cmd.read_pdbstr("""\ ATOM 1 CA ALA H 384 116.405 38.377 239.396 1.00 -1.00 \ ATOM 2 CA ASP H 385 117.225 35.937 242.088 1.00 -1.00 \ ATOM 3 CA HIS H 386 115.937 36.258 245.522 1.00 -1.00 \ ATOM 4 CA ILE H 387 116.460 36.170 249.676 1.00 -1.00 \ ATOM 5 CA VAL H 388 113.638 36.108 252.075 1.00 -1.00 \ ATOM 6 CA SER H 389 111.570 39.227 253.375 1.00 -1.00 \ ATOM 7 CA THR H 390 110.005 41.701 250.691 1.00 -1.00 \ ATOM 8 CA PRO H 391 107.307 44.050 249.005 1.00 -1.00 \ ATOM 9 CA HIS H 392 107.194 46.073 245.500 1.00 -1.00 \ ATOM 10 CA LYS H 393 104.475 46.140 242.761 1.00 -1.00 \ ATOM 11 CA ASN H 394 104.995 45.080 239.162 0.00 -1.00 \ ATOM 12 CA ASP H 395 103.246 46.594 236.142 0.00 -1.00 \ ATOM 13 CA GLN H 396 106.179 47.452 233.877 0.00 -1.00 \ ATOM 14 CA GLU H 397 107.417 47.219 230.559 0.00 -1.00 \ ATOM 15 CA PHE H 398 110.129 45.070 228.916 0.00 -1.00 \ ATOM 16 CA GLN H 399 107.667 42.233 228.163 0.00 -1.14 \ ATOM 17 CA ALA H 400 104.864 44.562 226.979 0.00 1.85 \ ATOM 18 CA ALA H 401 107.185 46.402 224.551 0.00 0.15 \ ATOM 19 CA ILE H 402 108.717 43.134 223.269 0.00 -1.00 \ ATOM 20 CA SER H 403 105.296 41.437 222.989 0.00 0.15 \ ATOM 21 CA LYS H 404 103.709 44.515 221.351 0.00 0.11 \ ATOM 22 CA THR H 405 106.690 45.010 218.997 0.00 -1.14 \ ATOM 23 CA SER H 406 107.120 41.820 217.634 0.00 -1.00 \ ATOM 24 CA TRP H 407 107.327 40.985 220.325 0.00 -1.14 \ ATOM 25 CA SER H 408 104.197 41.320 218.185 0.00 0.12 \ ATOM 26 CA TRP H 409 102.375 38.218 216.940 0.00 -1.14 \ ATOM 27 CA LEU H 410 98.722 39.191 217.565 0.00 -1.00 \ ATOM 28 CA PHE H 411 99.209 42.662 216.033 0.00 0.09 \ ATOM 29 CA ALA H 412 101.169 41.257 213.056 0.00 0.11 \ ATOM 30 CA LEU H 413 98.678 38.386 212.540 0.00 1.85 \ ATOM 31 CA PHE H 414 95.655 40.701 212.949 0.00 -1.14 \ ATOM 32 CA GLY H 415 97.199 43.385 210.700 0.00 0.15 \ ATOM 33 CA GLY H 416 98.304 40.802 208.091 0.00 -1.14 \ ATOM 34 CA ALA H 417 94.937 38.969 208.216 0.00 1.85 \ ATOM 35 CA SER H 418 92.957 42.242 208.120 0.00 -1.14 \ ATOM 36 CA SER H 419 95.153 43.684 205.340 0.00 -1.14 \ ATOM 37 CA LEU H 420 95.080 40.409 203.346 0.00 0.09 \ ATOM 38 CA LEU H 421 91.309 39.962 203.873 0.00 0.09 \ ATOM 39 CA ILE H 422 90.592 43.634 203.077 0.00 0.15 \ ATOM 40 CA ILE H 423 92.925 43.605 200.042 0.00 0.15 \ ATOM 41 CA GLY H 424 91.558 40.241 198.802 0.00 -1.14 \ ATOM 42 CA LEU H 425 87.926 41.287 199.422 0.00 0.15 \ ATOM 43 CA MET H 426 88.473 44.731 197.854 0.00 -1.14 \ ATOM 44 CA ILE H 427 90.401 43.258 194.888 0.00 1.46 \ ATOM 45 CA PHE H 428 87.855 40.428 194.410 0.00 1.85 \ ATOM 46 CA ALA H 429 84.878 42.803 194.800 0.00 0.12 \ ATOM 47 CA CYS H 430 86.464 45.431 192.517 0.00 -1.00 \ ATOM 48 CA SER H 431 87.515 42.803 189.935 0.00 -1.14 \ ATOM 49 CA MET H 432 84.117 41.033 190.086 0.00 0.09 \ ATOM 50 CA MET H 433 82.197 44.340 189.959 0.00 0.13 \ ATOM 51 CA LEU H 434 84.413 45.711 187.157 0.00 0.12 \ ATOM 52 CA THR H 435 84.275 42.416 185.200 0.00 0.12 \ ATOM 53 CA SER H 436 80.498 42.045 185.741 0.00 -1.00 \ ATOM 54 CA THR H 437 79.847 45.723 184.906 0.00 -1.00 \ ATOM 55 CA ARG H 438 82.959 45.817 182.569 0.00 -1.00 \ ATOM 56 CA ARG H 439 81.184 42.902 180.889 0.00 -1.00 \ """, "e3j0fH3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3j0fH3_csv", state=0, origin=1) cmd.zoom("e3j0fH3_csv", animate=-1)