cmd.read_pdbstr("""\ ATOM 1 N LEU A 7 29.888 -44.129 23.961 1.00 0.58 \ ATOM 2 CA LEU A 7 29.516 -43.023 23.032 1.00 0.58 \ ATOM 3 C LEU A 7 30.792 -42.325 22.609 1.00 0.58 \ ATOM 4 O LEU A 7 31.727 -42.206 23.400 1.00 0.58 \ ATOM 5 CB LEU A 7 28.581 -42.017 23.703 1.00 0.58 \ ATOM 6 CG LEU A 7 27.194 -42.424 24.198 1.00 0.58 \ ATOM 7 CD1 LEU A 7 26.733 -41.525 25.373 1.00 0.58 \ ATOM 8 CD2 LEU A 7 26.193 -42.393 23.048 1.00 0.58 \ ATOM 9 N PRO A 8 30.827 -41.840 21.360 1.00 0.41 \ ATOM 10 CA PRO A 8 32.049 -41.350 20.684 1.00 0.41 \ ATOM 11 C PRO A 8 32.704 -40.068 21.310 1.00 0.41 \ ATOM 12 O PRO A 8 32.467 -39.789 22.507 1.00 0.41 \ ATOM 13 CB PRO A 8 31.588 -41.132 19.223 1.00 0.41 \ ATOM 14 CG PRO A 8 30.157 -41.651 19.153 1.00 0.41 \ ATOM 15 CD PRO A 8 29.619 -41.638 20.542 1.00 0.41 \ ATOM 16 N PRO A 9 33.533 -39.307 20.507 1.00 -0.79 \ ATOM 17 CA PRO A 9 34.331 -38.163 21.045 1.00 -0.79 \ ATOM 18 C PRO A 9 33.534 -37.037 21.710 1.00 -0.79 \ ATOM 19 O PRO A 9 32.986 -36.172 20.989 1.00 -0.79 \ ATOM 20 CB PRO A 9 35.099 -37.626 19.807 1.00 -0.79 \ ATOM 21 CG PRO A 9 35.157 -38.816 18.827 1.00 -0.79 \ ATOM 22 CD PRO A 9 33.844 -39.564 19.074 1.00 -0.79 \ ATOM 23 N GLY A 10 33.487 -37.064 23.057 1.00 -0.48 \ ATOM 24 CA GLY A 10 32.892 -35.995 23.881 1.00 -0.48 \ ATOM 25 C GLY A 10 31.374 -35.894 23.945 1.00 -0.48 \ ATOM 26 O GLY A 10 30.815 -34.828 24.203 1.00 -0.48 \ ATOM 27 N TRP A 11 30.705 -37.009 23.708 1.00 2.12 \ ATOM 28 CA TRP A 11 29.261 -37.054 23.736 1.00 2.12 \ ATOM 29 C TRP A 11 28.871 -37.493 25.127 1.00 2.12 \ ATOM 30 O TRP A 11 29.654 -38.169 25.805 1.00 2.12 \ ATOM 31 CB TRP A 11 28.721 -38.028 22.669 1.00 2.12 \ ATOM 32 CG TRP A 11 28.598 -37.415 21.288 1.00 2.12 \ ATOM 33 CD1 TRP A 11 29.437 -37.610 20.225 1.00 2.12 \ ATOM 34 CD2 TRP A 11 27.594 -36.483 20.832 1.00 2.12 \ ATOM 35 NE1 TRP A 11 29.009 -36.877 19.133 1.00 2.12 \ ATOM 36 CE2 TRP A 11 27.890 -36.173 19.479 1.00 2.12 \ ATOM 37 CE3 TRP A 11 26.474 -35.890 21.429 1.00 2.12 \ ATOM 38 CZ2 TRP A 11 27.110 -35.309 18.724 1.00 2.12 \ ATOM 39 CZ3 TRP A 11 25.697 -35.050 20.679 1.00 2.12 \ ATOM 40 CH2 TRP A 11 26.016 -34.760 19.335 1.00 2.12 \ ATOM 41 N GLU A 12 27.671 -37.108 25.547 1.00 -0.42 \ ATOM 42 CA GLU A 12 27.196 -37.364 26.891 1.00 -0.42 \ ATOM 43 C GLU A 12 25.688 -37.363 26.880 1.00 -0.42 \ ATOM 44 O GLU A 12 25.071 -36.527 26.199 1.00 -0.42 \ ATOM 45 CB GLU A 12 27.729 -36.278 27.852 1.00 -0.42 \ ATOM 46 CG GLU A 12 26.685 -35.548 28.768 1.00 -0.42 \ ATOM 47 CD GLU A 12 26.732 -33.981 28.688 1.00 -0.42 \ ATOM 48 OE1 GLU A 12 25.675 -33.376 28.407 1.00 -0.42 \ ATOM 49 OE2 GLU A 12 27.796 -33.347 28.896 1.00 -0.42 \ ATOM 50 N LYS A 13 25.106 -38.293 27.644 1.00 -0.52 \ ATOM 51 CA LYS A 13 23.655 -38.330 27.935 1.00 -0.52 \ ATOM 52 C LYS A 13 23.203 -37.117 28.754 1.00 -0.52 \ ATOM 53 O LYS A 13 23.867 -36.726 29.707 1.00 -0.52 \ ATOM 54 CB LYS A 13 23.275 -39.611 28.691 1.00 -0.52 \ ATOM 55 CG LYS A 13 22.948 -40.826 27.833 1.00 -0.52 \ ATOM 56 CD LYS A 13 21.905 -41.727 28.540 1.00 -0.52 \ ATOM 57 CE LYS A 13 21.488 -42.960 27.682 1.00 -0.52 \ ATOM 58 NZ LYS A 13 20.143 -43.549 28.084 1.00 -0.52 \ ATOM 59 N ALA A 14 22.079 -36.530 28.358 1.00 -0.61 \ ATOM 60 CA ALA A 14 21.465 -35.418 29.065 1.00 -0.61 \ ATOM 61 C ALA A 14 19.957 -35.608 29.030 1.00 -0.61 \ ATOM 62 O ALA A 14 19.462 -36.421 28.253 1.00 -0.61 \ ATOM 63 CB ALA A 14 21.849 -34.113 28.434 1.00 -0.61 \ ATOM 64 N MET A 15 19.237 -34.868 29.872 1.00 -0.78 \ ATOM 65 CA MET A 15 17.783 -35.009 30.018 1.00 -0.78 \ ATOM 66 C MET A 15 17.119 -33.673 29.724 1.00 -0.78 \ ATOM 67 O MET A 15 17.634 -32.615 30.126 1.00 -0.78 \ ATOM 68 CB MET A 15 17.437 -35.432 31.450 1.00 -0.78 \ ATOM 69 CG MET A 15 16.103 -36.169 31.640 1.00 -0.78 \ ATOM 70 SD MET A 15 16.232 -37.990 31.472 1.00 -0.78 \ ATOM 71 CE MET A 15 17.571 -38.451 32.607 1.00 -0.78 \ ATOM 72 N SER A 16 15.979 -33.711 29.038 1.00 -0.03 \ ATOM 73 CA SER A 16 15.295 -32.471 28.656 1.00 -0.03 \ ATOM 74 C SER A 16 14.501 -31.821 29.809 1.00 -0.03 \ ATOM 75 O SER A 16 13.788 -32.505 30.552 1.00 -0.03 \ ATOM 76 CB SER A 16 14.413 -32.701 27.441 1.00 -0.03 \ ATOM 77 OG SER A 16 13.706 -31.526 27.122 1.00 -0.03 \ ATOM 78 N ARG A 17 14.657 -30.501 29.958 1.00 -0.74 \ ATOM 79 CA ARG A 17 13.948 -29.721 30.993 1.00 -0.74 \ ATOM 80 C ARG A 17 12.443 -29.629 30.722 1.00 -0.74 \ ATOM 81 O ARG A 17 11.624 -29.852 31.633 1.00 -0.74 \ ATOM 82 CB ARG A 17 14.568 -28.319 31.184 1.00 -0.74 \ ATOM 83 CG ARG A 17 15.401 -27.789 29.996 1.00 -0.74 \ ATOM 84 CD ARG A 17 16.653 -27.007 30.473 1.00 -0.74 \ ATOM 85 NE ARG A 17 17.576 -27.823 31.289 1.00 -0.74 \ ATOM 86 CZ ARG A 17 17.795 -27.670 32.605 1.00 -0.74 \ ATOM 87 NH1 ARG A 17 17.177 -26.716 33.301 1.00 -0.74 \ ATOM 88 NH2 ARG A 17 18.647 -28.477 33.235 1.00 -0.74 \ ATOM 89 N SER A 18 12.095 -29.325 29.463 1.00 -0.74 \ ATOM 90 CA SER A 18 10.697 -29.297 28.979 1.00 -0.74 \ ATOM 91 C SER A 18 10.053 -30.697 28.801 1.00 -0.74 \ ATOM 92 O SER A 18 8.882 -30.895 29.134 1.00 -0.74 \ ATOM 93 CB SER A 18 10.613 -28.490 27.656 1.00 -0.74 \ ATOM 94 OG SER A 18 9.271 -28.132 27.304 1.00 -0.74 \ ATOM 95 N SER A 19 10.837 -31.650 28.302 1.00 -1.00 \ ATOM 96 CA SER A 19 10.320 -32.892 27.720 1.00 -1.00 \ ATOM 97 C SER A 19 10.423 -34.133 28.611 1.00 -1.00 \ ATOM 98 O SER A 19 9.492 -34.954 28.661 1.00 -1.00 \ ATOM 99 CB SER A 19 11.022 -33.157 26.371 1.00 -1.00 \ ATOM 100 OG SER A 19 10.863 -34.505 25.951 1.00 -1.00 \ ATOM 101 N GLY A 20 11.556 -34.284 29.292 1.00 -0.06 \ ATOM 102 CA GLY A 20 11.838 -35.498 30.065 1.00 -0.06 \ ATOM 103 C GLY A 20 12.383 -36.643 29.215 1.00 -0.06 \ ATOM 104 O GLY A 20 12.404 -37.806 29.658 1.00 -0.06 \ ATOM 105 N ARG A 21 12.821 -36.303 27.995 1.00 -0.71 \ ATOM 106 CA ARG A 21 13.456 -37.235 27.054 1.00 -0.71 \ ATOM 107 C ARG A 21 15.001 -37.081 27.032 1.00 -0.71 \ ATOM 108 O ARG A 21 15.545 -35.983 27.076 1.00 -0.71 \ ATOM 109 CB ARG A 21 12.913 -36.998 25.631 1.00 -0.71 \ ATOM 110 CG ARG A 21 11.625 -37.694 25.246 1.00 -0.71 \ ATOM 111 CD ARG A 21 11.330 -37.424 23.754 1.00 -0.71 \ ATOM 112 NE ARG A 21 11.014 -36.015 23.460 1.00 -0.71 \ ATOM 113 CZ ARG A 21 11.587 -35.264 22.508 1.00 -0.71 \ ATOM 114 NH1 ARG A 21 12.536 -35.766 21.710 1.00 -0.71 \ ATOM 115 NH2 ARG A 21 11.198 -33.992 22.351 1.00 -0.71 \ ATOM 116 N VAL A 22 15.688 -38.209 26.960 1.00 -0.70 \ ATOM 117 CA VAL A 22 17.140 -38.266 26.815 1.00 -0.70 \ ATOM 118 C VAL A 22 17.551 -37.713 25.436 1.00 -0.70 \ ATOM 119 O VAL A 22 17.142 -38.235 24.385 1.00 -0.70 \ ATOM 120 CB VAL A 22 17.632 -39.751 26.977 1.00 -0.70 \ ATOM 121 CG1 VAL A 22 19.167 -39.889 26.876 1.00 -0.70 \ ATOM 122 CG2 VAL A 22 17.096 -40.381 28.287 1.00 -0.70 \ ATOM 123 N TYR A 23 18.333 -36.640 25.439 1.00 1.43 \ ATOM 124 CA TYR A 23 19.028 -36.231 24.217 1.00 1.43 \ ATOM 125 C TYR A 23 20.505 -36.494 24.396 1.00 1.43 \ ATOM 126 O TYR A 23 20.903 -37.058 25.409 1.00 1.43 \ ATOM 127 CB TYR A 23 18.765 -34.771 23.837 1.00 1.43 \ ATOM 128 CG TYR A 23 19.201 -33.752 24.847 1.00 1.43 \ ATOM 129 CD1 TYR A 23 20.223 -32.880 24.574 1.00 1.43 \ ATOM 130 CD2 TYR A 23 18.562 -33.656 26.070 1.00 1.43 \ ATOM 131 CE1 TYR A 23 20.614 -31.938 25.495 1.00 1.43 \ ATOM 132 CE2 TYR A 23 18.941 -32.743 26.997 1.00 1.43 \ ATOM 133 CZ TYR A 23 19.963 -31.873 26.712 1.00 1.43 \ ATOM 134 OH TYR A 23 20.321 -30.948 27.667 1.00 1.43 \ ATOM 135 N TYR A 24 21.306 -36.090 23.408 1.00 1.92 \ ATOM 136 CA TYR A 24 22.758 -36.200 23.507 1.00 1.92 \ ATOM 137 C TYR A 24 23.411 -34.830 23.264 1.00 1.92 \ ATOM 138 O TYR A 24 22.859 -34.044 22.502 1.00 1.92 \ ATOM 139 CB TYR A 24 23.269 -37.361 22.624 1.00 1.92 \ ATOM 140 CG TYR A 24 22.686 -38.745 23.032 1.00 1.92 \ ATOM 141 CD1 TYR A 24 21.468 -39.210 22.481 1.00 1.92 \ ATOM 142 CD2 TYR A 24 23.347 -39.584 23.975 1.00 1.92 \ ATOM 143 CE1 TYR A 24 20.907 -40.474 22.837 1.00 1.92 \ ATOM 144 CE2 TYR A 24 22.804 -40.856 24.341 1.00 1.92 \ ATOM 145 CZ TYR A 24 21.573 -41.292 23.763 1.00 1.92 \ ATOM 146 OH TYR A 24 20.997 -42.518 24.107 1.00 1.92 \ ATOM 147 N PHE A 25 24.524 -34.527 23.964 1.00 -0.07 \ ATOM 148 CA PHE A 25 25.209 -33.194 23.954 1.00 -0.07 \ ATOM 149 C PHE A 25 26.678 -33.385 23.732 1.00 -0.07 \ ATOM 150 O PHE A 25 27.269 -34.317 24.300 1.00 -0.07 \ ATOM 151 CB PHE A 25 25.045 -32.461 25.287 1.00 -0.07 \ ATOM 152 CG PHE A 25 25.656 -31.064 25.318 1.00 -0.07 \ ATOM 153 CD1 PHE A 25 25.029 -29.983 24.668 1.00 -0.07 \ ATOM 154 CD2 PHE A 25 26.830 -30.803 26.043 1.00 -0.07 \ ATOM 155 CE1 PHE A 25 25.586 -28.663 24.702 1.00 -0.07 \ ATOM 156 CE2 PHE A 25 27.394 -29.506 26.083 1.00 -0.07 \ ATOM 157 CZ PHE A 25 26.770 -28.432 25.405 1.00 -0.07 \ ATOM 158 N ASN A 26 27.292 -32.538 22.905 1.00 1.17 \ ATOM 159 CA ASN A 26 28.741 -32.676 22.671 1.00 1.17 \ ATOM 160 C ASN A 26 29.393 -31.463 23.276 1.00 1.17 \ ATOM 161 O ASN A 26 29.147 -30.372 22.853 1.00 1.17 \ ATOM 162 CB ASN A 26 29.091 -32.794 21.185 1.00 1.17 \ ATOM 163 CG ASN A 26 30.483 -33.378 20.951 1.00 1.17 \ ATOM 164 OD1 ASN A 26 31.495 -32.738 21.207 1.00 1.17 \ ATOM 165 ND2 ASN A 26 30.529 -34.602 20.450 1.00 1.17 \ ATOM 166 N HIS A 27 30.180 -31.652 24.314 1.00 -0.56 \ ATOM 167 CA HIS A 27 30.794 -30.533 24.976 1.00 -0.56 \ ATOM 168 C HIS A 27 31.883 -29.916 24.119 1.00 -0.56 \ ATOM 169 O HIS A 27 32.216 -28.756 24.317 1.00 -0.56 \ ATOM 170 CB HIS A 27 31.327 -30.931 26.361 1.00 -0.56 \ ATOM 171 CG HIS A 27 32.495 -31.885 26.338 1.00 -0.56 \ ATOM 172 ND1 HIS A 27 33.813 -31.460 26.395 1.00 -0.56 \ ATOM 173 CD2 HIS A 27 32.540 -33.240 26.351 1.00 -0.56 \ ATOM 174 CE1 HIS A 27 34.618 -32.514 26.399 1.00 -0.56 \ ATOM 175 NE2 HIS A 27 33.871 -33.608 26.362 1.00 -0.56 \ ATOM 176 N ILE A 28 32.428 -30.679 23.176 1.00 -0.85 \ ATOM 177 CA ILE A 28 33.473 -30.173 22.313 1.00 -0.85 \ ATOM 178 C ILE A 28 32.908 -29.314 21.185 1.00 -0.85 \ ATOM 179 O ILE A 28 33.440 -28.225 20.912 1.00 -0.85 \ ATOM 180 CB ILE A 28 34.402 -31.241 21.729 1.00 -0.85 \ ATOM 181 CG1 ILE A 28 35.078 -32.101 22.821 1.00 -0.85 \ ATOM 182 CG2 ILE A 28 35.479 -30.565 20.842 1.00 -0.85 \ ATOM 183 CD1 ILE A 28 35.913 -33.296 22.212 1.00 -0.85 \ """, "e3kafA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3kafA2_csv", state=0, origin=1) cmd.zoom("e3kafA2_csv", animate=-1)