cmd.read_pdbstr("""\ ATOM 1 CA HIS D 680 56.551 -66.569 13.829 1.00 -0.46 \ ATOM 2 CA GLN D 681 57.811 -64.742 16.971 1.00 -0.54 \ ATOM 3 CA VAL D 682 61.298 -65.956 16.085 1.00 0.49 \ ATOM 4 CA ALA D 683 61.922 -64.104 12.883 1.00 0.84 \ ATOM 5 CA MET D 684 60.575 -61.038 14.712 1.00 -0.37 \ ATOM 6 CA TRP D 685 62.921 -60.225 17.584 1.00 -0.74 \ ATOM 7 CA GLN D 686 65.459 -60.871 14.879 1.00 -0.44 \ ATOM 8 CA LYS D 687 64.346 -58.715 11.985 1.00 -0.22 \ ATOM 9 CA ASN D 688 63.186 -56.034 14.437 1.00 -0.27 \ ATOM 10 CA PHE D 689 66.841 -56.070 15.639 1.00 -0.15 \ ATOM 11 CA LYS D 690 68.060 -55.629 12.059 1.00 -0.70 \ ATOM 12 CA ARG D 691 66.759 -52.042 12.314 1.00 0.65 \ ATOM 13 CA ILE D 692 68.544 -48.868 11.367 1.00 -0.88 \ ATOM 14 CA SER D 693 69.924 -46.948 14.370 1.00 -0.16 \ ATOM 15 CA TYR D 694 69.936 -43.529 12.736 1.00 -0.77 \ ATOM 16 CA ALA D 695 68.071 -41.382 10.420 1.00 0.23 \ ATOM 17 CA LYS D 696 69.790 -38.096 9.744 1.00 -0.99 \ ATOM 18 CA THR D 697 66.450 -37.061 8.950 1.00 -0.56 \ ATOM 19 CA LYS D 698 67.192 -34.565 6.416 1.00 0.56 \ ATOM 20 CA THR D 699 65.600 -31.628 8.082 1.00 -1.00 \ ATOM 21 CA ARG D 700 66.588 -28.559 6.330 1.00 1.42 \ ATOM 22 CA ALA D 701 66.221 -30.143 2.888 1.00 -0.07 \ ATOM 23 CA GLU D 702 66.923 -26.770 1.655 1.00 -0.42 \ ATOM 24 CA VAL D 703 70.194 -25.604 3.217 1.00 -0.67 \ ATOM 25 CA ARG D 704 72.008 -28.848 2.191 1.00 -1.01 \ ATOM 26 CA GLY D 705 73.896 -28.368 -0.943 1.00 -0.23 \ ATOM 27 CA GLY D 706 72.025 -27.861 -4.107 1.00 1.96 \ ATOM 28 CA GLY D 707 73.230 -24.328 -4.852 1.00 0.62 \ ATOM 29 CA ARG D 708 72.539 -20.607 -4.328 1.00 -0.03 \ ATOM 30 CA LYS D 709 71.516 -17.826 -6.774 1.00 1.93 \ ATOM 31 CA PRO D 710 70.543 -19.163 -10.222 1.00 0.10 \ ATOM 32 CA TRP D 711 70.785 -17.776 -13.684 1.00 -0.45 \ ATOM 33 CA PRO D 712 68.167 -14.917 -13.789 1.00 0.18 \ ATOM 34 CA GLN D 713 64.596 -16.049 -14.324 1.00 0.60 \ ATOM 35 CA LYS D 714 62.791 -13.400 -16.357 1.00 -0.83 \ ATOM 36 CA GLY D 715 62.288 -14.500 -19.930 1.00 0.94 \ ATOM 37 CA THR D 716 65.067 -17.055 -20.000 1.00 0.11 \ ATOM 38 CA GLY D 717 65.015 -20.755 -20.874 1.00 0.73 \ ATOM 39 CA ARG D 718 63.845 -22.154 -17.473 1.00 -0.69 \ ATOM 40 CA ALA D 719 60.894 -21.980 -15.025 1.00 1.15 \ ATOM 41 CA ARG D 720 60.563 -19.272 -12.335 1.00 -0.14 \ ATOM 42 CA HIS D 721 62.393 -21.248 -9.831 1.00 -0.88 \ ATOM 43 CA GLY D 722 66.245 -21.365 -10.137 1.00 0.97 \ ATOM 44 CA SER D 723 67.972 -21.663 -6.584 1.00 -0.79 \ ATOM 45 CA ILE D 724 68.449 -25.387 -5.858 1.00 -0.41 \ ATOM 46 CA ARG D 725 67.003 -24.742 -2.217 1.00 -0.60 \ ATOM 47 CA SER D 726 63.770 -23.389 -0.466 1.00 0.70 \ ATOM 48 CA PRO D 727 60.539 -25.326 0.572 1.00 1.32 \ ATOM 49 CA LEU D 728 58.535 -24.340 -2.537 1.00 -0.27 \ ATOM 50 CA TRP D 729 60.868 -25.792 -5.145 1.00 -0.62 \ ATOM 51 CA ARG D 730 61.947 -28.747 -7.293 1.00 -0.52 \ ATOM 52 CA GLY D 731 63.657 -30.669 -4.493 1.00 0.97 \ ATOM 53 CA GLY D 732 66.318 -28.617 -2.726 1.00 3.43 \ ATOM 54 CA GLY D 733 65.099 -30.738 -0.556 1.00 -0.05 \ ATOM 55 CA VAL D 734 63.130 -33.393 0.659 1.00 -0.44 \ ATOM 56 CA ALA D 735 61.176 -31.932 3.740 1.00 0.58 \ ATOM 57 CA HIS D 736 61.844 -30.028 7.015 1.00 0.16 \ ATOM 58 CA GLY D 737 62.773 -33.302 8.982 1.00 2.44 \ ATOM 59 CA PRO D 738 61.551 -35.790 10.718 1.00 0.77 \ ATOM 60 CA ARG D 739 64.952 -35.276 13.068 1.00 -0.30 \ ATOM 61 CA GLY D 740 67.363 -38.144 14.313 1.00 -0.38 \ ATOM 62 CA PRO D 741 68.229 -41.140 16.924 1.00 -1.00 \ ATOM 63 CA THR D 742 67.028 -44.676 17.992 1.00 -0.24 \ ATOM 64 CA SER D 743 68.333 -47.903 19.546 1.00 -0.70 \ ATOM 65 CA TYR D 744 65.122 -49.916 19.474 1.00 -0.39 \ ATOM 66 CA TYR D 745 64.638 -52.955 21.593 1.00 -1.08 \ ATOM 67 CA TYR D 746 63.146 -56.418 21.388 1.00 -0.91 \ ATOM 68 CA MET D 747 64.242 -59.093 23.826 1.00 -0.73 \ ATOM 69 CA LEU D 748 62.917 -62.625 23.744 1.00 1.39 \ ATOM 70 CA PRO D 749 62.877 -64.771 26.922 1.00 2.25 \ ATOM 71 CA MET D 750 64.564 -68.190 26.905 1.00 -0.70 \ ATOM 72 CA LYS D 751 61.263 -69.869 26.018 1.00 -0.13 \ ATOM 73 CA VAL D 752 61.832 -68.928 22.377 1.00 0.14 \ ATOM 74 CA ARG D 753 65.343 -68.123 20.956 1.00 -0.18 \ ATOM 75 CA ALA D 754 65.634 -71.852 21.554 1.00 -0.81 \ ATOM 76 CA LEU D 755 62.335 -73.741 21.124 1.00 -0.58 \ ATOM 77 CA GLY D 756 62.563 -71.329 18.191 1.00 2.93 \ ATOM 78 CA LEU D 757 66.088 -72.212 17.065 1.00 0.72 \ ATOM 79 CA LYS D 758 64.781 -75.703 17.336 1.00 -0.82 \ ATOM 80 CA VAL D 759 62.041 -75.550 14.709 1.00 -0.90 \ ATOM 81 CA ALA D 760 63.363 -74.858 11.311 1.00 1.68 \ ATOM 82 CA LEU D 761 66.116 -77.196 12.513 1.00 3.04 \ ATOM 83 CA THR D 762 63.503 -79.992 12.640 1.00 -0.54 \ ATOM 84 CA VAL D 763 61.126 -78.885 9.866 1.00 -0.76 \ ATOM 85 CA LYS D 764 64.197 -79.019 7.698 1.00 -0.34 \ ATOM 86 CA LEU D 765 64.791 -82.561 8.979 1.00 -0.73 \ ATOM 87 CA ALA D 766 63.305 -85.362 6.752 1.00 -0.77 \ ATOM 88 CA GLN D 767 63.503 -82.864 3.979 1.00 -0.14 \ ATOM 89 CA ASP D 768 65.801 -81.988 0.990 1.00 0.03 \ ATOM 90 CA ASP D 769 68.814 -81.008 3.120 1.00 -0.61 \ ATOM 91 CA LEU D 770 72.265 -82.352 3.105 1.00 2.34 \ ATOM 92 CA HIS D 771 73.885 -84.827 5.343 1.00 -0.93 \ ATOM 93 CA ILE D 772 77.669 -84.791 4.726 1.00 0.44 \ ATOM 94 CA MET D 773 80.785 -86.136 6.405 1.00 0.27 \ ATOM 95 CA ASP D 774 84.264 -84.606 6.463 1.00 -0.36 \ ATOM 96 CA SER D 775 84.387 -82.127 3.590 1.00 -0.29 \ ATOM 97 CA LEU D 776 87.717 -82.605 1.768 1.00 -0.94 \ ATOM 98 CA GLU D 777 86.686 -81.183 -1.651 1.00 -0.96 \ ATOM 99 CA LEU D 778 88.806 -78.091 -1.451 1.00 -0.79 \ ATOM 100 CA PRO D 779 92.618 -78.449 -1.020 1.00 -0.61 \ ATOM 101 CA THR D 780 92.818 -74.650 -1.011 1.00 -0.96 \ ATOM 102 CA GLY D 781 90.357 -71.798 -1.031 1.00 -0.89 \ ATOM 103 CA ASP D 782 88.920 -72.115 -4.480 1.00 -0.30 \ ATOM 104 CA PRO D 783 85.256 -70.991 -4.517 1.00 0.29 \ ATOM 105 CA GLN D 784 84.959 -72.862 -7.825 1.00 -0.06 \ ATOM 106 CA TYR D 785 85.577 -76.269 -6.204 1.00 -0.86 \ ATOM 107 CA LEU D 786 82.792 -75.670 -3.670 1.00 0.34 \ ATOM 108 CA THR D 787 80.562 -74.890 -6.603 1.00 -0.93 \ ATOM 109 CA GLU D 788 80.983 -78.398 -8.178 1.00 -0.50 \ ATOM 110 CA LEU D 789 79.576 -80.404 -5.215 1.00 -0.64 \ ATOM 111 CA ALA D 790 76.733 -78.116 -5.640 1.00 0.36 \ ATOM 112 CA HIS D 791 74.634 -79.058 -8.746 1.00 -0.68 \ ATOM 113 CA TYR D 792 75.642 -82.613 -8.247 1.00 -0.60 \ ATOM 114 CA ARG D 793 73.225 -82.985 -5.321 1.00 -0.62 \ ATOM 115 CA ARG D 794 70.033 -80.941 -5.442 1.00 -0.92 \ ATOM 116 CA TRP D 795 71.580 -77.422 -5.689 1.00 -1.19 \ ATOM 117 CA GLY D 796 70.611 -74.673 -8.044 1.00 -1.13 \ ATOM 118 CA ASP D 797 70.558 -70.916 -8.109 1.00 -0.70 \ ATOM 119 CA SER D 798 67.052 -71.023 -6.631 1.00 -0.27 \ ATOM 120 CA VAL D 799 68.194 -72.949 -3.580 1.00 -0.68 \ ATOM 121 CA LEU D 800 70.195 -70.270 -1.722 1.00 -0.83 \ ATOM 122 CA LEU D 801 71.735 -72.866 0.586 1.00 1.02 \ ATOM 123 CA VAL D 802 73.540 -72.068 3.767 1.00 1.27 \ ATOM 124 CA ASP D 803 76.862 -73.633 4.865 1.00 -0.62 \ ATOM 125 CA LEU D 804 76.681 -74.569 8.622 1.00 -0.98 \ ATOM 126 CA THR D 805 79.961 -76.222 9.197 1.00 -0.70 \ ATOM 127 CA HIS D 806 82.105 -77.032 12.186 1.00 -1.00 \ ATOM 128 CA GLU D 807 85.731 -77.430 11.221 1.00 -1.00 \ ATOM 129 CA GLU D 808 88.073 -74.461 11.116 1.00 -1.00 \ ATOM 130 CA MET D 809 87.834 -72.350 7.956 1.00 -1.17 \ ATOM 131 CA PRO D 810 87.514 -74.279 4.664 1.00 -0.88 \ ATOM 132 CA GLN D 811 89.252 -71.000 3.525 1.00 -0.98 \ ATOM 133 CA SER D 812 90.620 -68.226 5.750 1.00 -0.96 \ ATOM 134 CA ILE D 813 88.892 -65.635 3.694 1.00 0.25 \ ATOM 135 CA VAL D 814 85.294 -66.855 3.816 1.00 -1.14 \ ATOM 136 CA GLU D 815 85.400 -70.610 3.119 1.00 -0.78 \ ATOM 137 CA ALA D 816 85.301 -70.773 -0.693 1.00 0.40 \ ATOM 138 CA THR D 817 81.788 -69.544 -0.184 1.00 0.60 \ ATOM 139 CA SER D 818 81.356 -65.761 -0.597 1.00 -0.12 \ ATOM 140 CA ARG D 819 81.489 -65.850 -4.401 1.00 -0.20 \ ATOM 141 CA LEU D 820 78.391 -68.058 -4.318 1.00 0.74 \ ATOM 142 CA LYS D 821 75.319 -65.896 -3.835 1.00 -0.73 \ ATOM 143 CA THR D 822 73.614 -69.093 -2.768 1.00 -0.80 \ ATOM 144 CA PHE D 823 76.205 -70.640 -0.529 1.00 0.34 \ ATOM 145 CA ASN D 824 77.094 -68.683 2.657 1.00 -0.59 \ ATOM 146 CA LEU D 825 77.644 -68.402 6.475 1.00 -0.09 \ ATOM 147 CA ILE D 826 79.954 -68.586 9.541 1.00 -0.54 \ ATOM 148 CA PRO D 827 81.213 -71.967 11.102 1.00 -1.14 \ ATOM 149 CA ALA D 828 80.900 -73.191 14.698 1.00 -0.92 \ ATOM 150 CA VAL D 829 78.248 -70.820 15.898 1.00 -1.00 \ ATOM 151 CA GLY D 830 74.748 -72.127 15.347 1.00 -0.66 \ ATOM 152 CA LEU D 831 72.802 -70.628 12.511 1.00 2.02 \ ATOM 153 CA ASN D 832 69.980 -68.685 14.160 1.00 -0.01 \ ATOM 154 CA VAL D 833 66.498 -69.328 12.833 1.00 1.68 \ ATOM 155 CA HIS D 834 66.158 -66.624 10.193 1.00 -0.68 \ ATOM 156 CA SER D 835 69.495 -67.205 8.512 1.00 -0.79 \ ATOM 157 CA MET D 836 68.321 -70.672 7.694 1.00 2.69 \ ATOM 158 CA LEU D 837 64.778 -69.378 6.983 1.00 1.12 \ ATOM 159 CA LYS D 838 66.324 -66.731 4.787 1.00 -1.03 \ ATOM 160 CA HIS D 839 66.279 -69.236 1.949 1.00 -0.38 \ ATOM 161 CA GLN D 840 65.649 -73.016 1.159 1.00 -0.07 \ ATOM 162 CA THR D 841 67.827 -75.542 3.108 1.00 -0.99 \ ATOM 163 CA LEU D 842 71.002 -77.567 2.775 1.00 2.34 \ ATOM 164 CA VAL D 843 74.083 -78.203 4.940 1.00 2.78 \ ATOM 165 CA LEU D 844 75.080 -79.053 8.549 1.00 1.48 \ ATOM 166 CA THR D 845 78.433 -80.768 8.049 1.00 0.10 \ ATOM 167 CA LEU D 846 78.383 -83.456 10.773 1.00 -0.59 \ ATOM 168 CA PRO D 847 77.291 -84.623 13.224 1.00 0.11 \ ATOM 169 CA THR D 848 76.423 -81.196 14.748 1.00 1.25 \ ATOM 170 CA VAL D 849 72.695 -80.778 14.868 1.00 1.63 \ ATOM 171 CA ALA D 850 74.209 -78.463 17.324 1.00 -0.51 \ ATOM 172 CA PHE D 851 77.737 -79.080 18.601 1.00 -1.16 \ ATOM 173 CA LEU D 852 77.311 -81.616 21.418 1.00 2.83 \ ATOM 174 CA GLU D 853 75.241 -79.340 23.713 1.00 -0.35 \ ATOM 175 CA ASP D 854 72.752 -76.609 22.733 1.00 0.30 \ """, "e3iy9D1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3iy9D1_csv", state=0, origin=1) cmd.zoom("e3iy9D1_csv", animate=-1)