cmd.read_pdbstr("""\ ATOM 1 CA SER D 1 -106.246-125.721-121.596 1.00 -1.00 \ ATOM 2 CA VAL D 2 -104.855-126.204-125.234 1.00 -1.00 \ ATOM 3 CA ALA D 3 -102.498-123.316-125.025 1.00 -1.00 \ ATOM 4 CA LEU D 4 -101.943-121.858-121.486 1.00 -1.00 \ ATOM 5 CA ALA D 5 -101.876-124.728-118.853 1.00 -1.00 \ ATOM 6 CA PRO D 6 -101.537-127.955-120.739 1.00 -1.00 \ ATOM 7 CA HIS D 7 -101.660-131.331-118.952 1.00 -1.00 \ ATOM 8 CA VAL D 8 -98.664-130.726-116.653 1.00 -1.00 \ ATOM 9 CA GLY D 9 -99.661-129.084-113.353 1.00 -1.00 \ ATOM 10 CA MET D 10 -100.953-132.410-112.085 1.00 -1.00 \ ATOM 11 CA GLY D 11 -98.180-134.012-109.987 1.00 -1.00 \ ATOM 12 CA LEU D 12 -99.844-137.393-110.678 1.00 -1.00 \ ATOM 13 CA ASP D 13 -97.164-138.525-113.229 1.00 -1.00 \ ATOM 14 CA THR D 14 -96.383-142.181-114.165 1.00 -1.00 \ ATOM 15 CA ARG D 15 -93.195-143.988-114.444 1.00 -1.00 \ ATOM 16 CA THR D 16 -93.768-144.549-118.120 1.00 -1.00 \ ATOM 17 CA GLN D 17 -92.560-141.520-120.111 1.00 -1.00 \ ATOM 18 CA THR D 18 -94.976-138.708-120.983 1.00 -1.00 \ ATOM 19 CA TRP D 19 -96.155-137.879-124.405 1.00 -1.00 \ ATOM 20 CA MET D 20 -93.871-134.808-125.112 1.00 -1.00 \ ATOM 21 CA SER D 21 -91.526-135.236-122.033 1.00 -1.00 \ ATOM 22 CA ALA D 22 -88.271-133.651-123.437 1.00 -1.00 \ ATOM 23 CA GLU D 23 -90.049-131.384-125.872 1.00 -1.00 \ ATOM 24 CA GLY D 24 -92.813-129.433-124.046 1.00 -1.00 \ ATOM 25 CA ALA D 25 -90.923-128.491-120.910 1.00 -1.00 \ ATOM 26 CA TRP D 26 -88.067-127.122-123.146 1.00 -1.00 \ ATOM 27 CA ARG D 27 -90.495-125.663-125.754 1.00 -1.00 \ ATOM 28 CA GLN D 28 -91.574-123.225-123.021 1.00 -0.17 \ ATOM 29 CA VAL D 29 -88.006-121.868-122.560 1.00 -1.52 \ ATOM 30 CA GLU D 30 -87.327-122.118-126.312 1.00 -1.52 \ ATOM 31 CA LYS D 31 -90.040-119.523-126.981 1.00 2.11 \ ATOM 32 CA VAL D 32 -88.913-117.136-124.142 1.00 -0.17 \ ATOM 33 CA GLU D 33 -85.484-117.183-125.919 1.00 -0.17 \ ATOM 34 CA THR D 34 -86.785-116.897-129.535 1.00 -0.17 \ ATOM 35 CA TRP D 35 -88.751-113.893-128.369 1.00 -0.17 \ ATOM 36 CA ALA D 36 -86.216-112.194-125.992 1.00 -0.17 \ ATOM 37 CA LEU D 37 -83.718-112.648-128.877 1.00 -0.17 \ ATOM 38 CA ARG D 38 -86.255-111.486-131.610 1.00 -0.17 \ ATOM 39 CA HIS D 39 -87.141-108.150-129.915 1.00 -0.17 \ ATOM 40 CA PRO D 40 -84.667-106.053-127.973 1.00 -0.17 \ ATOM 41 CA GLY D 41 -87.192-103.331-126.928 1.00 -0.17 \ ATOM 42 CA PHE D 42 -88.820-105.036-124.027 1.00 -0.17 \ ATOM 43 CA THR D 43 -85.275-105.462-122.572 1.00 -0.17 \ ATOM 44 CA ILE D 44 -84.890-101.647-122.627 1.00 -1.52 \ ATOM 45 CA LEU D 45 -88.350-101.246-120.881 1.00 -1.52 \ ATOM 46 CA ALA D 46 -87.568-103.847-118.320 1.00 -0.17 \ ATOM 47 CA LEU D 47 -83.978-102.574-117.315 1.00 -0.17 \ ATOM 48 CA PHE D 48 -85.579 -99.096-116.891 1.00 -0.17 \ ATOM 49 CA LEU D 49 -88.544-100.083-114.571 1.00 -0.17 \ ATOM 50 CA ALA D 50 -85.820-102.226-112.851 1.00 2.11 \ ATOM 51 CA HIS D 51 -83.437 -99.194-112.452 1.00 -0.17 \ ATOM 52 CA TYR D 52 -86.208 -97.071-111.016 1.00 -0.03 \ ATOM 53 CA ILE D 53 -87.377 -99.440-108.161 1.00 -0.17 \ ATOM 54 CA GLY D 54 -85.674-101.094-105.178 1.00 -0.17 \ ATOM 55 CA THR D 55 -82.190-100.164-104.373 1.00 -0.17 \ ATOM 56 CA SER D 56 -81.229-103.590-103.106 1.00 2.11 \ ATOM 57 CA LEU D 57 -79.743-104.970-106.317 1.00 -1.52 \ ATOM 58 CA THR D 58 -81.357-108.402-106.558 1.00 2.11 \ ATOM 59 CA GLN D 59 -84.793-106.625-106.480 1.00 2.11 \ ATOM 60 CA LYS D 60 -84.079-104.886-109.837 1.00 -0.17 \ ATOM 61 CA VAL D 61 -82.515-108.159-111.318 1.00 -1.52 \ ATOM 62 CA VAL D 62 -85.626-110.301-110.184 1.00 -0.03 \ ATOM 63 CA ILE D 63 -88.237-107.940-111.762 1.00 2.11 \ ATOM 64 CA PHE D 64 -86.113-107.714-114.926 1.00 -0.17 \ ATOM 65 CA ILE D 65 -86.104-111.500-115.435 1.00 -0.17 \ ATOM 66 CA LEU D 66 -89.720-111.676-114.431 1.00 -0.17 \ ATOM 67 CA LEU D 67 -90.915-108.904-116.846 1.00 -0.17 \ ATOM 68 CA MET D 68 -88.808-110.503-119.692 1.00 -0.17 \ ATOM 69 CA LEU D 69 -90.174-113.923-118.988 1.00 2.11 \ ATOM 70 CA VAL D 70 -93.961-112.952-119.109 1.00 -0.17 \ ATOM 71 CA THR D 71 -94.017-111.769-122.829 1.00 -0.17 \ ATOM 72 CA PRO D 72 -97.328-112.637-124.419 1.00 -0.17 \ """, "e3j6sD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3j6sD1_csv", state=0, origin=1) cmd.zoom("e3j6sD1_csv", animate=-1)