cmd.read_pdbstr("""\ ATOM 1 N CYS B 1 -6.646 21.273 3.818 1.00 -1.00 \ ATOM 2 CA CYS B 1 -6.730 20.536 2.528 1.00 -1.00 \ ATOM 3 C CYS B 1 -7.989 19.746 2.366 1.00 -1.00 \ ATOM 4 O CYS B 1 -8.246 19.288 1.250 1.00 -1.00 \ ATOM 5 CB CYS B 1 -5.563 19.579 2.366 1.00 -1.00 \ ATOM 6 SG CYS B 1 -3.980 20.449 2.347 1.00 -1.00 \ ATOM 7 N GLY B 2 -8.743 19.525 3.449 1.00 -1.00 \ ATOM 8 CA GLY B 2 -9.972 18.732 3.369 1.00 -1.00 \ ATOM 9 C GLY B 2 -9.651 17.244 3.210 1.00 -1.00 \ ATOM 10 O GLY B 2 -8.601 16.763 3.678 1.00 -1.00 \ ATOM 11 N GLY B 3 -10.528 16.536 2.525 1.00 -1.00 \ ATOM 12 CA GLY B 3 -10.323 15.120 2.228 1.00 -1.00 \ ATOM 13 C GLY B 3 -9.082 14.780 1.400 1.00 -1.00 \ ATOM 14 O GLY B 3 -8.556 15.620 0.666 1.00 -1.00 \ ATOM 15 N ALA B 4 -8.599 13.553 1.563 1.00 0.26 \ ATOM 16 CA ALA B 4 -7.415 13.054 0.830 1.00 0.26 \ ATOM 17 C ALA B 4 -7.721 11.850 -0.066 1.00 0.26 \ ATOM 18 O ALA B 4 -6.837 11.287 -0.707 1.00 0.26 \ ATOM 19 CB ALA B 4 -6.297 12.725 1.795 1.00 0.26 \ ATOM 20 N CYS B 5 -8.988 11.464 -0.127 1.00 0.26 \ ATOM 21 CA CYS B 5 -9.349 10.207 -0.777 1.00 0.26 \ ATOM 22 C CYS B 5 -10.212 10.415 -2.012 1.00 0.26 \ ATOM 23 O CYS B 5 -10.813 11.500 -2.227 1.00 0.26 \ ATOM 24 CB CYS B 5 -10.083 9.317 0.203 1.00 0.26 \ ATOM 25 SG CYS B 5 -9.138 9.076 1.767 1.00 0.26 \ ATOM 26 N TYR B 6 -10.316 9.367 -2.824 1.00 0.26 \ ATOM 27 CA TYR B 6 -11.069 9.426 -4.063 1.00 0.26 \ ATOM 28 C TYR B 6 -11.876 8.187 -4.249 1.00 0.26 \ ATOM 29 O TYR B 6 -11.622 7.141 -3.612 1.00 0.26 \ ATOM 30 CB TYR B 6 -10.103 9.548 -5.235 1.00 0.26 \ ATOM 31 CG TYR B 6 -9.082 10.647 -5.105 1.00 0.26 \ ATOM 32 CD1 TYR B 6 -9.368 11.916 -5.561 1.00 0.26 \ ATOM 33 CD2 TYR B 6 -7.828 10.401 -4.567 1.00 0.26 \ ATOM 34 CE1 TYR B 6 -8.429 12.945 -5.455 1.00 0.26 \ ATOM 35 CE2 TYR B 6 -6.865 11.431 -4.465 1.00 0.26 \ ATOM 36 CZ TYR B 6 -7.183 12.690 -4.908 1.00 0.26 \ ATOM 37 OH TYR B 6 -6.266 13.725 -4.822 1.00 0.26 \ ATOM 38 N CYS B 7 -12.846 8.289 -5.158 1.00 0.26 \ ATOM 39 CA CYS B 7 -13.612 7.132 -5.631 1.00 0.26 \ ATOM 40 C CYS B 7 -13.207 6.864 -7.083 1.00 0.26 \ ATOM 41 O CYS B 7 -13.251 7.766 -7.933 1.00 0.26 \ ATOM 42 CB CYS B 7 -15.117 7.453 -5.629 1.00 0.26 \ ATOM 43 SG CYS B 7 -15.675 7.800 -3.972 1.00 0.26 \ ATOM 44 N ARG B 8 -12.792 5.641 -7.339 1.00 0.26 \ ATOM 45 CA ARG B 8 -12.256 5.270 -8.655 1.00 0.26 \ ATOM 46 C ARG B 8 -12.865 3.985 -9.158 1.00 0.26 \ ATOM 47 O ARG B 8 -13.156 3.086 -8.383 1.00 0.26 \ ATOM 48 CB ARG B 8 -10.708 5.133 -8.599 1.00 0.26 \ ATOM 49 CG ARG B 8 -9.989 6.329 -8.073 1.00 0.26 \ ATOM 50 CD ARG B 8 -8.565 6.178 -8.436 1.00 0.26 \ ATOM 51 NE ARG B 8 -7.729 7.166 -7.727 1.00 0.26 \ ATOM 52 CZ ARG B 8 -7.570 8.425 -8.096 1.00 0.26 \ ATOM 53 NH1 ARG B 8 -8.222 8.884 -9.169 1.00 0.26 \ ATOM 54 NH2 ARG B 8 -6.753 9.216 -7.399 1.00 0.26 \ ATOM 55 N ILE B 9 -13.034 3.932 -10.493 1.00 0.26 \ ATOM 56 CA ILE B 9 -13.411 2.726 -11.207 1.00 0.26 \ ATOM 57 C ILE B 9 -12.284 2.470 -12.265 1.00 0.26 \ ATOM 58 O ILE B 9 -11.992 3.342 -13.072 1.00 0.26 \ ATOM 59 CB ILE B 9 -14.799 2.900 -11.877 1.00 0.26 \ ATOM 60 CG1 ILE B 9 -15.908 2.890 -10.777 1.00 0.26 \ ATOM 61 CG2 ILE B 9 -14.981 1.835 -12.948 1.00 0.26 \ ATOM 62 CD1 ILE B 9 -17.282 3.383 -11.334 1.00 0.26 \ ATOM 63 N PRO B 10 -11.696 1.260 -12.297 1.00 0.26 \ ATOM 64 CA PRO B 10 -12.161 0.068 -11.530 1.00 0.26 \ ATOM 65 C PRO B 10 -11.470 -0.147 -10.200 1.00 0.26 \ ATOM 66 O PRO B 10 -11.954 -0.978 -9.388 1.00 0.26 \ ATOM 67 CB PRO B 10 -11.808 -1.094 -12.465 1.00 0.26 \ ATOM 68 CG PRO B 10 -10.556 -0.643 -13.159 1.00 0.26 \ ATOM 69 CD PRO B 10 -10.691 0.895 -13.316 1.00 0.26 \ ATOM 70 N ALA B 11 -10.320 0.525 -10.050 1.00 0.26 \ ATOM 71 CA ALA B 11 -9.377 0.242 -8.956 1.00 0.26 \ ATOM 72 C ALA B 11 -8.607 1.519 -8.549 1.00 0.26 \ ATOM 73 O ALA B 11 -8.699 2.532 -9.234 1.00 0.26 \ ATOM 74 CB ALA B 11 -8.392 -0.812 -9.358 1.00 0.26 \ ATOM 75 N CYS B 12 -7.888 1.477 -7.430 1.00 0.26 \ ATOM 76 CA CYS B 12 -7.087 2.606 -6.993 1.00 0.26 \ ATOM 77 C CYS B 12 -5.920 2.799 -7.937 1.00 0.26 \ ATOM 78 O CYS B 12 -5.563 1.889 -8.689 1.00 0.26 \ ATOM 79 CB CYS B 12 -6.580 2.370 -5.568 1.00 0.26 \ ATOM 80 SG CYS B 12 -7.877 2.241 -4.370 1.00 0.26 \ ATOM 81 N ILE B 13 -5.313 3.976 -7.849 1.00 -3.68 \ ATOM 82 CA ILE B 13 -4.084 4.251 -8.622 1.00 -3.68 \ ATOM 83 C ILE B 13 -2.792 3.967 -7.794 1.00 -3.68 \ ATOM 84 O ILE B 13 -2.878 3.631 -6.656 1.00 -3.68 \ ATOM 85 CB ILE B 13 -4.014 5.704 -9.230 1.00 -3.68 \ ATOM 86 CG1 ILE B 13 -4.012 6.792 -8.136 1.00 -3.68 \ ATOM 87 CG2 ILE B 13 -5.162 5.898 -10.181 1.00 -3.68 \ ATOM 88 CD1 ILE B 13 -3.594 8.225 -8.588 1.00 -3.68 \ ATOM 89 N ALA B 14 -1.616 4.192 -8.360 1.00 0.26 \ ATOM 90 CA ALA B 14 -0.387 4.032 -7.619 1.00 0.26 \ ATOM 91 C ALA B 14 -0.331 5.033 -6.471 1.00 0.26 \ ATOM 92 O ALA B 14 -0.711 6.225 -6.652 1.00 0.26 \ ATOM 93 CB ALA B 14 0.813 4.202 -8.566 1.00 0.26 \ ATOM 94 N GLY B 15 0.131 4.548 -5.301 1.00 0.26 \ ATOM 95 CA GLY B 15 0.293 5.432 -4.154 1.00 0.26 \ ATOM 96 C GLY B 15 -0.847 5.394 -3.198 1.00 0.26 \ ATOM 97 O GLY B 15 -0.790 6.011 -2.065 1.00 0.26 \ ATOM 98 N GLU B 16 -1.868 4.636 -3.612 1.00 0.26 \ ATOM 99 CA GLU B 16 -3.094 4.532 -2.880 1.00 0.26 \ ATOM 100 C GLU B 16 -3.314 3.121 -2.394 1.00 0.26 \ ATOM 101 O GLU B 16 -2.846 2.112 -2.963 1.00 0.26 \ ATOM 102 CB GLU B 16 -4.274 4.963 -3.751 1.00 0.26 \ ATOM 103 CG GLU B 16 -4.154 6.439 -4.222 1.00 0.26 \ ATOM 104 CD GLU B 16 -5.302 6.867 -5.124 1.00 0.26 \ ATOM 105 OE1 GLU B 16 -6.037 6.009 -5.629 1.00 0.26 \ ATOM 106 OE2 GLU B 16 -5.469 8.079 -5.334 1.00 0.26 \ ATOM 107 N ARG B 17 -4.071 3.084 -1.326 1.00 -3.68 \ ATOM 108 CA ARG B 17 -4.590 1.871 -0.807 1.00 -3.68 \ ATOM 109 C ARG B 17 -6.126 1.992 -0.857 1.00 -3.68 \ ATOM 110 O ARG B 17 -6.716 3.082 -0.625 1.00 -3.68 \ ATOM 111 CB ARG B 17 -4.109 1.689 0.644 1.00 -3.68 \ ATOM 112 CG ARG B 17 -4.580 0.459 1.241 1.00 -3.68 \ ATOM 113 CD ARG B 17 -3.643 -0.691 0.956 1.00 -3.68 \ ATOM 114 NE ARG B 17 -3.947 -1.851 1.808 1.00 -3.68 \ ATOM 115 CZ ARG B 17 -3.360 -2.167 2.966 1.00 -3.68 \ ATOM 116 NH1 ARG B 17 -2.368 -1.426 3.515 1.00 -3.68 \ ATOM 117 NH2 ARG B 17 -3.786 -3.252 3.594 1.00 -3.68 \ ATOM 118 N ARG B 18 -6.761 0.865 -1.125 1.00 0.26 \ ATOM 119 CA ARG B 18 -8.235 0.790 -1.033 1.00 0.26 \ ATOM 120 C ARG B 18 -8.695 0.646 0.425 1.00 0.26 \ ATOM 121 O ARG B 18 -8.280 -0.289 1.143 1.00 0.26 \ ATOM 122 CB ARG B 18 -8.785 -0.360 -1.905 1.00 0.26 \ ATOM 123 CG ARG B 18 -10.304 -0.316 -1.973 1.00 0.26 \ ATOM 124 CD ARG B 18 -10.863 -1.198 -3.057 1.00 0.26 \ ATOM 125 NE ARG B 18 -12.305 -1.167 -2.961 1.00 0.26 \ ATOM 126 CZ ARG B 18 -13.167 -1.639 -3.841 1.00 0.26 \ ATOM 127 NH1 ARG B 18 -12.724 -2.277 -4.933 1.00 0.26 \ ATOM 128 NH2 ARG B 18 -14.459 -1.517 -3.594 1.00 0.26 \ ATOM 129 N TYR B 19 -9.557 1.573 0.851 1.00 0.26 \ ATOM 130 CA TYR B 19 -10.103 1.550 2.238 1.00 0.26 \ ATOM 131 C TYR B 19 -11.544 1.026 2.363 1.00 0.26 \ ATOM 132 O TYR B 19 -11.961 0.581 3.464 1.00 0.26 \ ATOM 133 CB TYR B 19 -9.897 2.924 2.897 1.00 0.26 \ ATOM 134 CG TYR B 19 -8.437 3.086 3.301 1.00 0.26 \ ATOM 135 CD1 TYR B 19 -7.982 2.600 4.515 1.00 0.26 \ ATOM 136 CD2 TYR B 19 -7.515 3.689 2.448 1.00 0.26 \ ATOM 137 CE1 TYR B 19 -6.631 2.755 4.878 1.00 0.26 \ ATOM 138 CE2 TYR B 19 -6.178 3.808 2.769 1.00 0.26 \ ATOM 139 CZ TYR B 19 -5.745 3.336 3.977 1.00 0.26 \ ATOM 140 OH TYR B 19 -4.403 3.470 4.311 1.00 0.26 \ ATOM 141 N GLY B 20 -12.223 0.928 1.249 1.00 0.26 \ ATOM 142 CA GLY B 20 -13.651 0.591 1.229 1.00 0.26 \ ATOM 143 C GLY B 20 -14.230 0.851 -0.118 1.00 0.26 \ ATOM 144 O GLY B 20 -13.537 0.729 -1.128 1.00 0.26 \ ATOM 145 N THR B 21 -15.505 1.212 -0.101 1.00 0.26 \ ATOM 146 CA THR B 21 -16.315 1.368 -1.318 1.00 0.26 \ ATOM 147 C THR B 21 -17.104 2.645 -1.237 1.00 0.26 \ ATOM 148 O THR B 21 -17.635 2.992 -0.199 1.00 0.26 \ ATOM 149 CB THR B 21 -17.236 0.148 -1.472 1.00 0.26 \ ATOM 150 OG1 THR B 21 -16.394 -1.003 -1.543 1.00 0.26 \ ATOM 151 CG2 THR B 21 -18.141 0.209 -2.739 1.00 0.26 \ ATOM 152 N CYS B 22 -17.252 3.312 -2.374 1.00 0.26 \ ATOM 153 CA CYS B 22 -18.137 4.474 -2.440 1.00 0.26 \ ATOM 154 C CYS B 22 -19.383 4.067 -3.186 1.00 0.26 \ ATOM 155 O CYS B 22 -19.313 3.320 -4.178 1.00 0.26 \ ATOM 156 CB CYS B 22 -17.548 5.569 -3.314 1.00 0.26 \ ATOM 157 SG CYS B 22 -15.865 5.978 -3.046 1.00 0.26 \ ATOM 158 N ILE B 23 -20.488 4.627 -2.743 1.00 0.26 \ ATOM 159 CA ILE B 23 -21.711 4.632 -3.470 1.00 0.26 \ ATOM 160 C ILE B 23 -21.917 6.061 -3.980 1.00 0.26 \ ATOM 161 O ILE B 23 -22.115 6.975 -3.189 1.00 0.26 \ ATOM 162 CB ILE B 23 -22.889 4.194 -2.574 1.00 0.26 \ ATOM 163 CG1 ILE B 23 -22.592 2.829 -1.961 1.00 0.26 \ ATOM 164 CG2 ILE B 23 -24.157 4.206 -3.412 1.00 0.26 \ ATOM 165 CD1 ILE B 23 -23.523 2.458 -0.831 1.00 0.26 \ ATOM 166 N TYR B 24 -21.794 6.220 -5.294 1.00 0.26 \ ATOM 167 CA TYR B 24 -21.855 7.561 -5.888 1.00 0.26 \ ATOM 168 C TYR B 24 -22.590 7.498 -7.223 1.00 0.26 \ ATOM 169 O TYR B 24 -22.186 6.755 -8.099 1.00 0.26 \ ATOM 170 CB TYR B 24 -20.415 8.138 -6.053 1.00 0.26 \ ATOM 171 CG TYR B 24 -20.376 9.472 -6.808 1.00 0.26 \ ATOM 172 CD1 TYR B 24 -20.909 10.618 -6.259 1.00 0.26 \ ATOM 173 CD2 TYR B 24 -19.874 9.532 -8.108 1.00 0.26 \ ATOM 174 CE1 TYR B 24 -20.928 11.808 -6.929 1.00 0.26 \ ATOM 175 CE2 TYR B 24 -19.882 10.750 -8.814 1.00 0.26 \ ATOM 176 CZ TYR B 24 -20.401 11.886 -8.204 1.00 0.26 \ ATOM 177 OH TYR B 24 -20.428 13.120 -8.840 1.00 0.26 \ ATOM 178 N GLN B 25 -23.647 8.289 -7.333 1.00 0.26 \ ATOM 179 CA GLN B 25 -24.430 8.372 -8.560 1.00 0.26 \ ATOM 180 C GLN B 25 -24.892 7.000 -9.061 1.00 0.26 \ ATOM 181 O GLN B 25 -24.917 6.736 -10.265 1.00 0.26 \ ATOM 182 CB GLN B 25 -23.649 9.130 -9.641 1.00 0.26 \ ATOM 183 CG GLN B 25 -23.584 10.613 -9.386 1.00 0.26 \ ATOM 184 CD GLN B 25 -24.936 11.284 -9.395 1.00 0.26 \ ATOM 185 OE1 GLN B 25 -25.778 11.002 -10.232 1.00 0.26 \ ATOM 186 NE2 GLN B 25 -25.155 12.179 -8.444 1.00 0.26 \ ATOM 187 N GLY B 26 -25.281 6.155 -8.085 1.00 0.26 \ ATOM 188 CA GLY B 26 -25.968 4.945 -8.457 1.00 0.26 \ ATOM 189 C GLY B 26 -24.986 3.869 -8.789 1.00 0.26 \ ATOM 190 O GLY B 26 -25.416 2.811 -9.222 1.00 0.26 \ ATOM 191 N ARG B 27 -23.670 4.125 -8.638 1.00 0.26 \ ATOM 192 CA ARG B 27 -22.817 2.984 -8.716 1.00 0.26 \ ATOM 193 C ARG B 27 -21.767 2.909 -7.685 1.00 0.26 \ ATOM 194 O ARG B 27 -21.653 3.783 -6.848 1.00 0.26 \ ATOM 195 CB ARG B 27 -22.166 2.838 -9.974 1.00 0.26 \ ATOM 196 CG ARG B 27 -21.562 3.985 -10.454 1.00 0.26 \ ATOM 197 CD ARG B 27 -22.134 3.903 -11.906 1.00 0.26 \ ATOM 198 NE ARG B 27 -23.147 4.946 -12.088 1.00 0.26 \ ATOM 199 CZ ARG B 27 -23.640 5.289 -13.271 1.00 0.26 \ ATOM 200 NH1 ARG B 27 -23.225 4.639 -14.358 1.00 0.26 \ ATOM 201 NH2 ARG B 27 -24.561 6.276 -13.384 1.00 0.26 \ ATOM 202 N LEU B 28 -21.013 1.794 -7.795 1.00 0.26 \ ATOM 203 CA LEU B 28 -19.994 1.412 -6.829 1.00 0.26 \ ATOM 204 C LEU B 28 -18.615 1.730 -7.340 1.00 0.26 \ ATOM 205 O LEU B 28 -18.288 1.450 -8.477 1.00 0.26 \ ATOM 206 CB LEU B 28 -20.079 -0.076 -6.490 1.00 0.26 \ ATOM 207 CG LEU B 28 -21.362 -0.581 -5.834 1.00 0.26 \ ATOM 208 CD1 LEU B 28 -21.324 -2.091 -5.831 1.00 0.26 \ ATOM 209 CD2 LEU B 28 -21.516 -0.095 -4.415 1.00 0.26 \ ATOM 210 N TRP B 29 -17.787 2.229 -6.431 1.00 0.26 \ ATOM 211 CA TRP B 29 -16.433 2.666 -6.744 1.00 0.26 \ ATOM 212 C TRP B 29 -15.508 2.195 -5.632 1.00 0.26 \ ATOM 213 O TRP B 29 -15.923 2.012 -4.479 1.00 0.26 \ ATOM 214 CB TRP B 29 -16.336 4.200 -6.792 1.00 0.26 \ ATOM 215 CG TRP B 29 -17.371 4.898 -7.586 1.00 0.26 \ ATOM 216 CD1 TRP B 29 -18.707 4.909 -7.367 1.00 0.26 \ ATOM 217 CD2 TRP B 29 -17.148 5.745 -8.751 1.00 0.26 \ ATOM 218 NE1 TRP B 29 -19.351 5.665 -8.322 1.00 0.26 \ ATOM 219 CE2 TRP B 29 -18.410 6.199 -9.180 1.00 0.26 \ ATOM 220 CE3 TRP B 29 -16.004 6.169 -9.454 1.00 0.26 \ ATOM 221 CZ2 TRP B 29 -18.570 7.071 -10.296 1.00 0.26 \ ATOM 222 CZ3 TRP B 29 -16.174 6.996 -10.609 1.00 0.26 \ ATOM 223 CH2 TRP B 29 -17.439 7.442 -10.999 1.00 0.26 \ ATOM 224 N ALA B 30 -14.222 2.058 -5.953 1.00 0.26 \ ATOM 225 CA ALA B 30 -13.202 1.846 -4.956 1.00 0.26 \ ATOM 226 C ALA B 30 -12.940 3.143 -4.198 1.00 0.26 \ ATOM 227 O ALA B 30 -12.790 4.185 -4.828 1.00 0.26 \ ATOM 228 CB ALA B 30 -11.936 1.393 -5.660 1.00 0.26 \ ATOM 229 N PHE B 31 -12.929 3.094 -2.857 1.00 0.26 \ ATOM 230 CA PHE B 31 -12.619 4.277 -2.011 1.00 0.26 \ ATOM 231 C PHE B 31 -11.111 4.143 -1.704 1.00 0.26 \ ATOM 232 O PHE B 31 -10.682 3.174 -1.072 1.00 0.26 \ ATOM 233 CB PHE B 31 -13.445 4.262 -0.722 1.00 0.26 \ ATOM 234 CG PHE B 31 -13.150 5.421 0.160 1.00 0.26 \ ATOM 235 CD1 PHE B 31 -13.615 6.683 -0.191 1.00 0.26 \ ATOM 236 CD2 PHE B 31 -12.442 5.271 1.343 1.00 0.26 \ ATOM 237 CE1 PHE B 31 -13.365 7.775 0.634 1.00 0.26 \ ATOM 238 CE2 PHE B 31 -12.218 6.360 2.172 1.00 0.26 \ ATOM 239 CZ PHE B 31 -12.666 7.606 1.807 1.00 0.26 \ ATOM 240 N CYS B 32 -10.335 5.099 -2.216 1.00 0.26 \ ATOM 241 CA CYS B 32 -8.865 5.053 -2.289 1.00 0.26 \ ATOM 242 C CYS B 32 -8.245 6.235 -1.604 1.00 0.26 \ ATOM 243 O CYS B 32 -8.669 7.359 -1.832 1.00 0.26 \ ATOM 244 CB CYS B 32 -8.474 5.133 -3.773 1.00 0.26 \ ATOM 245 SG CYS B 32 -9.163 3.769 -4.778 1.00 0.26 \ ATOM 246 N CYS B 33 -7.192 5.980 -0.829 1.00 0.26 \ ATOM 247 CA CYS B 33 -6.431 7.046 -0.128 1.00 0.26 \ ATOM 248 C CYS B 33 -4.940 6.809 -0.275 1.00 0.26 \ ATOM 249 O CYS B 33 -4.567 5.633 -0.235 1.00 0.26 \ ATOM 250 CB CYS B 33 -6.770 7.076 1.375 1.00 0.26 \ ATOM 251 SG CYS B 33 -8.600 7.094 1.704 1.00 0.26 \ ATOM 252 OXT CYS B 33 -4.099 7.736 -0.335 1.00 0.26 \ """, "e3hj2B1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3hj2B1_csv", state=0, origin=1) cmd.zoom("e3hj2B1_csv", animate=-1)