cmd.read_pdbstr("""\ ATOM 1 N LEU A 7 15.033 -4.779 -4.975 1.00 0.58 \ ATOM 2 CA LEU A 7 16.333 -5.163 -5.658 1.00 0.58 \ ATOM 3 C LEU A 7 16.211 -6.568 -6.197 1.00 0.58 \ ATOM 4 O LEU A 7 15.408 -7.371 -5.671 1.00 0.58 \ ATOM 5 CB LEU A 7 17.489 -5.120 -4.687 1.00 0.58 \ ATOM 6 CG LEU A 7 17.996 -3.777 -4.161 1.00 0.58 \ ATOM 7 CD1 LEU A 7 19.028 -4.013 -3.058 1.00 0.58 \ ATOM 8 CD2 LEU A 7 18.612 -2.974 -5.251 1.00 0.58 \ ATOM 9 N PRO A 8 16.999 -6.891 -7.247 1.00 0.41 \ ATOM 10 CA PRO A 8 16.905 -8.211 -7.876 1.00 0.41 \ ATOM 11 C PRO A 8 17.635 -9.297 -7.060 1.00 0.41 \ ATOM 12 O PRO A 8 18.438 -8.941 -6.152 1.00 0.41 \ ATOM 13 CB PRO A 8 17.544 -8.002 -9.241 1.00 0.41 \ ATOM 14 CG PRO A 8 17.888 -6.516 -9.313 1.00 0.41 \ ATOM 15 CD PRO A 8 17.997 -6.048 -7.915 1.00 0.41 \ ATOM 16 N PRO A 9 17.356 -10.599 -7.362 1.00 -0.79 \ ATOM 17 CA PRO A 9 17.832 -11.698 -6.524 1.00 -0.79 \ ATOM 18 C PRO A 9 19.329 -11.604 -6.223 1.00 -0.79 \ ATOM 19 O PRO A 9 20.150 -11.449 -7.136 1.00 -0.79 \ ATOM 20 CB PRO A 9 17.535 -12.953 -7.367 1.00 -0.79 \ ATOM 21 CG PRO A 9 16.319 -12.555 -8.200 1.00 -0.79 \ ATOM 22 CD PRO A 9 16.627 -11.103 -8.545 1.00 -0.79 \ ATOM 23 N GLY A 10 19.655 -11.687 -4.943 1.00 -0.48 \ ATOM 24 CA GLY A 10 21.053 -11.708 -4.494 1.00 -0.48 \ ATOM 25 C GLY A 10 21.608 -10.343 -4.126 1.00 -0.48 \ ATOM 26 O GLY A 10 22.636 -10.268 -3.468 1.00 -0.48 \ ATOM 27 N TRP A 11 20.959 -9.261 -4.542 1.00 2.12 \ ATOM 28 CA TRP A 11 21.524 -7.924 -4.264 1.00 2.12 \ ATOM 29 C TRP A 11 21.124 -7.386 -2.904 1.00 2.12 \ ATOM 30 O TRP A 11 20.012 -7.602 -2.439 1.00 2.12 \ ATOM 31 CB TRP A 11 21.084 -6.913 -5.320 1.00 2.12 \ ATOM 32 CG TRP A 11 21.695 -7.123 -6.654 1.00 2.12 \ ATOM 33 CD1 TRP A 11 21.155 -7.795 -7.731 1.00 2.12 \ ATOM 34 CD2 TRP A 11 22.966 -6.654 -7.075 1.00 2.12 \ ATOM 35 NE1 TRP A 11 22.021 -7.750 -8.794 1.00 2.12 \ ATOM 36 CE2 TRP A 11 23.142 -7.053 -8.404 1.00 2.12 \ ATOM 37 CE3 TRP A 11 23.986 -5.939 -6.446 1.00 2.12 \ ATOM 38 CZ2 TRP A 11 24.308 -6.755 -9.116 1.00 2.12 \ ATOM 39 CZ3 TRP A 11 25.107 -5.653 -7.142 1.00 2.12 \ ATOM 40 CH2 TRP A 11 25.254 -6.021 -8.474 1.00 2.12 \ ATOM 41 N GLU A 12 22.044 -6.646 -2.304 1.00 -0.42 \ ATOM 42 CA GLU A 12 21.865 -6.011 -1.020 1.00 -0.42 \ ATOM 43 C GLU A 12 22.507 -4.638 -1.093 1.00 -0.42 \ ATOM 44 O GLU A 12 23.449 -4.441 -1.846 1.00 -0.42 \ ATOM 45 CB GLU A 12 22.573 -6.783 0.092 1.00 -0.42 \ ATOM 46 CG GLU A 12 22.110 -8.233 0.301 1.00 -0.42 \ ATOM 47 CD GLU A 12 20.717 -8.366 0.921 1.00 -0.42 \ ATOM 48 OE1 GLU A 12 20.095 -9.458 0.753 1.00 -0.42 \ ATOM 49 OE2 GLU A 12 20.245 -7.385 1.560 1.00 -0.42 \ ATOM 50 N LYS A 13 21.997 -3.710 -0.294 1.00 -0.52 \ ATOM 51 CA LYS A 13 22.538 -2.372 -0.194 1.00 -0.52 \ ATOM 52 C LYS A 13 23.390 -2.366 1.049 1.00 -0.52 \ ATOM 53 O LYS A 13 23.106 -3.073 2.013 1.00 -0.52 \ ATOM 54 CB LYS A 13 21.402 -1.359 -0.067 1.00 -0.52 \ ATOM 55 CG LYS A 13 21.753 0.093 -0.431 1.00 -0.52 \ ATOM 56 CD LYS A 13 20.663 1.139 0.062 1.00 -0.52 \ ATOM 57 CE LYS A 13 19.181 0.795 -0.307 1.00 -0.52 \ ATOM 58 NZ LYS A 13 18.116 1.586 0.476 1.00 -0.52 \ ATOM 59 N ALA A 14 24.459 -1.595 1.032 1.00 -0.61 \ ATOM 60 CA ALA A 14 25.339 -1.520 2.191 1.00 -0.61 \ ATOM 61 C ALA A 14 25.981 -0.132 2.230 1.00 -0.61 \ ATOM 62 O ALA A 14 25.750 0.680 1.349 1.00 -0.61 \ ATOM 63 CB ALA A 14 26.384 -2.599 2.121 1.00 -0.61 \ ATOM 64 N MET A 15 26.817 0.114 3.236 1.00 -0.78 \ ATOM 65 CA MET A 15 27.388 1.432 3.500 1.00 -0.78 \ ATOM 66 C MET A 15 28.899 1.328 3.471 1.00 -0.78 \ ATOM 67 O MET A 15 29.460 0.477 4.142 1.00 -0.78 \ ATOM 68 CB MET A 15 26.932 1.893 4.893 1.00 -0.78 \ ATOM 69 CG MET A 15 27.506 3.210 5.384 1.00 -0.78 \ ATOM 70 SD MET A 15 27.402 4.434 4.078 1.00 -0.78 \ ATOM 71 CE MET A 15 25.648 4.858 4.166 1.00 -0.78 \ ATOM 72 N SER A 16 29.581 2.158 2.691 1.00 -0.03 \ ATOM 73 CA SER A 16 31.029 2.066 2.754 1.00 -0.03 \ ATOM 74 C SER A 16 31.491 3.031 3.815 1.00 -0.03 \ ATOM 75 O SER A 16 31.185 4.208 3.730 1.00 -0.03 \ ATOM 76 CB SER A 16 31.675 2.403 1.427 1.00 -0.03 \ ATOM 77 OG SER A 16 33.028 2.771 1.615 1.00 -0.03 \ ATOM 78 N ARG A 17 32.215 2.533 4.821 1.00 -0.74 \ ATOM 79 CA ARG A 17 32.707 3.399 5.887 1.00 -0.74 \ ATOM 80 C ARG A 17 33.692 4.470 5.362 1.00 -0.74 \ ATOM 81 O ARG A 17 33.515 5.648 5.684 1.00 -0.74 \ ATOM 82 CB ARG A 17 33.259 2.595 7.088 1.00 -0.74 \ ATOM 83 CG ARG A 17 32.671 2.997 8.482 1.00 -0.74 \ ATOM 84 CD ARG A 17 33.457 4.129 9.262 1.00 -0.74 \ ATOM 85 NE ARG A 17 32.525 5.194 9.666 1.00 -0.74 \ ATOM 86 CZ ARG A 17 32.753 6.222 10.493 1.00 -0.74 \ ATOM 87 NH1 ARG A 17 33.915 6.413 11.121 1.00 -0.74 \ ATOM 88 NH2 ARG A 17 31.770 7.088 10.677 1.00 -0.74 \ ATOM 89 N SER A 18 34.669 4.083 4.537 1.00 -0.74 \ ATOM 90 CA SER A 18 35.712 5.038 4.069 1.00 -0.74 \ ATOM 91 C SER A 18 35.189 6.220 3.275 1.00 -0.74 \ ATOM 92 O SER A 18 35.676 7.362 3.444 1.00 -0.74 \ ATOM 93 CB SER A 18 36.756 4.360 3.194 1.00 -0.74 \ ATOM 94 OG SER A 18 36.491 2.987 3.065 1.00 -0.74 \ ATOM 95 N SER A 19 34.225 5.936 2.403 1.00 -1.00 \ ATOM 96 CA SER A 19 33.598 6.931 1.533 1.00 -1.00 \ ATOM 97 C SER A 19 32.394 7.656 2.146 1.00 -1.00 \ ATOM 98 O SER A 19 32.130 8.814 1.819 1.00 -1.00 \ ATOM 99 CB SER A 19 33.128 6.272 0.225 1.00 -1.00 \ ATOM 100 OG SER A 19 34.094 5.353 -0.275 1.00 -1.00 \ ATOM 101 N GLY A 20 31.625 6.960 2.975 1.00 -0.06 \ ATOM 102 CA GLY A 20 30.343 7.494 3.421 1.00 -0.06 \ ATOM 103 C GLY A 20 29.215 7.326 2.413 1.00 -0.06 \ ATOM 104 O GLY A 20 28.135 7.885 2.595 1.00 -0.06 \ ATOM 105 N ARG A 21 29.436 6.553 1.352 1.00 -0.71 \ ATOM 106 CA ARG A 21 28.387 6.377 0.322 1.00 -0.71 \ ATOM 107 C ARG A 21 27.877 4.932 0.319 1.00 -0.71 \ ATOM 108 O ARG A 21 28.656 4.010 0.605 1.00 -0.71 \ ATOM 109 CB ARG A 21 28.954 6.670 -1.058 1.00 -0.71 \ ATOM 110 CG ARG A 21 29.200 8.106 -1.370 1.00 -0.71 \ ATOM 111 CD ARG A 21 29.861 8.153 -2.734 1.00 -0.71 \ ATOM 112 NE ARG A 21 31.241 7.644 -2.737 1.00 -0.71 \ ATOM 113 CZ ARG A 21 31.784 6.953 -3.742 1.00 -0.71 \ ATOM 114 NH1 ARG A 21 31.089 6.637 -4.841 1.00 -0.71 \ ATOM 115 NH2 ARG A 21 33.043 6.572 -3.641 1.00 -0.71 \ ATOM 116 N VAL A 22 26.594 4.727 0.009 1.00 -0.70 \ ATOM 117 CA VAL A 22 26.110 3.356 -0.131 1.00 -0.70 \ ATOM 118 C VAL A 22 26.684 2.705 -1.404 1.00 -0.70 \ ATOM 119 O VAL A 22 27.121 3.393 -2.311 1.00 -0.70 \ ATOM 120 CB VAL A 22 24.593 3.214 -0.055 1.00 -0.70 \ ATOM 121 CG1 VAL A 22 24.065 3.782 1.274 1.00 -0.70 \ ATOM 122 CG2 VAL A 22 23.899 3.825 -1.260 1.00 -0.70 \ ATOM 123 N TYR A 23 26.734 1.382 -1.421 1.00 1.43 \ ATOM 124 CA TYR A 23 27.068 0.626 -2.610 1.00 1.43 \ ATOM 125 C TYR A 23 26.210 -0.625 -2.592 1.00 1.43 \ ATOM 126 O TYR A 23 25.472 -0.835 -1.639 1.00 1.43 \ ATOM 127 CB TYR A 23 28.557 0.283 -2.617 1.00 1.43 \ ATOM 128 CG TYR A 23 28.986 -0.634 -1.498 1.00 1.43 \ ATOM 129 CD1 TYR A 23 29.041 -2.000 -1.695 1.00 1.43 \ ATOM 130 CD2 TYR A 23 29.391 -0.136 -0.261 1.00 1.43 \ ATOM 131 CE1 TYR A 23 29.463 -2.873 -0.710 1.00 1.43 \ ATOM 132 CE2 TYR A 23 29.835 -1.017 0.755 1.00 1.43 \ ATOM 133 CZ TYR A 23 29.846 -2.396 0.508 1.00 1.43 \ ATOM 134 OH TYR A 23 30.251 -3.312 1.472 1.00 1.43 \ ATOM 135 N TYR A 24 26.314 -1.460 -3.617 1.00 1.92 \ ATOM 136 CA TYR A 24 25.503 -2.663 -3.720 1.00 1.92 \ ATOM 137 C TYR A 24 26.394 -3.847 -3.954 1.00 1.92 \ ATOM 138 O TYR A 24 27.470 -3.727 -4.578 1.00 1.92 \ ATOM 139 CB TYR A 24 24.525 -2.528 -4.869 1.00 1.92 \ ATOM 140 CG TYR A 24 23.605 -1.338 -4.693 1.00 1.92 \ ATOM 141 CD1 TYR A 24 24.088 -0.015 -4.817 1.00 1.92 \ ATOM 142 CD2 TYR A 24 22.248 -1.532 -4.405 1.00 1.92 \ ATOM 143 CE1 TYR A 24 23.247 1.077 -4.633 1.00 1.92 \ ATOM 144 CE2 TYR A 24 21.401 -0.467 -4.231 1.00 1.92 \ ATOM 145 CZ TYR A 24 21.894 0.845 -4.339 1.00 1.92 \ ATOM 146 OH TYR A 24 21.017 1.896 -4.144 1.00 1.92 \ ATOM 147 N PHE A 25 25.979 -4.999 -3.454 1.00 -0.07 \ ATOM 148 CA PHE A 25 26.758 -6.224 -3.690 1.00 -0.07 \ ATOM 149 C PHE A 25 25.805 -7.401 -3.839 1.00 -0.07 \ ATOM 150 O PHE A 25 24.734 -7.434 -3.239 1.00 -0.07 \ ATOM 151 CB PHE A 25 27.785 -6.479 -2.575 1.00 -0.07 \ ATOM 152 CG PHE A 25 27.171 -6.867 -1.272 1.00 -0.07 \ ATOM 153 CD1 PHE A 25 26.738 -5.877 -0.352 1.00 -0.07 \ ATOM 154 CD2 PHE A 25 27.009 -8.207 -0.934 1.00 -0.07 \ ATOM 155 CE1 PHE A 25 26.121 -6.221 0.894 1.00 -0.07 \ ATOM 156 CE2 PHE A 25 26.386 -8.554 0.312 1.00 -0.07 \ ATOM 157 CZ PHE A 25 25.944 -7.553 1.212 1.00 -0.07 \ ATOM 158 N ASN A 26 26.204 -8.382 -4.633 1.00 1.17 \ ATOM 159 CA ASN A 26 25.360 -9.520 -4.834 1.00 1.17 \ ATOM 160 C ASN A 26 26.134 -10.637 -4.159 1.00 1.17 \ ATOM 161 O ASN A 26 27.303 -10.872 -4.489 1.00 1.17 \ ATOM 162 CB ASN A 26 25.138 -9.726 -6.324 1.00 1.17 \ ATOM 163 CG ASN A 26 24.134 -10.787 -6.632 1.00 1.17 \ ATOM 164 OD1 ASN A 26 24.277 -11.968 -6.228 1.00 1.17 \ ATOM 165 ND2 ASN A 26 23.091 -10.393 -7.365 1.00 1.17 \ ATOM 166 N HIS A 27 25.507 -11.327 -3.209 1.00 -0.56 \ ATOM 167 CA HIS A 27 26.215 -12.390 -2.523 1.00 -0.56 \ ATOM 168 C HIS A 27 26.178 -13.717 -3.276 1.00 -0.56 \ ATOM 169 O HIS A 27 26.811 -14.656 -2.830 1.00 -0.56 \ ATOM 170 CB HIS A 27 25.690 -12.600 -1.108 1.00 -0.56 \ ATOM 171 CG HIS A 27 24.207 -12.743 -1.040 1.00 -0.56 \ ATOM 172 ND1 HIS A 27 23.549 -13.861 -1.507 1.00 -0.56 \ ATOM 173 CD2 HIS A 27 23.256 -11.918 -0.527 1.00 -0.56 \ ATOM 174 CE1 HIS A 27 22.253 -13.704 -1.304 1.00 -0.56 \ ATOM 175 NE2 HIS A 27 22.051 -12.526 -0.727 1.00 -0.56 \ ATOM 176 N ILE A 28 25.406 -13.798 -4.373 1.00 -0.85 \ ATOM 177 CA ILE A 28 25.456 -14.967 -5.253 1.00 -0.85 \ ATOM 178 C ILE A 28 26.565 -14.866 -6.321 1.00 -0.85 \ ATOM 179 O ILE A 28 27.279 -15.843 -6.545 1.00 -0.85 \ ATOM 180 CB ILE A 28 24.125 -15.215 -5.931 1.00 -0.85 \ ATOM 181 CG1 ILE A 28 23.007 -15.270 -4.880 1.00 -0.85 \ ATOM 182 CG2 ILE A 28 24.172 -16.518 -6.761 1.00 -0.85 \ ATOM 183 CD1 ILE A 28 21.649 -15.376 -5.508 1.00 -0.85 \ """, "e3kahA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3kahA2_csv", state=0, origin=1) cmd.zoom("e3kahA2_csv", animate=-1)