cmd.read_pdbstr("""\ ATOM 1 N MET 9 1 167.803 143.703 210.736 1.00 -1.00 \ ATOM 2 CA MET 9 1 168.471 144.681 211.646 1.00 -1.00 \ ATOM 3 C MET 9 1 167.504 145.281 212.686 1.00 -1.00 \ ATOM 4 O MET 9 1 166.279 145.240 212.510 1.00 -1.00 \ ATOM 5 CB MET 9 1 169.123 145.801 210.823 1.00 -1.00 \ ATOM 6 CG MET 9 1 168.194 146.507 209.836 1.00 -1.00 \ ATOM 7 SD MET 9 1 169.007 147.888 208.993 1.00 -1.00 \ ATOM 8 CE MET 9 1 168.740 149.229 210.176 1.00 -1.00 \ ATOM 9 N ARG 9 2 168.054 145.837 213.768 1.00 0.39 \ ATOM 10 CA ARG 9 2 167.224 146.418 214.828 1.00 0.39 \ ATOM 11 C ARG 9 2 166.431 147.645 214.364 1.00 0.39 \ ATOM 12 O ARG 9 2 166.946 148.497 213.631 1.00 0.39 \ ATOM 13 CB ARG 9 2 168.078 146.791 216.049 1.00 0.39 \ ATOM 14 CG ARG 9 2 167.239 147.128 217.279 1.00 0.39 \ ATOM 15 CD ARG 9 2 168.080 147.537 218.480 1.00 0.39 \ ATOM 16 NE ARG 9 2 167.247 147.703 219.676 1.00 0.39 \ ATOM 17 CZ ARG 9 2 167.685 148.131 220.859 1.00 0.39 \ ATOM 18 NH1 ARG 9 2 168.963 148.444 221.023 1.00 0.39 \ ATOM 19 NH2 ARG 9 2 166.841 148.248 221.877 1.00 0.39 \ ATOM 20 N ALA 9 3 165.176 147.722 214.809 1.00 0.39 \ ATOM 21 CA ALA 9 3 164.276 148.821 214.460 1.00 0.39 \ ATOM 22 C ALA 9 3 164.556 150.125 215.229 1.00 0.39 \ ATOM 23 O ALA 9 3 163.907 151.148 214.989 1.00 0.39 \ ATOM 24 CB ALA 9 3 162.813 148.381 214.668 1.00 0.39 \ ATOM 25 N LYS 9 4 165.519 150.083 216.150 1.00 0.39 \ ATOM 26 CA LYS 9 4 165.908 151.257 216.938 1.00 0.39 \ ATOM 27 C LYS 9 4 166.784 152.137 216.051 1.00 0.39 \ ATOM 28 O LYS 9 4 166.660 153.364 216.039 1.00 0.39 \ ATOM 29 CB LYS 9 4 166.712 150.821 218.168 1.00 0.39 \ ATOM 30 CG LYS 9 4 167.253 151.970 219.019 1.00 0.39 \ ATOM 31 CD LYS 9 4 166.163 152.652 219.845 1.00 0.39 \ ATOM 32 CE LYS 9 4 165.603 151.711 220.915 1.00 0.39 \ ATOM 33 NZ LYS 9 4 164.668 152.400 221.853 1.00 0.39 \ ATOM 34 N TRP 9 5 167.674 151.472 215.317 1.00 0.39 \ ATOM 35 CA TRP 9 5 168.606 152.115 214.397 1.00 0.39 \ ATOM 36 C TRP 9 5 167.877 152.481 213.105 1.00 0.39 \ ATOM 37 O TRP 9 5 168.361 153.288 212.305 1.00 0.39 \ ATOM 38 CB TRP 9 5 169.763 151.157 214.090 1.00 0.39 \ ATOM 39 CG TRP 9 5 170.418 150.585 215.322 1.00 0.39 \ ATOM 40 CD1 TRP 9 5 170.916 149.318 215.475 1.00 0.39 \ ATOM 41 CD2 TRP 9 5 170.656 151.261 216.568 1.00 0.39 \ ATOM 42 NE1 TRP 9 5 171.446 149.162 216.735 1.00 0.39 \ ATOM 43 CE2 TRP 9 5 171.302 150.338 217.427 1.00 0.39 \ ATOM 44 CE3 TRP 9 5 170.390 152.557 217.044 1.00 0.39 \ ATOM 45 CZ2 TRP 9 5 171.683 150.671 218.739 1.00 0.39 \ ATOM 46 CZ3 TRP 9 5 170.770 152.885 218.347 1.00 0.39 \ ATOM 47 CH2 TRP 9 5 171.410 151.943 219.176 1.00 0.39 \ ATOM 48 N ARG 9 6 166.710 151.869 212.913 1.00 0.39 \ ATOM 49 CA ARG 9 6 165.864 152.098 211.742 1.00 0.39 \ ATOM 50 C ARG 9 6 165.229 153.491 211.840 1.00 0.39 \ ATOM 51 O ARG 9 6 165.116 154.212 210.841 1.00 0.39 \ ATOM 52 CB ARG 9 6 164.777 151.007 211.687 1.00 0.39 \ ATOM 53 CG ARG 9 6 163.682 151.175 210.626 1.00 0.39 \ ATOM 54 CD ARG 9 6 164.177 150.883 209.214 1.00 0.39 \ ATOM 55 NE ARG 9 6 163.092 150.897 208.227 1.00 0.39 \ ATOM 56 CZ ARG 9 6 162.321 151.951 207.954 1.00 0.39 \ ATOM 57 NH1 ARG 9 6 162.498 153.103 208.593 1.00 0.39 \ ATOM 58 NH2 ARG 9 6 161.369 151.858 207.031 1.00 0.39 \ ATOM 59 N LYS 9 7 164.831 153.854 213.059 1.00 0.39 \ ATOM 60 CA LYS 9 7 164.200 155.141 213.343 1.00 0.39 \ ATOM 61 C LYS 9 7 165.228 156.276 213.428 1.00 0.39 \ ATOM 62 O LYS 9 7 164.887 157.448 213.248 1.00 0.39 \ ATOM 63 CB LYS 9 7 163.411 155.041 214.656 1.00 0.39 \ ATOM 64 CG LYS 9 7 162.601 156.278 215.027 1.00 0.39 \ ATOM 65 CD LYS 9 7 161.684 156.006 216.219 1.00 0.39 \ ATOM 66 CE LYS 9 7 160.741 157.177 216.473 1.00 0.39 \ ATOM 67 NZ LYS 9 7 159.797 156.925 217.605 1.00 0.39 \ ATOM 68 N LYS 9 8 166.483 155.914 213.693 1.00 0.39 \ ATOM 69 CA LYS 9 8 167.569 156.886 213.815 1.00 0.39 \ ATOM 70 C LYS 9 8 168.168 157.242 212.450 1.00 0.39 \ ATOM 71 O LYS 9 8 168.590 158.382 212.223 1.00 0.39 \ ATOM 72 CB LYS 9 8 168.661 156.329 214.743 1.00 0.39 \ ATOM 73 CG LYS 9 8 169.400 157.389 215.557 1.00 0.39 \ ATOM 74 CD LYS 9 8 170.414 156.771 216.525 1.00 0.39 \ ATOM 75 CE LYS 9 8 170.858 157.771 217.597 1.00 0.39 \ ATOM 76 NZ LYS 9 8 171.488 159.003 217.031 1.00 0.39 \ ATOM 77 N ARG 9 9 168.200 156.255 211.553 1.00 0.39 \ ATOM 78 CA ARG 9 9 168.724 156.427 210.194 1.00 0.39 \ ATOM 79 C ARG 9 9 167.823 157.387 209.409 1.00 0.39 \ ATOM 80 O ARG 9 9 168.305 158.329 208.767 1.00 0.39 \ ATOM 81 CB ARG 9 9 168.782 155.069 209.474 1.00 0.39 \ ATOM 82 CG ARG 9 9 169.334 155.122 208.045 1.00 0.39 \ ATOM 83 CD ARG 9 9 168.925 153.892 207.224 1.00 0.39 \ ATOM 84 NE ARG 9 9 169.628 152.666 207.605 1.00 0.39 \ ATOM 85 CZ ARG 9 9 170.911 152.414 207.349 1.00 0.39 \ ATOM 86 NH1 ARG 9 9 171.662 153.304 206.705 1.00 0.39 \ ATOM 87 NH2 ARG 9 9 171.443 151.259 207.728 1.00 0.39 \ ATOM 88 N THR 9 10 166.514 157.140 209.472 1.00 -2.46 \ ATOM 89 CA THR 9 10 165.531 157.971 208.776 1.00 -2.46 \ ATOM 90 C THR 9 10 165.264 159.279 209.517 1.00 -2.46 \ ATOM 91 O THR 9 10 164.607 160.179 208.988 1.00 -2.46 \ ATOM 92 CB THR 9 10 164.183 157.224 208.590 1.00 -2.46 \ ATOM 93 OG1 THR 9 10 163.638 156.870 209.872 1.00 -2.46 \ ATOM 94 CG2 THR 9 10 164.386 155.972 207.747 1.00 -2.46 \ ATOM 95 N ARG 9 11 165.771 159.374 210.744 1.00 0.39 \ ATOM 96 CA ARG 9 11 165.601 160.570 211.567 1.00 0.39 \ ATOM 97 C ARG 9 11 166.492 161.684 210.993 1.00 0.39 \ ATOM 98 O ARG 9 11 166.090 162.855 210.937 1.00 0.39 \ ATOM 99 CB ARG 9 11 165.997 160.266 213.022 1.00 0.39 \ ATOM 100 CG ARG 9 11 165.266 161.094 214.085 1.00 0.39 \ ATOM 101 CD ARG 9 11 163.794 160.683 214.232 1.00 0.39 \ ATOM 102 NE ARG 9 11 163.105 161.390 215.318 1.00 0.39 \ ATOM 103 CZ ARG 9 11 163.412 161.285 216.611 1.00 0.39 \ ATOM 104 NH1 ARG 9 11 164.407 160.497 217.006 1.00 0.39 \ ATOM 105 NH2 ARG 9 11 162.721 161.970 217.516 1.00 0.39 \ ATOM 106 N ARG 9 12 167.693 161.295 210.553 1.00 0.39 \ ATOM 107 CA ARG 9 12 168.668 162.220 209.963 1.00 0.39 \ ATOM 108 C ARG 9 12 168.211 162.623 208.566 1.00 0.39 \ ATOM 109 O ARG 9 12 168.473 163.738 208.106 1.00 0.39 \ ATOM 110 CB ARG 9 12 170.044 161.558 209.817 1.00 0.39 \ ATOM 111 CG ARG 9 12 170.503 160.722 210.991 1.00 0.39 \ ATOM 112 CD ARG 9 12 171.685 159.848 210.575 1.00 0.39 \ ATOM 113 NE ARG 9 12 171.934 158.774 211.536 1.00 0.39 \ ATOM 114 CZ ARG 9 12 172.749 157.743 211.311 1.00 0.39 \ ATOM 115 NH1 ARG 9 12 173.402 157.641 210.152 1.00 0.39 \ ATOM 116 NH2 ARG 9 12 172.909 156.805 212.240 1.00 0.39 \ ATOM 117 N LEU 9 13 167.549 161.685 207.893 1.00 0.39 \ ATOM 118 CA LEU 9 13 167.052 161.892 206.541 1.00 0.39 \ ATOM 119 C LEU 9 13 165.793 162.759 206.455 1.00 0.39 \ ATOM 120 O LEU 9 13 165.517 163.335 205.402 1.00 0.39 \ ATOM 121 CB LEU 9 13 166.822 160.535 205.856 1.00 0.39 \ ATOM 122 CG LEU 9 13 168.059 159.912 205.189 1.00 0.39 \ ATOM 123 CD1 LEU 9 13 168.469 160.780 204.004 1.00 0.39 \ ATOM 124 CD2 LEU 9 13 169.214 159.784 206.185 1.00 0.39 \ ATOM 125 N LYS 9 14 165.025 162.852 207.542 1.00 0.39 \ ATOM 126 CA LYS 9 14 163.833 163.706 207.534 1.00 0.39 \ ATOM 127 C LYS 9 14 164.360 165.138 207.653 1.00 0.39 \ ATOM 128 O LYS 9 14 163.858 166.070 207.014 1.00 0.39 \ ATOM 129 CB LYS 9 14 162.914 163.399 208.725 1.00 0.39 \ ATOM 130 CG LYS 9 14 162.259 162.023 208.706 1.00 0.39 \ ATOM 131 CD LYS 9 14 161.272 161.861 209.865 1.00 0.39 \ ATOM 132 CE LYS 9 14 161.958 161.943 211.235 1.00 0.39 \ ATOM 133 NZ LYS 9 14 160.989 161.828 212.374 1.00 0.39 \ ATOM 134 N ARG 9 15 165.395 165.280 208.480 1.00 0.39 \ ATOM 135 CA ARG 9 15 166.061 166.555 208.731 1.00 0.39 \ ATOM 136 C ARG 9 15 166.924 166.935 207.515 1.00 0.39 \ ATOM 137 O ARG 9 15 167.173 168.116 207.256 1.00 0.39 \ ATOM 138 CB ARG 9 15 166.926 166.424 209.993 1.00 0.39 \ ATOM 139 CG ARG 9 15 167.788 167.633 210.328 1.00 0.39 \ ATOM 140 CD ARG 9 15 168.623 167.368 211.576 1.00 0.39 \ ATOM 141 NE ARG 9 15 169.475 166.185 211.437 1.00 0.39 \ ATOM 142 CZ ARG 9 15 170.237 165.686 212.409 1.00 0.39 \ ATOM 143 NH1 ARG 9 15 170.258 166.266 213.603 1.00 0.39 \ ATOM 144 NH2 ARG 9 15 170.978 164.606 212.187 1.00 0.39 \ ATOM 145 N LYS 9 16 167.362 165.918 206.773 1.00 0.39 \ ATOM 146 CA LYS 9 16 168.190 166.105 205.583 1.00 0.39 \ ATOM 147 C LYS 9 16 167.341 166.603 204.405 1.00 0.39 \ ATOM 148 O LYS 9 16 167.755 167.502 203.669 1.00 0.39 \ ATOM 149 CB LYS 9 16 168.884 164.783 205.217 1.00 0.39 \ ATOM 150 CG LYS 9 16 169.908 164.886 204.084 1.00 0.39 \ ATOM 151 CD LYS 9 16 170.607 163.549 203.828 1.00 0.39 \ ATOM 152 CE LYS 9 16 171.615 163.639 202.676 1.00 0.39 \ ATOM 153 NZ LYS 9 16 170.979 163.936 201.356 1.00 0.39 \ ATOM 154 N ARG 9 17 166.152 166.020 204.244 1.00 0.39 \ ATOM 155 CA ARG 9 17 165.238 166.397 203.164 1.00 0.39 \ ATOM 156 C ARG 9 17 164.521 167.716 203.454 1.00 0.39 \ ATOM 157 O ARG 9 17 163.913 168.316 202.558 1.00 0.39 \ ATOM 158 CB ARG 9 17 164.187 165.299 202.936 1.00 0.39 \ ATOM 159 CG ARG 9 17 164.699 164.036 202.248 1.00 0.39 \ ATOM 160 CD ARG 9 17 163.576 163.002 202.064 1.00 0.39 \ ATOM 161 NE ARG 9 17 163.159 162.392 203.329 1.00 0.39 \ ATOM 162 CZ ARG 9 17 162.211 161.462 203.452 1.00 0.39 \ ATOM 163 NH1 ARG 9 17 161.556 161.017 202.384 1.00 0.39 \ ATOM 164 NH2 ARG 9 17 161.924 160.967 204.652 1.00 0.39 \ ATOM 165 N ARG 9 18 164.595 168.157 204.709 1.00 0.39 \ ATOM 166 CA ARG 9 18 163.956 169.399 205.140 1.00 0.39 \ ATOM 167 C ARG 9 18 164.872 170.598 204.869 1.00 0.39 \ ATOM 168 O ARG 9 18 164.397 171.691 204.551 1.00 0.39 \ ATOM 169 CB ARG 9 18 163.616 169.321 206.635 1.00 0.39 \ ATOM 170 CG ARG 9 18 162.605 170.362 207.124 1.00 0.39 \ ATOM 171 CD ARG 9 18 162.467 170.326 208.642 1.00 0.39 \ ATOM 172 NE ARG 9 18 162.187 168.979 209.140 1.00 0.39 \ ATOM 173 CZ ARG 9 18 162.037 168.664 210.425 1.00 0.39 \ ATOM 174 NH1 ARG 9 18 162.137 169.601 211.361 1.00 0.39 \ ATOM 175 NH2 ARG 9 18 161.792 167.406 210.776 1.00 0.39 \ ATOM 176 N LYS 9 19 166.182 170.385 204.994 1.00 0.39 \ ATOM 177 CA LYS 9 19 167.164 171.440 204.752 1.00 0.39 \ ATOM 178 C LYS 9 19 167.420 171.637 203.254 1.00 0.39 \ ATOM 179 O LYS 9 19 167.857 172.708 202.822 1.00 0.39 \ ATOM 180 CB LYS 9 19 168.477 171.116 205.478 1.00 0.39 \ ATOM 181 CG LYS 9 19 168.541 171.614 206.929 1.00 0.39 \ ATOM 182 CD LYS 9 19 167.449 171.002 207.809 1.00 0.39 \ ATOM 183 CE LYS 9 19 167.362 171.676 209.185 1.00 0.39 \ ATOM 184 NZ LYS 9 19 168.597 171.550 210.018 1.00 0.39 \ ATOM 185 N VAL 9 20 167.140 170.596 202.471 1.00 -2.46 \ ATOM 186 CA VAL 9 20 167.315 170.639 201.019 1.00 -2.46 \ ATOM 187 C VAL 9 20 166.045 171.218 200.375 1.00 -2.46 \ ATOM 188 O VAL 9 20 166.078 171.721 199.246 1.00 -2.46 \ ATOM 189 CB VAL 9 20 167.610 169.216 200.443 1.00 -2.46 \ ATOM 190 CG1 VAL 9 20 167.740 169.271 198.925 1.00 -2.46 \ ATOM 191 CG2 VAL 9 20 168.899 168.668 201.044 1.00 -2.46 \ ATOM 192 N ARG 9 21 164.935 171.154 201.113 1.00 0.39 \ ATOM 193 CA ARG 9 21 163.652 171.687 200.657 1.00 0.39 \ ATOM 194 C ARG 9 21 163.590 173.165 201.092 1.00 0.39 \ ATOM 195 O ARG 9 21 162.784 173.957 200.575 1.00 0.39 \ ATOM 196 CB ARG 9 21 162.502 170.874 201.279 1.00 0.39 \ ATOM 197 CG ARG 9 21 161.139 171.030 200.601 1.00 0.39 \ ATOM 198 CD ARG 9 21 160.088 170.121 201.253 1.00 0.39 \ ATOM 199 NE ARG 9 21 158.782 170.168 200.588 1.00 0.39 \ ATOM 200 CZ ARG 9 21 157.954 171.213 200.594 1.00 0.39 \ ATOM 201 NH1 ARG 9 21 156.792 171.140 199.952 1.00 0.39 \ ATOM 202 NH2 ARG 9 21 158.276 172.330 201.239 1.00 0.39 \ ATOM 203 N ALA 9 22 164.463 173.522 202.039 1.00 -2.46 \ ATOM 204 CA ALA 9 22 164.571 174.887 202.559 1.00 -2.46 \ ATOM 205 C ALA 9 22 165.616 175.625 201.713 1.00 -2.46 \ ATOM 206 O ALA 9 22 165.766 176.850 201.800 1.00 -2.46 \ ATOM 207 CB ALA 9 22 164.997 174.862 204.032 1.00 -2.46 \ ATOM 208 N ARG 9 23 166.336 174.853 200.898 1.00 0.39 \ ATOM 209 CA ARG 9 23 167.355 175.380 199.991 1.00 0.39 \ ATOM 210 C ARG 9 23 166.602 176.045 198.836 1.00 0.39 \ ATOM 211 O ARG 9 23 167.190 176.766 198.017 1.00 0.39 \ ATOM 212 CB ARG 9 23 168.233 174.230 199.463 1.00 0.39 \ ATOM 213 CG ARG 9 23 169.228 174.628 198.370 1.00 0.39 \ ATOM 214 CD ARG 9 23 169.038 173.807 197.088 1.00 0.39 \ ATOM 215 NE ARG 9 23 169.641 172.475 197.155 1.00 0.39 \ ATOM 216 CZ ARG 9 23 170.952 172.232 197.125 1.00 0.39 \ ATOM 217 NH1 ARG 9 23 171.398 170.982 197.195 1.00 0.39 \ ATOM 218 NH2 ARG 9 23 171.822 173.235 197.028 1.00 0.39 \ ATOM 219 N SER 9 24 165.289 175.799 198.801 1.00 -1.00 \ ATOM 220 CA SER 9 24 164.403 176.333 197.763 1.00 -1.00 \ ATOM 221 C SER 9 24 163.531 177.519 198.227 1.00 -1.00 \ ATOM 222 O SER 9 24 162.368 177.640 197.818 1.00 -1.00 \ ATOM 223 CB SER 9 24 163.492 175.211 197.219 1.00 -1.00 \ ATOM 224 OG SER 9 24 164.231 174.128 196.667 1.00 -1.00 \ ATOM 225 N LYS 9 25 164.090 178.390 199.068 1.00 -1.00 \ ATOM 226 CA LYS 9 25 163.345 179.554 199.555 1.00 -1.00 \ ATOM 227 C LYS 9 25 164.247 180.794 199.712 1.00 -1.00 \ ATOM 228 O LYS 9 25 165.482 180.618 199.828 1.00 -1.00 \ ATOM 229 CB LYS 9 25 162.680 179.207 200.897 1.00 -1.00 \ ATOM 230 CG LYS 9 25 161.462 180.058 201.254 1.00 -1.00 \ ATOM 231 CD LYS 9 25 160.889 179.650 202.606 1.00 -1.00 \ ATOM 232 CE LYS 9 25 160.414 178.200 202.608 1.00 -1.00 \ ATOM 233 NZ LYS 9 25 159.926 177.777 203.953 1.00 -1.00 \ ATOM 234 OXT LYS 9 25 163.712 181.931 199.725 1.00 -1.00 \ """, "e3j77911_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3j77911_csv", state=0, origin=1) cmd.zoom("e3j77911_csv", animate=-1)