cmd.read_pdbstr("""\ ATOM 1 N PHE D 1 18.012 -20.167 27.461 1.00 -1.00 \ ATOM 2 CA PHE D 1 17.485 -21.226 26.552 1.00 -1.00 \ ATOM 3 C PHE D 1 16.886 -20.610 25.287 1.00 -1.00 \ ATOM 4 O PHE D 1 15.793 -20.046 25.327 1.00 -1.00 \ ATOM 5 CB PHE D 1 16.409 -22.052 27.268 1.00 -1.00 \ ATOM 6 CG PHE D 1 16.908 -22.785 28.481 1.00 -1.00 \ ATOM 7 CD1 PHE D 1 17.484 -22.095 29.544 1.00 -1.00 \ ATOM 8 CD2 PHE D 1 16.794 -24.168 28.565 1.00 -1.00 \ ATOM 9 CE1 PHE D 1 17.939 -22.771 30.672 1.00 -1.00 \ ATOM 10 CE2 PHE D 1 17.246 -24.855 29.688 1.00 -1.00 \ ATOM 11 CZ PHE D 1 17.820 -24.154 30.744 1.00 -1.00 \ ATOM 12 N VAL D 2 17.597 -20.712 24.166 1.00 -1.00 \ ATOM 13 CA VAL D 2 17.091 -20.158 22.912 1.00 -1.00 \ ATOM 14 C VAL D 2 15.823 -20.917 22.547 1.00 -1.00 \ ATOM 15 O VAL D 2 14.993 -20.431 21.782 1.00 -1.00 \ ATOM 16 CB VAL D 2 18.111 -20.294 21.758 1.00 -1.00 \ ATOM 17 CG1 VAL D 2 17.641 -19.493 20.553 1.00 -1.00 \ ATOM 18 CG2 VAL D 2 19.472 -19.808 22.206 1.00 -1.00 \ ATOM 19 N ASN D 3 15.685 -22.121 23.095 1.00 -0.47 \ ATOM 20 CA ASN D 3 14.494 -22.928 22.858 1.00 -0.47 \ ATOM 21 C ASN D 3 13.322 -22.075 23.329 1.00 -0.47 \ ATOM 22 O ASN D 3 12.332 -21.901 22.609 1.00 -0.47 \ ATOM 23 CB ASN D 3 14.548 -24.221 23.680 1.00 -0.47 \ ATOM 24 CG ASN D 3 13.243 -25.013 23.626 1.00 -0.47 \ ATOM 25 OD1 ASN D 3 13.053 -25.959 24.394 1.00 -0.47 \ ATOM 26 ND2 ASN D 3 12.343 -24.634 22.716 1.00 -0.47 \ ATOM 27 N GLN D 4 13.461 -21.540 24.543 1.00 0.24 \ ATOM 28 CA GLN D 4 12.437 -20.698 25.134 1.00 0.24 \ ATOM 29 C GLN D 4 12.562 -19.265 24.630 1.00 0.24 \ ATOM 30 O GLN D 4 11.636 -18.476 24.776 1.00 0.24 \ ATOM 31 CB GLN D 4 12.519 -20.739 26.668 1.00 0.24 \ ATOM 32 CG GLN D 4 13.766 -20.124 27.273 1.00 0.24 \ ATOM 33 CD GLN D 4 13.760 -20.176 28.791 1.00 0.24 \ ATOM 34 OE1 GLN D 4 13.664 -21.251 29.386 1.00 0.24 \ ATOM 35 NE2 GLN D 4 13.860 -19.012 29.425 1.00 0.24 \ ATOM 36 N HIS D 5 13.709 -18.930 24.043 1.00 -0.03 \ ATOM 37 CA HIS D 5 13.909 -17.589 23.495 1.00 -0.03 \ ATOM 38 C HIS D 5 13.181 -17.525 22.148 1.00 -0.03 \ ATOM 39 O HIS D 5 12.391 -16.616 21.883 1.00 -0.03 \ ATOM 40 CB HIS D 5 15.397 -17.295 23.286 1.00 -0.03 \ ATOM 41 CG HIS D 5 15.678 -15.872 22.914 1.00 -0.03 \ ATOM 42 ND1 HIS D 5 15.370 -14.812 23.742 1.00 -0.03 \ ATOM 43 CD2 HIS D 5 16.213 -15.330 21.794 1.00 -0.03 \ ATOM 44 CE1 HIS D 5 15.701 -13.680 23.149 1.00 -0.03 \ ATOM 45 NE2 HIS D 5 16.215 -13.965 21.965 1.00 -0.03 \ ATOM 46 N LEU D 6 13.458 -18.507 21.301 1.00 1.17 \ ATOM 47 CA LEU D 6 12.822 -18.592 19.997 1.00 1.17 \ ATOM 48 C LEU D 6 11.312 -18.726 20.189 1.00 1.17 \ ATOM 49 O LEU D 6 10.540 -18.020 19.552 1.00 1.17 \ ATOM 50 CB LEU D 6 13.381 -19.796 19.228 1.00 1.17 \ ATOM 51 CG LEU D 6 14.378 -19.518 18.096 1.00 1.17 \ ATOM 52 CD1 LEU D 6 15.317 -18.377 18.458 1.00 1.17 \ ATOM 53 CD2 LEU D 6 15.152 -20.792 17.789 1.00 1.17 \ ATOM 54 N CYS D 7 10.904 -19.626 21.078 1.00 1.73 \ ATOM 55 CA CYS D 7 9.489 -19.851 21.367 1.00 1.73 \ ATOM 56 C CYS D 7 8.858 -18.591 21.953 1.00 1.73 \ ATOM 57 O CYS D 7 7.663 -18.346 21.784 1.00 1.73 \ ATOM 58 CB CYS D 7 9.336 -21.005 22.365 1.00 1.73 \ ATOM 59 SG CYS D 7 7.639 -21.319 22.955 1.00 1.73 \ ATOM 60 N GLY D 8 9.666 -17.796 22.651 1.00 0.73 \ ATOM 61 CA GLY D 8 9.161 -16.571 23.248 1.00 0.73 \ ATOM 62 C GLY D 8 8.755 -15.579 22.183 1.00 0.73 \ ATOM 63 O GLY D 8 7.733 -14.900 22.301 1.00 0.73 \ ATOM 64 N SER D 9 9.577 -15.498 21.141 1.00 -0.47 \ ATOM 65 CA SER D 9 9.326 -14.612 20.015 1.00 -0.47 \ ATOM 66 C SER D 9 7.958 -14.934 19.438 1.00 -0.47 \ ATOM 67 O SER D 9 7.186 -14.037 19.101 1.00 -0.47 \ ATOM 68 CB SER D 9 10.387 -14.813 18.937 1.00 -0.47 \ ATOM 69 OG SER D 9 10.145 -13.945 17.855 1.00 -0.47 \ ATOM 70 N HIS D 10 7.659 -16.223 19.316 1.00 -0.22 \ ATOM 71 CA HIS D 10 6.362 -16.615 18.787 1.00 -0.22 \ ATOM 72 C HIS D 10 5.193 -16.405 19.729 1.00 -0.22 \ ATOM 73 O HIS D 10 4.061 -16.176 19.291 1.00 -0.22 \ ATOM 74 CB HIS D 10 6.424 -18.068 18.325 1.00 -0.22 \ ATOM 75 CG HIS D 10 7.246 -18.243 17.095 1.00 -0.22 \ ATOM 76 ND1 HIS D 10 6.930 -17.618 15.908 1.00 -0.22 \ ATOM 77 CD2 HIS D 10 8.413 -18.893 16.884 1.00 -0.22 \ ATOM 78 CE1 HIS D 10 7.870 -17.874 15.019 1.00 -0.22 \ ATOM 79 NE2 HIS D 10 8.781 -18.643 15.584 1.00 -0.22 \ ATOM 80 N LEU D 11 5.479 -16.453 21.029 1.00 1.73 \ ATOM 81 CA LEU D 11 4.469 -16.272 22.075 1.00 1.73 \ ATOM 82 C LEU D 11 3.991 -14.837 22.219 1.00 1.73 \ ATOM 83 O LEU D 11 2.809 -14.588 22.458 1.00 1.73 \ ATOM 84 CB LEU D 11 5.015 -16.712 23.430 1.00 1.73 \ ATOM 85 CG LEU D 11 5.182 -18.198 23.709 1.00 1.73 \ ATOM 86 CD1 LEU D 11 6.124 -18.362 24.894 1.00 1.73 \ ATOM 87 CD2 LEU D 11 3.811 -18.824 23.963 1.00 1.73 \ ATOM 88 N VAL D 12 4.924 -13.904 22.101 1.00 0.73 \ ATOM 89 CA VAL D 12 4.607 -12.489 22.227 1.00 0.73 \ ATOM 90 C VAL D 12 3.748 -12.053 21.048 1.00 0.73 \ ATOM 91 O VAL D 12 2.908 -11.165 21.171 1.00 0.73 \ ATOM 92 CB VAL D 12 5.904 -11.651 22.296 1.00 0.73 \ ATOM 93 CG1 VAL D 12 5.586 -10.203 22.507 1.00 0.73 \ ATOM 94 CG2 VAL D 12 6.748 -12.134 23.448 1.00 0.73 \ ATOM 95 N GLU D 13 3.951 -12.706 19.911 1.00 0.67 \ ATOM 96 CA GLU D 13 3.194 -12.406 18.700 1.00 0.67 \ ATOM 97 C GLU D 13 1.778 -12.943 18.856 1.00 0.67 \ ATOM 98 O GLU D 13 0.817 -12.269 18.504 1.00 0.67 \ ATOM 99 CB GLU D 13 3.891 -13.053 17.499 1.00 0.67 \ ATOM 100 CG GLU D 13 3.337 -12.713 16.125 1.00 0.67 \ ATOM 101 CD GLU D 13 4.257 -13.205 15.004 1.00 0.67 \ ATOM 102 OE1 GLU D 13 4.654 -14.393 15.023 1.00 0.67 \ ATOM 103 OE2 GLU D 13 4.587 -12.406 14.104 1.00 0.67 \ ATOM 104 N ALA D 14 1.647 -14.151 19.401 1.00 0.01 \ ATOM 105 CA ALA D 14 0.325 -14.751 19.598 1.00 0.01 \ ATOM 106 C ALA D 14 -0.538 -13.973 20.606 1.00 0.01 \ ATOM 107 O ALA D 14 -1.750 -13.826 20.415 1.00 0.01 \ ATOM 108 CB ALA D 14 0.463 -16.210 20.048 1.00 0.01 \ ATOM 109 N LEU D 15 0.076 -13.484 21.678 1.00 1.73 \ ATOM 110 CA LEU D 15 -0.670 -12.723 22.672 1.00 1.73 \ ATOM 111 C LEU D 15 -1.198 -11.441 22.036 1.00 1.73 \ ATOM 112 O LEU D 15 -2.366 -11.086 22.202 1.00 1.73 \ ATOM 113 CB LEU D 15 0.224 -12.386 23.876 1.00 1.73 \ ATOM 114 CG LEU D 15 0.715 -13.608 24.663 1.00 1.73 \ ATOM 115 CD1 LEU D 15 1.678 -13.176 25.748 1.00 1.73 \ ATOM 116 CD2 LEU D 15 -0.481 -14.349 25.256 1.00 1.73 \ ATOM 117 N TYR D 16 -0.331 -10.752 21.300 1.00 -0.21 \ ATOM 118 CA TYR D 16 -0.711 -9.510 20.643 1.00 -0.21 \ ATOM 119 C TYR D 16 -1.984 -9.690 19.835 1.00 -0.21 \ ATOM 120 O TYR D 16 -2.910 -8.888 19.938 1.00 -0.21 \ ATOM 121 CB TYR D 16 0.426 -9.031 19.739 1.00 -0.21 \ ATOM 122 CG TYR D 16 0.147 -7.768 18.973 1.00 -0.21 \ ATOM 123 CD1 TYR D 16 -0.557 -7.801 17.768 1.00 -0.21 \ ATOM 124 CD2 TYR D 16 0.628 -6.536 19.423 1.00 -0.21 \ ATOM 125 CE1 TYR D 16 -0.767 -6.640 17.021 1.00 -0.21 \ ATOM 126 CE2 TYR D 16 0.422 -5.370 18.688 1.00 -0.21 \ ATOM 127 CZ TYR D 16 -0.273 -5.432 17.483 1.00 -0.21 \ ATOM 128 OH TYR D 16 -0.452 -4.300 16.724 1.00 -0.21 \ ATOM 129 N LEU D 17 -2.027 -10.748 19.033 1.00 -0.22 \ ATOM 130 CA LEU D 17 -3.192 -11.031 18.207 1.00 -0.22 \ ATOM 131 C LEU D 17 -4.425 -11.523 18.976 1.00 -0.22 \ ATOM 132 O LEU D 17 -5.552 -11.301 18.531 1.00 -0.22 \ ATOM 133 CB LEU D 17 -2.829 -12.052 17.112 1.00 -0.22 \ ATOM 134 CG LEU D 17 -2.033 -11.537 15.906 1.00 -0.22 \ ATOM 135 CD1 LEU D 17 -2.744 -10.319 15.339 1.00 -0.22 \ ATOM 136 CD2 LEU D 17 -0.609 -11.166 16.303 1.00 -0.22 \ ATOM 137 N VAL D 18 -4.217 -12.177 20.121 1.00 0.30 \ ATOM 138 CA VAL D 18 -5.328 -12.709 20.924 1.00 0.30 \ ATOM 139 C VAL D 18 -5.916 -11.735 21.948 1.00 0.30 \ ATOM 140 O VAL D 18 -7.115 -11.768 22.233 1.00 0.30 \ ATOM 141 CB VAL D 18 -4.918 -13.999 21.705 1.00 0.30 \ ATOM 142 CG1 VAL D 18 -4.498 -15.096 20.749 1.00 0.30 \ ATOM 143 CG2 VAL D 18 -3.803 -13.688 22.666 1.00 0.30 \ ATOM 144 N CYS D 19 -5.076 -10.875 22.508 1.00 1.73 \ ATOM 145 CA CYS D 19 -5.539 -9.938 23.522 1.00 1.73 \ ATOM 146 C CYS D 19 -6.295 -8.678 23.018 1.00 1.73 \ ATOM 147 O CYS D 19 -7.159 -8.172 23.733 1.00 1.73 \ ATOM 148 CB CYS D 19 -4.352 -9.533 24.417 1.00 1.73 \ ATOM 149 SG CYS D 19 -3.404 -10.892 25.219 1.00 1.73 \ ATOM 155 N GLU D 21 -7.360 -5.036 22.294 1.00 0.20 \ ATOM 156 CA GLU D 21 -7.347 -3.802 23.073 1.00 0.20 \ ATOM 157 C GLU D 21 -6.832 -4.001 24.515 1.00 0.20 \ ATOM 158 O GLU D 21 -6.182 -3.116 25.071 1.00 0.20 \ ATOM 159 CB GLU D 21 -8.774 -3.243 23.105 1.00 0.20 \ ATOM 160 CG GLU D 21 -8.895 -1.729 23.108 1.00 0.20 \ ATOM 161 CD GLU D 21 -10.334 -1.267 22.907 1.00 0.20 \ ATOM 162 OE1 GLU D 21 -11.192 -1.596 23.754 1.00 0.20 \ ATOM 163 OE2 GLU D 21 -10.607 -0.576 21.899 1.00 0.20 \ ATOM 164 N ARG D 22 -7.124 -5.161 25.107 1.00 -0.59 \ ATOM 165 CA ARG D 22 -6.719 -5.480 26.488 1.00 -0.59 \ ATOM 166 C ARG D 22 -5.210 -5.494 26.749 1.00 -0.59 \ ATOM 167 O ARG D 22 -4.759 -5.377 27.895 1.00 -0.59 \ ATOM 168 CB ARG D 22 -7.269 -6.852 26.899 1.00 -0.59 \ ATOM 169 CG ARG D 22 -8.771 -6.996 26.817 1.00 -0.59 \ ATOM 170 CD ARG D 22 -9.219 -8.272 27.511 1.00 -0.59 \ ATOM 171 NE ARG D 22 -8.772 -9.488 26.836 1.00 -0.59 \ ATOM 172 CZ ARG D 22 -8.275 -10.554 27.463 1.00 -0.59 \ ATOM 173 NH1 ARG D 22 -8.147 -10.557 28.787 1.00 -0.59 \ ATOM 174 NH2 ARG D 22 -7.914 -11.628 26.771 1.00 -0.59 \ ATOM 180 N PHE D 24 -1.252 -6.985 26.849 1.00 1.23 \ ATOM 181 CA PHE D 24 -0.680 -8.103 27.596 1.00 1.23 \ ATOM 182 C PHE D 24 0.597 -7.800 28.378 1.00 1.23 \ ATOM 183 O PHE D 24 1.169 -6.716 28.293 1.00 1.23 \ ATOM 184 CB PHE D 24 -0.416 -9.290 26.649 1.00 1.23 \ ATOM 185 CG PHE D 24 0.708 -9.059 25.669 1.00 1.23 \ ATOM 186 CD1 PHE D 24 2.038 -9.193 26.064 1.00 1.23 \ ATOM 187 CD2 PHE D 24 0.438 -8.689 24.359 1.00 1.23 \ ATOM 188 CE1 PHE D 24 3.079 -8.959 25.169 1.00 1.23 \ ATOM 189 CE2 PHE D 24 1.471 -8.453 23.455 1.00 1.23 \ ATOM 190 CZ PHE D 24 2.792 -8.587 23.860 1.00 1.23 \ ATOM 191 N PHE D 25 1.034 -8.791 29.147 1.00 1.16 \ ATOM 192 CA PHE D 25 2.247 -8.676 29.938 1.00 1.16 \ ATOM 193 C PHE D 25 3.173 -9.841 29.618 1.00 1.16 \ ATOM 194 O PHE D 25 2.728 -10.990 29.559 1.00 1.16 \ ATOM 195 CB PHE D 25 1.924 -8.687 31.437 1.00 1.16 \ ATOM 196 CG PHE D 25 1.093 -9.867 31.886 1.00 1.16 \ ATOM 197 CD1 PHE D 25 -0.302 -9.836 31.794 1.00 1.16 \ ATOM 198 CD2 PHE D 25 1.699 -11.002 32.425 1.00 1.16 \ ATOM 199 CE1 PHE D 25 -1.084 -10.917 32.237 1.00 1.16 \ ATOM 200 CE2 PHE D 25 0.925 -12.094 32.872 1.00 1.16 \ ATOM 201 CZ PHE D 25 -0.470 -12.047 32.776 1.00 1.16 \ ATOM 202 N TYR D 26 4.452 -9.552 29.393 1.00 0.53 \ ATOM 203 CA TYR D 26 5.406 -10.613 29.116 1.00 0.53 \ ATOM 204 C TYR D 26 6.589 -10.585 30.074 1.00 0.53 \ ATOM 205 O TYR D 26 7.303 -9.586 30.176 1.00 0.53 \ ATOM 206 CB TYR D 26 5.893 -10.551 27.652 1.00 0.53 \ ATOM 207 CG TYR D 26 6.609 -11.838 27.309 1.00 0.53 \ ATOM 208 CD1 TYR D 26 5.865 -12.943 26.909 1.00 0.53 \ ATOM 209 CD2 TYR D 26 7.986 -11.987 27.451 1.00 0.53 \ ATOM 210 CE1 TYR D 26 6.471 -14.168 26.665 1.00 0.53 \ ATOM 211 CE2 TYR D 26 8.608 -13.212 27.214 1.00 0.53 \ ATOM 212 CZ TYR D 26 7.839 -14.295 26.822 1.00 0.53 \ ATOM 213 OH TYR D 26 8.426 -15.514 26.602 1.00 0.53 \ ATOM 214 N THR D 27 6.793 -11.711 30.752 1.00 -0.39 \ ATOM 215 CA THR D 27 7.857 -11.882 31.741 1.00 -0.39 \ ATOM 216 C THR D 27 8.937 -12.869 31.297 1.00 -0.39 \ ATOM 217 O THR D 27 8.632 -13.928 30.748 1.00 -0.39 \ ATOM 218 CB THR D 27 7.297 -12.464 33.048 1.00 -0.39 \ ATOM 219 OG1 THR D 27 7.202 -13.889 32.914 1.00 -0.39 \ ATOM 220 CG2 THR D 27 5.902 -11.922 33.334 1.00 -0.39 \ ATOM 221 N LYS D 28 10.194 -12.531 31.559 1.00 -0.99 \ ATOM 222 CA LYS D 28 11.306 -13.423 31.244 1.00 -0.99 \ ATOM 223 C LYS D 28 11.806 -13.956 32.589 1.00 -0.99 \ ATOM 224 O LYS D 28 12.596 -13.301 33.268 1.00 -0.99 \ ATOM 225 CB LYS D 28 12.428 -12.666 30.527 1.00 -0.99 \ ATOM 226 CG LYS D 28 12.238 -12.520 29.016 1.00 -0.99 \ ATOM 227 CD LYS D 28 13.142 -13.479 28.239 1.00 -0.99 \ ATOM 228 CE LYS D 28 13.016 -13.280 26.727 1.00 -0.99 \ ATOM 229 NZ LYS D 28 13.956 -14.131 25.926 1.00 -0.99 \ ATOM 230 N PRO D 29 11.339 -15.153 32.993 1.00 -0.77 \ ATOM 231 CA PRO D 29 11.703 -15.817 34.253 1.00 -0.77 \ ATOM 232 C PRO D 29 13.160 -16.262 34.397 1.00 -0.77 \ ATOM 233 O PRO D 29 13.431 -17.445 34.611 1.00 -0.77 \ ATOM 234 CB PRO D 29 10.742 -17.001 34.304 1.00 -0.77 \ ATOM 235 CG PRO D 29 10.615 -17.367 32.858 1.00 -0.77 \ ATOM 236 CD PRO D 29 10.426 -16.006 32.208 1.00 -0.77 \ ATOM 237 N THR D 30 14.088 -15.314 34.295 1.00 -1.00 \ ATOM 238 CA THR D 30 15.519 -15.599 34.423 1.00 -1.00 \ ATOM 239 C THR D 30 15.933 -16.760 33.518 1.00 -1.00 \ ATOM 240 O THR D 30 15.085 -17.234 32.735 1.00 -1.00 \ ATOM 241 CB THR D 30 15.909 -15.945 35.897 1.00 -1.00 \ ATOM 242 OG1 THR D 30 15.394 -14.943 36.785 1.00 -1.00 \ ATOM 243 CG2 THR D 30 17.429 -15.989 36.057 1.00 -1.00 \ ATOM 244 OXT THR D 30 17.107 -17.179 33.594 1.00 -1.00 \ """, "e3rovD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3rovD1_csv", state=0, origin=1) cmd.zoom("e3rovD1_csv", animate=-1)