cmd.read_pdbstr("""\ ATOM 1 N ALA X 2 50.332 -1.088 14.526 1.00 -0.13 \ ATOM 2 CA ALA X 2 48.936 -0.717 14.154 1.00 -0.13 \ ATOM 3 C ALA X 2 48.968 -0.016 12.785 1.00 -0.13 \ ATOM 4 O ALA X 2 50.047 0.278 12.275 1.00 -0.13 \ ATOM 5 CB ALA X 2 48.435 0.245 15.173 1.00 -0.13 \ ATOM 6 N CYS X 3 47.812 0.268 12.213 1.00 1.13 \ ATOM 7 CA CYS X 3 47.733 1.082 11.020 1.00 1.13 \ ATOM 8 C CYS X 3 47.363 2.490 11.408 1.00 1.13 \ ATOM 9 O CYS X 3 46.478 2.702 12.242 1.00 1.13 \ ATOM 10 CB CYS X 3 46.685 0.466 10.088 1.00 1.13 \ ATOM 11 SG CYS X 3 46.526 1.259 8.480 1.00 1.13 \ ATOM 12 N TYR X 4 48.046 3.460 10.794 1.00 -0.83 \ ATOM 13 CA TYR X 4 47.763 4.881 10.987 1.00 -0.83 \ ATOM 14 C TYR X 4 47.473 5.469 9.636 1.00 -0.83 \ ATOM 15 O TYR X 4 48.247 5.301 8.679 1.00 -0.83 \ ATOM 16 CB TYR X 4 48.945 5.606 11.657 1.00 -0.83 \ ATOM 17 CG TYR X 4 49.138 5.100 13.051 1.00 -0.83 \ ATOM 18 CD1 TYR X 4 49.952 4.008 13.297 1.00 -0.83 \ ATOM 19 CD2 TYR X 4 48.404 5.648 14.107 1.00 -0.83 \ ATOM 20 CE1 TYR X 4 50.093 3.491 14.581 1.00 -0.83 \ ATOM 21 CE2 TYR X 4 48.532 5.129 15.411 1.00 -0.83 \ ATOM 22 CZ TYR X 4 49.361 4.056 15.612 1.00 -0.83 \ ATOM 23 OH TYR X 4 49.493 3.555 16.897 1.00 -0.83 \ ATOM 24 N SER X 5 46.395 6.233 9.560 1.00 -0.19 \ ATOM 25 CA SER X 5 45.878 6.735 8.304 1.00 -0.19 \ ATOM 26 C SER X 5 46.847 7.493 7.447 1.00 -0.19 \ ATOM 27 O SER X 5 46.965 7.231 6.237 1.00 -0.19 \ ATOM 28 CB SER X 5 44.647 7.622 8.574 1.00 -0.19 \ ATOM 29 OG SER X 5 45.018 8.874 9.145 1.00 -0.19 \ ATOM 30 N SER X 6 47.533 8.461 8.021 1.00 -0.75 \ ATOM 31 CA SER X 6 48.396 9.307 7.252 0.50 -0.75 \ ATOM 32 C SER X 6 49.532 8.483 6.642 1.00 -0.75 \ ATOM 33 O SER X 6 49.861 8.599 5.442 1.00 -0.75 \ ATOM 34 CB SER X 6 48.916 10.407 8.168 0.50 -0.75 \ ATOM 35 OG SER X 6 49.360 9.852 9.391 0.50 -0.75 \ ATOM 36 N ASP X 7 50.167 7.660 7.479 1.00 -0.41 \ ATOM 37 CA ASP X 7 51.262 6.851 6.991 1.00 -0.41 \ ATOM 38 C ASP X 7 50.799 5.867 5.940 1.00 -0.41 \ ATOM 39 O ASP X 7 51.520 5.616 4.957 1.00 -0.41 \ ATOM 40 CB ASP X 7 51.926 6.104 8.111 1.00 -0.41 \ ATOM 41 CG ASP X 7 52.689 6.997 9.028 1.00 -0.41 \ ATOM 42 OD1 ASP X 7 53.281 8.030 8.624 1.00 -0.41 \ ATOM 43 OD2 ASP X 7 52.749 6.606 10.203 1.00 -0.41 \ ATOM 44 N CYS X 8 49.616 5.278 6.115 1.00 1.57 \ ATOM 45 CA CYS X 8 49.108 4.328 5.147 1.00 1.57 \ ATOM 46 C CYS X 8 48.897 4.992 3.783 1.00 1.57 \ ATOM 47 O CYS X 8 49.336 4.458 2.758 1.00 1.57 \ ATOM 48 CB CYS X 8 47.816 3.727 5.699 1.00 1.57 \ ATOM 49 SG CYS X 8 46.991 2.619 4.496 1.00 1.57 \ ATOM 50 N ARG X 9 48.234 6.152 3.762 1.00 -1.16 \ ATOM 51 CA ARG X 9 48.055 6.837 2.508 0.50 -1.16 \ ATOM 52 C ARG X 9 49.384 7.106 1.815 1.00 -1.16 \ ATOM 53 O ARG X 9 49.533 6.921 0.598 1.00 -1.16 \ ATOM 54 CB ARG X 9 47.346 8.142 2.756 0.50 -1.16 \ ATOM 55 CG ARG X 9 47.135 8.891 1.510 0.50 -1.16 \ ATOM 56 CD ARG X 9 46.412 10.175 1.795 0.50 -1.16 \ ATOM 57 N VAL X 10 50.353 7.606 2.581 1.00 -0.95 \ ATOM 58 CA VAL X 10 51.645 7.994 2.027 1.00 -0.95 \ ATOM 59 C VAL X 10 52.416 6.779 1.516 1.00 -0.95 \ ATOM 60 O VAL X 10 53.049 6.861 0.435 1.00 -0.95 \ ATOM 61 CB VAL X 10 52.411 8.821 3.077 1.00 -0.95 \ ATOM 62 CG1 VAL X 10 53.861 9.072 2.640 1.00 -0.95 \ ATOM 63 CG2 VAL X 10 51.687 10.160 3.290 1.00 -0.95 \ ATOM 64 N LYS X 11 52.383 5.654 2.230 1.00 -0.64 \ ATOM 65 CA LYS X 11 52.975 4.402 1.752 0.50 -0.64 \ ATOM 66 C LYS X 11 52.377 4.006 0.414 1.00 -0.64 \ ATOM 67 O LYS X 11 53.068 3.648 -0.541 1.00 -0.64 \ ATOM 68 CB LYS X 11 52.717 3.273 2.777 0.50 -0.64 \ ATOM 69 CG LYS X 11 53.809 3.296 3.861 0.50 -0.64 \ ATOM 70 CD LYS X 11 53.668 2.069 4.754 0.50 -0.64 \ ATOM 71 CE LYS X 11 52.445 2.194 5.629 0.50 -0.64 \ ATOM 72 NZ LYS X 11 52.393 1.028 6.528 0.50 -0.64 \ ATOM 73 N CYS X 12 51.036 4.020 0.362 1.00 2.04 \ ATOM 74 CA CYS X 12 50.356 3.600 -0.844 1.00 2.04 \ ATOM 75 C CYS X 12 50.722 4.490 -2.038 1.00 2.04 \ ATOM 76 O CYS X 12 51.020 3.983 -3.123 1.00 2.04 \ ATOM 77 CB CYS X 12 48.838 3.613 -0.601 1.00 2.04 \ ATOM 78 SG CYS X 12 48.294 2.300 0.526 1.00 2.04 \ ATOM 79 N VAL X 13 50.692 5.816 -1.842 1.00 -0.58 \ ATOM 80 CA VAL X 13 51.041 6.725 -2.939 1.00 -0.58 \ ATOM 81 C VAL X 13 52.488 6.492 -3.360 1.00 -0.58 \ ATOM 82 O VAL X 13 52.808 6.498 -4.560 1.00 -0.58 \ ATOM 83 CB VAL X 13 50.772 8.189 -2.535 1.00 -0.58 \ ATOM 84 CG1 VAL X 13 51.293 9.156 -3.591 1.00 -0.58 \ ATOM 85 CG2 VAL X 13 49.258 8.393 -2.345 1.00 -0.58 \ ATOM 86 N ALA X 14 53.395 6.290 -2.398 1.00 -0.49 \ ATOM 87 CA ALA X 14 54.805 6.082 -2.730 1.00 -0.49 \ ATOM 88 C ALA X 14 55.001 4.907 -3.665 1.00 -0.49 \ ATOM 89 O ALA X 14 55.914 4.934 -4.498 1.00 -0.49 \ ATOM 90 CB ALA X 14 55.614 5.891 -1.480 1.00 -0.49 \ ATOM 91 N MET X 15 54.172 3.862 -3.517 1.00 -0.86 \ ATOM 92 CA MET X 15 54.271 2.679 -4.363 1.00 -0.86 \ ATOM 93 C MET X 15 53.510 2.798 -5.651 1.00 -0.86 \ ATOM 94 O MET X 15 53.552 1.850 -6.439 1.00 -0.86 \ ATOM 95 CB MET X 15 53.861 1.444 -3.564 1.00 -0.86 \ ATOM 96 CG MET X 15 54.967 1.099 -2.596 1.00 -0.86 \ ATOM 97 SD MET X 15 54.548 -0.293 -1.497 0.50 -0.86 \ ATOM 98 CE MET X 15 52.828 0.083 -1.377 0.50 -0.86 \ ATOM 99 N GLY X 16 52.869 3.931 -5.919 1.00 1.25 \ ATOM 100 CA GLY X 16 52.186 4.173 -7.181 1.00 1.25 \ ATOM 101 C GLY X 16 50.703 3.940 -7.121 1.00 1.25 \ ATOM 102 O GLY X 16 50.043 4.046 -8.162 1.00 1.25 \ ATOM 103 N PHE X 17 50.139 3.657 -5.954 1.00 -0.97 \ ATOM 104 CA PHE X 17 48.703 3.510 -5.794 1.00 -0.97 \ ATOM 105 C PHE X 17 48.077 4.884 -5.570 1.00 -0.97 \ ATOM 106 O PHE X 17 48.774 5.888 -5.341 1.00 -0.97 \ ATOM 107 CB PHE X 17 48.397 2.570 -4.648 1.00 -0.97 \ ATOM 108 CG PHE X 17 48.916 1.176 -4.868 1.00 -0.97 \ ATOM 109 CD1 PHE X 17 49.840 0.636 -4.001 1.00 -0.97 \ ATOM 110 CD2 PHE X 17 48.474 0.384 -5.935 1.00 -0.97 \ ATOM 111 CE1 PHE X 17 50.296 -0.679 -4.185 1.00 -0.97 \ ATOM 112 CE2 PHE X 17 48.937 -0.902 -6.115 1.00 -0.97 \ ATOM 113 CZ PHE X 17 49.852 -1.429 -5.256 1.00 -0.97 \ ATOM 114 N SER X 18 46.750 4.946 -5.616 1.00 -0.93 \ ATOM 115 CA SER X 18 46.064 6.245 -5.536 1.00 -0.93 \ ATOM 116 C SER X 18 46.042 6.839 -4.147 1.00 -0.93 \ ATOM 117 O SER X 18 46.152 8.052 -3.958 1.00 -0.93 \ ATOM 118 CB SER X 18 44.582 6.055 -6.072 1.00 -0.93 \ ATOM 119 OG SER X 18 44.616 5.735 -7.451 1.00 -0.93 \ ATOM 120 N SER X 19 45.807 5.985 -3.161 1.00 -1.04 \ ATOM 121 CA SER X 19 45.680 6.348 -1.740 1.00 -1.04 \ ATOM 122 C SER X 19 45.545 5.051 -0.968 1.00 -1.04 \ ATOM 123 O SER X 19 45.754 3.967 -1.541 1.00 -1.04 \ ATOM 124 CB SER X 19 44.430 7.248 -1.520 1.00 -1.04 \ ATOM 125 OG SER X 19 44.482 7.714 -0.186 1.00 -1.04 \ ATOM 126 N GLY X 20 45.158 5.128 0.298 1.00 0.54 \ ATOM 127 CA GLY X 20 44.861 3.940 1.080 1.00 0.54 \ ATOM 128 C GLY X 20 44.165 4.282 2.354 1.00 0.54 \ ATOM 129 O GLY X 20 44.111 5.448 2.741 1.00 0.54 \ ATOM 130 N LYS X 21 43.639 3.260 3.011 1.00 0.41 \ ATOM 131 CA LYS X 21 42.951 3.441 4.287 0.50 0.41 \ ATOM 132 C LYS X 21 43.198 2.263 5.177 1.00 0.41 \ ATOM 133 O LYS X 21 43.403 1.126 4.730 1.00 0.41 \ ATOM 134 CB LYS X 21 41.412 3.553 4.151 0.50 0.41 \ ATOM 135 CG LYS X 21 40.881 4.732 3.357 0.50 0.41 \ ATOM 136 CD LYS X 21 39.519 5.275 3.875 0.50 0.41 \ ATOM 137 N CYS X 22 43.148 2.534 6.474 1.00 2.04 \ ATOM 138 CA CYS X 22 43.277 1.502 7.508 1.00 2.04 \ ATOM 139 C CYS X 22 41.951 0.777 7.696 1.00 2.04 \ ATOM 140 O CYS X 22 40.926 1.412 8.015 1.00 2.04 \ ATOM 141 CB CYS X 22 43.690 2.111 8.825 1.00 2.04 \ ATOM 142 SG CYS X 22 45.315 2.856 8.819 1.00 2.04 \ ATOM 143 N ILE X 23 41.976 -0.538 7.570 1.00 -0.19 \ ATOM 144 CA ILE X 23 40.800 -1.384 7.747 1.00 -0.19 \ ATOM 145 C ILE X 23 41.246 -2.575 8.557 1.00 -0.19 \ ATOM 146 O ILE X 23 42.134 -3.333 8.133 1.00 -0.19 \ ATOM 147 CB ILE X 23 40.275 -1.886 6.385 1.00 -0.19 \ ATOM 148 CG1 ILE X 23 39.868 -0.716 5.492 1.00 -0.19 \ ATOM 149 CG2 ILE X 23 39.149 -2.915 6.595 1.00 -0.19 \ ATOM 150 CD1 ILE X 23 38.691 0.068 5.993 1.00 -0.19 \ ATOM 151 N ASN X 24 40.675 -2.771 9.749 1.00 1.13 \ ATOM 152 CA ASN X 24 40.964 -3.956 10.540 1.00 1.13 \ ATOM 153 C ASN X 24 42.472 -4.157 10.747 1.00 1.13 \ ATOM 154 O ASN X 24 42.984 -5.259 10.613 1.00 1.13 \ ATOM 155 CB ASN X 24 40.327 -5.190 9.907 1.00 1.13 \ ATOM 156 CG ASN X 24 40.277 -6.363 10.852 1.00 1.13 \ ATOM 157 OD1 ASN X 24 40.395 -6.209 12.100 1.00 1.13 \ ATOM 158 ND2 ASN X 24 40.134 -7.559 10.281 1.00 1.13 \ ATOM 159 N SER X 25 43.161 -3.051 11.084 1.00 -0.19 \ ATOM 160 CA SER X 25 44.607 -3.067 11.337 0.33 -0.19 \ ATOM 161 C SER X 25 45.474 -3.213 10.115 1.00 -0.19 \ ATOM 162 O SER X 25 46.676 -3.353 10.265 1.00 -0.19 \ ATOM 163 CB SER X 25 45.013 -4.118 12.371 0.33 -0.19 \ ATOM 164 OG SER X 25 44.541 -3.691 13.615 0.33 -0.19 \ ATOM 165 N LYS X 26 44.893 -3.179 8.920 1.00 -0.84 \ ATOM 166 CA LYS X 26 45.642 -3.384 7.674 1.00 -0.84 \ ATOM 167 C LYS X 26 45.613 -2.085 6.871 1.00 -0.84 \ ATOM 168 O LYS X 26 44.556 -1.458 6.720 1.00 -0.84 \ ATOM 169 CB LYS X 26 45.026 -4.509 6.860 1.00 -0.84 \ ATOM 170 CG LYS X 26 45.068 -5.824 7.616 1.00 -0.84 \ ATOM 171 CD LYS X 26 44.351 -6.918 6.867 1.00 -0.84 \ ATOM 172 CE LYS X 26 44.150 -8.136 7.739 1.00 -0.84 \ ATOM 173 N CYS X 27 46.748 -1.716 6.288 1.00 1.57 \ ATOM 174 CA CYS X 27 46.799 -0.602 5.353 1.00 1.57 \ ATOM 175 C CYS X 27 46.461 -1.141 3.973 1.00 1.57 \ ATOM 176 O CYS X 27 47.262 -1.866 3.363 1.00 1.57 \ ATOM 177 CB CYS X 27 48.203 -0.002 5.378 1.00 1.57 \ ATOM 178 SG CYS X 27 48.432 1.223 4.077 1.00 1.57 \ ATOM 179 N LYS X 28 45.263 -0.799 3.506 1.00 -0.46 \ ATOM 180 CA LYS X 28 44.718 -1.289 2.246 1.00 -0.46 \ ATOM 181 C LYS X 28 44.735 -0.176 1.222 1.00 -0.46 \ ATOM 182 O LYS X 28 44.012 0.835 1.355 1.00 -0.46 \ ATOM 183 CB LYS X 28 43.293 -1.844 2.458 1.00 -0.46 \ ATOM 184 CG LYS X 28 43.242 -2.978 3.470 1.00 -0.46 \ ATOM 185 CD LYS X 28 41.928 -3.739 3.333 1.00 -0.46 \ ATOM 186 CE LYS X 28 41.784 -4.863 4.334 1.00 -0.46 \ ATOM 187 NZ LYS X 28 40.572 -5.709 3.945 1.00 -0.46 \ ATOM 188 N CYS X 29 45.544 -0.338 0.169 1.00 2.04 \ ATOM 189 CA CYS X 29 45.619 0.709 -0.838 1.00 2.04 \ ATOM 190 C CYS X 29 44.463 0.652 -1.805 1.00 2.04 \ ATOM 191 O CYS X 29 43.954 -0.438 -2.151 1.00 2.04 \ ATOM 192 CB CYS X 29 46.908 0.648 -1.653 1.00 2.04 \ ATOM 193 SG CYS X 29 48.428 0.642 -0.656 1.00 2.04 \ ATOM 194 N TYR X 30 44.065 1.816 -2.303 1.00 0.26 \ ATOM 195 CA TYR X 30 43.226 1.949 -3.489 1.00 0.26 \ ATOM 196 C TYR X 30 44.129 1.920 -4.699 1.00 0.26 \ ATOM 197 O TYR X 30 45.168 2.637 -4.711 1.00 0.26 \ ATOM 198 CB TYR X 30 42.488 3.286 -3.476 1.00 0.26 \ ATOM 199 CG TYR X 30 41.520 3.468 -2.342 1.00 0.26 \ ATOM 200 CD1 TYR X 30 41.813 4.292 -1.273 1.00 0.26 \ ATOM 201 CD2 TYR X 30 40.260 2.875 -2.356 1.00 0.26 \ ATOM 202 CE1 TYR X 30 40.926 4.544 -0.243 1.00 0.26 \ ATOM 203 CE2 TYR X 30 39.325 3.149 -1.326 1.00 0.26 \ ATOM 204 CZ TYR X 30 39.685 3.989 -0.287 1.00 0.26 \ ATOM 205 OH TYR X 30 38.810 4.288 0.742 1.00 0.26 \ ATOM 206 N LYS X 31 43.806 1.153 -5.727 1.00 -0.56 \ ATOM 207 CA LYS X 31 44.613 1.095 -6.919 1.00 -0.56 \ ATOM 208 C LYS X 31 44.849 2.460 -7.517 1.00 -0.56 \ ATOM 209 O LYS X 31 43.887 3.260 -7.571 1.00 -0.56 \ ATOM 210 CB LYS X 31 43.972 0.145 -7.936 1.00 -0.56 \ ATOM 211 CG LYS X 31 44.730 0.010 -9.259 1.00 -0.56 \ ATOM 212 CD LYS X 31 46.173 -0.524 -9.113 1.00 -0.56 \ ATOM 213 CE LYS X 31 46.802 -0.733 -10.462 1.00 -0.56 \ ATOM 214 NZ LYS X 31 48.254 -1.115 -10.316 1.00 -0.56 \ ATOM 215 OXT LYS X 31 46.004 2.732 -7.926 1.00 -0.56 \ """, "e3e8yX1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3e8yX1_csv", state=0, origin=1) cmd.zoom("e3e8yX1_csv", animate=-1)