cmd.read_pdbstr("""\ ATOM 1 N LEU A 7 29.090 -43.575 21.686 1.00 0.58 \ ATOM 2 CA LEU A 7 29.722 -42.580 22.563 1.00 0.58 \ ATOM 3 C LEU A 7 31.120 -42.107 22.069 1.00 0.58 \ ATOM 4 O LEU A 7 32.016 -41.782 22.862 1.00 0.58 \ ATOM 5 CB LEU A 7 29.660 -43.012 24.045 1.00 0.58 \ ATOM 6 CG LEU A 7 29.951 -44.381 24.657 1.00 0.58 \ ATOM 7 CD1 LEU A 7 31.481 -44.740 24.621 1.00 0.58 \ ATOM 8 CD2 LEU A 7 29.395 -44.391 26.122 1.00 0.58 \ ATOM 9 N PRO A 8 31.244 -41.956 20.733 1.00 0.41 \ ATOM 10 CA PRO A 8 32.334 -41.277 19.968 1.00 0.41 \ ATOM 11 C PRO A 8 32.981 -39.989 20.618 1.00 0.41 \ ATOM 12 O PRO A 8 32.393 -39.368 21.550 1.00 0.41 \ ATOM 13 CB PRO A 8 31.668 -40.920 18.610 1.00 0.41 \ ATOM 14 CG PRO A 8 30.190 -41.245 18.781 1.00 0.41 \ ATOM 15 CD PRO A 8 30.100 -42.285 19.863 1.00 0.41 \ ATOM 16 N PRO A 9 34.193 -39.589 20.131 1.00 -0.79 \ ATOM 17 CA PRO A 9 34.869 -38.517 20.934 1.00 -0.79 \ ATOM 18 C PRO A 9 33.903 -37.382 21.431 1.00 -0.79 \ ATOM 19 O PRO A 9 33.476 -36.533 20.574 1.00 -0.79 \ ATOM 20 CB PRO A 9 35.987 -37.975 19.978 1.00 -0.79 \ ATOM 21 CG PRO A 9 36.342 -39.241 19.052 1.00 -0.79 \ ATOM 22 CD PRO A 9 35.028 -40.099 19.003 1.00 -0.79 \ ATOM 23 N GLY A 10 33.541 -37.437 22.750 1.00 -0.48 \ ATOM 24 CA GLY A 10 32.968 -36.286 23.505 1.00 -0.48 \ ATOM 25 C GLY A 10 31.454 -36.154 23.778 1.00 -0.48 \ ATOM 26 O GLY A 10 30.942 -35.048 24.054 1.00 -0.48 \ ATOM 27 N TRP A 11 30.759 -37.282 23.686 1.00 2.12 \ ATOM 28 CA TRP A 11 29.303 -37.329 23.728 1.00 2.12 \ ATOM 29 C TRP A 11 28.877 -37.795 25.096 1.00 2.12 \ ATOM 30 O TRP A 11 29.518 -38.663 25.680 1.00 2.12 \ ATOM 31 CB TRP A 11 28.736 -38.254 22.632 1.00 2.12 \ ATOM 32 CG TRP A 11 28.697 -37.684 21.216 1.00 2.12 \ ATOM 33 CD1 TRP A 11 29.550 -37.969 20.204 1.00 2.12 \ ATOM 34 CD2 TRP A 11 27.721 -36.791 20.663 1.00 2.12 \ ATOM 35 NE1 TRP A 11 29.216 -37.266 19.068 1.00 2.12 \ ATOM 36 CE2 TRP A 11 28.073 -36.561 19.308 1.00 2.12 \ ATOM 37 CE3 TRP A 11 26.602 -36.126 21.189 1.00 2.12 \ ATOM 38 CZ2 TRP A 11 27.338 -35.701 18.465 1.00 2.12 \ ATOM 39 CZ3 TRP A 11 25.885 -35.289 20.377 1.00 2.12 \ ATOM 40 CH2 TRP A 11 26.243 -35.068 19.013 1.00 2.12 \ ATOM 41 N GLU A 12 27.832 -37.170 25.629 1.00 -0.42 \ ATOM 42 CA GLU A 12 27.243 -37.563 26.891 1.00 -0.42 \ ATOM 43 C GLU A 12 25.722 -37.564 26.687 1.00 -0.42 \ ATOM 44 O GLU A 12 25.221 -36.913 25.784 1.00 -0.42 \ ATOM 45 CB GLU A 12 27.626 -36.591 28.044 1.00 -0.42 \ ATOM 46 CG GLU A 12 26.654 -35.335 28.205 1.00 -0.42 \ ATOM 47 CD GLU A 12 27.189 -34.106 29.003 1.00 -0.42 \ ATOM 48 OE1 GLU A 12 28.348 -33.633 28.809 1.00 -0.42 \ ATOM 49 OE2 GLU A 12 26.398 -33.580 29.809 1.00 -0.42 \ ATOM 50 N LYS A 13 25.001 -38.239 27.570 1.00 -0.52 \ ATOM 51 CA LYS A 13 23.547 -38.301 27.524 1.00 -0.52 \ ATOM 52 C LYS A 13 23.027 -37.266 28.505 1.00 -0.52 \ ATOM 53 O LYS A 13 23.545 -37.103 29.603 1.00 -0.52 \ ATOM 54 CB LYS A 13 23.068 -39.743 27.866 1.00 -0.52 \ ATOM 55 CG LYS A 13 21.545 -39.919 28.142 1.00 -0.52 \ ATOM 56 CD LYS A 13 21.184 -41.292 28.814 1.00 -0.52 \ ATOM 57 CE LYS A 13 20.799 -42.391 27.748 1.00 -0.52 \ ATOM 58 NZ LYS A 13 19.541 -43.247 28.143 1.00 -0.52 \ ATOM 59 N ALA A 14 22.012 -36.544 28.103 1.00 -0.61 \ ATOM 60 CA ALA A 14 21.470 -35.520 28.944 1.00 -0.61 \ ATOM 61 C ALA A 14 19.960 -35.692 28.915 1.00 -0.61 \ ATOM 62 O ALA A 14 19.440 -36.555 28.220 1.00 -0.61 \ ATOM 63 CB ALA A 14 21.864 -34.156 28.443 1.00 -0.61 \ ATOM 64 N MET A 15 19.278 -34.835 29.660 1.00 -0.78 \ ATOM 65 CA MET A 15 17.844 -34.887 29.773 1.00 -0.78 \ ATOM 66 C MET A 15 17.299 -33.534 29.420 1.00 -0.78 \ ATOM 67 O MET A 15 17.735 -32.510 29.995 1.00 -0.78 \ ATOM 68 CB MET A 15 17.489 -35.242 31.222 1.00 -0.78 \ ATOM 69 CG MET A 15 16.028 -35.721 31.416 1.00 -0.78 \ ATOM 70 SD MET A 15 15.907 -37.501 31.800 1.00 -0.78 \ ATOM 71 CE MET A 15 17.234 -38.306 30.846 1.00 -0.78 \ ATOM 72 N SER A 16 16.349 -33.502 28.480 1.00 -0.03 \ ATOM 73 CA SER A 16 15.732 -32.231 28.119 1.00 -0.03 \ ATOM 74 C SER A 16 15.087 -31.566 29.343 1.00 -0.03 \ ATOM 75 O SER A 16 14.393 -32.223 30.126 1.00 -0.03 \ ATOM 76 CB SER A 16 14.666 -32.376 27.052 1.00 -0.03 \ ATOM 77 OG SER A 16 14.241 -31.063 26.726 1.00 -0.03 \ ATOM 78 N ARG A 17 15.342 -30.276 29.499 1.00 -0.74 \ ATOM 79 CA ARG A 17 14.772 -29.522 30.612 1.00 -0.74 \ ATOM 80 C ARG A 17 13.307 -29.144 30.328 1.00 -0.74 \ ATOM 81 O ARG A 17 12.461 -29.113 31.245 1.00 -0.74 \ ATOM 82 CB ARG A 17 15.624 -28.301 30.943 1.00 -0.74 \ ATOM 83 CG ARG A 17 15.263 -27.683 32.263 1.00 -0.74 \ ATOM 84 CD ARG A 17 16.459 -27.194 33.015 1.00 -0.74 \ ATOM 85 NE ARG A 17 17.488 -28.236 33.106 1.00 -0.74 \ ATOM 86 CZ ARG A 17 18.712 -27.979 33.557 1.00 -0.74 \ ATOM 87 NH1 ARG A 17 18.969 -26.729 33.977 1.00 -0.74 \ ATOM 88 NH2 ARG A 17 19.639 -28.942 33.594 1.00 -0.74 \ ATOM 89 N SER A 18 13.005 -28.900 29.055 1.00 -0.74 \ ATOM 90 CA SER A 18 11.617 -28.706 28.601 1.00 -0.74 \ ATOM 91 C SER A 18 10.727 -29.933 28.711 1.00 -0.74 \ ATOM 92 O SER A 18 9.622 -29.844 29.239 1.00 -0.74 \ ATOM 93 CB SER A 18 11.599 -28.249 27.137 1.00 -0.74 \ ATOM 94 OG SER A 18 12.022 -26.915 27.043 1.00 -0.74 \ ATOM 95 N SER A 19 11.213 -31.073 28.226 1.00 -1.00 \ ATOM 96 CA SER A 19 10.370 -32.219 27.978 1.00 -1.00 \ ATOM 97 C SER A 19 10.704 -33.455 28.738 1.00 -1.00 \ ATOM 98 O SER A 19 9.863 -34.340 28.813 1.00 -1.00 \ ATOM 99 CB SER A 19 10.361 -32.575 26.476 1.00 -1.00 \ ATOM 100 OG SER A 19 11.655 -32.564 25.891 1.00 -1.00 \ ATOM 101 N GLY A 20 11.917 -33.565 29.284 1.00 -0.06 \ ATOM 102 CA GLY A 20 12.309 -34.807 29.986 1.00 -0.06 \ ATOM 103 C GLY A 20 12.773 -35.946 29.052 1.00 -0.06 \ ATOM 104 O GLY A 20 13.140 -37.051 29.484 1.00 -0.06 \ ATOM 105 N ARG A 21 12.804 -35.690 27.754 1.00 -0.71 \ ATOM 106 CA ARG A 21 13.380 -36.712 26.880 1.00 -0.71 \ ATOM 107 C ARG A 21 14.921 -36.635 26.830 1.00 -0.71 \ ATOM 108 O ARG A 21 15.514 -35.546 26.872 1.00 -0.71 \ ATOM 109 CB ARG A 21 12.747 -36.663 25.486 1.00 -0.71 \ ATOM 110 CG ARG A 21 12.176 -38.061 24.985 1.00 -0.71 \ ATOM 111 CD ARG A 21 11.618 -37.891 23.540 1.00 -0.71 \ ATOM 112 NE ARG A 21 11.332 -36.463 23.398 1.00 -0.71 \ ATOM 113 CZ ARG A 21 11.833 -35.608 22.504 1.00 -0.71 \ ATOM 114 NH1 ARG A 21 12.617 -35.991 21.473 1.00 -0.71 \ ATOM 115 NH2 ARG A 21 11.440 -34.335 22.621 1.00 -0.71 \ ATOM 116 N VAL A 22 15.516 -37.818 26.858 1.00 -0.70 \ ATOM 117 CA VAL A 22 16.930 -38.073 26.620 1.00 -0.70 \ ATOM 118 C VAL A 22 17.397 -37.378 25.305 1.00 -0.70 \ ATOM 119 O VAL A 22 16.699 -37.425 24.281 1.00 -0.70 \ ATOM 120 CB VAL A 22 17.143 -39.616 26.514 1.00 -0.70 \ ATOM 121 CG1 VAL A 22 18.564 -40.020 26.036 1.00 -0.70 \ ATOM 122 CG2 VAL A 22 16.757 -40.321 27.883 1.00 -0.70 \ ATOM 123 N TYR A 23 18.548 -36.700 25.362 1.00 1.43 \ ATOM 124 CA TYR A 23 19.202 -36.169 24.140 1.00 1.43 \ ATOM 125 C TYR A 23 20.677 -36.388 24.348 1.00 1.43 \ ATOM 126 O TYR A 23 21.068 -36.915 25.379 1.00 1.43 \ ATOM 127 CB TYR A 23 18.816 -34.704 23.853 1.00 1.43 \ ATOM 128 CG TYR A 23 19.400 -33.686 24.781 1.00 1.43 \ ATOM 129 CD1 TYR A 23 20.568 -32.980 24.436 1.00 1.43 \ ATOM 130 CD2 TYR A 23 18.763 -33.371 25.979 1.00 1.43 \ ATOM 131 CE1 TYR A 23 21.134 -32.022 25.305 1.00 1.43 \ ATOM 132 CE2 TYR A 23 19.275 -32.415 26.837 1.00 1.43 \ ATOM 133 CZ TYR A 23 20.477 -31.770 26.514 1.00 1.43 \ ATOM 134 OH TYR A 23 20.976 -30.846 27.388 1.00 1.43 \ ATOM 135 N TYR A 24 21.488 -35.975 23.384 1.00 1.92 \ ATOM 136 CA TYR A 24 22.898 -36.222 23.385 1.00 1.92 \ ATOM 137 C TYR A 24 23.596 -34.915 23.179 1.00 1.92 \ ATOM 138 O TYR A 24 23.163 -34.081 22.401 1.00 1.92 \ ATOM 139 CB TYR A 24 23.252 -37.295 22.341 1.00 1.92 \ ATOM 140 CG TYR A 24 22.644 -38.612 22.783 1.00 1.92 \ ATOM 141 CD1 TYR A 24 21.335 -38.976 22.395 1.00 1.92 \ ATOM 142 CD2 TYR A 24 23.327 -39.452 23.687 1.00 1.92 \ ATOM 143 CE1 TYR A 24 20.720 -40.182 22.840 1.00 1.92 \ ATOM 144 CE2 TYR A 24 22.749 -40.654 24.153 1.00 1.92 \ ATOM 145 CZ TYR A 24 21.449 -41.025 23.715 1.00 1.92 \ ATOM 146 OH TYR A 24 20.893 -42.218 24.183 1.00 1.92 \ ATOM 147 N PHE A 25 24.663 -34.711 23.923 1.00 -0.07 \ ATOM 148 CA PHE A 25 25.376 -33.444 23.862 1.00 -0.07 \ ATOM 149 C PHE A 25 26.855 -33.699 23.662 1.00 -0.07 \ ATOM 150 O PHE A 25 27.394 -34.640 24.257 1.00 -0.07 \ ATOM 151 CB PHE A 25 25.184 -32.689 25.173 1.00 -0.07 \ ATOM 152 CG PHE A 25 26.047 -31.496 25.271 1.00 -0.07 \ ATOM 153 CD1 PHE A 25 25.825 -30.393 24.380 1.00 -0.07 \ ATOM 154 CD2 PHE A 25 27.111 -31.450 26.179 1.00 -0.07 \ ATOM 155 CE1 PHE A 25 26.622 -29.207 24.441 1.00 -0.07 \ ATOM 156 CE2 PHE A 25 27.956 -30.236 26.249 1.00 -0.07 \ ATOM 157 CZ PHE A 25 27.695 -29.114 25.360 1.00 -0.07 \ ATOM 158 N ASN A 26 27.521 -32.874 22.855 1.00 1.17 \ ATOM 159 CA ASN A 26 28.945 -33.104 22.569 1.00 1.17 \ ATOM 160 C ASN A 26 29.679 -31.920 23.119 1.00 1.17 \ ATOM 161 O ASN A 26 29.496 -30.838 22.631 1.00 1.17 \ ATOM 162 CB ASN A 26 29.288 -33.282 21.046 1.00 1.17 \ ATOM 163 CG ASN A 26 30.785 -33.695 20.841 1.00 1.17 \ ATOM 164 OD1 ASN A 26 31.650 -32.977 21.222 1.00 1.17 \ ATOM 165 ND2 ASN A 26 31.050 -34.865 20.309 1.00 1.17 \ ATOM 166 N HIS A 27 30.530 -32.133 24.115 1.00 -0.56 \ ATOM 167 CA HIS A 27 31.186 -31.024 24.798 1.00 -0.56 \ ATOM 168 C HIS A 27 32.406 -30.533 24.003 1.00 -0.56 \ ATOM 169 O HIS A 27 32.996 -29.526 24.344 1.00 -0.56 \ ATOM 170 CB HIS A 27 31.555 -31.459 26.247 1.00 -0.56 \ ATOM 171 CG HIS A 27 32.724 -32.417 26.335 1.00 -0.56 \ ATOM 172 ND1 HIS A 27 32.561 -33.778 26.492 1.00 -0.56 \ ATOM 173 CD2 HIS A 27 34.065 -32.199 26.312 1.00 -0.56 \ ATOM 174 CE1 HIS A 27 33.744 -34.363 26.540 1.00 -0.56 \ ATOM 175 NE2 HIS A 27 34.674 -33.427 26.452 1.00 -0.56 \ ATOM 176 N ILE A 28 32.742 -31.188 22.906 1.00 -0.85 \ ATOM 177 CA ILE A 28 33.867 -30.712 22.069 1.00 -0.85 \ ATOM 178 C ILE A 28 33.335 -29.771 20.948 1.00 -0.85 \ ATOM 179 O ILE A 28 33.960 -28.760 20.638 1.00 -0.85 \ ATOM 180 CB ILE A 28 34.740 -31.886 21.528 1.00 -0.85 \ ATOM 181 CG1 ILE A 28 35.313 -32.728 22.669 1.00 -0.85 \ ATOM 182 CG2 ILE A 28 35.854 -31.380 20.543 1.00 -0.85 \ ATOM 183 CD1 ILE A 28 35.605 -34.152 22.226 1.00 -0.85 \ """, "e3kaiA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3kaiA2_csv", state=0, origin=1) cmd.zoom("e3kaiA2_csv", animate=-1)