cmd.read_pdbstr("""\ ATOM 1 CA MET D 1 49.501 29.799 -72.240 1.00 -1.00 \ ATOM 2 CA ILE D 2 51.007 32.437 -69.962 1.00 -0.53 \ ATOM 3 CA GLY D 3 53.818 33.238 -67.513 1.00 0.12 \ ATOM 4 CA LEU D 4 54.635 32.411 -63.883 1.00 1.39 \ ATOM 5 CA VAL D 5 56.144 34.681 -61.191 1.00 0.94 \ ATOM 6 CA GLY D 6 56.792 34.808 -57.466 1.00 1.48 \ ATOM 7 CA LYS D 7 53.813 36.098 -55.496 1.00 -0.27 \ ATOM 8 CA LYS D 8 55.556 38.348 -52.986 1.00 3.97 \ ATOM 9 CA VAL D 9 53.017 39.765 -50.520 1.00 -0.40 \ ATOM 10 CA GLY D 10 49.733 41.479 -51.257 1.00 -0.24 \ ATOM 11 CA MET D 11 48.183 44.867 -50.585 1.00 0.35 \ ATOM 12 CA THR D 12 45.261 46.987 -51.714 1.00 -0.24 \ ATOM 13 CA ARG D 13 44.694 50.332 -53.383 1.00 0.05 \ ATOM 14 CA ILE D 14 42.128 51.505 -50.908 1.00 -0.55 \ ATOM 15 CA PHE D 15 40.007 53.590 -53.158 1.00 0.91 \ ATOM 16 CA THR D 16 38.568 56.660 -51.503 1.00 -0.54 \ ATOM 17 CA GLU D 17 35.180 55.047 -50.758 1.00 -0.33 \ ATOM 18 CA ASP D 18 35.986 51.419 -51.583 1.00 -0.49 \ ATOM 19 CA GLY D 19 39.267 49.645 -51.165 1.00 0.34 \ ATOM 20 CA VAL D 20 37.603 47.368 -53.692 1.00 -0.69 \ ATOM 21 CA SER D 21 41.109 47.250 -55.024 1.00 -0.68 \ ATOM 22 CA ILE D 22 42.223 44.399 -52.784 1.00 -0.38 \ ATOM 23 CA PRO D 23 44.663 42.727 -55.245 1.00 -0.10 \ ATOM 24 CA VAL D 24 47.872 40.920 -54.425 1.00 0.61 \ ATOM 25 CA THR D 25 51.117 42.185 -55.910 1.00 3.21 \ ATOM 26 CA VAL D 26 52.437 39.472 -58.214 1.00 -0.47 \ ATOM 27 CA ILE D 27 55.554 40.837 -59.914 1.00 1.76 \ ATOM 28 CA GLU D 28 55.104 39.358 -63.395 1.00 -0.55 \ ATOM 29 CA VAL D 29 58.659 39.277 -64.717 1.00 0.46 \ ATOM 30 CA GLU D 30 58.770 38.060 -68.354 1.00 -0.73 \ ATOM 31 CA ALA D 31 59.996 34.647 -69.503 1.00 -0.23 \ ATOM 32 CA ASN D 32 62.311 33.029 -72.028 1.00 -0.19 \ ATOM 33 CA ARG D 33 60.526 31.062 -74.741 1.00 -0.78 \ ATOM 34 CA VAL D 34 62.660 29.707 -77.589 1.00 1.33 \ ATOM 35 CA THR D 35 62.125 26.250 -76.101 1.00 0.32 \ ATOM 36 CA GLN D 36 59.330 24.095 -77.506 1.00 -0.55 \ ATOM 37 CA VAL D 37 58.588 21.124 -79.756 1.00 -0.44 \ ATOM 38 CA LYS D 38 55.788 19.637 -81.887 1.00 -0.62 \ ATOM 39 CA ASP D 39 55.409 16.133 -83.327 1.00 -0.67 \ ATOM 40 CA LEU D 40 59.023 15.292 -84.080 1.00 -0.81 \ ATOM 41 CA ALA D 41 59.767 13.473 -80.839 1.00 -0.30 \ ATOM 42 CA ASN D 42 57.769 15.020 -77.932 1.00 -0.45 \ ATOM 43 CA ASP D 43 54.190 15.785 -76.882 1.00 -0.55 \ ATOM 44 CA GLY D 44 52.130 18.691 -78.193 1.00 -0.55 \ ATOM 45 CA TYR D 45 52.768 22.429 -78.332 1.00 -0.76 \ ATOM 46 CA ARG D 46 54.395 23.392 -75.047 1.00 -0.98 \ ATOM 47 CA ALA D 47 56.711 26.277 -74.202 1.00 -0.71 \ ATOM 48 CA ILE D 48 59.414 26.456 -71.544 1.00 -0.32 \ ATOM 49 CA GLN D 49 59.492 29.419 -69.190 1.00 -0.45 \ ATOM 50 CA VAL D 50 62.095 30.509 -66.639 1.00 0.52 \ ATOM 51 CA THR D 51 62.319 33.746 -64.681 1.00 -0.05 \ ATOM 52 CA THR D 52 64.390 34.657 -61.648 1.00 -0.54 \ ATOM 53 CA GLY D 53 67.850 35.783 -60.649 1.00 -0.78 \ ATOM 54 CA ALA D 54 69.415 32.377 -60.122 1.00 -0.69 \ ATOM 55 CA LYS D 55 73.096 32.857 -59.370 1.00 -0.60 \ ATOM 56 CA LYS D 56 74.328 31.807 -62.797 1.00 -0.50 \ ATOM 57 CA ALA D 57 77.708 31.868 -61.065 1.00 -0.32 \ ATOM 58 CA ASN D 58 77.414 28.702 -58.972 1.00 -0.59 \ ATOM 59 CA ARG D 59 74.529 26.468 -57.859 1.00 -0.62 \ ATOM 60 CA VAL D 60 72.989 24.922 -60.951 1.00 -0.67 \ ATOM 61 CA THR D 61 75.269 23.402 -63.593 1.00 -0.05 \ ATOM 62 CA LYS D 62 73.756 20.976 -66.129 1.00 -0.41 \ ATOM 63 CA PRO D 63 70.666 23.168 -66.382 1.00 -0.44 \ ATOM 64 CA GLU D 64 72.727 26.243 -67.320 1.00 -0.72 \ ATOM 65 CA ALA D 65 74.281 24.115 -70.035 1.00 -0.50 \ ATOM 66 CA GLY D 66 70.887 22.658 -70.869 1.00 -0.59 \ ATOM 67 CA HIS D 67 69.838 26.249 -71.382 1.00 -0.83 \ ATOM 68 CA PHE D 68 72.489 26.782 -74.065 1.00 -0.48 \ ATOM 69 CA ALA D 69 70.056 25.433 -76.666 1.00 -0.51 \ ATOM 70 CA LYS D 70 69.666 28.953 -78.088 1.00 -0.35 \ ATOM 71 CA ALA D 71 68.390 30.656 -74.938 1.00 -0.67 \ ATOM 72 CA GLY D 72 69.353 33.499 -72.620 1.00 -0.25 \ ATOM 73 CA VAL D 73 69.906 33.743 -68.865 1.00 -0.57 \ ATOM 74 CA GLU D 74 68.946 30.630 -66.912 1.00 -0.36 \ ATOM 75 CA ALA D 75 66.548 31.385 -64.068 1.00 -0.62 \ ATOM 76 CA GLY D 76 64.912 29.009 -61.597 1.00 -0.75 \ ATOM 77 CA ARG D 77 62.776 25.996 -62.468 1.00 -0.78 \ ATOM 78 CA GLY D 78 61.318 25.890 -65.946 1.00 -0.71 \ ATOM 79 CA LEU D 79 57.626 25.363 -66.600 1.00 -0.17 \ ATOM 80 CA TRP D 80 55.779 24.519 -69.815 1.00 -0.75 \ ATOM 81 CA GLU D 81 52.720 25.681 -71.741 1.00 -0.62 \ ATOM 82 CA PHE D 82 50.439 24.616 -74.581 1.00 -0.41 \ ATOM 83 CA ARG D 83 48.706 25.776 -77.743 1.00 -0.67 \ ATOM 84 CA LEU D 84 47.721 29.388 -78.366 1.00 -0.83 \ ATOM 85 CA ALA D 85 49.712 29.870 -81.555 1.00 -0.75 \ ATOM 86 CA GLU D 86 52.668 31.703 -80.024 1.00 -0.42 \ ATOM 87 CA GLY D 87 56.073 32.720 -81.347 1.00 -0.62 \ ATOM 88 CA GLU D 88 59.134 30.492 -81.186 1.00 -0.60 \ ATOM 89 CA GLU D 89 62.866 29.933 -81.585 1.00 -0.53 \ ATOM 90 CA PHE D 90 62.424 31.510 -85.007 1.00 -0.60 \ ATOM 91 CA THR D 91 62.303 35.161 -83.924 1.00 -0.49 \ ATOM 92 CA VAL D 92 63.580 35.832 -80.435 1.00 -0.63 \ ATOM 93 CA GLY D 93 63.182 33.422 -77.545 1.00 -0.35 \ ATOM 94 CA GLN D 94 62.058 35.988 -75.032 1.00 -0.57 \ ATOM 95 CA SER D 95 58.441 36.456 -73.982 1.00 -0.71 \ ATOM 96 CA ILE D 96 57.207 39.476 -72.011 1.00 -0.41 \ ATOM 97 CA SER D 97 54.695 40.286 -69.276 1.00 -0.72 \ ATOM 98 CA VAL D 98 52.005 41.200 -71.804 1.00 -0.46 \ ATOM 99 CA GLU D 99 50.796 40.562 -75.359 1.00 -0.36 \ ATOM 100 CA LEU D 100 47.387 39.765 -76.868 1.00 -0.82 \ ATOM 101 CA PHE D 101 45.765 37.850 -73.976 1.00 1.20 \ ATOM 102 CA ALA D 102 43.516 40.916 -73.485 1.00 -0.69 \ ATOM 103 CA ASP D 103 42.864 42.974 -70.353 1.00 -0.46 \ ATOM 104 CA VAL D 104 40.443 43.546 -67.456 1.00 -0.58 \ ATOM 105 CA LYS D 105 39.323 39.934 -67.866 1.00 -0.35 \ ATOM 106 CA LYS D 106 39.768 37.514 -64.955 1.00 -0.90 \ ATOM 107 CA VAL D 107 43.071 35.719 -64.473 1.00 1.58 \ ATOM 108 CA ASP D 108 43.318 32.671 -62.211 1.00 -0.68 \ ATOM 109 CA VAL D 109 46.340 31.987 -60.022 1.00 1.10 \ ATOM 110 CA THR D 110 47.807 28.874 -58.357 1.00 -0.53 \ ATOM 111 CA GLY D 111 50.092 29.558 -55.417 1.00 1.91 \ ATOM 112 CA THR D 112 51.466 26.882 -53.117 1.00 -0.75 \ ATOM 113 CA SER D 113 49.174 25.933 -50.250 1.00 0.34 \ ATOM 114 CA LYS D 114 51.354 26.377 -47.164 1.00 0.53 \ ATOM 115 CA GLY D 115 50.899 23.382 -44.919 1.00 0.87 \ ATOM 116 CA LYS D 116 50.309 23.501 -41.185 1.00 0.15 \ ATOM 117 CA GLY D 117 52.135 20.212 -41.062 1.00 3.86 \ ATOM 118 CA PHE D 118 50.266 17.307 -39.505 1.00 0.71 \ ATOM 119 CA ALA D 119 46.616 18.287 -38.967 1.00 -0.08 \ ATOM 120 CA GLY D 120 43.520 16.681 -37.520 1.00 2.93 \ ATOM 121 CA THR D 121 39.813 16.095 -37.934 1.00 -0.56 \ ATOM 122 CA VAL D 122 38.993 19.351 -36.202 1.00 1.26 \ ATOM 123 CA LYS D 123 41.807 20.840 -38.303 1.00 0.42 \ ATOM 124 CA ARG D 124 41.130 19.436 -41.795 1.00 2.15 \ ATOM 125 CA TRP D 125 37.397 20.089 -41.465 1.00 1.00 \ ATOM 126 CA ASN D 126 36.711 22.622 -38.722 1.00 0.91 \ ATOM 127 CA PHE D 127 33.915 20.497 -37.282 1.00 -0.17 \ ATOM 128 CA ARG D 128 33.711 18.279 -34.169 1.00 -0.36 \ ATOM 129 CA THR D 129 31.969 19.250 -30.955 1.00 0.25 \ ATOM 130 CA GLN D 130 32.662 18.469 -27.304 1.00 -0.40 \ ATOM 131 CA ASP D 131 34.053 20.315 -24.317 1.00 -0.80 \ ATOM 132 CA ALA D 132 37.381 20.610 -22.531 1.00 -0.46 \ ATOM 133 CA THR D 133 36.774 21.589 -18.966 1.00 -0.01 \ ATOM 134 CA HIS D 134 34.398 18.928 -17.411 1.00 0.26 \ ATOM 135 CA GLY D 135 35.512 16.713 -20.154 1.00 0.47 \ ATOM 136 CA ASN D 136 39.139 15.916 -19.993 1.00 -0.10 \ ATOM 137 CA SER D 137 37.644 12.653 -21.318 1.00 0.09 \ ATOM 138 CA LEU D 138 37.022 13.403 -24.938 1.00 -0.72 \ ATOM 139 CA SER D 139 38.600 16.895 -24.685 1.00 -0.97 \ ATOM 140 CA HIS D 140 37.107 18.320 -27.845 1.00 -0.77 \ ATOM 141 CA ARG D 141 39.765 17.944 -30.547 1.00 1.56 \ ATOM 142 CA VAL D 142 39.663 14.125 -30.551 1.00 -0.62 \ ATOM 143 CA PRO D 143 38.961 12.736 -34.011 1.00 -0.16 \ ATOM 144 CA GLY D 144 35.900 12.761 -31.989 1.00 2.18 \ ATOM 145 CA SER D 145 36.293 9.074 -32.024 1.00 1.48 \ ATOM 146 CA ILE D 146 35.202 7.646 -35.526 1.00 -0.23 \ ATOM 147 CA GLY D 147 34.310 4.118 -36.726 1.00 1.49 \ ATOM 148 CA GLN D 148 31.991 1.205 -35.938 1.00 -0.61 \ ATOM 149 CA ASN D 149 31.704 -1.634 -33.292 1.00 -0.76 \ ATOM 150 CA GLN D 150 31.511 -5.003 -34.781 1.00 -0.39 \ ATOM 151 CA THR D 151 31.324 -4.356 -38.496 1.00 -0.88 \ ATOM 152 CA PRO D 152 32.756 -5.174 -41.892 1.00 -0.70 \ ATOM 153 CA GLY D 153 34.028 -1.737 -41.906 1.00 -0.23 \ ATOM 154 CA LYS D 154 37.473 -1.319 -43.400 1.00 -0.45 \ ATOM 155 CA VAL D 155 37.649 1.848 -41.312 1.00 0.79 \ ATOM 156 CA PHE D 156 36.357 2.949 -44.678 1.00 -0.79 \ ATOM 157 CA LYS D 157 39.297 4.038 -46.785 1.00 0.13 \ ATOM 158 CA GLY D 158 39.565 7.737 -47.497 1.00 0.07 \ ATOM 159 CA LYS D 159 37.644 8.858 -44.426 1.00 -0.30 \ ATOM 160 CA LYS D 160 39.096 12.169 -43.265 1.00 -0.33 \ ATOM 161 CA MET D 161 41.631 11.287 -40.597 1.00 0.25 \ ATOM 162 CA ALA D 162 44.414 13.371 -39.154 1.00 -0.01 \ ATOM 163 CA GLY D 163 46.655 13.569 -42.165 1.00 2.71 \ ATOM 164 CA GLN D 164 49.477 16.034 -42.531 1.00 1.03 \ ATOM 165 CA MET D 165 49.908 19.206 -44.516 1.00 -0.39 \ ATOM 166 CA GLY D 166 52.531 20.897 -46.636 1.00 4.08 \ ATOM 167 CA ASN D 167 53.245 22.693 -49.883 1.00 -0.70 \ ATOM 168 CA GLU D 168 50.483 21.739 -52.314 1.00 -0.55 \ ATOM 169 CA ARG D 169 48.902 23.169 -55.454 1.00 -0.62 \ ATOM 170 CA VAL D 170 45.575 24.974 -55.287 1.00 -0.48 \ ATOM 171 CA THR D 171 44.192 27.072 -58.136 1.00 -0.35 \ ATOM 172 CA VAL D 172 41.752 29.843 -57.241 1.00 -0.49 \ ATOM 173 CA GLN D 173 40.172 30.462 -60.649 1.00 -0.69 \ ATOM 174 CA SER D 174 38.420 33.713 -61.610 1.00 0.02 \ ATOM 175 CA LEU D 175 39.765 36.832 -59.880 1.00 0.08 \ ATOM 176 CA ASP D 176 39.673 39.933 -62.087 1.00 -0.60 \ ATOM 177 CA VAL D 177 42.674 42.261 -62.343 1.00 2.37 \ ATOM 178 CA VAL D 178 42.834 45.927 -61.342 1.00 -0.20 \ ATOM 179 CA ARG D 179 46.203 46.842 -62.856 1.00 -0.64 \ ATOM 180 CA VAL D 180 49.488 45.995 -64.558 1.00 0.02 \ ATOM 181 CA ASP D 181 52.719 47.815 -65.374 1.00 -0.58 \ ATOM 182 CA ALA D 182 54.634 45.923 -68.058 1.00 -0.65 \ ATOM 183 CA GLU D 183 58.438 45.838 -67.853 1.00 -0.26 \ ATOM 184 CA ARG D 184 57.975 47.156 -64.310 1.00 -0.62 \ ATOM 185 CA ASN D 185 56.344 43.784 -63.768 1.00 -0.01 \ ATOM 186 CA LEU D 186 53.491 44.611 -61.408 1.00 -0.36 \ ATOM 187 CA LEU D 187 50.389 42.478 -61.792 1.00 1.78 \ ATOM 188 CA LEU D 188 47.472 42.842 -59.386 1.00 -0.41 \ ATOM 189 CA VAL D 189 44.474 40.604 -58.694 1.00 2.01 \ ATOM 190 CA LYS D 190 41.840 40.771 -55.946 1.00 -0.72 \ ATOM 191 CA GLY D 191 42.894 39.092 -52.719 1.00 2.84 \ ATOM 192 CA ALA D 192 43.096 35.298 -52.516 1.00 -0.11 \ ATOM 193 CA VAL D 193 46.284 33.932 -54.125 1.00 1.41 \ ATOM 194 CA PRO D 194 47.745 30.858 -52.329 1.00 1.40 \ ATOM 195 CA GLY D 195 51.206 30.859 -50.822 1.00 3.28 \ ATOM 196 CA ALA D 196 52.849 33.614 -48.794 1.00 -0.79 \ ATOM 197 CA THR D 197 55.675 35.414 -50.595 1.00 -0.59 \ ATOM 198 CA GLY D 198 57.497 32.094 -50.819 1.00 -0.00 \ ATOM 199 CA SER D 199 55.752 30.603 -53.856 1.00 0.03 \ ATOM 200 CA ASP D 200 55.841 30.784 -57.656 1.00 -0.78 \ ATOM 201 CA LEU D 201 52.293 30.780 -59.005 1.00 1.34 \ ATOM 202 CA ILE D 202 51.415 30.107 -62.656 1.00 -0.56 \ ATOM 203 CA VAL D 203 48.945 32.974 -63.245 1.00 2.12 \ ATOM 204 CA LYS D 204 47.083 31.562 -66.281 1.00 -0.59 \ ATOM 205 CA PRO D 205 44.509 33.502 -68.353 1.00 -0.57 \ ATOM 206 CA ALA D 206 41.290 31.772 -67.280 1.00 0.34 \ ATOM 207 CA VAL D 207 40.313 28.171 -68.019 1.00 -0.47 \ ATOM 208 CA LYS D 208 36.761 29.299 -67.196 1.00 -1.00 \ ATOM 209 CA ALA D 209 35.546 27.178 -70.108 1.00 -1.00 \ """, "e2rdoD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2rdoD1_csv", state=0, origin=1) cmd.zoom("e2rdoD1_csv", animate=-1)