cmd.read_pdbstr("""\ ATOM 1 N TYR H 23 4.378 -95.889 111.289 1.00 0.69 \ ATOM 2 CA TYR H 23 3.872 -95.580 109.953 1.00 0.69 \ ATOM 3 C TYR H 23 4.759 -94.597 109.194 1.00 0.69 \ ATOM 4 O TYR H 23 4.921 -94.715 107.979 1.00 0.69 \ ATOM 5 CB TYR H 23 2.448 -95.024 110.018 1.00 0.69 \ ATOM 6 CG TYR H 23 1.405 -95.972 109.481 1.00 0.69 \ ATOM 7 CD1 TYR H 23 0.203 -96.165 110.150 1.00 0.69 \ ATOM 8 CD2 TYR H 23 1.627 -96.687 108.314 1.00 0.69 \ ATOM 9 CE1 TYR H 23 -0.752 -97.037 109.667 1.00 0.69 \ ATOM 10 CE2 TYR H 23 0.679 -97.562 107.824 1.00 0.69 \ ATOM 11 CZ TYR H 23 -0.509 -97.734 108.505 1.00 0.69 \ ATOM 12 OH TYR H 23 -1.453 -98.607 108.014 1.00 0.69 \ ATOM 13 N GLU H 24 5.314 -93.622 109.910 1.00 0.63 \ ATOM 14 CA GLU H 24 6.196 -92.621 109.309 1.00 0.63 \ ATOM 15 C GLU H 24 7.325 -93.286 108.536 1.00 0.63 \ ATOM 16 O GLU H 24 7.831 -92.740 107.555 1.00 0.63 \ ATOM 17 CB GLU H 24 6.802 -91.720 110.387 1.00 0.63 \ ATOM 18 CG GLU H 24 5.796 -90.962 111.235 1.00 0.63 \ ATOM 19 CD GLU H 24 6.460 -90.179 112.352 1.00 0.63 \ ATOM 20 OE1 GLU H 24 7.635 -90.470 112.662 1.00 0.63 \ ATOM 21 OE2 GLU H 24 5.810 -89.277 112.921 1.00 0.63 \ ATOM 22 N THR H 25 7.718 -94.468 108.999 1.00 -1.53 \ ATOM 23 CA THR H 25 8.842 -95.197 108.424 1.00 -1.53 \ ATOM 24 C THR H 25 8.442 -96.035 107.207 1.00 -1.53 \ ATOM 25 O THR H 25 9.295 -96.640 106.556 1.00 -1.53 \ ATOM 26 CB THR H 25 9.515 -96.100 109.480 1.00 -1.53 \ ATOM 27 OG1 THR H 25 8.523 -96.909 110.126 1.00 -1.53 \ ATOM 28 CG2 THR H 25 10.220 -95.255 110.528 1.00 -1.53 \ ATOM 29 N VAL H 26 7.147 -96.067 106.903 1.00 0.05 \ ATOM 30 CA VAL H 26 6.653 -96.808 105.746 1.00 0.05 \ ATOM 31 C VAL H 26 6.401 -95.869 104.568 1.00 0.05 \ ATOM 32 O VAL H 26 6.605 -96.242 103.411 1.00 0.05 \ ATOM 33 CB VAL H 26 5.347 -97.564 106.060 1.00 0.05 \ ATOM 34 CG1 VAL H 26 5.190 -98.751 105.120 1.00 0.05 \ ATOM 35 CG2 VAL H 26 5.329 -98.019 107.510 1.00 0.05 \ ATOM 36 N ARG H 27 5.954 -94.652 104.876 1.00 1.41 \ ATOM 37 CA ARG H 27 5.654 -93.645 103.856 1.00 1.41 \ ATOM 38 C ARG H 27 6.917 -93.228 103.105 1.00 1.41 \ ATOM 39 O ARG H 27 6.904 -93.089 101.883 1.00 1.41 \ ATOM 40 CB ARG H 27 4.973 -92.424 104.488 1.00 1.41 \ ATOM 41 CG ARG H 27 3.786 -92.774 105.380 1.00 1.41 \ ATOM 42 CD ARG H 27 3.224 -91.557 106.101 1.00 1.41 \ ATOM 43 NE ARG H 27 2.346 -90.763 105.248 1.00 1.41 \ ATOM 44 CZ ARG H 27 1.632 -89.729 105.676 1.00 1.41 \ ATOM 45 NH1 ARG H 27 1.690 -89.362 106.949 1.00 1.41 \ ATOM 46 NH2 ARG H 27 0.858 -89.063 104.833 1.00 1.41 \ ATOM 47 N ASN H 28 8.004 -93.032 103.845 1.00 -0.32 \ ATOM 48 CA ASN H 28 9.300 -92.749 103.242 1.00 -0.32 \ ATOM 49 C ASN H 28 9.951 -94.027 102.715 1.00 -0.32 \ ATOM 50 O ASN H 28 11.099 -94.015 102.269 1.00 -0.32 \ ATOM 51 CB ASN H 28 10.227 -92.061 104.249 1.00 -0.32 \ ATOM 52 CG ASN H 28 9.703 -90.710 104.702 1.00 -0.32 \ ATOM 53 OD1 ASN H 28 9.479 -89.810 103.890 1.00 -0.32 \ ATOM 54 ND2 ASN H 28 9.516 -90.559 106.009 1.00 -0.32 \ ATOM 55 N GLY H 29 9.209 -95.129 102.771 1.00 0.64 \ ATOM 56 CA GLY H 29 9.710 -96.415 102.319 1.00 0.64 \ ATOM 57 C GLY H 29 9.248 -96.768 100.919 1.00 0.64 \ ATOM 58 O GLY H 29 10.000 -97.342 100.132 1.00 0.64 \ ATOM 59 N GLY H 30 8.002 -96.426 100.610 1.00 2.76 \ ATOM 60 CA GLY H 30 7.446 -96.682 99.294 1.00 2.76 \ ATOM 61 C GLY H 30 7.822 -95.618 98.281 1.00 2.76 \ ATOM 62 O GLY H 30 7.867 -95.884 97.081 1.00 2.76 \ ATOM 63 N LEU H 31 8.097 -94.409 98.763 1.00 0.68 \ ATOM 64 CA LEU H 31 8.465 -93.301 97.884 1.00 0.68 \ ATOM 65 C LEU H 31 9.829 -93.518 97.217 1.00 0.68 \ ATOM 66 O LEU H 31 10.214 -92.772 96.314 1.00 0.68 \ ATOM 67 CB LEU H 31 8.458 -91.965 98.644 1.00 0.68 \ ATOM 68 CG LEU H 31 7.183 -91.487 99.349 1.00 0.68 \ ATOM 69 CD1 LEU H 31 7.355 -90.050 99.814 1.00 0.68 \ ATOM 70 CD2 LEU H 31 5.966 -91.602 98.455 1.00 0.68 \ ATOM 71 N ILE H 32 10.550 -94.546 97.655 1.00 0.68 \ ATOM 72 CA ILE H 32 11.895 -94.803 97.140 1.00 0.68 \ ATOM 73 C ILE H 32 11.934 -95.871 96.040 1.00 0.68 \ ATOM 74 O ILE H 32 12.337 -95.582 94.918 1.00 0.68 \ ATOM 75 CB ILE H 32 12.884 -95.160 98.272 1.00 0.68 \ ATOM 76 CG1 ILE H 32 12.905 -94.055 99.332 1.00 0.68 \ ATOM 77 CG2 ILE H 32 14.280 -95.389 97.705 1.00 0.68 \ ATOM 78 CD1 ILE H 32 13.359 -92.711 98.807 1.00 0.68 \ ATOM 79 N PHE H 33 11.523 -97.098 96.355 1.00 -0.39 \ ATOM 80 CA PHE H 33 11.495 -98.163 95.351 1.00 -0.39 \ ATOM 81 C PHE H 33 10.490 -97.842 94.256 1.00 -0.39 \ ATOM 82 O PHE H 33 10.421 -98.530 93.236 1.00 -0.39 \ ATOM 83 CB PHE H 33 11.180 -99.522 95.977 1.00 -0.39 \ ATOM 84 CG PHE H 33 12.321-100.110 96.762 1.00 -0.39 \ ATOM 85 CD1 PHE H 33 13.430-100.629 96.114 1.00 -0.39 \ ATOM 86 CD2 PHE H 33 12.279-100.153 98.149 1.00 -0.39 \ ATOM 87 CE1 PHE H 33 14.480-101.174 96.833 1.00 -0.39 \ ATOM 88 CE2 PHE H 33 13.324-100.698 98.875 1.00 -0.39 \ ATOM 89 CZ PHE H 33 14.426-101.209 98.215 1.00 -0.39 \ ATOM 90 N ALA H 34 9.701 -96.798 94.484 1.00 0.09 \ ATOM 91 CA ALA H 34 8.840 -96.253 93.444 1.00 0.09 \ ATOM 92 C ALA H 34 9.655 -95.325 92.548 1.00 0.09 \ ATOM 93 O ALA H 34 9.694 -95.498 91.331 1.00 0.09 \ ATOM 94 CB ALA H 34 7.671 -95.503 94.057 1.00 0.09 \ ATOM 95 N ALA H 35 10.315 -94.348 93.165 1.00 0.30 \ ATOM 96 CA ALA H 35 11.107 -93.361 92.432 1.00 0.30 \ ATOM 97 C ALA H 35 12.294 -93.979 91.692 1.00 0.30 \ ATOM 98 O ALA H 35 12.798 -93.402 90.730 1.00 0.30 \ ATOM 99 CB ALA H 35 11.577 -92.260 93.369 1.00 0.30 \ ATOM 100 N LEU H 36 12.745 -95.143 92.152 1.00 0.19 \ ATOM 101 CA LEU H 36 13.786 -95.887 91.448 1.00 0.19 \ ATOM 102 C LEU H 36 13.155 -96.805 90.407 1.00 0.19 \ ATOM 103 O LEU H 36 13.741 -97.813 90.012 1.00 0.19 \ ATOM 104 CB LEU H 36 14.644 -96.699 92.425 1.00 0.19 \ ATOM 105 CG LEU H 36 15.766 -95.967 93.168 1.00 0.19 \ ATOM 106 CD1 LEU H 36 16.413 -96.877 94.204 1.00 0.19 \ ATOM 107 CD2 LEU H 36 16.807 -95.441 92.190 1.00 0.19 \ ATOM 108 N ALA H 37 11.953 -96.443 89.970 1.00 0.59 \ ATOM 109 CA ALA H 37 11.219 -97.215 88.972 1.00 0.59 \ ATOM 110 C ALA H 37 10.654 -96.312 87.871 1.00 0.59 \ ATOM 111 O ALA H 37 10.389 -96.772 86.759 1.00 0.59 \ ATOM 112 CB ALA H 37 10.109 -98.018 89.635 1.00 0.59 \ ATOM 113 N PHE H 38 10.449 -95.036 88.196 1.00 1.41 \ ATOM 114 CA PHE H 38 10.160 -94.022 87.186 1.00 1.41 \ ATOM 115 C PHE H 38 11.482 -93.688 86.517 1.00 1.41 \ ATOM 116 O PHE H 38 11.518 -93.166 85.402 1.00 1.41 \ ATOM 117 CB PHE H 38 9.580 -92.744 87.810 1.00 1.41 \ ATOM 118 CG PHE H 38 8.088 -92.790 88.063 1.00 1.41 \ ATOM 119 CD1 PHE H 38 7.191 -92.900 87.012 1.00 1.41 \ ATOM 120 CD2 PHE H 38 7.585 -92.681 89.354 1.00 1.41 \ ATOM 121 CE1 PHE H 38 5.819 -92.930 87.250 1.00 1.41 \ ATOM 122 CE2 PHE H 38 6.215 -92.708 89.596 1.00 1.41 \ ATOM 123 CZ PHE H 38 5.333 -92.832 88.544 1.00 1.41 \ ATOM 124 N ILE H 39 12.572 -93.994 87.220 1.00 0.07 \ ATOM 125 CA ILE H 39 13.922 -93.707 86.730 1.00 0.07 \ ATOM 126 C ILE H 39 14.516 -94.863 85.895 1.00 0.07 \ ATOM 127 O ILE H 39 15.023 -94.640 84.796 1.00 0.07 \ ATOM 128 CB ILE H 39 14.877 -93.263 87.885 1.00 0.07 \ ATOM 129 CG1 ILE H 39 14.399 -91.942 88.493 1.00 0.07 \ ATOM 130 CG2 ILE H 39 16.305 -93.108 87.390 1.00 0.07 \ ATOM 131 CD1 ILE H 39 15.481 -91.166 89.203 1.00 0.07 \ ATOM 132 N VAL H 40 14.443 -96.089 86.411 1.00 -1.05 \ ATOM 133 CA VAL H 40 14.905 -97.256 85.657 1.00 -1.05 \ ATOM 134 C VAL H 40 14.060 -97.430 84.405 1.00 -1.05 \ ATOM 135 O VAL H 40 14.497 -98.028 83.429 1.00 -1.05 \ ATOM 136 CB VAL H 40 14.842 -98.558 86.485 1.00 -1.05 \ ATOM 137 CG1 VAL H 40 15.196 -99.763 85.616 1.00 -1.05 \ ATOM 138 CG2 VAL H 40 15.767 -98.472 87.690 1.00 -1.05 \ ATOM 139 N GLY H 41 12.844 -96.901 84.445 1.00 0.07 \ ATOM 140 CA GLY H 41 11.963 -96.926 83.294 1.00 0.07 \ ATOM 141 C GLY H 41 12.402 -95.929 82.235 1.00 0.07 \ ATOM 142 O GLY H 41 12.294 -96.196 81.035 1.00 0.07 \ ATOM 143 N LEU H 42 12.895 -94.774 82.680 1.00 0.14 \ ATOM 144 CA LEU H 42 13.445 -93.775 81.765 1.00 0.14 \ ATOM 145 C LEU H 42 14.735 -94.275 81.115 1.00 0.14 \ ATOM 146 O LEU H 42 15.067 -93.887 79.997 1.00 0.14 \ ATOM 147 CB LEU H 42 13.704 -92.446 82.484 1.00 0.14 \ ATOM 148 CG LEU H 42 12.506 -91.543 82.765 1.00 0.14 \ ATOM 149 CD1 LEU H 42 12.980 -90.108 82.885 1.00 0.14 \ ATOM 150 CD2 LEU H 42 11.473 -91.666 81.662 1.00 0.14 \ ATOM 151 N ILE H 43 15.458 -95.135 81.827 1.00 0.71 \ ATOM 152 CA ILE H 43 16.718 -95.682 81.331 1.00 0.71 \ ATOM 153 C ILE H 43 16.476 -96.888 80.411 1.00 0.71 \ ATOM 154 O ILE H 43 17.330 -97.232 79.589 1.00 0.71 \ ATOM 155 CB ILE H 43 17.681 -96.063 82.495 1.00 0.71 \ ATOM 156 CG1 ILE H 43 17.741 -94.956 83.555 1.00 0.71 \ ATOM 157 CG2 ILE H 43 19.074 -96.358 81.963 1.00 0.71 \ ATOM 158 CD1 ILE H 43 18.478 -93.712 83.119 1.00 0.71 \ ATOM 159 N ILE H 44 15.314 -97.527 80.551 1.00 0.68 \ ATOM 160 CA ILE H 44 14.916 -98.598 79.637 1.00 0.68 \ ATOM 161 C ILE H 44 14.208 -97.974 78.440 1.00 0.68 \ ATOM 162 O ILE H 44 14.164 -98.556 77.356 1.00 0.68 \ ATOM 163 CB ILE H 44 13.993 -99.649 80.308 1.00 0.68 \ ATOM 164 CG1 ILE H 44 14.639-100.202 81.580 1.00 0.68 \ ATOM 165 CG2 ILE H 44 13.702-100.802 79.359 1.00 0.68 \ ATOM 166 CD1 ILE H 44 13.771-101.194 82.351 1.00 0.68 \ ATOM 167 N LEU H 45 13.667 -96.773 78.643 1.00 1.40 \ ATOM 168 CA LEU H 45 12.971 -96.030 77.591 1.00 1.40 \ ATOM 169 C LEU H 45 13.964 -95.357 76.647 1.00 1.40 \ ATOM 170 O LEU H 45 13.915 -95.545 75.429 1.00 1.40 \ ATOM 171 CB LEU H 45 12.052 -94.973 78.213 1.00 1.40 \ ATOM 172 CG LEU H 45 11.169 -94.137 77.284 1.00 1.40 \ ATOM 173 CD1 LEU H 45 10.136 -95.015 76.597 1.00 1.40 \ ATOM 174 CD2 LEU H 45 10.492 -93.014 78.058 1.00 1.40 \ ATOM 175 N LEU H 46 14.864 -94.567 77.225 1.00 0.12 \ ATOM 176 CA LEU H 46 15.886 -93.869 76.459 1.00 0.12 \ ATOM 177 C LEU H 46 16.934 -94.854 75.951 1.00 0.12 \ ATOM 178 O LEU H 46 17.990 -94.456 75.464 1.00 0.12 \ ATOM 179 CB LEU H 46 16.536 -92.776 77.310 1.00 0.12 \ ATOM 180 CG LEU H 46 15.583 -91.758 77.945 1.00 0.12 \ ATOM 181 CD1 LEU H 46 16.338 -90.813 78.863 1.00 0.12 \ ATOM 182 CD2 LEU H 46 14.823 -90.979 76.886 1.00 0.12 \ ATOM 183 N SER H 47 16.633 -96.143 76.080 1.00 -0.71 \ ATOM 184 CA SER H 47 17.461 -97.192 75.501 1.00 -0.71 \ ATOM 185 C SER H 47 17.121 -97.337 74.021 1.00 -0.71 \ ATOM 186 O SER H 47 16.488 -98.313 73.613 1.00 -0.71 \ ATOM 187 CB SER H 47 17.242 -98.519 76.232 1.00 -0.71 \ ATOM 188 OG SER H 47 17.974 -99.569 75.622 1.00 -0.71 \ ATOM 189 N LYS H 48 17.544 -96.346 73.238 1.00 -0.63 \ ATOM 190 CA LYS H 48 17.277 -96.259 71.798 1.00 -0.63 \ ATOM 191 C LYS H 48 15.999 -95.479 71.465 1.00 -0.63 \ ATOM 192 O LYS H 48 15.721 -95.222 70.291 1.00 -0.63 \ ATOM 193 CB LYS H 48 17.258 -97.643 71.131 1.00 -0.63 \ ATOM 194 CG LYS H 48 18.631 -98.198 70.772 1.00 -0.63 \ ATOM 195 CD LYS H 48 18.505 -99.516 70.016 1.00 -0.63 \ ATOM 196 CE LYS H 48 19.858-100.042 69.569 1.00 -0.63 \ ATOM 197 NZ LYS H 48 19.737-101.347 68.864 1.00 -0.63 \ ATOM 198 N ARG H 49 15.241 -95.099 72.495 1.00 0.84 \ ATOM 199 CA ARG H 49 13.970 -94.380 72.331 1.00 0.84 \ ATOM 200 C ARG H 49 12.821 -95.326 71.967 1.00 0.84 \ ATOM 201 O ARG H 49 11.750 -94.894 71.533 1.00 0.84 \ ATOM 202 CB ARG H 49 14.089 -93.256 71.289 1.00 0.84 \ ATOM 203 CG ARG H 49 15.021 -92.115 71.682 1.00 0.84 \ ATOM 204 CD ARG H 49 15.181 -91.099 70.554 1.00 0.84 \ ATOM 205 NE ARG H 49 15.937 -89.928 70.989 1.00 0.84 \ ATOM 206 CZ ARG H 49 16.277 -88.918 70.196 1.00 0.84 \ ATOM 207 NH1 ARG H 49 15.933 -88.935 68.917 1.00 0.84 \ ATOM 208 NH2 ARG H 49 16.964 -87.894 70.682 1.00 0.84 \ """, "e3kdpH1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3kdpH1_csv", state=0, origin=1) cmd.zoom("e3kdpH1_csv", animate=-1)