cmd.read_pdbstr("""\ ATOM 1 N GLY C 9 26.586 106.709 51.732 1.00 -1.00 \ ATOM 2 CA GLY C 9 27.637 105.725 51.369 1.00 -1.00 \ ATOM 3 C GLY C 9 27.101 104.317 51.200 1.00 -1.00 \ ATOM 4 O GLY C 9 26.416 104.017 50.220 1.00 -1.00 \ ATOM 5 N THR C 10 27.404 103.451 52.162 1.00 -1.00 \ ATOM 6 CA THR C 10 26.959 102.066 52.098 1.00 -1.00 \ ATOM 7 C THR C 10 25.619 101.844 52.805 1.00 -1.00 \ ATOM 8 O THR C 10 25.252 100.709 53.113 1.00 -1.00 \ ATOM 9 CB THR C 10 28.030 101.114 52.692 1.00 -1.00 \ ATOM 10 OG1 THR C 10 27.804 99.782 52.213 1.00 -1.00 \ ATOM 11 CG2 THR C 10 27.969 101.114 54.211 1.00 -1.00 \ ATOM 12 N ARG C 11 24.896 102.931 53.063 1.00 0.82 \ ATOM 13 CA ARG C 11 23.585 102.844 53.704 1.00 0.82 \ ATOM 14 C ARG C 11 22.584 102.513 52.606 1.00 0.82 \ ATOM 15 O ARG C 11 21.536 101.914 52.852 1.00 0.82 \ ATOM 16 CB ARG C 11 23.197 104.181 54.349 1.00 0.82 \ ATOM 17 CG ARG C 11 21.751 104.218 54.849 1.00 0.82 \ ATOM 18 CD ARG C 11 21.154 105.627 54.852 1.00 0.82 \ ATOM 19 NE ARG C 11 21.298 106.320 56.131 1.00 0.82 \ ATOM 20 CZ ARG C 11 22.440 106.813 56.601 1.00 0.82 \ ATOM 21 NH1 ARG C 11 23.557 106.694 55.897 1.00 0.82 \ ATOM 22 NH2 ARG C 11 22.462 107.433 57.774 1.00 0.82 \ ATOM 23 N ARG C 12 22.928 102.924 51.390 1.00 0.82 \ ATOM 24 CA ARG C 12 22.096 102.697 50.219 1.00 0.82 \ ATOM 25 C ARG C 12 22.436 101.344 49.610 1.00 0.82 \ ATOM 26 O ARG C 12 21.561 100.656 49.088 1.00 0.82 \ ATOM 27 CB ARG C 12 22.337 103.802 49.187 1.00 0.82 \ ATOM 28 CG ARG C 12 21.520 103.669 47.910 1.00 0.82 \ ATOM 29 CD ARG C 12 22.052 104.606 46.839 1.00 0.82 \ ATOM 30 NE ARG C 12 23.430 104.268 46.493 1.00 0.82 \ ATOM 31 CZ ARG C 12 24.198 104.971 45.666 1.00 0.82 \ ATOM 32 NH1 ARG C 12 23.728 106.066 45.086 1.00 0.82 \ ATOM 33 NH2 ARG C 12 25.442 104.576 45.424 1.00 0.82 \ ATOM 34 N ASP C 13 23.710 100.967 49.673 1.00 0.82 \ ATOM 35 CA ASP C 13 24.129 99.685 49.127 1.00 0.82 \ ATOM 36 C ASP C 13 23.703 98.592 50.097 1.00 0.82 \ ATOM 37 O ASP C 13 23.716 97.410 49.760 1.00 0.82 \ ATOM 38 CB ASP C 13 25.645 99.642 48.920 1.00 0.82 \ ATOM 39 CG ASP C 13 26.082 98.450 48.085 1.00 0.82 \ ATOM 40 OD1 ASP C 13 25.702 98.382 46.895 1.00 0.82 \ ATOM 41 OD2 ASP C 13 26.798 97.576 48.619 1.00 0.82 \ ATOM 42 N PHE C 14 23.341 99.000 51.309 1.00 0.82 \ ATOM 43 CA PHE C 14 22.861 98.076 52.330 1.00 0.82 \ ATOM 44 C PHE C 14 21.375 97.984 52.045 1.00 0.82 \ ATOM 45 O PHE C 14 20.780 96.906 52.033 1.00 0.82 \ ATOM 46 CB PHE C 14 23.054 98.659 53.732 1.00 0.82 \ ATOM 47 CG PHE C 14 21.963 98.277 54.699 1.00 0.82 \ ATOM 48 CD1 PHE C 14 21.916 97.002 55.255 1.00 0.82 \ ATOM 49 CD2 PHE C 14 20.950 99.180 55.010 1.00 0.82 \ ATOM 50 CE1 PHE C 14 20.873 96.630 56.106 1.00 0.82 \ ATOM 51 CE2 PHE C 14 19.904 98.820 55.856 1.00 0.82 \ ATOM 52 CZ PHE C 14 19.864 97.542 56.406 1.00 0.82 \ ATOM 53 N LEU C 15 20.795 99.158 51.822 1.00 -0.76 \ ATOM 54 CA LEU C 15 19.383 99.312 51.524 1.00 -0.76 \ ATOM 55 C LEU C 15 19.006 98.326 50.426 1.00 -0.76 \ ATOM 56 O LEU C 15 17.970 97.661 50.497 1.00 -0.76 \ ATOM 57 CB LEU C 15 19.125 100.750 51.064 1.00 -0.76 \ ATOM 58 CG LEU C 15 17.696 101.269 50.900 1.00 -0.76 \ ATOM 59 CD1 LEU C 15 16.948 101.175 52.218 1.00 -0.76 \ ATOM 60 CD2 LEU C 15 17.748 102.711 50.424 1.00 -0.76 \ ATOM 61 N TYR C 16 19.863 98.237 49.413 1.00 0.82 \ ATOM 62 CA TYR C 16 19.648 97.332 48.288 1.00 0.82 \ ATOM 63 C TYR C 16 19.473 95.902 48.782 1.00 0.82 \ ATOM 64 O TYR C 16 18.560 95.196 48.372 1.00 0.82 \ ATOM 65 CB TYR C 16 20.841 97.397 47.329 1.00 0.82 \ ATOM 66 CG TYR C 16 20.833 98.588 46.397 1.00 0.82 \ ATOM 67 CD1 TYR C 16 20.165 99.767 46.740 1.00 0.82 \ ATOM 68 CD2 TYR C 16 21.514 98.544 45.179 1.00 0.82 \ ATOM 69 CE1 TYR C 16 20.174 100.868 45.900 1.00 0.82 \ ATOM 70 CE2 TYR C 16 21.531 99.639 44.329 1.00 0.82 \ ATOM 71 CZ TYR C 16 20.859 100.798 44.697 1.00 0.82 \ ATOM 72 OH TYR C 16 20.875 101.888 43.862 1.00 0.82 \ ATOM 73 N TYR C 17 20.358 95.493 49.674 1.00 -0.77 \ ATOM 74 CA TYR C 17 20.362 94.161 50.260 1.00 -0.77 \ ATOM 75 C TYR C 17 19.122 93.938 51.136 1.00 -0.77 \ ATOM 76 O TYR C 17 18.438 92.920 51.020 1.00 -0.77 \ ATOM 77 CB TYR C 17 21.642 94.075 51.105 1.00 -0.77 \ ATOM 78 CG TYR C 17 21.906 92.801 51.868 1.00 -0.77 \ ATOM 79 CD1 TYR C 17 22.447 91.684 51.235 1.00 -0.77 \ ATOM 80 CD2 TYR C 17 21.682 92.739 53.243 1.00 -0.77 \ ATOM 81 CE1 TYR C 17 22.766 90.537 51.953 1.00 -0.77 \ ATOM 82 CE2 TYR C 17 21.993 91.601 53.971 1.00 -0.77 \ ATOM 83 CZ TYR C 17 22.536 90.503 53.322 1.00 -0.77 \ ATOM 84 OH TYR C 17 22.844 89.373 54.043 1.00 -0.77 \ ATOM 85 N ALA C 18 18.843 94.893 52.017 1.00 0.82 \ ATOM 86 CA ALA C 18 17.689 94.787 52.902 1.00 0.82 \ ATOM 87 C ALA C 18 16.428 94.665 52.059 1.00 0.82 \ ATOM 88 O ALA C 18 15.488 93.959 52.423 1.00 0.82 \ ATOM 89 CB ALA C 18 17.601 96.011 53.800 1.00 0.82 \ ATOM 90 N THR C 19 16.419 95.367 50.930 1.00 0.82 \ ATOM 91 CA THR C 19 15.288 95.341 50.012 1.00 0.82 \ ATOM 92 C THR C 19 15.260 94.011 49.266 1.00 0.82 \ ATOM 93 O THR C 19 14.338 93.213 49.444 1.00 0.82 \ ATOM 94 CB THR C 19 15.375 96.509 48.995 1.00 0.82 \ ATOM 95 OG1 THR C 19 14.988 97.731 49.641 1.00 0.82 \ ATOM 96 CG2 THR C 19 14.474 96.258 47.794 1.00 0.82 \ ATOM 97 N ALA C 20 16.280 93.774 48.444 1.00 -0.76 \ ATOM 98 CA ALA C 20 16.386 92.540 47.667 1.00 -0.76 \ ATOM 99 C ALA C 20 16.091 91.317 48.529 1.00 -0.76 \ ATOM 100 O ALA C 20 15.440 90.377 48.079 1.00 -0.76 \ ATOM 101 CB ALA C 20 17.782 92.429 47.057 1.00 -0.76 \ ATOM 102 N GLY C 21 16.575 91.341 49.768 1.00 -0.77 \ ATOM 103 CA GLY C 21 16.354 90.236 50.686 1.00 -0.77 \ ATOM 104 C GLY C 21 14.898 90.132 51.093 1.00 -0.77 \ ATOM 105 O GLY C 21 14.327 89.041 51.105 1.00 -0.77 \ ATOM 106 N ALA C 22 14.296 91.266 51.436 1.00 -1.75 \ ATOM 107 CA ALA C 22 12.893 91.295 51.825 1.00 -1.75 \ ATOM 108 C ALA C 22 12.076 90.756 50.656 1.00 -1.75 \ ATOM 109 O ALA C 22 11.127 89.990 50.843 1.00 -1.75 \ ATOM 110 CB ALA C 22 12.469 92.719 52.150 1.00 -1.75 \ ATOM 111 N GLY C 23 12.459 91.158 49.449 1.00 0.82 \ ATOM 112 CA GLY C 23 11.761 90.696 48.268 1.00 0.82 \ ATOM 113 C GLY C 23 11.796 89.183 48.205 1.00 0.82 \ ATOM 114 O GLY C 23 10.763 88.524 48.340 1.00 0.82 \ ATOM 115 N ALA C 24 12.991 88.630 48.016 1.00 -0.81 \ ATOM 116 CA ALA C 24 13.172 87.184 47.929 1.00 -0.81 \ ATOM 117 C ALA C 24 12.407 86.438 49.019 1.00 -0.81 \ ATOM 118 O ALA C 24 11.884 85.349 48.780 1.00 -0.81 \ ATOM 119 CB ALA C 24 14.656 86.837 48.000 1.00 -0.81 \ ATOM 120 N VAL C 25 12.344 87.017 50.213 1.00 0.82 \ ATOM 121 CA VAL C 25 11.629 86.384 51.316 1.00 0.82 \ ATOM 122 C VAL C 25 10.150 86.260 50.972 1.00 0.82 \ ATOM 123 O VAL C 25 9.553 85.190 51.122 1.00 0.82 \ ATOM 124 CB VAL C 25 11.750 87.198 52.624 1.00 0.82 \ ATOM 125 CG1 VAL C 25 10.834 86.614 53.673 1.00 0.82 \ ATOM 126 CG2 VAL C 25 13.181 87.179 53.134 1.00 0.82 \ ATOM 127 N ALA C 26 9.566 87.365 50.519 1.00 -0.81 \ ATOM 128 CA ALA C 26 8.157 87.393 50.146 1.00 -0.81 \ ATOM 129 C ALA C 26 7.914 86.449 48.980 1.00 -0.81 \ ATOM 130 O ALA C 26 7.017 85.601 49.025 1.00 -0.81 \ ATOM 131 CB ALA C 26 7.746 88.803 49.761 1.00 -0.81 \ ATOM 132 N THR C 27 8.731 86.602 47.941 1.00 -0.80 \ ATOM 133 CA THR C 27 8.640 85.783 46.733 1.00 -0.80 \ ATOM 134 C THR C 27 8.503 84.299 47.067 1.00 -0.80 \ ATOM 135 O THR C 27 7.842 83.546 46.347 1.00 -0.80 \ ATOM 136 CB THR C 27 9.889 85.953 45.843 1.00 -0.80 \ ATOM 137 OG1 THR C 27 10.099 87.342 45.566 1.00 -0.80 \ ATOM 138 CG2 THR C 27 9.704 85.201 44.531 1.00 -0.80 \ ATOM 139 N GLY C 28 9.139 83.892 48.161 1.00 0.82 \ ATOM 140 CA GLY C 28 9.095 82.505 48.592 1.00 0.82 \ ATOM 141 C GLY C 28 7.863 82.186 49.410 1.00 0.82 \ ATOM 142 O GLY C 28 7.304 81.093 49.303 1.00 0.82 \ ATOM 143 N ALA C 29 7.440 83.140 50.232 1.00 -1.72 \ ATOM 144 CA ALA C 29 6.255 82.959 51.060 1.00 -1.72 \ ATOM 145 C ALA C 29 5.066 82.810 50.124 1.00 -1.72 \ ATOM 146 O ALA C 29 4.068 82.165 50.453 1.00 -1.72 \ ATOM 147 CB ALA C 29 6.055 84.165 51.967 1.00 -1.72 \ ATOM 148 N ALA C 30 5.192 83.418 48.951 1.00 0.82 \ ATOM 149 CA ALA C 30 4.148 83.373 47.941 1.00 0.82 \ ATOM 150 C ALA C 30 4.163 82.014 47.255 1.00 0.82 \ ATOM 151 O ALA C 30 3.147 81.320 47.192 1.00 0.82 \ ATOM 152 CB ALA C 30 4.374 84.482 46.909 1.00 0.82 \ ATOM 153 N VAL C 31 5.337 81.640 46.759 1.00 -1.72 \ ATOM 154 CA VAL C 31 5.526 80.385 46.046 1.00 -1.72 \ ATOM 155 C VAL C 31 5.230 79.100 46.817 1.00 -1.72 \ ATOM 156 O VAL C 31 4.477 78.258 46.332 1.00 -1.72 \ ATOM 157 CB VAL C 31 6.961 80.300 45.462 1.00 -1.72 \ ATOM 158 CG1 VAL C 31 7.206 78.914 44.871 1.00 -1.72 \ ATOM 159 CG2 VAL C 31 7.141 81.363 44.378 1.00 -1.72 \ ATOM 160 N TRP C 32 5.801 78.945 48.009 1.00 0.82 \ ATOM 161 CA TRP C 32 5.589 77.721 48.788 1.00 0.82 \ ATOM 162 C TRP C 32 4.149 77.225 48.820 1.00 0.82 \ ATOM 163 O TRP C 32 3.902 76.040 48.586 1.00 0.82 \ ATOM 164 CB TRP C 32 6.091 77.883 50.228 1.00 0.82 \ ATOM 165 CG TRP C 32 5.658 76.751 51.125 1.00 0.82 \ ATOM 166 CD1 TRP C 32 4.982 76.860 52.306 1.00 0.82 \ ATOM 167 CD2 TRP C 32 5.811 75.342 50.881 1.00 0.82 \ ATOM 168 NE1 TRP C 32 4.698 75.613 52.813 1.00 0.82 \ ATOM 169 CE2 TRP C 32 5.193 74.662 51.959 1.00 0.82 \ ATOM 170 CE3 TRP C 32 6.404 74.589 49.856 1.00 0.82 \ ATOM 171 CZ2 TRP C 32 5.151 73.265 52.043 1.00 0.82 \ ATOM 172 CZ3 TRP C 32 6.361 73.197 49.942 1.00 0.82 \ ATOM 173 CH2 TRP C 32 5.736 72.552 51.030 1.00 0.82 \ ATOM 174 N PRO C 33 3.176 78.108 49.121 1.00 0.82 \ ATOM 175 CA PRO C 33 1.791 77.624 49.152 1.00 0.82 \ ATOM 176 C PRO C 33 1.214 77.249 47.793 1.00 0.82 \ ATOM 177 O PRO C 33 0.345 76.381 47.699 1.00 0.82 \ ATOM 178 CB PRO C 33 1.033 78.760 49.828 1.00 0.82 \ ATOM 179 CG PRO C 33 1.790 79.955 49.411 1.00 0.82 \ ATOM 180 CD PRO C 33 3.245 79.524 49.517 1.00 0.82 \ ATOM 181 N LEU C 34 1.690 77.897 46.737 1.00 -1.00 \ ATOM 182 CA LEU C 34 1.207 77.553 45.413 1.00 -1.00 \ ATOM 183 C LEU C 34 1.592 76.094 45.211 1.00 -1.00 \ ATOM 184 O LEU C 34 0.824 75.289 44.670 1.00 -1.00 \ ATOM 185 CB LEU C 34 1.869 78.445 44.360 1.00 -1.00 \ ATOM 186 CG LEU C 34 1.409 79.905 44.409 1.00 -1.00 \ ATOM 187 CD1 LEU C 34 2.132 80.745 43.374 1.00 -1.00 \ ATOM 188 CD2 LEU C 34 -0.084 79.940 44.158 1.00 -1.00 \ ATOM 189 N ILE C 35 2.788 75.761 45.681 1.00 -1.00 \ ATOM 190 CA ILE C 35 3.299 74.407 45.593 1.00 -1.00 \ ATOM 191 C ILE C 35 2.591 73.488 46.588 1.00 -1.00 \ ATOM 192 O ILE C 35 2.101 72.413 46.227 1.00 -1.00 \ ATOM 193 CB ILE C 35 4.823 74.353 45.890 1.00 -1.00 \ ATOM 194 CG1 ILE C 35 5.614 74.935 44.716 1.00 -1.00 \ ATOM 195 CG2 ILE C 35 5.233 72.911 46.176 1.00 -1.00 \ ATOM 196 CD1 ILE C 35 7.128 74.860 44.907 1.00 -1.00 \ ATOM 197 N ASN C 36 2.510 73.928 47.839 1.00 -1.00 \ ATOM 198 CA ASN C 36 1.912 73.118 48.891 1.00 -1.00 \ ATOM 199 C ASN C 36 0.425 72.786 48.765 1.00 -1.00 \ ATOM 200 O ASN C 36 -0.041 71.833 49.390 1.00 -1.00 \ ATOM 201 CB ASN C 36 2.156 73.755 50.259 1.00 -1.00 \ ATOM 202 CG ASN C 36 1.866 72.790 51.397 1.00 -1.00 \ ATOM 203 OD1 ASN C 36 1.124 73.105 52.330 1.00 -1.00 \ ATOM 204 ND2 ASN C 36 2.455 71.594 51.317 1.00 -1.00 \ ATOM 205 N GLN C 37 -0.336 73.545 47.984 1.00 -1.00 \ ATOM 206 CA GLN C 37 -1.757 73.235 47.849 1.00 -1.00 \ ATOM 207 C GLN C 37 -1.973 71.854 47.253 1.00 -1.00 \ ATOM 208 O GLN C 37 -2.991 71.203 47.503 1.00 -1.00 \ ATOM 209 CB GLN C 37 -2.479 74.297 47.000 1.00 -1.00 \ ATOM 210 CG GLN C 37 -1.808 74.703 45.680 1.00 -1.00 \ ATOM 211 CD GLN C 37 -2.129 73.775 44.515 1.00 -1.00 \ ATOM 212 OE1 GLN C 37 -3.129 73.045 44.538 1.00 -1.00 \ ATOM 213 NE2 GLN C 37 -1.290 73.807 43.482 1.00 -1.00 \ ATOM 214 N MET C 38 -0.996 71.402 46.477 1.00 -1.00 \ ATOM 215 CA MET C 38 -1.076 70.103 45.826 1.00 -1.00 \ ATOM 216 C MET C 38 -0.730 68.915 46.702 1.00 -1.00 \ ATOM 217 O MET C 38 -0.868 67.773 46.271 1.00 -1.00 \ ATOM 218 CB MET C 38 -0.194 70.089 44.581 1.00 -1.00 \ ATOM 219 CG MET C 38 -0.835 70.716 43.360 1.00 -1.00 \ ATOM 220 SD MET C 38 0.331 70.926 41.994 1.00 -1.00 \ ATOM 221 CE MET C 38 0.515 69.225 41.444 1.00 -1.00 \ ATOM 222 N ASN C 39 -0.274 69.162 47.920 1.00 -1.00 \ ATOM 223 CA ASN C 39 0.030 68.047 48.793 1.00 -1.00 \ ATOM 224 C ASN C 39 -1.276 67.542 49.397 1.00 -1.00 \ ATOM 225 O ASN C 39 -2.222 68.309 49.584 1.00 -1.00 \ ATOM 226 CB ASN C 39 1.029 68.475 49.865 1.00 -1.00 \ ATOM 227 CG ASN C 39 2.463 68.455 49.352 1.00 -1.00 \ ATOM 228 OD1 ASN C 39 3.246 69.377 49.592 1.00 -1.00 \ ATOM 229 ND2 ASN C 39 2.810 67.383 48.643 1.00 -1.00 \ ATOM 230 N PRO C 40 -1.346 66.241 49.712 1.00 -1.00 \ ATOM 231 CA PRO C 40 -2.551 65.639 50.288 1.00 -1.00 \ ATOM 232 C PRO C 40 -3.372 66.585 51.154 1.00 -1.00 \ ATOM 233 O PRO C 40 -2.863 67.170 52.102 1.00 -1.00 \ ATOM 234 CB PRO C 40 -1.994 64.451 51.065 1.00 -1.00 \ ATOM 235 CG PRO C 40 -0.902 63.985 50.165 1.00 -1.00 \ ATOM 236 CD PRO C 40 -0.211 65.302 49.797 1.00 -1.00 \ ATOM 237 N SER C 41 -4.647 66.739 50.813 1.00 -1.00 \ ATOM 238 CA SER C 41 -5.523 67.614 51.573 1.00 -1.00 \ ATOM 239 C SER C 41 -6.015 66.896 52.829 1.00 -1.00 \ ATOM 240 O SER C 41 -5.923 65.670 52.938 1.00 -1.00 \ ATOM 241 CB SER C 41 -6.705 68.080 50.710 1.00 -1.00 \ ATOM 242 OG SER C 41 -7.441 66.992 50.190 1.00 -1.00 \ ATOM 243 N ALA C 42 -6.557 67.673 53.762 1.00 -1.00 \ ATOM 244 CA ALA C 42 -7.055 67.168 55.038 1.00 -1.00 \ ATOM 245 C ALA C 42 -7.994 65.958 54.996 1.00 -1.00 \ ATOM 246 O ALA C 42 -8.042 65.186 55.955 1.00 -1.00 \ ATOM 247 CB ALA C 42 -7.722 68.308 55.800 1.00 -1.00 \ """, "e2qjpC2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2qjpC2_csv", state=0, origin=1) cmd.zoom("e2qjpC2_csv", animate=-1)