cmd.read_pdbstr("""\ ATOM 1 CA GLN D 1 99.752 127.056-136.779 0.00 -1.00 \ ATOM 2 CA VAL D 2 96.964 126.866-134.201 0.00 0.36 \ ATOM 3 CA LYS D 3 93.917 128.691-135.608 0.00 -0.18 \ ATOM 4 CA LEU D 4 94.897 132.138-136.973 0.00 2.29 \ ATOM 5 CA LEU D 5 93.453 134.373-134.255 0.00 -0.33 \ ATOM 6 CA GLU D 6 92.729 132.399-131.057 0.00 -1.00 \ ATOM 7 CA GLN D 7 90.746 134.423-128.499 0.00 1.17 \ ATOM 8 CA SER D 8 90.002 133.830-124.800 0.00 0.48 \ ATOM 9 CA GLY D 9 87.074 132.367-122.860 0.00 0.21 \ ATOM 10 CA ALA D 10 83.672 133.498-121.592 0.00 -0.07 \ ATOM 11 CA GLU D 11 84.155 135.535-118.405 0.00 -0.39 \ ATOM 12 CA VAL D 12 81.154 135.756-116.076 0.00 0.11 \ ATOM 13 CA LYS D 13 81.240 139.232-114.533 0.00 -0.11 \ ATOM 14 CA LYS D 14 78.873 140.678-111.936 0.00 -0.35 \ ATOM 15 CA PRO D 15 77.271 144.049-112.906 0.00 0.13 \ ATOM 16 CA GLY D 16 79.742 146.817-112.125 0.00 0.35 \ ATOM 17 CA ALA D 17 82.940 144.860-112.764 0.00 -0.07 \ ATOM 18 CA SER D 18 85.716 144.822-115.376 0.00 -0.39 \ ATOM 19 CA VAL D 19 86.408 142.489-118.321 0.00 0.92 \ ATOM 20 CA LYS D 20 89.567 141.994-120.415 0.00 -0.92 \ ATOM 21 CA VAL D 21 89.351 139.808-123.535 0.00 1.66 \ ATOM 22 CA SER D 22 92.550 138.969-125.440 0.00 -0.88 \ ATOM 23 CA CYS D 23 93.258 138.095-129.092 0.00 2.14 \ ATOM 24 CA LYS D 24 96.331 135.966-129.865 0.00 -0.72 \ ATOM 25 CA ALA D 25 97.655 136.041-133.438 0.00 -0.55 \ ATOM 26 CA SER D 26 99.889 133.723-135.477 0.00 -0.56 \ ATOM 27 CA GLY D 27 101.015 132.703-138.951 0.00 -0.61 \ ATOM 28 CA TYR D 28 101.302 136.304-140.143 0.00 -0.75 \ ATOM 29 CA SER D 29 103.218 139.462-139.207 0.00 -0.62 \ ATOM 30 CA PHE D 30 101.634 141.258-136.235 0.00 0.28 \ ATOM 31 CA THR D 31 103.101 144.742-136.782 0.00 -0.58 \ ATOM 32 CA SER D 32 101.730 144.910-140.339 0.00 -0.77 \ ATOM 33 CA TYR D 33 97.967 144.496-139.788 0.00 -1.14 \ ATOM 34 CA GLY D 34 95.343 146.055-137.518 0.00 -1.16 \ ATOM 35 CA LEU D 35 92.580 144.496-135.390 0.00 0.08 \ ATOM 36 CA HIS D 36 88.919 145.547-135.054 0.00 -1.09 \ ATOM 37 CA TRP D 37 86.505 144.489-132.294 0.00 0.92 \ ATOM 38 CA VAL D 38 82.883 143.569-133.094 0.00 0.57 \ ATOM 39 CA ARG D 39 80.258 142.002-130.800 0.00 -0.21 \ ATOM 40 CA GLN D 40 76.704 140.594-131.077 0.00 1.38 \ ATOM 41 CA ALA D 41 73.810 140.568-128.588 0.00 -0.95 \ ATOM 42 CA PRO D 42 71.645 137.388-128.436 0.00 -0.27 \ ATOM 43 CA GLY D 43 69.121 137.893-131.222 0.00 -0.03 \ ATOM 44 CA GLN D 44 70.513 141.194-132.523 0.00 0.34 \ ATOM 45 CA ARG D 45 72.890 142.479-135.227 0.00 -0.31 \ ATOM 46 CA LEU D 46 76.685 142.880-135.008 0.00 0.89 \ ATOM 47 CA GLU D 47 77.923 146.169-133.519 0.00 -0.41 \ ATOM 48 CA TRP D 48 81.394 147.632-134.128 0.00 -0.12 \ ATOM 49 CA MET D 49 83.243 148.613-130.941 0.00 1.69 \ ATOM 50 CA GLY D 50 86.617 149.889-132.121 0.00 -0.30 \ ATOM 51 CA TRP D 51 90.046 149.386-133.682 0.00 -1.20 \ ATOM 52 CA ILE D 52 93.742 149.487-132.741 0.00 -0.77 \ ATOM 53 CA SER D 53 96.869 149.538-134.917 0.00 -0.95 \ ATOM 54 CA ALA D 54 99.523 146.972-133.981 0.00 -0.92 \ ATOM 55 CA GLY D 55 102.299 149.133-135.413 0.00 -1.08 \ ATOM 56 CA THR D 56 101.945 152.462-133.604 0.00 -0.15 \ ATOM 57 CA GLY D 57 99.146 151.905-131.089 0.00 -0.89 \ ATOM 58 CA ASN D 58 96.524 154.448-132.167 0.00 -0.82 \ ATOM 59 CA THR D 59 93.014 154.005-130.742 0.00 -0.47 \ ATOM 60 CA LYS D 60 89.831 154.622-132.758 0.00 -1.15 \ ATOM 61 CA TYR D 61 86.601 153.561-131.031 0.00 -0.91 \ ATOM 62 CA SER D 62 82.952 154.571-131.457 0.00 -0.80 \ ATOM 63 CA GLN D 63 81.048 157.271-129.549 0.00 -0.32 \ ATOM 64 CA LYS D 64 78.780 154.587-128.065 0.00 -0.85 \ ATOM 65 CA PHE D 65 81.167 153.227-125.425 0.00 0.15 \ ATOM 66 CA ARG D 66 82.819 156.616-124.841 0.00 -0.15 \ ATOM 67 CA GLY D 67 84.642 156.733-121.515 0.00 0.55 \ ATOM 68 CA ARG D 68 84.637 153.028-120.627 0.00 0.39 \ ATOM 69 CA VAL D 69 86.569 151.255-123.389 0.00 0.43 \ ATOM 70 CA THR D 70 90.310 150.766-123.865 0.00 -0.64 \ ATOM 71 CA PHE D 71 92.607 148.884-126.249 0.00 0.30 \ ATOM 72 CA THR D 72 96.123 147.638-125.452 0.00 0.01 \ ATOM 73 CA ARG D 73 98.679 145.571-127.394 0.00 -0.34 \ ATOM 74 CA ASP D 74 101.845 143.658-126.469 0.00 0.01 \ ATOM 75 CA THR D 75 104.448 143.750-129.263 0.00 -0.47 \ ATOM 76 CA SER D 76 106.679 140.873-128.112 0.00 -0.76 \ ATOM 77 CA ALA D 77 103.735 138.671-127.081 0.00 -0.45 \ ATOM 78 CA THR D 78 101.578 138.920-130.228 0.00 -0.03 \ ATOM 79 CA THR D 79 98.247 139.424-128.422 0.00 -0.55 \ ATOM 80 CA ALA D 80 95.642 142.210-128.546 0.00 -0.48 \ ATOM 81 CA TYR D 81 93.459 143.347-125.632 0.00 -0.56 \ ATOM 82 CA MET D 82 90.132 145.046-124.882 0.00 2.23 \ ATOM 83 CA GLY D 83 88.803 146.658-121.707 0.00 -0.32 \ ATOM 84 CA LEU D 84 85.298 147.645-120.564 0.00 1.00 \ ATOM 85 CA SER D 85 84.411 149.033-117.116 0.00 -0.28 \ ATOM 86 CA SER D 86 80.963 149.466-115.513 0.00 -0.42 \ ATOM 87 CA LEU D 87 79.364 146.375-117.090 0.00 1.49 \ ATOM 88 CA ARG D 88 75.567 146.210-117.378 0.00 -0.46 \ ATOM 89 CA PRO D 89 72.928 143.430-117.823 0.00 -0.43 \ ATOM 90 CA GLU D 90 72.619 144.410-121.496 0.00 0.01 \ ATOM 91 CA ASP D 91 76.265 143.760-122.410 0.00 3.29 \ ATOM 92 CA THR D 92 75.636 140.006-122.739 0.00 0.12 \ ATOM 93 CA ALA D 93 77.130 139.469-126.203 0.00 2.32 \ ATOM 94 CA VAL D 94 79.654 137.466-128.214 0.00 -0.59 \ ATOM 95 CA TYR D 95 82.770 139.543-128.904 0.00 3.38 \ ATOM 96 CA TYR D 96 85.110 138.982-131.864 0.00 2.14 \ ATOM 97 CA CYS D 97 88.483 140.379-132.947 0.00 2.62 \ ATOM 98 CA ALA D 98 88.729 140.736-136.726 0.00 -0.40 \ ATOM 99 CA ARG D 99 91.887 141.656-138.652 0.00 -0.96 \ ATOM 100 CA ASP D 100 92.686 144.670-140.859 0.00 -0.98 \ ATOM 101 CA PRO D 101 93.848 143.658-144.396 0.00 -1.01 \ ATOM 102 CA TYR D 102 95.123 147.207-144.996 0.00 -1.00 \ ATOM 103 CA GLY D 103 96.083 148.778-141.670 0.00 -1.00 \ ATOM 104 CA GLY D 104 93.999 151.891-142.242 0.00 -1.00 \ ATOM 105 CA GLY D 105 91.239 151.517-139.676 0.00 -1.00 \ ATOM 106 CA LYS D 106 88.366 151.482-142.165 0.00 -1.00 \ ATOM 107 CA SER D 107 87.753 148.370-144.287 0.00 -1.00 \ ATOM 108 CA GLU D 108 86.415 144.789-144.353 0.00 -1.00 \ ATOM 109 CA PHE D 109 87.182 141.781-142.124 0.00 -1.00 \ ATOM 110 CA ASP D 110 88.844 138.694-143.632 0.00 -1.00 \ ATOM 111 CA TYR D 111 89.745 136.776-140.456 0.00 -1.00 \ ATOM 112 CA TRP D 112 87.391 136.288-137.497 0.00 -1.00 \ ATOM 113 CA GLY D 113 88.018 134.559-134.172 0.00 -1.00 \ ATOM 114 CA GLN D 114 85.944 132.042-132.204 0.00 -1.00 \ ATOM 115 CA GLY D 115 84.177 134.622-130.050 0.00 -1.00 \ ATOM 116 CA THR D 116 83.867 135.269-126.317 0.00 -1.00 \ ATOM 117 CA LEU D 117 80.455 135.306-124.623 0.00 -1.00 \ ATOM 118 CA VAL D 118 80.652 137.653-121.627 0.00 -1.00 \ ATOM 119 CA THR D 119 77.455 137.319-119.578 0.00 -1.00 \ ATOM 120 CA VAL D 120 76.845 140.009-116.957 0.00 -1.00 \ ATOM 121 CA SER D 121 74.452 138.760-114.258 0.00 -1.00 \ ATOM 122 CA SER D 122 74.417 138.976-110.449 0.00 -1.00 \ """, "e3cm9D1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3cm9D1_csv", state=0, origin=1) cmd.zoom("e3cm9D1_csv", animate=-1)