cmd.read_pdbstr("""\ ATOM 1 N LEU A 7 29.938 -43.635 23.258 1.00 0.58 \ ATOM 2 CA LEU A 7 29.569 -42.536 22.323 1.00 0.58 \ ATOM 3 C LEU A 7 30.790 -41.780 21.821 1.00 0.58 \ ATOM 4 O LEU A 7 31.731 -41.515 22.599 1.00 0.58 \ ATOM 5 CB LEU A 7 28.548 -41.610 22.968 1.00 0.58 \ ATOM 6 CG LEU A 7 27.154 -42.197 22.755 1.00 0.58 \ ATOM 7 CD1 LEU A 7 26.091 -41.625 23.692 1.00 0.58 \ ATOM 8 CD2 LEU A 7 26.762 -42.019 21.293 1.00 0.58 \ ATOM 9 N PRO A 8 30.791 -41.427 20.514 1.00 0.41 \ ATOM 10 CA PRO A 8 31.941 -40.794 19.817 1.00 0.41 \ ATOM 11 C PRO A 8 32.569 -39.635 20.611 1.00 0.41 \ ATOM 12 O PRO A 8 32.018 -39.257 21.649 1.00 0.41 \ ATOM 13 CB PRO A 8 31.319 -40.264 18.527 1.00 0.41 \ ATOM 14 CG PRO A 8 30.098 -41.079 18.310 1.00 0.41 \ ATOM 15 CD PRO A 8 29.605 -41.538 19.643 1.00 0.41 \ ATOM 16 N PRO A 9 33.711 -39.063 20.133 1.00 -0.79 \ ATOM 17 CA PRO A 9 34.331 -37.925 20.849 1.00 -0.79 \ ATOM 18 C PRO A 9 33.317 -36.913 21.433 1.00 -0.79 \ ATOM 19 O PRO A 9 32.598 -36.244 20.667 1.00 -0.79 \ ATOM 20 CB PRO A 9 35.197 -37.247 19.774 1.00 -0.79 \ ATOM 21 CG PRO A 9 35.248 -38.204 18.602 1.00 -0.79 \ ATOM 22 CD PRO A 9 34.515 -39.462 18.959 1.00 -0.79 \ ATOM 23 N GLY A 10 33.243 -36.845 22.772 1.00 -0.48 \ ATOM 24 CA GLY A 10 32.542 -35.765 23.494 1.00 -0.48 \ ATOM 25 C GLY A 10 31.031 -35.755 23.385 1.00 -0.48 \ ATOM 26 O GLY A 10 30.356 -34.849 23.881 1.00 -0.48 \ ATOM 27 N TRP A 11 30.495 -36.761 22.712 1.00 2.12 \ ATOM 28 CA TRP A 11 29.056 -36.955 22.678 1.00 2.12 \ ATOM 29 C TRP A 11 28.652 -37.538 24.014 1.00 2.12 \ ATOM 30 O TRP A 11 29.036 -38.668 24.357 1.00 2.12 \ ATOM 31 CB TRP A 11 28.661 -37.865 21.518 1.00 2.12 \ ATOM 32 CG TRP A 11 28.467 -37.102 20.255 1.00 2.12 \ ATOM 33 CD1 TRP A 11 29.268 -37.116 19.146 1.00 2.12 \ ATOM 34 CD2 TRP A 11 27.405 -36.178 19.972 1.00 2.12 \ ATOM 35 NE1 TRP A 11 28.764 -36.261 18.193 1.00 2.12 \ ATOM 36 CE2 TRP A 11 27.617 -35.680 18.680 1.00 2.12 \ ATOM 37 CE3 TRP A 11 26.292 -35.723 20.690 1.00 2.12 \ ATOM 38 CZ2 TRP A 11 26.753 -34.752 18.097 1.00 2.12 \ ATOM 39 CZ3 TRP A 11 25.444 -34.816 20.101 1.00 2.12 \ ATOM 40 CH2 TRP A 11 25.676 -34.345 18.826 1.00 2.12 \ ATOM 41 N GLU A 12 27.930 -36.747 24.795 1.00 -0.42 \ ATOM 42 CA GLU A 12 27.453 -37.222 26.077 1.00 -0.42 \ ATOM 43 C GLU A 12 25.954 -37.197 25.970 1.00 -0.42 \ ATOM 44 O GLU A 12 25.415 -36.394 25.205 1.00 -0.42 \ ATOM 45 CB GLU A 12 27.941 -36.325 27.219 1.00 -0.42 \ ATOM 46 CG GLU A 12 29.483 -36.092 27.255 1.00 -0.42 \ ATOM 47 CD GLU A 12 30.326 -37.309 27.731 1.00 -0.42 \ ATOM 48 OE1 GLU A 12 31.578 -37.195 27.716 1.00 -0.42 \ ATOM 49 OE2 GLU A 12 29.760 -38.368 28.117 1.00 -0.42 \ ATOM 50 N LYS A 13 25.276 -38.088 26.685 1.00 -0.52 \ ATOM 51 CA LYS A 13 23.827 -38.010 26.778 1.00 -0.52 \ ATOM 52 C LYS A 13 23.424 -37.101 27.973 1.00 -0.52 \ ATOM 53 O LYS A 13 24.272 -36.786 28.830 1.00 -0.52 \ ATOM 54 CB LYS A 13 23.232 -39.416 26.868 1.00 -0.52 \ ATOM 55 CG LYS A 13 21.798 -39.520 26.336 1.00 -0.52 \ ATOM 56 CD LYS A 13 21.134 -40.886 26.619 1.00 -0.52 \ ATOM 57 CE LYS A 13 21.187 -41.810 25.410 1.00 -0.52 \ ATOM 58 NZ LYS A 13 20.089 -42.797 25.415 1.00 -0.52 \ ATOM 59 N ALA A 14 22.160 -36.659 28.009 1.00 -0.61 \ ATOM 60 CA ALA A 14 21.650 -35.763 29.062 1.00 -0.61 \ ATOM 61 C ALA A 14 20.115 -35.683 29.101 1.00 -0.61 \ ATOM 62 O ALA A 14 19.428 -36.428 28.399 1.00 -0.61 \ ATOM 63 CB ALA A 14 22.240 -34.372 28.910 1.00 -0.61 \ ATOM 64 N MET A 15 19.583 -34.761 29.910 1.00 -0.78 \ ATOM 65 CA MET A 15 18.127 -34.630 30.117 1.00 -0.78 \ ATOM 66 C MET A 15 17.539 -33.263 29.709 1.00 -0.78 \ ATOM 67 O MET A 15 17.929 -32.214 30.257 1.00 -0.78 \ ATOM 68 CB MET A 15 17.773 -34.918 31.583 1.00 -0.78 \ ATOM 69 CG MET A 15 16.394 -35.570 31.795 1.00 -0.78 \ ATOM 70 SD MET A 15 16.408 -37.344 31.430 1.00 -0.78 \ ATOM 71 CE MET A 15 17.790 -37.963 32.419 1.00 -0.78 \ ATOM 72 N SER A 16 16.590 -33.296 28.763 1.00 -0.03 \ ATOM 73 CA SER A 16 15.903 -32.088 28.305 1.00 -0.03 \ ATOM 74 C SER A 16 15.070 -31.474 29.420 1.00 -0.03 \ ATOM 75 O SER A 16 14.193 -32.138 29.974 1.00 -0.03 \ ATOM 76 CB SER A 16 15.004 -32.380 27.105 1.00 -0.03 \ ATOM 77 OG SER A 16 14.010 -31.367 26.966 1.00 -0.03 \ ATOM 78 N ARG A 17 15.330 -30.206 29.731 1.00 -0.74 \ ATOM 79 CA ARG A 17 14.645 -29.530 30.849 1.00 -0.74 \ ATOM 80 C ARG A 17 13.298 -28.906 30.479 1.00 -0.74 \ ATOM 81 O ARG A 17 12.760 -28.074 31.219 1.00 -0.74 \ ATOM 82 CB ARG A 17 15.566 -28.502 31.538 1.00 -0.74 \ ATOM 83 CG ARG A 17 16.054 -27.330 30.666 1.00 -0.74 \ ATOM 84 CD ARG A 17 16.932 -26.399 31.494 1.00 -0.74 \ ATOM 85 NE ARG A 17 17.717 -27.184 32.444 1.00 -0.74 \ ATOM 86 CZ ARG A 17 18.158 -26.744 33.618 1.00 -0.74 \ ATOM 87 NH1 ARG A 17 17.909 -25.501 34.019 1.00 -0.74 \ ATOM 88 NH2 ARG A 17 18.856 -27.558 34.396 1.00 -0.74 \ ATOM 89 N SER A 18 12.766 -29.309 29.331 1.00 -0.74 \ ATOM 90 CA SER A 18 11.436 -28.896 28.904 1.00 -0.74 \ ATOM 91 C SER A 18 10.503 -30.112 28.908 1.00 -0.74 \ ATOM 92 O SER A 18 9.381 -30.051 29.447 1.00 -0.74 \ ATOM 93 CB SER A 18 11.492 -28.235 27.520 1.00 -0.74 \ ATOM 94 OG SER A 18 12.050 -26.933 27.581 1.00 -0.74 \ ATOM 95 N SER A 19 11.001 -31.216 28.337 1.00 -1.00 \ ATOM 96 CA SER A 19 10.227 -32.455 28.157 1.00 -1.00 \ ATOM 97 C SER A 19 10.684 -33.644 29.026 1.00 -1.00 \ ATOM 98 O SER A 19 9.931 -34.622 29.178 1.00 -1.00 \ ATOM 99 CB SER A 19 10.187 -32.867 26.672 1.00 -1.00 \ ATOM 100 OG SER A 19 11.468 -33.210 26.171 1.00 -1.00 \ ATOM 101 N GLY A 20 11.896 -33.572 29.590 1.00 -0.06 \ ATOM 102 CA GLY A 20 12.457 -34.687 30.370 1.00 -0.06 \ ATOM 103 C GLY A 20 12.719 -35.905 29.490 1.00 -0.06 \ ATOM 104 O GLY A 20 12.885 -37.039 29.979 1.00 -0.06 \ ATOM 105 N ARG A 21 12.734 -35.663 28.179 1.00 -0.71 \ ATOM 106 CA ARG A 21 12.993 -36.697 27.180 1.00 -0.71 \ ATOM 107 C ARG A 21 14.446 -36.563 26.716 1.00 -0.71 \ ATOM 108 O ARG A 21 14.979 -35.450 26.641 1.00 -0.71 \ ATOM 109 CB ARG A 21 12.024 -36.556 25.999 1.00 -0.71 \ ATOM 110 CG ARG A 21 12.058 -37.691 24.997 1.00 -0.71 \ ATOM 111 CD ARG A 21 12.094 -37.142 23.592 1.00 -0.71 \ ATOM 112 NE ARG A 21 11.538 -35.788 23.522 1.00 -0.71 \ ATOM 113 CZ ARG A 21 11.670 -34.963 22.482 1.00 -0.71 \ ATOM 114 NH1 ARG A 21 12.347 -35.344 21.393 1.00 -0.71 \ ATOM 115 NH2 ARG A 21 11.120 -33.751 22.532 1.00 -0.71 \ ATOM 116 N VAL A 22 15.061 -37.706 26.405 1.00 -0.70 \ ATOM 117 CA VAL A 22 16.480 -37.809 26.030 1.00 -0.70 \ ATOM 118 C VAL A 22 16.967 -36.892 24.894 1.00 -0.70 \ ATOM 119 O VAL A 22 16.257 -36.656 23.904 1.00 -0.70 \ ATOM 120 CB VAL A 22 16.846 -39.270 25.668 1.00 -0.70 \ ATOM 121 CG1 VAL A 22 17.731 -39.907 26.769 1.00 -0.70 \ ATOM 122 CG2 VAL A 22 15.546 -40.104 25.341 1.00 -0.70 \ ATOM 123 N TYR A 23 18.181 -36.373 25.063 1.00 1.43 \ ATOM 124 CA TYR A 23 18.891 -35.682 23.992 1.00 1.43 \ ATOM 125 C TYR A 23 20.397 -35.734 24.254 1.00 1.43 \ ATOM 126 O TYR A 23 20.828 -36.086 25.352 1.00 1.43 \ ATOM 127 CB TYR A 23 18.414 -34.242 23.857 1.00 1.43 \ ATOM 128 CG TYR A 23 19.118 -33.310 24.785 1.00 1.43 \ ATOM 129 CD1 TYR A 23 20.241 -32.615 24.362 1.00 1.43 \ ATOM 130 CD2 TYR A 23 18.674 -33.119 26.083 1.00 1.43 \ ATOM 131 CE1 TYR A 23 20.909 -31.753 25.203 1.00 1.43 \ ATOM 132 CE2 TYR A 23 19.332 -32.259 26.934 1.00 1.43 \ ATOM 133 CZ TYR A 23 20.451 -31.566 26.490 1.00 1.43 \ ATOM 134 OH TYR A 23 21.135 -30.682 27.315 1.00 1.43 \ ATOM 135 N TYR A 24 21.182 -35.399 23.231 1.00 1.92 \ ATOM 136 CA TYR A 24 22.644 -35.435 23.287 1.00 1.92 \ ATOM 137 C TYR A 24 23.184 -34.033 22.953 1.00 1.92 \ ATOM 138 O TYR A 24 22.623 -33.304 22.108 1.00 1.92 \ ATOM 139 CB TYR A 24 23.173 -36.465 22.290 1.00 1.92 \ ATOM 140 CG TYR A 24 22.404 -37.769 22.275 1.00 1.92 \ ATOM 141 CD1 TYR A 24 21.048 -37.795 21.922 1.00 1.92 \ ATOM 142 CD2 TYR A 24 23.025 -38.980 22.608 1.00 1.92 \ ATOM 143 CE1 TYR A 24 20.318 -38.979 21.915 1.00 1.92 \ ATOM 144 CE2 TYR A 24 22.306 -40.190 22.588 1.00 1.92 \ ATOM 145 CZ TYR A 24 20.941 -40.171 22.238 1.00 1.92 \ ATOM 146 OH TYR A 24 20.192 -41.330 22.213 1.00 1.92 \ ATOM 147 N PHE A 25 24.240 -33.634 23.657 1.00 -0.07 \ ATOM 148 CA PHE A 25 24.941 -32.396 23.368 1.00 -0.07 \ ATOM 149 C PHE A 25 26.346 -32.831 23.186 1.00 -0.07 \ ATOM 150 O PHE A 25 26.768 -33.844 23.738 1.00 -0.07 \ ATOM 151 CB PHE A 25 24.847 -31.379 24.531 1.00 -0.07 \ ATOM 152 CG PHE A 25 25.446 -31.874 25.833 1.00 -0.07 \ ATOM 153 CD1 PHE A 25 26.595 -31.275 26.358 1.00 -0.07 \ ATOM 154 CD2 PHE A 25 24.860 -32.948 26.536 1.00 -0.07 \ ATOM 155 CE1 PHE A 25 27.161 -31.750 27.571 1.00 -0.07 \ ATOM 156 CE2 PHE A 25 25.412 -33.441 27.741 1.00 -0.07 \ ATOM 157 CZ PHE A 25 26.566 -32.844 28.263 1.00 -0.07 \ ATOM 158 N ASN A 26 27.094 -32.082 22.409 1.00 1.17 \ ATOM 159 CA ASN A 26 28.501 -32.368 22.327 1.00 1.17 \ ATOM 160 C ASN A 26 29.291 -31.231 22.987 1.00 1.17 \ ATOM 161 O ASN A 26 29.197 -30.077 22.576 1.00 1.17 \ ATOM 162 CB ASN A 26 28.884 -32.629 20.892 1.00 1.17 \ ATOM 163 CG ASN A 26 30.301 -33.039 20.761 1.00 1.17 \ ATOM 164 OD1 ASN A 26 31.206 -32.285 21.155 1.00 1.17 \ ATOM 165 ND2 ASN A 26 30.532 -34.244 20.219 1.00 1.17 \ ATOM 166 N HIS A 27 30.035 -31.540 24.047 1.00 -0.56 \ ATOM 167 CA HIS A 27 30.777 -30.508 24.765 1.00 -0.56 \ ATOM 168 C HIS A 27 32.030 -30.051 24.011 1.00 -0.56 \ ATOM 169 O HIS A 27 32.731 -29.148 24.472 1.00 -0.56 \ ATOM 170 CB HIS A 27 31.124 -30.974 26.180 1.00 -0.56 \ ATOM 171 CG HIS A 27 32.114 -32.108 26.228 1.00 -0.56 \ ATOM 172 ND1 HIS A 27 33.473 -31.928 26.032 1.00 -0.56 \ ATOM 173 CD2 HIS A 27 31.942 -33.433 26.467 1.00 -0.56 \ ATOM 174 CE1 HIS A 27 34.087 -33.097 26.117 1.00 -0.56 \ ATOM 175 NE2 HIS A 27 33.180 -34.027 26.379 1.00 -0.56 \ ATOM 176 N ILE A 28 32.324 -30.658 22.864 1.00 -0.85 \ ATOM 177 CA ILE A 28 33.455 -30.192 22.046 1.00 -0.85 \ ATOM 178 C ILE A 28 33.016 -29.303 20.872 1.00 -0.85 \ ATOM 179 O ILE A 28 33.827 -28.510 20.362 1.00 -0.85 \ ATOM 180 CB ILE A 28 34.317 -31.357 21.477 1.00 -0.85 \ ATOM 181 CG1 ILE A 28 34.962 -32.195 22.598 1.00 -0.85 \ ATOM 182 CG2 ILE A 28 35.418 -30.832 20.566 1.00 -0.85 \ ATOM 183 CD1 ILE A 28 36.034 -33.231 22.083 1.00 -0.85 \ """, "e3odkA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3odkA2_csv", state=0, origin=1) cmd.zoom("e3odkA2_csv", animate=-1)