cmd.read_pdbstr("""\ ATOM 1 N ALA D 1 -3.698 41.277 75.509 1.00 -1.00 \ ATOM 2 CA ALA D 1 -3.317 40.259 74.433 1.00 -1.00 \ ATOM 3 C ALA D 1 -1.987 40.670 73.803 1.00 -1.00 \ ATOM 4 O ALA D 1 -1.535 41.848 73.929 1.00 -1.00 \ ATOM 5 CB ALA D 1 -4.408 40.081 73.390 1.00 -1.00 \ ATOM 6 N ASN D 2 -1.381 39.688 73.118 1.00 -0.01 \ ATOM 7 CA ASN D 2 -0.027 39.943 72.541 1.00 -0.01 \ ATOM 8 C ASN D 2 -0.023 39.822 71.021 1.00 -0.01 \ ATOM 9 O ASN D 2 -0.676 38.887 70.404 1.00 -0.01 \ ATOM 10 CB ASN D 2 1.061 39.035 73.176 1.00 -0.01 \ ATOM 11 CG ASN D 2 1.139 39.230 74.670 1.00 -0.01 \ ATOM 12 OD1 ASN D 2 1.013 40.360 75.123 1.00 -0.01 \ ATOM 13 ND2 ASN D 2 1.284 38.189 75.408 1.00 -0.01 \ ATOM 14 N SER D 3 0.587 40.829 70.444 1.00 0.62 \ ATOM 15 CA SER D 3 0.887 40.832 68.989 1.00 0.62 \ ATOM 16 C SER D 3 2.414 40.878 68.836 1.00 0.62 \ ATOM 17 O SER D 3 3.167 41.143 69.768 1.00 0.62 \ ATOM 18 CB SER D 3 0.099 41.924 68.300 1.00 0.62 \ ATOM 19 OG SER D 3 0.539 43.197 68.705 1.00 0.62 \ ATOM 20 N PHE D 4 2.892 40.596 67.636 1.00 0.04 \ ATOM 21 CA PHE D 4 4.321 40.468 67.476 1.00 0.04 \ ATOM 22 C PHE D 4 5.122 41.725 67.851 1.00 0.04 \ ATOM 23 O PHE D 4 4.892 42.856 67.341 1.00 0.04 \ ATOM 24 CB PHE D 4 4.566 40.161 65.970 1.00 0.04 \ ATOM 25 CG PHE D 4 6.037 40.017 65.639 1.00 0.04 \ ATOM 26 CD1 PHE D 4 6.768 38.952 66.202 1.00 0.04 \ ATOM 27 CD2 PHE D 4 6.671 40.921 64.767 1.00 0.04 \ ATOM 28 CE1 PHE D 4 8.193 38.773 65.921 1.00 0.04 \ ATOM 29 CE2 PHE D 4 8.082 40.756 64.495 1.00 0.04 \ ATOM 30 CZ PHE D 4 8.806 39.674 65.050 1.00 0.04 \ ATOM 31 N LEU D 5 6.053 41.491 68.749 1.00 0.08 \ ATOM 32 CA LEU D 5 6.890 42.496 69.366 1.00 0.08 \ ATOM 33 C LEU D 5 6.150 43.578 70.181 1.00 0.08 \ ATOM 34 O LEU D 5 6.837 44.457 70.732 1.00 0.08 \ ATOM 35 CB LEU D 5 7.918 43.121 68.357 1.00 0.08 \ ATOM 36 CG LEU D 5 8.959 42.032 67.911 1.00 0.08 \ ATOM 37 CD1 LEU D 5 9.963 42.825 67.009 1.00 0.08 \ ATOM 38 CD2 LEU D 5 9.761 41.359 69.022 1.00 0.08 \ ATOM 63 N LEU D 8 7.640 44.448 73.714 1.00 0.62 \ ATOM 64 CA LEU D 8 8.630 45.482 73.869 1.00 0.62 \ ATOM 65 C LEU D 8 8.083 46.839 74.360 1.00 0.62 \ ATOM 66 O LEU D 8 8.886 47.671 74.749 1.00 0.62 \ ATOM 67 CB LEU D 8 9.430 45.685 72.550 1.00 0.62 \ ATOM 68 CG LEU D 8 10.382 44.470 72.264 1.00 0.62 \ ATOM 69 CD1 LEU D 8 11.150 44.712 70.971 1.00 0.62 \ ATOM 70 CD2 LEU D 8 11.339 44.073 73.365 1.00 0.62 \ ATOM 71 N ARG D 9 6.765 47.041 74.328 1.00 1.29 \ ATOM 72 CA ARG D 9 6.187 48.329 74.667 1.00 1.29 \ ATOM 73 C ARG D 9 5.917 48.300 76.164 1.00 1.29 \ ATOM 74 O ARG D 9 5.709 47.219 76.747 1.00 1.29 \ ATOM 75 CB ARG D 9 4.889 48.506 73.898 1.00 1.29 \ ATOM 76 CG ARG D 9 5.002 48.683 72.332 1.00 1.29 \ ATOM 77 CD ARG D 9 3.594 48.737 71.775 1.00 1.29 \ ATOM 78 NE ARG D 9 2.904 50.041 72.025 1.00 1.29 \ ATOM 79 CZ ARG D 9 1.728 50.317 71.492 1.00 1.29 \ ATOM 80 NH1 ARG D 9 1.054 49.386 70.762 1.00 1.29 \ ATOM 81 NH2 ARG D 9 1.175 51.524 71.693 1.00 1.29 \ ATOM 82 N HIS D 10 5.913 49.492 76.774 1.00 0.62 \ ATOM 83 CA HIS D 10 5.515 49.557 78.211 1.00 0.62 \ ATOM 84 C HIS D 10 4.131 48.987 78.361 1.00 0.62 \ ATOM 85 O HIS D 10 3.210 49.222 77.509 1.00 0.62 \ ATOM 86 CB HIS D 10 5.564 51.024 78.664 1.00 0.62 \ ATOM 87 CG HIS D 10 5.266 51.257 80.110 1.00 0.62 \ ATOM 88 ND1 HIS D 10 6.234 51.678 81.010 1.00 0.62 \ ATOM 89 CD2 HIS D 10 4.112 51.152 80.822 1.00 0.62 \ ATOM 90 CE1 HIS D 10 5.691 51.801 82.213 1.00 0.62 \ ATOM 91 NE2 HIS D 10 4.412 51.460 82.127 1.00 0.62 \ ATOM 92 N SER D 11 3.942 48.338 79.504 1.00 -1.00 \ ATOM 93 CA SER D 11 2.549 47.844 79.899 1.00 -1.00 \ ATOM 94 C SER D 11 1.519 48.959 79.917 1.00 -1.00 \ ATOM 95 O SER D 11 1.822 50.151 80.180 1.00 -1.00 \ ATOM 96 CB SER D 11 2.650 47.052 81.211 1.00 -1.00 \ ATOM 97 OG SER D 11 3.140 47.934 82.208 1.00 -1.00 \ ATOM 98 N SER D 12 0.289 48.578 79.618 1.00 -1.00 \ ATOM 99 CA SER D 12 -0.799 49.517 79.724 1.00 -1.00 \ ATOM 100 C SER D 12 -2.065 48.794 80.075 1.00 -1.00 \ ATOM 101 O SER D 12 -2.618 47.963 79.309 1.00 -1.00 \ ATOM 102 CB SER D 12 -0.966 50.326 78.435 1.00 -1.00 \ ATOM 103 OG SER D 12 -2.245 50.953 78.399 1.00 -1.00 \ ATOM 104 N LEU D 13 -2.636 49.183 81.224 1.00 -1.00 \ ATOM 105 CA LEU D 13 -3.970 48.697 81.544 1.00 -1.00 \ ATOM 106 C LEU D 13 -5.018 48.909 80.441 1.00 -1.00 \ ATOM 107 O LEU D 13 -5.716 47.978 80.023 1.00 -1.00 \ ATOM 108 CB LEU D 13 -4.361 49.329 82.956 1.00 -1.00 \ ATOM 109 CG LEU D 13 -5.801 49.097 83.278 1.00 -1.00 \ ATOM 110 CD1 LEU D 13 -5.988 47.682 83.724 1.00 -1.00 \ ATOM 111 CD2 LEU D 13 -6.209 50.032 84.448 1.00 -1.00 \ ATOM 124 N ARG D 15 -4.614 49.622 77.145 1.00 -1.00 \ ATOM 125 CA ARG D 15 -4.301 48.978 75.876 1.00 -1.00 \ ATOM 126 C ARG D 15 -4.250 47.451 75.928 1.00 -1.00 \ ATOM 127 O ARG D 15 -4.370 46.798 74.891 1.00 -1.00 \ ATOM 128 CB ARG D 15 -2.982 49.521 75.318 1.00 -1.00 \ ATOM 129 CG ARG D 15 -2.618 48.977 73.947 1.00 -1.00 \ ATOM 130 CD ARG D 15 -1.163 49.261 73.608 1.00 -1.00 \ ATOM 131 NE ARG D 15 -0.251 48.383 74.336 1.00 -1.00 \ ATOM 132 CZ ARG D 15 0.709 48.812 75.149 1.00 -1.00 \ ATOM 133 NH1 ARG D 15 0.886 50.112 75.342 1.00 -1.00 \ ATOM 134 NH2 ARG D 15 1.493 47.941 75.770 1.00 -1.00 \ ATOM 147 N CYS D 17 -5.772 45.475 78.774 1.00 1.29 \ ATOM 148 CA CYS D 17 -6.689 44.624 79.524 1.00 1.29 \ ATOM 149 C CYS D 17 -8.130 45.098 79.372 1.00 1.29 \ ATOM 150 O CYS D 17 -9.068 44.393 79.744 1.00 1.29 \ ATOM 151 CB CYS D 17 -6.300 44.589 81.003 1.00 1.29 \ ATOM 152 SG CYS D 17 -4.639 43.951 81.324 1.00 1.29 \ ATOM 153 N ILE D 18 -8.299 46.296 78.822 1.00 -0.93 \ ATOM 154 CA ILE D 18 -9.618 46.863 78.621 1.00 -0.93 \ ATOM 155 C ILE D 18 -9.958 46.874 77.136 1.00 -0.93 \ ATOM 156 O ILE D 18 -11.046 46.385 76.759 1.00 -0.93 \ ATOM 157 CB ILE D 18 -9.720 48.260 79.296 1.00 -0.93 \ ATOM 158 CG1 ILE D 18 -9.636 48.030 80.825 1.00 -0.93 \ ATOM 159 CG2 ILE D 18 -11.004 49.036 78.768 1.00 -0.93 \ ATOM 160 CD1 ILE D 18 -9.122 49.112 81.537 1.00 -0.93 \ ATOM 185 N ILE D 21 -8.378 41.566 75.681 1.00 -1.33 \ ATOM 186 CA ILE D 21 -8.405 40.630 76.792 1.00 -1.33 \ ATOM 187 C ILE D 21 -6.943 40.366 77.231 1.00 -1.33 \ ATOM 188 O ILE D 21 -6.096 40.102 76.361 1.00 -1.33 \ ATOM 189 CB ILE D 21 -9.034 39.306 76.385 1.00 -1.33 \ ATOM 190 CG1 ILE D 21 -10.520 39.630 75.944 1.00 -1.33 \ ATOM 191 CG2 ILE D 21 -8.866 38.340 77.522 1.00 -1.33 \ ATOM 192 CD1 ILE D 21 -11.184 38.521 75.185 1.00 -1.33 \ ATOM 193 N CYS D 22 -6.645 40.390 78.526 1.00 1.29 \ ATOM 194 CA CYS D 22 -5.273 40.129 78.975 1.00 1.29 \ ATOM 195 C CYS D 22 -5.160 38.919 79.908 1.00 1.29 \ ATOM 196 O CYS D 22 -6.029 38.703 80.753 1.00 1.29 \ ATOM 197 CB CYS D 22 -4.691 41.370 79.656 1.00 1.29 \ ATOM 198 SG CYS D 22 -5.608 41.923 81.112 1.00 1.29 \ ATOM 199 N ASP D 23 -4.091 38.135 79.760 1.00 -0.71 \ ATOM 200 CA ASP D 23 -3.895 36.974 80.628 1.00 -0.71 \ ATOM 201 C ASP D 23 -3.224 37.460 81.988 1.00 -0.71 \ ATOM 202 O ASP D 23 -2.941 38.670 82.108 1.00 -0.71 \ ATOM 203 CB ASP D 23 -3.120 35.859 79.911 1.00 -0.71 \ ATOM 204 CG ASP D 23 -1.646 36.169 79.670 1.00 -0.71 \ ATOM 205 OD1 ASP D 23 -0.986 36.991 80.355 1.00 -0.71 \ ATOM 206 OD2 ASP D 23 -1.134 35.504 78.730 1.00 -0.71 \ ATOM 207 N PHE D 24 -3.013 36.547 82.957 1.00 -0.90 \ ATOM 208 CA PHE D 24 -2.687 36.953 84.323 1.00 -0.90 \ ATOM 209 C PHE D 24 -1.286 37.547 84.339 1.00 -0.90 \ ATOM 210 O PHE D 24 -1.041 38.541 85.009 1.00 -0.90 \ ATOM 211 CB PHE D 24 -2.768 35.714 85.220 1.00 -0.90 \ ATOM 212 CG PHE D 24 -2.644 35.977 86.691 1.00 -0.90 \ ATOM 213 CD1 PHE D 24 -3.064 37.175 87.274 1.00 -0.90 \ ATOM 214 CD2 PHE D 24 -2.188 34.961 87.513 1.00 -0.90 \ ATOM 215 CE1 PHE D 24 -2.918 37.413 88.632 1.00 -0.90 \ ATOM 216 CE2 PHE D 24 -2.036 35.176 88.887 1.00 -0.90 \ ATOM 217 CZ PHE D 24 -2.447 36.413 89.452 1.00 -0.90 \ ATOM 242 N ALA D 27 -1.359 40.983 83.170 1.00 0.62 \ ATOM 243 CA ALA D 27 -1.885 41.813 84.266 1.00 0.62 \ ATOM 244 C ALA D 27 -0.779 42.113 85.294 1.00 0.62 \ ATOM 245 O ALA D 27 -0.614 43.270 85.728 1.00 0.62 \ ATOM 246 CB ALA D 27 -3.175 41.119 84.896 1.00 0.62 \ ATOM 247 N LYS D 28 -0.062 41.088 85.730 1.00 0.62 \ ATOM 248 CA LYS D 28 1.039 41.270 86.684 1.00 0.62 \ ATOM 249 C LYS D 28 2.086 42.276 86.184 1.00 0.62 \ ATOM 250 O LYS D 28 2.638 43.102 86.964 1.00 0.62 \ ATOM 251 CB LYS D 28 1.639 39.924 87.110 1.00 0.62 \ ATOM 252 CG LYS D 28 0.740 39.169 87.977 1.00 0.62 \ ATOM 253 CD LYS D 28 1.499 37.969 88.430 1.00 0.62 \ ATOM 254 CE LYS D 28 0.972 36.727 87.817 1.00 0.62 \ ATOM 255 NZ LYS D 28 1.568 35.521 88.519 1.00 0.62 \ ATOM 268 N ILE D 30 1.358 44.870 84.282 1.00 0.11 \ ATOM 269 CA ILE D 30 0.722 46.208 84.532 1.00 0.11 \ ATOM 270 C ILE D 30 0.935 46.595 86.013 1.00 0.11 \ ATOM 271 O ILE D 30 1.370 47.729 86.305 1.00 0.11 \ ATOM 272 CB ILE D 30 -0.752 46.162 84.187 1.00 0.11 \ ATOM 273 CG1 ILE D 30 -0.850 46.078 82.641 1.00 0.11 \ ATOM 274 CG2 ILE D 30 -1.477 47.521 84.592 1.00 0.11 \ ATOM 275 CD1 ILE D 30 -2.217 45.521 82.113 1.00 0.11 \ ATOM 276 N PHE D 31 0.666 45.671 86.942 1.00 -0.90 \ ATOM 277 CA PHE D 31 0.557 46.056 88.386 1.00 -0.90 \ ATOM 278 C PHE D 31 1.990 46.405 88.863 1.00 -0.90 \ ATOM 279 O PHE D 31 2.166 47.326 89.625 1.00 -0.90 \ ATOM 280 CB PHE D 31 -0.009 44.917 89.246 1.00 -0.90 \ ATOM 281 CG PHE D 31 -1.308 44.372 88.758 1.00 -0.90 \ ATOM 282 CD1 PHE D 31 -2.254 45.205 88.218 1.00 -0.90 \ ATOM 283 CD2 PHE D 31 -1.587 43.057 88.957 1.00 -0.90 \ ATOM 284 CE1 PHE D 31 -3.467 44.686 87.759 1.00 -0.90 \ ATOM 285 CE2 PHE D 31 -2.782 42.498 88.505 1.00 -0.90 \ ATOM 286 CZ PHE D 31 -3.704 43.255 87.945 1.00 -0.90 \ ATOM 287 N GLN D 32 3.011 45.741 88.303 1.00 0.62 \ ATOM 288 CA GLN D 32 4.429 46.028 88.642 1.00 0.62 \ ATOM 289 C GLN D 32 4.903 47.402 88.105 1.00 0.62 \ ATOM 290 O GLN D 32 5.806 48.005 88.661 1.00 0.62 \ ATOM 291 CB GLN D 32 5.348 44.933 88.029 1.00 0.62 \ ATOM 292 CG GLN D 32 6.255 44.207 89.037 1.00 0.62 \ ATOM 293 CD GLN D 32 6.558 42.710 88.692 1.00 0.62 \ ATOM 294 OE1 GLN D 32 6.139 42.162 87.632 1.00 0.62 \ ATOM 295 NE2 GLN D 32 7.263 42.036 89.621 1.00 0.62 \ ATOM 296 N ASN D 33 4.283 47.912 87.044 1.00 -0.42 \ ATOM 297 CA ASN D 33 4.889 48.969 86.249 1.00 -0.42 \ ATOM 298 C ASN D 33 4.134 50.279 86.085 1.00 -0.42 \ ATOM 299 O ASN D 33 3.137 50.644 86.771 1.00 -0.42 \ ATOM 300 CB ASN D 33 5.330 48.404 84.878 1.00 -0.42 \ ATOM 301 CG ASN D 33 6.543 47.470 85.008 1.00 -0.42 \ ATOM 302 OD1 ASN D 33 7.681 47.946 85.200 1.00 -0.42 \ ATOM 303 ND2 ASN D 33 6.309 46.129 84.917 1.00 -0.42 \ ATOM 304 OXT ASN D 33 4.617 51.022 85.215 1.00 -0.42 \ """, "e3jtcD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3jtcD1_csv", state=0, origin=1) cmd.zoom("e3jtcD1_csv", animate=-1)