cmd.read_pdbstr("""\ ATOM 1 N LYS A 6 4.060 12.841 68.997 1.00 -0.70 \ ATOM 2 CA LYS A 6 4.462 13.430 70.273 1.00 -0.70 \ ATOM 3 C LYS A 6 4.591 14.951 70.194 1.00 -0.70 \ ATOM 4 O LYS A 6 4.147 15.572 69.227 1.00 -0.70 \ ATOM 5 CB LYS A 6 5.769 12.803 70.771 1.00 -0.70 \ ATOM 6 CG LYS A 6 5.568 11.552 71.619 1.00 -0.70 \ ATOM 7 CD LYS A 6 6.863 10.770 71.755 1.00 -0.70 \ ATOM 8 CE LYS A 6 7.306 10.217 70.408 1.00 -0.70 \ ATOM 9 NZ LYS A 6 8.709 9.718 70.437 1.00 -0.70 \ ATOM 10 N LEU A 7 5.209 15.537 71.215 1.00 0.58 \ ATOM 11 CA LEU A 7 5.269 16.989 71.367 1.00 0.58 \ ATOM 12 C LEU A 7 3.911 17.546 71.776 1.00 0.58 \ ATOM 13 O LEU A 7 2.927 17.410 71.050 1.00 0.58 \ ATOM 14 CB LEU A 7 5.766 17.683 70.094 1.00 0.58 \ ATOM 15 CG LEU A 7 7.247 17.544 69.736 1.00 0.58 \ ATOM 16 CD1 LEU A 7 7.639 18.585 68.702 1.00 0.58 \ ATOM 17 CD2 LEU A 7 8.114 17.669 70.979 1.00 0.58 \ ATOM 18 N PRO A 8 3.861 18.176 72.953 1.00 0.41 \ ATOM 19 CA PRO A 8 2.655 18.773 73.535 1.00 0.41 \ ATOM 20 C PRO A 8 2.055 19.844 72.632 1.00 0.41 \ ATOM 21 O PRO A 8 2.727 20.318 71.712 1.00 0.41 \ ATOM 22 CB PRO A 8 3.173 19.403 74.832 1.00 0.41 \ ATOM 23 CG PRO A 8 4.405 18.633 75.158 1.00 0.41 \ ATOM 24 CD PRO A 8 5.028 18.318 73.837 1.00 0.41 \ ATOM 25 N PRO A 9 0.795 20.226 72.895 1.00 -0.79 \ ATOM 26 CA PRO A 9 0.055 21.205 72.091 1.00 -0.79 \ ATOM 27 C PRO A 9 0.846 22.475 71.781 1.00 -0.79 \ ATOM 28 O PRO A 9 1.365 23.129 72.692 1.00 -0.79 \ ATOM 29 CB PRO A 9 -1.148 21.541 72.980 1.00 -0.79 \ ATOM 30 CG PRO A 9 -1.383 20.295 73.750 1.00 -0.79 \ ATOM 31 CD PRO A 9 -0.023 19.691 73.998 1.00 -0.79 \ ATOM 32 N GLY A 10 0.927 22.814 70.497 1.00 -0.48 \ ATOM 33 CA GLY A 10 1.576 24.036 70.057 1.00 -0.48 \ ATOM 34 C GLY A 10 3.046 23.875 69.719 1.00 -0.48 \ ATOM 35 O GLY A 10 3.606 24.682 68.985 1.00 -0.48 \ ATOM 36 N TRP A 11 3.672 22.830 70.247 1.00 2.12 \ ATOM 37 CA TRP A 11 5.113 22.658 70.090 1.00 2.12 \ ATOM 38 C TRP A 11 5.493 22.158 68.706 1.00 2.12 \ ATOM 39 O TRP A 11 4.801 21.326 68.115 1.00 2.12 \ ATOM 40 CB TRP A 11 5.678 21.739 71.174 1.00 2.12 \ ATOM 41 CG TRP A 11 5.787 22.408 72.512 1.00 2.12 \ ATOM 42 CD1 TRP A 11 4.943 22.265 73.568 1.00 2.12 \ ATOM 43 CD2 TRP A 11 6.796 23.339 72.924 1.00 2.12 \ ATOM 44 NE1 TRP A 11 5.363 23.045 74.621 1.00 2.12 \ ATOM 45 CE2 TRP A 11 6.500 23.713 74.253 1.00 2.12 \ ATOM 46 CE3 TRP A 11 7.920 23.893 72.304 1.00 2.12 \ ATOM 47 CZ2 TRP A 11 7.288 24.613 74.971 1.00 2.12 \ ATOM 48 CZ3 TRP A 11 8.704 24.788 73.019 1.00 2.12 \ ATOM 49 CH2 TRP A 11 8.383 25.136 74.341 1.00 2.12 \ ATOM 50 N GLU A 12 6.611 22.670 68.205 1.00 -0.42 \ ATOM 51 CA GLU A 12 7.052 22.422 66.842 1.00 -0.42 \ ATOM 52 C GLU A 12 8.574 22.348 66.808 1.00 -0.42 \ ATOM 53 O GLU A 12 9.253 23.034 67.572 1.00 -0.42 \ ATOM 54 CB GLU A 12 6.561 23.561 65.950 1.00 -0.42 \ ATOM 55 CG GLU A 12 7.083 23.565 64.539 1.00 -0.42 \ ATOM 56 CD GLU A 12 6.457 24.676 63.717 1.00 -0.42 \ ATOM 57 OE1 GLU A 12 6.654 25.863 64.067 1.00 -0.42 \ ATOM 58 OE2 GLU A 12 5.755 24.360 62.731 1.00 -0.42 \ ATOM 59 N LYS A 13 9.111 21.505 65.935 1.00 -0.52 \ ATOM 60 CA LYS A 13 10.557 21.382 65.813 1.00 -0.52 \ ATOM 61 C LYS A 13 11.084 22.378 64.788 1.00 -0.52 \ ATOM 62 O LYS A 13 10.469 22.597 63.743 1.00 -0.52 \ ATOM 63 CB LYS A 13 10.955 19.945 65.458 1.00 -0.52 \ ATOM 64 CG LYS A 13 12.456 19.700 65.470 1.00 -0.52 \ ATOM 65 CD LYS A 13 12.804 18.213 65.365 1.00 -0.52 \ ATOM 66 CE LYS A 13 12.836 17.542 66.737 1.00 -0.52 \ ATOM 67 NZ LYS A 13 13.635 16.275 66.726 1.00 -0.52 \ ATOM 68 N ALA A 14 12.216 23.000 65.097 1.00 -0.61 \ ATOM 69 CA ALA A 14 12.774 24.025 64.226 1.00 -0.61 \ ATOM 70 C ALA A 14 14.291 23.928 64.085 1.00 -0.61 \ ATOM 71 O ALA A 14 14.952 23.137 64.765 1.00 -0.61 \ ATOM 72 CB ALA A 14 12.376 25.408 64.714 1.00 -0.61 \ ATOM 73 N MET A 15 14.831 24.756 63.199 1.00 -0.78 \ ATOM 74 CA MET A 15 16.252 24.739 62.888 1.00 -0.78 \ ATOM 75 C MET A 15 16.918 26.060 63.264 1.00 -0.78 \ ATOM 76 O MET A 15 16.548 27.114 62.753 1.00 -0.78 \ ATOM 77 CB MET A 15 16.441 24.456 61.395 1.00 -0.78 \ ATOM 78 CG MET A 15 17.883 24.358 60.962 1.00 -0.78 \ ATOM 79 SD MET A 15 18.766 23.212 62.022 1.00 -0.78 \ ATOM 80 CE MET A 15 17.751 21.741 61.864 1.00 -0.78 \ ATOM 81 N SER A 16 17.900 26.006 64.159 1.00 -0.03 \ ATOM 82 CA SER A 16 18.616 27.216 64.553 1.00 -0.03 \ ATOM 83 C SER A 16 19.389 27.819 63.384 1.00 -0.03 \ ATOM 84 O SER A 16 20.097 27.115 62.668 1.00 -0.03 \ ATOM 85 CB SER A 16 19.581 26.942 65.698 1.00 -0.03 \ ATOM 86 OG SER A 16 20.423 28.069 65.889 1.00 -0.03 \ ATOM 87 N ARG A 17 19.265 29.129 63.214 1.00 -0.74 \ ATOM 88 CA ARG A 17 19.875 29.816 62.083 1.00 -0.74 \ ATOM 89 C ARG A 17 21.342 30.133 62.346 1.00 -0.74 \ ATOM 90 O ARG A 17 22.111 30.387 61.420 1.00 -0.74 \ ATOM 91 CB ARG A 17 19.098 31.094 61.766 1.00 -0.74 \ ATOM 92 CG ARG A 17 19.409 31.690 60.411 1.00 -0.74 \ ATOM 93 CD ARG A 17 18.187 32.391 59.851 1.00 -0.74 \ ATOM 94 NE ARG A 17 17.058 31.471 59.738 1.00 -0.74 \ ATOM 95 CZ ARG A 17 15.867 31.805 59.252 1.00 -0.74 \ ATOM 96 NH1 ARG A 17 15.643 33.044 58.828 1.00 -0.74 \ ATOM 97 NH2 ARG A 17 14.899 30.900 59.192 1.00 -0.74 \ ATOM 98 N SER A 18 21.722 30.123 63.617 1.00 -0.74 \ ATOM 99 CA SER A 18 23.103 30.375 64.003 1.00 -0.74 \ ATOM 100 C SER A 18 23.885 29.071 64.121 1.00 -0.74 \ ATOM 101 O SER A 18 24.991 28.951 63.590 1.00 -0.74 \ ATOM 102 CB SER A 18 23.158 31.126 65.341 1.00 -0.74 \ ATOM 103 OG SER A 18 22.741 32.477 65.208 1.00 -0.74 \ ATOM 104 N SER A 19 23.293 28.091 64.801 1.00 -1.00 \ ATOM 105 CA SER A 19 23.998 26.871 65.191 1.00 -1.00 \ ATOM 106 C SER A 19 23.804 25.721 64.220 1.00 -1.00 \ ATOM 107 O SER A 19 24.684 24.876 64.064 1.00 -1.00 \ ATOM 108 CB SER A 19 23.505 26.403 66.562 1.00 -1.00 \ ATOM 109 OG SER A 19 22.804 27.440 67.226 1.00 -1.00 \ ATOM 110 N GLY A 20 22.635 25.674 63.589 1.00 -0.06 \ ATOM 111 CA GLY A 20 22.240 24.515 62.811 1.00 -0.06 \ ATOM 112 C GLY A 20 21.616 23.457 63.708 1.00 -0.06 \ ATOM 113 O GLY A 20 21.122 22.433 63.238 1.00 -0.06 \ ATOM 114 N ARG A 21 21.647 23.697 65.014 1.00 -0.71 \ ATOM 115 CA ARG A 21 21.046 22.765 65.959 1.00 -0.71 \ ATOM 116 C ARG A 21 19.526 22.864 65.993 1.00 -0.71 \ ATOM 117 O ARG A 21 18.947 23.938 65.854 1.00 -0.71 \ ATOM 118 CB ARG A 21 21.601 22.972 67.368 1.00 -0.71 \ ATOM 119 CG ARG A 21 22.492 21.846 67.864 1.00 -0.71 \ ATOM 120 CD ARG A 21 22.738 22.018 69.355 1.00 -0.71 \ ATOM 121 NE ARG A 21 23.253 23.356 69.616 1.00 -0.71 \ ATOM 122 CZ ARG A 21 22.903 24.116 70.645 1.00 -0.71 \ ATOM 123 NH1 ARG A 21 22.021 23.686 71.541 1.00 -0.71 \ ATOM 124 NH2 ARG A 21 23.440 25.319 70.771 1.00 -0.71 \ ATOM 125 N VAL A 22 18.889 21.721 66.184 1.00 -0.70 \ ATOM 126 CA VAL A 22 17.444 21.665 66.311 1.00 -0.70 \ ATOM 127 C VAL A 22 17.021 22.366 67.601 1.00 -0.70 \ ATOM 128 O VAL A 22 17.734 22.330 68.598 1.00 -0.70 \ ATOM 129 CB VAL A 22 16.971 20.201 66.336 1.00 -0.70 \ ATOM 130 CG1 VAL A 22 15.566 20.089 66.902 1.00 -0.70 \ ATOM 131 CG2 VAL A 22 17.055 19.598 64.936 1.00 -0.70 \ ATOM 132 N TYR A 23 15.877 23.035 67.568 1.00 1.43 \ ATOM 133 CA TYR A 23 15.274 23.539 68.795 1.00 1.43 \ ATOM 134 C TYR A 23 13.766 23.405 68.695 1.00 1.43 \ ATOM 135 O TYR A 23 13.246 22.916 67.695 1.00 1.43 \ ATOM 136 CB TYR A 23 15.682 24.983 69.081 1.00 1.43 \ ATOM 137 CG TYR A 23 15.089 26.011 68.148 1.00 1.43 \ ATOM 138 CD1 TYR A 23 15.597 26.186 66.866 1.00 1.43 \ ATOM 139 CD2 TYR A 23 14.035 26.826 68.553 1.00 1.43 \ ATOM 140 CE1 TYR A 23 15.068 27.129 66.011 1.00 1.43 \ ATOM 141 CE2 TYR A 23 13.500 27.781 67.697 1.00 1.43 \ ATOM 142 CZ TYR A 23 14.023 27.925 66.427 1.00 1.43 \ ATOM 143 OH TYR A 23 13.502 28.862 65.562 1.00 1.43 \ ATOM 144 N TYR A 24 13.069 23.825 69.743 1.00 1.92 \ ATOM 145 CA TYR A 24 11.626 23.659 69.805 1.00 1.92 \ ATOM 146 C TYR A 24 10.952 25.002 70.050 1.00 1.92 \ ATOM 147 O TYR A 24 11.430 25.822 70.835 1.00 1.92 \ ATOM 148 CB TYR A 24 11.259 22.649 70.892 1.00 1.92 \ ATOM 149 CG TYR A 24 11.865 21.288 70.641 1.00 1.92 \ ATOM 150 CD1 TYR A 24 13.140 20.976 71.102 1.00 1.92 \ ATOM 151 CD2 TYR A 24 11.173 20.324 69.918 1.00 1.92 \ ATOM 152 CE1 TYR A 24 13.703 19.733 70.861 1.00 1.92 \ ATOM 153 CE2 TYR A 24 11.721 19.081 69.674 1.00 1.92 \ ATOM 154 CZ TYR A 24 12.984 18.789 70.144 1.00 1.92 \ ATOM 155 OH TYR A 24 13.526 17.551 69.897 1.00 1.92 \ ATOM 156 N PHE A 25 9.844 25.216 69.357 1.00 -0.07 \ ATOM 157 CA PHE A 25 9.129 26.480 69.377 1.00 -0.07 \ ATOM 158 C PHE A 25 7.649 26.161 69.531 1.00 -0.07 \ ATOM 159 O PHE A 25 7.161 25.171 68.992 1.00 -0.07 \ ATOM 160 CB PHE A 25 9.386 27.235 68.065 1.00 -0.07 \ ATOM 161 CG PHE A 25 8.498 28.433 67.859 1.00 -0.07 \ ATOM 162 CD1 PHE A 25 8.664 29.580 68.628 1.00 -0.07 \ ATOM 163 CD2 PHE A 25 7.506 28.418 66.890 1.00 -0.07 \ ATOM 164 CE1 PHE A 25 7.849 30.690 68.439 1.00 -0.07 \ ATOM 165 CE2 PHE A 25 6.690 29.524 66.696 1.00 -0.07 \ ATOM 166 CZ PHE A 25 6.860 30.659 67.479 1.00 -0.07 \ ATOM 167 N ASN A 26 6.941 26.990 70.284 1.00 1.17 \ ATOM 168 CA ASN A 26 5.514 26.795 70.501 1.00 1.17 \ ATOM 169 C ASN A 26 4.746 27.957 69.887 1.00 1.17 \ ATOM 170 O ASN A 26 4.958 29.112 70.254 1.00 1.17 \ ATOM 171 CB ASN A 26 5.219 26.662 72.000 1.00 1.17 \ ATOM 172 CG ASN A 26 3.799 26.207 72.272 1.00 1.17 \ ATOM 173 OD1 ASN A 26 2.840 26.879 71.897 1.00 1.17 \ ATOM 174 ND2 ASN A 26 3.658 25.058 72.917 1.00 1.17 \ ATOM 175 N HIS A 27 3.872 27.667 68.926 1.00 -0.56 \ ATOM 176 CA HIS A 27 3.245 28.750 68.174 1.00 -0.56 \ ATOM 177 C HIS A 27 2.027 29.341 68.882 1.00 -0.56 \ ATOM 178 O HIS A 27 1.419 30.290 68.380 1.00 -0.56 \ ATOM 179 CB HIS A 27 2.880 28.310 66.748 1.00 -0.56 \ ATOM 180 CG HIS A 27 1.831 27.246 66.698 1.00 -0.56 \ ATOM 181 ND1 HIS A 27 2.122 25.933 66.387 1.00 -0.56 \ ATOM 182 CD2 HIS A 27 0.496 27.294 66.920 1.00 -0.56 \ ATOM 183 CE1 HIS A 27 1.004 25.219 66.421 1.00 -0.56 \ ATOM 184 NE2 HIS A 27 0.009 26.024 66.743 1.00 -0.56 \ ATOM 185 N ILE A 28 1.676 28.773 70.034 1.00 -0.85 \ ATOM 186 CA ILE A 28 0.601 29.307 70.869 1.00 -0.85 \ ATOM 187 C ILE A 28 1.179 30.242 71.935 1.00 -0.85 \ ATOM 188 O ILE A 28 0.632 31.307 72.196 1.00 -0.85 \ ATOM 189 CB ILE A 28 -0.193 28.192 71.592 1.00 -0.85 \ ATOM 190 CG1 ILE A 28 -0.644 27.101 70.620 1.00 -0.85 \ ATOM 191 CG2 ILE A 28 -1.402 28.785 72.321 1.00 -0.85 \ ATOM 192 CD1 ILE A 28 -1.602 27.594 69.569 1.00 -0.85 \ """, "e3ntpA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3ntpA2_csv", state=0, origin=1) cmd.zoom("e3ntpA2_csv", animate=-1)