cmd.read_pdbstr("""\ ATOM 1 N GLY A 47 -91.283 31.479 4.974 1.00 0.78 \ ATOM 2 CA GLY A 47 -90.201 30.875 5.730 1.00 0.78 \ ATOM 3 C GLY A 47 -88.846 31.401 5.299 1.00 0.78 \ ATOM 4 O GLY A 47 -87.814 30.787 5.568 1.00 0.78 \ ATOM 5 N SER A 48 -88.850 32.551 4.634 1.00 -0.78 \ ATOM 6 CA SER A 48 -87.615 33.132 4.114 1.00 -0.78 \ ATOM 7 C SER A 48 -86.660 33.559 5.236 1.00 -0.78 \ ATOM 8 O SER A 48 -85.448 33.380 5.132 1.00 -0.78 \ ATOM 9 CB SER A 48 -87.929 34.307 3.184 1.00 -0.78 \ ATOM 10 OG SER A 48 -86.817 34.603 2.355 1.00 -0.78 \ ATOM 11 N HIS A 49 -87.198 34.116 6.314 1.00 -0.32 \ ATOM 12 CA HIS A 49 -86.352 34.503 7.438 1.00 -0.32 \ ATOM 13 C HIS A 49 -85.632 33.290 8.038 1.00 -0.32 \ ATOM 14 O HIS A 49 -84.489 33.391 8.496 1.00 -0.32 \ ATOM 15 CB HIS A 49 -87.165 35.240 8.503 1.00 -0.32 \ ATOM 16 CG HIS A 49 -87.391 36.688 8.198 1.00 -0.32 \ ATOM 17 ND1 HIS A 49 -88.044 37.539 9.062 1.00 -0.32 \ ATOM 18 CD2 HIS A 49 -87.045 37.437 7.121 1.00 -0.32 \ ATOM 19 CE1 HIS A 49 -88.094 38.750 8.532 1.00 -0.32 \ ATOM 20 NE2 HIS A 49 -87.498 38.713 7.355 1.00 -0.32 \ ATOM 21 N MET A 50 -86.283 32.134 8.025 1.00 -0.99 \ ATOM 22 CA MET A 50 -85.628 30.937 8.532 1.00 -0.99 \ ATOM 23 C MET A 50 -84.445 30.603 7.619 1.00 -0.99 \ ATOM 24 O MET A 50 -83.380 30.193 8.080 1.00 -0.99 \ ATOM 25 CB MET A 50 -86.609 29.768 8.629 1.00 -0.99 \ ATOM 26 CG MET A 50 -86.094 28.615 9.477 1.00 -0.99 \ ATOM 27 SD MET A 50 -87.225 27.219 9.486 1.00 -0.99 \ ATOM 28 CE MET A 50 -86.461 26.190 10.730 1.00 -0.99 \ ATOM 29 N GLY A 51 -84.644 30.802 6.320 1.00 -0.64 \ ATOM 30 CA GLY A 51 -83.581 30.663 5.349 1.00 -0.64 \ ATOM 31 C GLY A 51 -82.438 31.621 5.647 1.00 -0.64 \ ATOM 32 O GLY A 51 -81.281 31.210 5.675 1.00 -0.64 \ ATOM 33 N ASP A 52 -82.762 32.894 5.879 1.00 -0.75 \ ATOM 34 CA ASP A 52 -81.741 33.905 6.180 1.00 -0.75 \ ATOM 35 C ASP A 52 -80.847 33.472 7.343 1.00 -0.75 \ ATOM 36 O ASP A 52 -79.623 33.646 7.304 1.00 -0.75 \ ATOM 37 CB ASP A 52 -82.388 35.249 6.520 1.00 -0.75 \ ATOM 38 CG ASP A 52 -83.083 35.896 5.332 1.00 -0.75 \ ATOM 39 OD1 ASP A 52 -82.562 35.823 4.198 1.00 -0.75 \ ATOM 40 OD2 ASP A 52 -84.146 36.514 5.553 1.00 -0.75 \ ATOM 41 N ILE A 53 -81.462 32.912 8.377 1.00 0.87 \ ATOM 42 CA ILE A 53 -80.714 32.445 9.532 1.00 0.87 \ ATOM 43 C ILE A 53 -79.836 31.249 9.166 1.00 0.87 \ ATOM 44 O ILE A 53 -78.740 31.080 9.711 1.00 0.87 \ ATOM 45 CB ILE A 53 -81.650 32.101 10.708 1.00 0.87 \ ATOM 46 CG1 ILE A 53 -82.443 33.346 11.126 1.00 0.87 \ ATOM 47 CG2 ILE A 53 -80.861 31.575 11.883 1.00 0.87 \ ATOM 48 CD1 ILE A 53 -81.561 34.540 11.458 1.00 0.87 \ ATOM 49 N GLY A 54 -80.314 30.413 8.251 1.00 -0.36 \ ATOM 50 CA GLY A 54 -79.485 29.348 7.708 1.00 -0.36 \ ATOM 51 C GLY A 54 -78.195 29.895 7.131 1.00 -0.36 \ ATOM 52 O GLY A 54 -77.110 29.402 7.443 1.00 -0.36 \ ATOM 53 N GLN A 55 -78.317 30.917 6.291 1.00 -1.25 \ ATOM 54 CA GLN A 55 -77.166 31.564 5.678 1.00 -1.25 \ ATOM 55 C GLN A 55 -76.207 32.101 6.738 1.00 -1.25 \ ATOM 56 O GLN A 55 -74.992 31.948 6.612 1.00 -1.25 \ ATOM 57 CB GLN A 55 -77.611 32.685 4.737 1.00 -1.25 \ ATOM 58 CG GLN A 55 -76.474 33.467 4.077 1.00 -1.25 \ ATOM 59 CD GLN A 55 -75.810 32.731 2.914 1.00 -1.25 \ ATOM 60 OE1 GLN A 55 -74.583 32.563 2.882 1.00 -1.25 \ ATOM 61 NE2 GLN A 55 -76.613 32.296 1.954 1.00 -1.25 \ ATOM 62 N LEU A 56 -76.759 32.729 7.775 1.00 0.10 \ ATOM 63 CA LEU A 56 -75.954 33.256 8.875 1.00 0.10 \ ATOM 64 C LEU A 56 -75.154 32.152 9.591 1.00 0.10 \ ATOM 65 O LEU A 56 -73.933 32.275 9.776 1.00 0.10 \ ATOM 66 CB LEU A 56 -76.868 33.982 9.870 1.00 0.10 \ ATOM 67 CG LEU A 56 -76.228 34.662 11.080 1.00 0.10 \ ATOM 68 CD1 LEU A 56 -75.578 35.967 10.631 1.00 0.10 \ ATOM 69 CD2 LEU A 56 -77.263 34.913 12.165 1.00 0.10 \ ATOM 70 N ASN A 57 -75.842 31.088 10.001 1.00 1.78 \ ATOM 71 CA ASN A 57 -75.196 29.970 10.705 1.00 1.78 \ ATOM 72 C ASN A 57 -74.118 29.268 9.877 1.00 1.78 \ ATOM 73 O ASN A 57 -73.141 28.749 10.420 1.00 1.78 \ ATOM 74 CB ASN A 57 -76.229 28.933 11.163 1.00 1.78 \ ATOM 75 CG ASN A 57 -77.043 29.396 12.360 1.00 1.78 \ ATOM 76 OD1 ASN A 57 -76.955 30.550 12.787 1.00 1.78 \ ATOM 77 ND2 ASN A 57 -77.850 28.489 12.905 1.00 1.78 \ ATOM 78 N LYS A 58 -74.310 29.242 8.561 1.00 0.16 \ ATOM 79 CA LYS A 58 -73.304 28.711 7.650 1.00 0.16 \ ATOM 80 C LYS A 58 -72.101 29.632 7.608 1.00 0.16 \ ATOM 81 O LYS A 58 -70.950 29.185 7.603 1.00 0.16 \ ATOM 82 CB LYS A 58 -73.887 28.583 6.245 1.00 0.16 \ ATOM 83 CG LYS A 58 -74.314 27.190 5.880 1.00 0.16 \ ATOM 84 CD LYS A 58 -73.331 26.572 4.896 1.00 0.16 \ ATOM 85 CE LYS A 58 -73.893 25.275 4.317 1.00 0.16 \ ATOM 86 NZ LYS A 58 -74.171 24.268 5.386 1.00 0.16 \ ATOM 87 N ASP A 59 -72.382 30.929 7.586 1.00 1.52 \ ATOM 88 CA ASP A 59 -71.340 31.939 7.592 1.00 1.52 \ ATOM 89 C ASP A 59 -70.503 31.836 8.862 1.00 1.52 \ ATOM 90 O ASP A 59 -69.305 32.108 8.833 1.00 1.52 \ ATOM 91 CB ASP A 59 -71.950 33.340 7.487 1.00 1.52 \ ATOM 92 CG ASP A 59 -72.630 33.582 6.151 1.00 1.52 \ ATOM 93 OD1 ASP A 59 -72.352 32.832 5.190 1.00 1.52 \ ATOM 94 OD2 ASP A 59 -73.447 34.522 6.058 1.00 1.52 \ ATOM 95 N LEU A 60 -71.145 31.462 9.965 1.00 0.90 \ ATOM 96 CA LEU A 60 -70.455 31.321 11.246 1.00 0.90 \ ATOM 97 C LEU A 60 -69.494 30.124 11.213 1.00 0.90 \ ATOM 98 O LEU A 60 -68.287 30.261 11.456 1.00 0.90 \ ATOM 99 CB LEU A 60 -71.463 31.176 12.386 1.00 0.90 \ ATOM 100 CG LEU A 60 -70.870 30.801 13.744 1.00 0.90 \ ATOM 101 CD1 LEU A 60 -69.794 31.822 14.125 1.00 0.90 \ ATOM 102 CD2 LEU A 60 -71.947 30.738 14.801 1.00 0.90 \ ATOM 103 N THR A 61 -70.031 28.949 10.905 1.00 2.60 \ ATOM 104 CA THR A 61 -69.177 27.777 10.725 1.00 2.60 \ ATOM 105 C THR A 61 -67.997 28.120 9.833 1.00 2.60 \ ATOM 106 O THR A 61 -66.835 27.844 10.175 1.00 2.60 \ ATOM 107 CB THR A 61 -69.971 26.592 10.156 1.00 2.60 \ ATOM 108 OG1 THR A 61 -70.975 26.220 11.102 1.00 2.60 \ ATOM 109 CG2 THR A 61 -69.060 25.387 9.898 1.00 2.60 \ ATOM 110 N ASP A 62 -68.273 28.767 8.708 1.00 -0.59 \ ATOM 111 CA ASP A 62 -67.209 29.089 7.764 1.00 -0.59 \ ATOM 112 C ASP A 62 -66.144 29.990 8.362 1.00 -0.59 \ ATOM 113 O ASP A 62 -64.956 29.853 8.051 1.00 -0.59 \ ATOM 114 CB ASP A 62 -67.780 29.719 6.498 1.00 -0.59 \ ATOM 115 CG ASP A 62 -68.480 28.705 5.619 1.00 -0.59 \ ATOM 116 OD1 ASP A 62 -68.318 27.495 5.877 1.00 -0.59 \ ATOM 117 OD2 ASP A 62 -69.185 29.123 4.682 1.00 -0.59 \ ATOM 118 N LEU A 63 -66.561 30.913 9.225 1.00 0.74 \ ATOM 119 CA LEU A 63 -65.599 31.788 9.882 1.00 0.74 \ ATOM 120 C LEU A 63 -64.738 30.997 10.877 1.00 0.74 \ ATOM 121 O LEU A 63 -63.532 31.178 10.940 1.00 0.74 \ ATOM 122 CB LEU A 63 -66.334 32.927 10.597 1.00 0.74 \ """, "e2yfaA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e2yfaA2_csv", state=0, origin=1) cmd.zoom("e2yfaA2_csv", animate=-1)