1.00 -1.72 \ ATOM 154 CA VAL F 31 68.048 78.311 157.401 1.00 -1.72 \ ATOM 155 C VAL F 31 69.302 77.869 158.182 1.00 -1.72 \ ATOM 156 O VAL F 31 70.395 77.757 157.620 1.00 -1.72 \ ATOM 157 CB VAL F 31 67.630 79.724 157.825 1.00 -1.72 \ ATOM 158 CG1 VAL F 31 68.809 80.679 157.756 1.00 -1.72 \ ATOM 159 CG2 VAL F 31 66.509 80.195 156.933 1.00 -1.72 \ ATOM 160 N TRP F 32 69.165 77.600 159.471 1.00 0.82 \ ATOM 161 CA TRP F 32 70.349 77.229 160.221 1.00 0.82 \ ATOM 162 C TRP F 32 71.287 76.222 159.527 1.00 0.82 \ ATOM 163 O TRP F 32 72.443 76.538 159.189 1.00 0.82 \ ATOM 164 CB TRP F 32 69.971 76.699 161.611 1.00 0.82 \ ATOM 165 CG TRP F 32 71.194 76.223 162.365 1.00 0.82 \ ATOM 166 CD1 TRP F 32 71.384 74.990 162.946 1.00 0.82 \ ATOM 167 CD2 TRP F 32 72.444 76.915 162.497 1.00 0.82 \ ATOM 168 NE1 TRP F 32 72.685 74.866 163.416 1.00 0.82 \ ATOM 169 CE2 TRP F 32 73.351 76.032 163.153 1.00 0.82 \ ATOM 170 CE3 TRP F 32 72.889 78.188 162.119 1.00 0.82 \ ATOM 171 CZ2 TRP F 32 74.661 76.385 163.430 1.00 0.82 \ ATOM 172 CZ3 TRP F 32 74.184 78.539 162.392 1.00 0.82 \ ATOM 173 CH2 TRP F 32 75.062 77.638 163.043 1.00 0.82 \ ATOM 174 N PRO F 33 70.791 74.996 159.292 1.00 0.82 \ ATOM 175 CA PRO F 33 71.580 73.935 158.653 1.00 0.82 \ ATOM 176 C PRO F 33 72.157 74.286 157.292 1.00 0.82 \ ATOM 177 O PRO F 33 73.228 73.784 156.910 1.00 0.82 \ ATOM 178 CB PRO F 33 70.608 72.771 158.623 1.00 0.82 \ ATOM 179 CG PRO F 33 69.295 73.446 158.493 1.00 0.82 \ ATOM 180 CD PRO F 33 69.386 74.575 159.444 1.00 0.82 \ ATOM 181 N LEU F 34 71.441 75.146 156.570 1.00 -1.00 \ ATOM 182 CA LEU F 34 71.905 75.609 155.269 1.00 -1.00 \ ATOM 183 C LEU F 34 73.158 76.428 155.504 1.00 -1.00 \ ATOM 184 O LEU F 34 74.022 76.532 154.631 1.00 -1.00 \ ATOM 185 CB LEU F 34 70.878 76.517 154.597 1.00 -1.00 \ ATOM 186 CG LEU F 34 69.673 75.839 153.974 1.00 -1.00 \ ATOM 187 CD1 LEU F 34 68.852 76.891 153.272 1.00 -1.00 \ ATOM 188 CD2 LEU F 34 70.121 74.769 152.985 1.00 -1.00 \ ATOM 189 N ILE F 35 73.221 77.026 156.693 1.00 -1.00 \ ATOM 190 CA ILE F 35 74.352 77.847 157.092 1.00 -1.00 \ ATOM 191 C ILE F 35 75.423 77.003 157.757 1.00 -1.00 \ ATOM 192 O ILE F 35 76.609 77.007 157.354 1.00 -1.00 \ ATOM 193 CB ILE F 35 73.936 78.929 158.098 1.00 -1.00 \ ATOM 194 CG1 ILE F 35 72.878 79.841 157.474 1.00 -1.00 \ ATOM 195 CG2 ILE F 35 75.159 79.748 158.519 1.00 -1.00 \ ATOM 196 CD1 ILE F 35 72.498 81.010 158.351 1.00 -1.00 \ ATOM 197 N ASN F 36 74.993 76.273 158.777 1.00 -1.00 \ ATOM 198 CA ASN F 36 75.928 75.462 159.512 1.00 -1.00 \ ATOM 199 C ASN F 36 76.760 74.500 158.658 1.00 -1.00 \ ATOM 200 O ASN F 36 77.919 74.216 158.992 1.00 -1.00 \ ATOM 201 CB ASN F 36 75.213 74.692 160.599 1.00 -1.00 \ ATOM 202 CG ASN F 36 76.183 73.973 161.492 1.00 -1.00 \ ATOM 203 OD1 ASN F 36 75.947 72.851 161.920 1.00 -1.00 \ ATOM 204 ND2 ASN F 36 77.296 74.617 161.774 1.00 -1.00 \ ATOM 205 N GLN F 37 76.173 73.998 157.567 1.00 -1.00 \ ATOM 206 CA GLN F 37 76.879 73.065 156.682 1.00 -1.00 \ ATOM 207 C GLN F 37 78.254 73.591 156.252 1.00 -1.00 \ ATOM 208 O GLN F 37 79.170 72.811 155.957 1.00 -1.00 \ ATOM 209 CB GLN F 37 76.036 72.778 155.445 1.00 -1.00 \ ATOM 210 CG GLN F 37 75.671 74.009 154.617 1.00 -1.00 \ ATOM 211 CD GLN F 37 76.754 74.389 153.598 1.00 -1.00 \ ATOM 212 OE1 GLN F 37 77.739 73.664 153.418 1.00 -1.00 \ ATOM 213 NE2 GLN F 37 76.564 75.521 152.922 1.00 -1.00 \ ATOM 214 N MET F 38 78.397 74.914 156.244 1.00 -1.00 \ ATOM 215 CA MET F 38 79.640 75.511 155.837 1.00 -1.00 \ ATOM 216 C MET F 38 80.691 75.460 156.885 1.00 -1.00 \ ATOM 217 O MET F 38 81.863 75.583 156.578 1.00 -1.00 \ ATOM 218 CB MET F 38 79.415 76.934 155.395 1.00 -1.00 \ ATOM 219 CG MET F 38 79.052 77.008 153.934 1.00 -1.00 \ ATOM 220 SD MET F 38 78.758 78.693 153.390 1.00 -1.00 \ ATOM 221 CE MET F 38 80.410 79.209 152.899 1.00 -1.00 \ ATOM 222 N ASN F 39 80.286 75.267 158.131 1.00 -1.00 \ ATOM 223 CA ASN F 39 81.262 75.192 159.217 1.00 -1.00 \ ATOM 224 C ASN F 39 82.126 73.979 159.052 1.00 -1.00 \ ATOM 225 O ASN F 39 81.815 73.070 158.269 1.00 -1.00 \ ATOM 226 CB ASN F 39 80.580 75.171 160.577 1.00 -1.00 \ ATOM 227 CG ASN F 39 80.038 76.540 160.958 1.00 -1.00 \ ATOM 228 OD1 ASN F 39 78.975 76.655 161.580 1.00 -1.00 \ ATOM 229 ND2 ASN F 39 80.773 77.595 160.581 1.00 -1.00 \ ATOM 230 N PRO F 40 83.241 73.950 159.772 1.00 -1.00 \ ATOM 231 CA PRO F 40 84.158 72.821 159.679 1.00 -1.00 \ ATOM 232 C PRO F 40 83.568 71.413 159.809 1.00 -1.00 \ ATOM 233 O PRO F 40 82.895 71.058 160.778 1.00 -1.00 \ ATOM 234 CB PRO F 40 85.197 73.166 160.732 1.00 -1.00 \ ATOM 235 CG PRO F 40 85.300 74.669 160.559 1.00 -1.00 \ ATOM 236 CD PRO F 40 83.844 75.056 160.531 1.00 -1.00 \ ATOM 237 N SER F 41 83.832 70.632 158.773 1.00 -1.00 \ ATOM 238 CA SER F 41 83.393 69.255 158.669 1.00 -1.00 \ ATOM 239 C SER F 41 84.154 68.438 159.682 1.00 -1.00 \ ATOM 240 O SER F 41 85.255 68.801 160.083 1.00 -1.00 \ ATOM 241 CB SER F 41 83.676 68.732 157.252 1.00 -1.00 \ ATOM 242 OG SER F 41 84.744 69.445 156.610 1.00 -1.00 \ ATOM 243 N ALA F 42 83.575 67.316 160.072 1.00 -1.00 \ ATOM 244 CA ALA F 42 84.187 66.452 161.071 1.00 -1.00 \ ATOM 245 C ALA F 42 85.596 65.970 160.760 1.00 -1.00 \ ATOM 246 O ALA F 42 86.286 65.470 161.646 1.00 -1.00 \ ATOM 247 CB ALA F 42 83.283 65.257 161.338 1.00 -1.00 \ ATOM 248 N ASP F 43 86.039 66.132 159.526 1.00 -1.00 \ ATOM 249 CA ASP F 43 87.363 65.660 159.173 1.00 -1.00 \ ATOM 250 C ASP F 43 88.414 66.712 159.431 1.00 -1.00 \ ATOM 251 O ASP F 43 89.574 66.382 159.727 1.00 -1.00 \ ATOM 252 CB ASP F 43 87.393 65.281 157.704 1.00 -1.00 \ ATOM 253 CG ASP F 43 87.020 66.442 156.808 1.00 -1.00 \ ATOM 254 OD1 ASP F 43 85.948 67.044 157.061 1.00 -1.00 \ ATOM 255 OD2 ASP F 43 87.794 66.752 155.863 1.00 -1.00 \ """, "e2qjkF2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2qjkF2_csv", state=0, origin=1) cmd.zoom("e2qjkF2_csv", animate=-1)